CLTB 28457

Name: CLTB	Sequence: fasta or formatted (211aa)		NCBI GI: 4502901
Description: clathrin, light polypeptide isoform a		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [229aa] clathrin, light polypeptide isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.8 27 3 C cysteine 0.9 2 1 D aspartate 5.7 12 2 E glutamate 13.7 29 2 F phenylalanine 3.8 8 2 G glycine 6.6 14 1 H histidine 0.5 1 1 I isoleucine 2.4 5 1 K lysine 7.1 15 2 L leucine 4.7 10 1 M methionine 1.4 3 1 N asparagine 3.8 8 2 P proline 5.2 11 1 Q glutamine 7.1 15 2 R arginine 5.2 11 1 S serine 9.0 19 3 T threonine 3.8 8 2 V valine 3.8 8 1 W tryptophan 1.9 4 1 Y tyrosine 0.5 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 clathrin, light polypeptide isoform a CLTB 0.972 clathrin, light polypeptide isoform b CLTA 0.565 clathrin, light polypeptide A isoform a CLTA 0.538 clathrin, light polypeptide A isoform c CLTA 0.525 clathrin, light polypeptide A isoform b LOC727832 0.043 golgi autoantigen, golgin subfamily a-like MAP9 0.043 aster-associated protein ZRSR2 0.043 U2 small nuclear RNA auxiliary factor 1-like 2 DDX46 0.040 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 GLE1 0.038 GLE1 RNA export mediator homolog isoform 1 GLE1 0.038 GLE1 RNA export mediator homolog isoform 2 PPP1R12B 0.038 protein phosphatase 1, regulatory (inhibitor) subuni... PPP1R12B 0.038 protein phosphatase 1, regulatory (inhibitor) subunit... FAM184A 0.038 hypothetical protein LOC79632 isoform 2 FAM184A 0.038 hypothetical protein LOC79632 isoform 1 GIGYF2 0.035 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.035 GRB10 interacting GYF protein 2 isoform a GIGYF2 0.035 GRB10 interacting GYF protein 2 isoform b GIGYF2 0.035 GRB10 interacting GYF protein 2 isoform b PAWR 0.035 PRKC, apoptosis, WT1, regulator MSN 0.035 moesin UPF3B 0.035 UPF3 regulator of nonsense transcripts homolog B iso... LEO1 0.035 Leo1, Paf1/RNA polymerase II complex component, homo... LOC440243 0.035 PREDICTED: Putative golgin subfamily A member 6-lik... FHAD1 0.035 forkhead-associated (FHA) phosphopeptide binding do... LOC400352 0.033 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.033 PREDICTED: similar to Putative golgin subfamily A m... TCHH 0.033 trichohyalin C19orf26 0.033 downstream of Stk11 AP3B1 0.030 adaptor-related protein complex 3, beta 1 subunit [H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.