Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: BTBD3 Sequence: fasta or formatted (461aa) NCBI GI: 31317209
Description:

BTB/POZ domain containing protein 3 isoform b

Referenced in:

Additional Interaction Domain Families

Other entries for this name:
alt prot [522aa] BTB/POZ domain containing protein 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         44           2
 C cysteine            2.8         13           1
 D aspartate           5.0         23           2
 E glutamate           6.3         29           2
 F phenylalanine       5.4         25           1
 G glycine             6.1         28           2
 H histidine           1.3          6           1
 I isoleucine          5.0         23           1
 K lysine              4.8         22           2
 L leucine             9.3         43           2
 M methionine          1.7          8           2
 N asparagine          4.8         22           3
 P proline             4.1         19           2
 Q glutamine           5.9         27           2
 R arginine            4.6         21           2
 S serine              6.9         32           3
 T threonine           4.3         20           1
 V valine              6.7         31           2
 W tryptophan          1.3          6           1
 Y tyrosine            4.1         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BTB/POZ domain containing protein 3 isoform b 
BTBD3                 1.000   BTB/POZ domain containing protein 3 isoform a 
BTBD6                 0.743   BTB domain protein BDPL 
BTBD2                 0.396   BTB (POZ) domain containing 2 
BTBD1                 0.376   BTB (POZ) domain containing 1 isoform 1 
BTBD1                 0.279   BTB (POZ) domain containing 1 isoform 2 
BTBD9                 0.084   BTB (POZ) domain containing 9 isoform a 
BTBD9                 0.084   BTB (POZ) domain containing 9 isoform a 
KBTBD10               0.063   kelch repeat and BTB (POZ) domain containing 10 [Hom...
LOC149478             0.061   hypothetical protein LOC149478 
BTBD9                 0.061   BTB (POZ) domain containing 9 isoform b 
KLHL7                 0.053   kelch-like 7 isoform 1 
KLHL7                 0.053   kelch-like 7 isoform 2 
KBTBD5                0.052   kelch repeat and BTB (POZ) domain containing 5 [Homo...
KEAP1                 0.052   kelch-like ECH-associated protein 1 
KEAP1                 0.052   kelch-like ECH-associated protein 1 
KLHL8                 0.052   kelch-like 8 
KBTBD2                0.050   kelch repeat and BTB (POZ) domain containing 2 [Hom...
KLHL28                0.050   BTB (POZ) domain containing 5 
KLHL10                0.048   kelch-like 10 
KLHL3                 0.047   kelch-like 3 
KLHL2                 0.046   kelch-like 2, Mayven isoform 2 
KLHL2                 0.046   kelch-like 2, Mayven isoform 1 
ENC1                  0.046   ectodermal-neural cortex (with BTB-like domain) [Homo...
KLHL38                0.045   kelch-like 38 
KLHL5                 0.045   kelch-like 5 isoform 3 
KLHL5                 0.045   kelch-like 5 isoform 1 
KBTBD3                0.044   BTB and kelch domain containing 3 
KBTBD3                0.044   BTB and kelch domain containing 3 
KLHL4                 0.043   kelch-like 4 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press