CLTA 1579

Name: CLTA	Sequence: fasta or formatted (236aa)		NCBI GI: 115527060
Description: clathrin, light polypeptide A isoform c		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [218aa] clathrin, light polypeptide A isoform a alt prot [248aa] clathrin, light polypeptide A isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.0 33 3 C cysteine 0.4 1 1 D aspartate 6.8 16 1 E glutamate 12.3 29 2 F phenylalanine 3.0 7 1 G glycine 8.5 20 2 H histidine 0.8 2 1 I isoleucine 3.8 9 1 K lysine 5.1 12 1 L leucine 5.5 13 1 M methionine 1.7 4 1 N asparagine 3.8 9 2 P proline 7.2 17 2 Q glutamine 5.9 14 2 R arginine 4.7 11 1 S serine 5.9 14 2 T threonine 1.3 3 1 V valine 5.1 12 1 W tryptophan 1.7 4 1 Y tyrosine 2.5 6 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 clathrin, light polypeptide A isoform c CLTA 0.980 clathrin, light polypeptide A isoform b CLTA 0.896 clathrin, light polypeptide A isoform a CLTB 0.561 clathrin, light polypeptide isoform b CLTB 0.472 clathrin, light polypeptide isoform a RDX 0.029 radixin RNF169 0.029 ring finger protein 169 PRR12 0.029 proline rich 12 LOC400352 0.026 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.026 PREDICTED: similar to Putative golgin subfamily A m... LOC440243 0.026 PREDICTED: Putative golgin subfamily A member 6-lik... MSN 0.026 moesin GOLGA6D 0.024 golgi autoantigen, golgin subfamily a, 6D GOLGA6C 0.024 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... ZRSR2 0.024 U2 small nuclear RNA auxiliary factor 1-like 2 GOLGA6 0.024 golgi autoantigen, golgin subfamily a, 6 NXF2B 0.022 nuclear RNA export factor 2B NXF2 0.022 nuclear RNA export factor 2 NXF2 0.022 nuclear RNA export factor 2 COL4A6 0.022 type IV alpha 6 collagen isoform A precursor RNF168 0.022 ring finger protein 168 COL4A6 0.022 type IV alpha 6 collagen isoform B precursor GOLGA6B 0.022 golgi autoantigen, golgin subfamily a, 6B EIF5B 0.022 eukaryotic translation initiation factor 5B LOC727832 0.022 golgi autoantigen, golgin subfamily a-like LOC283767 0.022 golgi autoantigen, golgin subfamily a-like CENPJ 0.022 centromere protein J OTUD5 0.022 OTU domain containing 5 isoform a OTUD5 0.022 OTU domain containing 5 isoform b LOC100133758 0.020 PREDICTED: hypothetical protein, partial Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.