RNF40 35912

Name: RNF40	Sequence: fasta or formatted (1001aa)		NCBI GI: 7662230
Description: ring finger protein 40		Referenced in: Ring Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 85 2 C cysteine 1.3 13 2 D aspartate 4.0 40 2 E glutamate 14.0 140 3 F phenylalanine 1.6 16 1 G glycine 5.4 54 2 H histidine 1.9 19 2 I isoleucine 2.7 27 1 K lysine 7.7 77 2 L leucine 12.1 121 3 M methionine 1.9 19 1 N asparagine 2.6 26 1 P proline 3.9 39 3 Q glutamine 6.9 69 2 R arginine 8.9 89 2 S serine 6.3 63 3 T threonine 4.3 43 6 V valine 4.5 45 2 W tryptophan 0.2 2 1 Y tyrosine 1.4 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ring finger protein 40 RNF20 0.546 ring finger protein 20 ERC1 0.044 RAB6-interacting protein 2 isoform epsilon MYH1 0.043 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH7B 0.043 myosin, heavy polypeptide 7B, cardiac muscle, beta ... GOLGA3 0.043 Golgi autoantigen, golgin subfamily a, 3 CROCC 0.043 ciliary rootlet coiled-coil PLEC1 0.042 plectin 1 isoform 11 PLEC1 0.042 plectin 1 isoform 10 PLEC1 0.042 plectin 1 isoform 8 PLEC1 0.042 plectin 1 isoform 7 PLEC1 0.042 plectin 1 isoform 6 PLEC1 0.042 plectin 1 isoform 3 PLEC1 0.042 plectin 1 isoform 2 PLEC1 0.042 plectin 1 isoform 1 GOLGB1 0.041 golgi autoantigen, golgin subfamily b, macrogolgin ... MYH7 0.040 myosin, heavy chain 7, cardiac muscle, beta FYCO1 0.040 FYVE and coiled-coil domain containing 1 EEA1 0.040 early endosome antigen 1, 162kD MYH10 0.039 myosin, heavy polypeptide 10, non-muscle MYH14 0.039 myosin, heavy chain 14 isoform 1 MYH14 0.039 myosin, heavy chain 14 isoform 2 MYH14 0.039 myosin, heavy chain 14 isoform 3 MYH3 0.039 myosin, heavy chain 3, skeletal muscle, embryonic [H... ERC1 0.038 RAB6-interacting protein 2 isoform delta MYH9 0.038 myosin, heavy polypeptide 9, non-muscle MYH13 0.037 myosin, heavy polypeptide 13, skeletal muscle [Homo... MYH6 0.037 myosin heavy chain 6 MYH11 0.036 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.036 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.