TGFB1I1 13000

Name: TGFB1I1	Sequence: fasta or formatted (444aa)		NCBI GI: 21361591
Description: transforming growth factor beta 1 induced transcript 1 isoform 2		Referenced in: LIM Domain Proteins Nuclear Receptors TGF-beta Family Non-Receptor Tyrosine Kinase Pathways
Other entries for this name: alt prot [461aa] transforming growth factor beta 1 induced transcript 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 29 2 C cysteine 6.1 27 2 D aspartate 3.6 16 1 E glutamate 5.9 26 1 F phenylalanine 6.3 28 2 G glycine 9.9 44 2 H histidine 3.6 16 1 I isoleucine 1.4 6 1 K lysine 3.8 17 2 L leucine 8.3 37 2 M methionine 1.1 5 1 N asparagine 1.8 8 1 P proline 10.8 48 3 Q glutamine 4.1 18 1 R arginine 6.1 27 2 S serine 10.4 46 4 T threonine 5.0 22 1 V valine 3.4 15 2 W tryptophan 0.7 3 1 Y tyrosine 1.4 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transforming growth factor beta 1 induced transcript... TGFB1I1 1.000 transforming growth factor beta 1 induced transcrip... PXN 0.439 paxillin isoform 2 PXN 0.438 paxillin isoform 1 PXN 0.424 paxillin isoform 3 LPXN 0.379 leupaxin isoform 2 LPXN 0.376 leupaxin isoform 1 LDB3 0.158 LIM domain binding 3 isoform 2 LDB3 0.158 LIM domain binding 3 isoform 1 PDLIM5 0.155 PDZ and LIM domain 5 isoform b PDLIM5 0.155 PDZ and LIM domain 5 isoform a PDLIM7 0.153 PDZ and LIM domain 7 isoform 1 PDLIM7 0.151 PDZ and LIM domain 7 isoform 2 LIMS2 0.119 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.119 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.119 LIM and senescent cell antigen-like domains 2 isofo... LIMS2 0.119 LIM and senescent cell antigen-like domains 2 isofor... LIMS1 0.118 LIM and senescent cell antigen-like domains 1 ZYX 0.104 zyxin ZYX 0.104 zyxin FBLIM1 0.103 filamin-binding LIM protein-1 isoform a FHL3 0.102 four and a half LIM domains 3 ABLIM3 0.097 actin binding LIM protein family, member 3 ABLIM1 0.096 actin-binding LIM protein 1 isoform c ABLIM1 0.096 actin-binding LIM protein 1 isoform b ABLIM1 0.096 actin-binding LIM protein 1 isoform a FBLIM1 0.094 filamin-binding LIM protein-1 isoform c FHL5 0.094 activator of cAMP-responsive element modulator (CREM... FHL2 0.094 four and a half LIM domains 2 FHL2 0.094 four and a half LIM domains 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.