CLTA 33885

Name: CLTA	Sequence: fasta or formatted (248aa)		NCBI GI: 6005993
Description: clathrin, light polypeptide A isoform b		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [236aa] clathrin, light polypeptide A isoform c alt prot [218aa] clathrin, light polypeptide A isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.3 33 3 C cysteine 0.8 2 1 D aspartate 6.5 16 1 E glutamate 12.1 30 2 F phenylalanine 2.8 7 1 G glycine 8.1 20 2 H histidine 1.2 3 1 I isoleucine 4.0 10 1 K lysine 4.8 12 1 L leucine 5.6 14 1 M methionine 1.6 4 1 N asparagine 4.4 11 2 P proline 7.3 18 2 Q glutamine 6.0 15 2 R arginine 4.4 11 1 S serine 6.0 15 2 T threonine 1.6 4 1 V valine 4.8 12 1 W tryptophan 1.6 4 1 Y tyrosine 2.8 7 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 clathrin, light polypeptide A isoform b CLTA 0.925 clathrin, light polypeptide A isoform c CLTA 0.835 clathrin, light polypeptide A isoform a CLTB 0.510 clathrin, light polypeptide isoform b CLTB 0.435 clathrin, light polypeptide isoform a RDX 0.027 radixin RNF169 0.027 ring finger protein 169 PRR12 0.027 proline rich 12 LOC400352 0.025 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.025 PREDICTED: similar to Putative golgin subfamily A m... GNL3L 0.025 guanine nucleotide binding protein-like 3 (nucleolar)... MSN 0.025 moesin GOLGA6D 0.023 golgi autoantigen, golgin subfamily a, 6D GOLGA6C 0.023 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... ZRSR2 0.023 U2 small nuclear RNA auxiliary factor 1-like 2 GOLGA6 0.023 golgi autoantigen, golgin subfamily a, 6 NXF2B 0.021 nuclear RNA export factor 2B NXF2 0.021 nuclear RNA export factor 2 NXF2 0.021 nuclear RNA export factor 2 BSN 0.021 bassoon protein COL4A6 0.021 type IV alpha 6 collagen isoform A precursor COL4A6 0.021 type IV alpha 6 collagen isoform B precursor GOLGA6B 0.021 golgi autoantigen, golgin subfamily a, 6B EIF5B 0.021 eukaryotic translation initiation factor 5B LOC727832 0.021 golgi autoantigen, golgin subfamily a-like OTUD5 0.021 OTU domain containing 5 isoform a OTUD5 0.021 OTU domain containing 5 isoform b OTUD5 0.021 OTU domain containing 5 isoform b LOC100133758 0.019 PREDICTED: hypothetical protein, partial LOC100133220 0.019 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.