LIMS1 3444

Name: LIMS1	Sequence: fasta or formatted (325aa)		NCBI GI: 13518026
Description: LIM and senescent cell antigen-like domains 1		Referenced in: LIM Domain Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 24 1 C cysteine 10.2 33 2 D aspartate 3.4 11 1 E glutamate 8.0 26 1 F phenylalanine 6.5 21 1 G glycine 6.8 22 2 H histidine 4.9 16 1 I isoleucine 3.7 12 2 K lysine 8.9 29 2 L leucine 7.4 24 1 M methionine 1.8 6 1 N asparagine 5.2 17 2 P proline 4.3 14 1 Q glutamine 3.4 11 2 R arginine 5.2 17 2 S serine 1.5 5 1 T threonine 2.2 7 1 V valine 5.2 17 2 W tryptophan 0.9 3 1 Y tyrosine 3.1 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LIM and senescent cell antigen-like domains 1 LIMS2 0.882 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.882 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.882 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.882 LIM and senescent cell antigen-like domains 2 isofor... LOC100288695 0.500 PREDICTED: hypothetical protein XP_002342298 LOC100293468 0.263 PREDICTED: similar to LIM and senescent cell antige... PXN 0.178 paxillin isoform 3 PXN 0.178 paxillin isoform 2 PXN 0.178 paxillin isoform 1 LPXN 0.165 leupaxin isoform 1 LPXN 0.165 leupaxin isoform 2 TGFB1I1 0.158 transforming growth factor beta 1 induced transcrip... TGFB1I1 0.158 transforming growth factor beta 1 induced transcript... PDLIM7 0.147 PDZ and LIM domain 7 isoform 2 PDLIM7 0.147 PDZ and LIM domain 7 isoform 1 PDLIM5 0.147 PDZ and LIM domain 5 isoform b PDLIM5 0.147 PDZ and LIM domain 5 isoform a FHL1 0.136 four and a half LIM domains 1 isoform 2 FHL1 0.136 four and a half LIM domains 1 isoform 2 FHL1 0.136 four and a half LIM domains 1 isoform 3 FHL1 0.136 four and a half LIM domains 1 isoform 5 FHL1 0.136 four and a half LIM domains 1 isoform 2 FHL2 0.136 four and a half LIM domains 2 FHL2 0.136 four and a half LIM domains 2 FHL2 0.136 four and a half LIM domains 2 FHL2 0.136 four and a half LIM domains 2 FHL3 0.132 four and a half LIM domains 3 LIMS3 0.126 LIM and senescent cell antigen-like domains 3 ABLIM1 0.124 actin-binding LIM protein 1 isoform c Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.