Guide to the Human Genome
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Name: KRTAP27-1 Sequence: fasta or formatted (207aa) NCBI GI: 118200354
Description:

keratin associated protein 27-1

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3          9           1
 C cysteine            9.2         19           2
 D aspartate           2.4          5           2
 E glutamate           6.3         13           1
 F phenylalanine       4.3          9           1
 G glycine             3.9          8           2
 H histidine           2.9          6           1
 I isoleucine          1.0          2           1
 K lysine              2.4          5           1
 L leucine             6.3         13           2
 M methionine          1.4          3           1
 N asparagine          5.3         11           1
 P proline             8.7         18           2
 Q glutamine           8.7         18           2
 R arginine            3.4          7           1
 S serine             16.4         34           3
 T threonine           8.2         17           2
 V valine              4.3          9           2
 W tryptophan          0.0          0           0
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 27-1 
KRTAP26-1             0.096   keratin associated protein 26-1 
KRTAP4-9              0.094   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-9              0.089   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP11-1             0.089   keratin associated protein 11-1 
KRTAP4-9              0.087   keratin associated protein 4-9 
LOC100131696          0.084   PREDICTED: keratin associated protein 
KRTAP4-11             0.075   keratin associated protein 4-11 
KRTAP10-5             0.072   keratin associated protein 10-5 
KRTAP10-1             0.072   keratin associated protein 10-1 
KRTAP10-8             0.070   keratin associated protein 10-8 
LOC100130599          0.070   PREDICTED: hypothetical protein 
LOC100130599          0.070   PREDICTED: similar to Keratin-associated protein 10...
LOC100131696          0.067   PREDICTED: keratin associated protein 
LOC100288060          0.067   PREDICTED: hypothetical protein XP_002343557 
KRTAP4-8              0.065   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.065   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-4              0.065   keratin associated protein 4.4 
KRTAP4-8              0.065   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.065   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.065   PREDICTED: similar to keratin associated protein 4-...
KRTAP10-9             0.065   keratin associated protein 10-9 
KRTAP10-12            0.062   keratin associated protein 10-12 
KRTAP4-8              0.062   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.062   keratin associated protein 4.8 
KRTAP4-8              0.058   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.058   PREDICTED: similar to keratin associated protein 4-...
KRTAP10-4             0.058   keratin associated protein 10-4 
KRTAP10-11            0.058   keratin associated protein 10-11 
KRTAP4-12             0.058   keratin associated protein 4-12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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