Guide to the Human Genome
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Name: BTBD6 Sequence: fasta or formatted (485aa) NCBI GI: 225543407
Description:

BTB domain protein BDPL

Referenced in:

Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.2         59           4
 C cysteine            2.3         11           2
 D aspartate           3.5         17           1
 E glutamate           7.4         36           2
 F phenylalanine       4.7         23           1
 G glycine             6.0         29           2
 H histidine           1.6          8           1
 I isoleucine          3.7         18           2
 K lysine              3.9         19           2
 L leucine             9.3         45           2
 M methionine          1.9          9           1
 N asparagine          3.7         18           2
 P proline             6.4         31           4
 Q glutamine           4.1         20           1
 R arginine            5.8         28           2
 S serine              6.6         32           3
 T threonine           5.4         26           1
 V valine              6.8         33           2
 W tryptophan          1.2          6           1
 Y tyrosine            3.5         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BTB domain protein BDPL 
BTBD3                 0.709   BTB/POZ domain containing protein 3 isoform a 
BTBD3                 0.709   BTB/POZ domain containing protein 3 isoform b 
BTBD2                 0.399   BTB (POZ) domain containing 2 
BTBD1                 0.375   BTB (POZ) domain containing 1 isoform 1 
BTBD1                 0.279   BTB (POZ) domain containing 1 isoform 2 
BTBD9                 0.082   BTB (POZ) domain containing 9 isoform a 
BTBD9                 0.082   BTB (POZ) domain containing 9 isoform a 
KBTBD10               0.065   kelch repeat and BTB (POZ) domain containing 10 [Hom...
BTBD9                 0.062   BTB (POZ) domain containing 9 isoform b 
LOC149478             0.060   hypothetical protein LOC149478 
KBTBD5                0.058   kelch repeat and BTB (POZ) domain containing 5 [Homo...
KLHL10                0.057   kelch-like 10 
KLHL7                 0.055   kelch-like 7 isoform 1 
KLHL7                 0.055   kelch-like 7 isoform 2 
ENC1                  0.053   ectodermal-neural cortex (with BTB-like domain) [Homo...
KEAP1                 0.053   kelch-like ECH-associated protein 1 
KEAP1                 0.053   kelch-like ECH-associated protein 1 
KBTBD2                0.053   kelch repeat and BTB (POZ) domain containing 2 [Hom...
KLHL20                0.053   kelch-like 20 
KLHL30                0.048   kelch-like 30 
KLHL28                0.048   BTB (POZ) domain containing 5 
KLHL17                0.047   kelch-like 17 
KLHL38                0.045   kelch-like 38 
KLHL25                0.045   BTB/POZ KELCH domain protein 
KLHL8                 0.044   kelch-like 8 
MYCBP2                0.044   MYC binding protein 2 
KLHL3                 0.044   kelch-like 3 
KLHL18                0.042   kelch-like 18 
KBTBD8                0.041   T-cell activation kelch repeat protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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