ACAN 2836

Name: ACAN	Sequence: fasta or formatted (2317aa)		NCBI GI: 126090883
Description: aggrecan isoform 1 precursor		Referenced in: Bone and Related Tissues Protein Glycosylation Extracellular Matrix
Other entries for this name: alt prot [2416aa] aggrecan isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 161 2 C cysteine 1.0 24 1 D aspartate 4.6 106 1 E glutamate 11.0 255 3 F phenylalanine 2.8 66 2 G glycine 12.2 282 2 H histidine 1.2 28 2 I isoleucine 3.3 77 2 K lysine 1.1 25 2 L leucine 7.8 181 2 M methionine 0.5 12 1 N asparagine 1.2 28 3 P proline 9.0 209 2 Q glutamine 2.5 58 2 R arginine 3.2 73 2 S serine 12.7 294 3 T threonine 8.2 190 3 V valine 7.7 178 3 W tryptophan 1.0 24 1 Y tyrosine 2.0 46 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 aggrecan isoform 1 precursor ACAN 0.985 aggrecan isoform 2 precursor BCAN 0.075 brevican isoform 2 BCAN 0.075 brevican isoform 1 VCAN 0.073 versican isoform 1 VCAN 0.073 versican isoform 2 NCAN 0.066 chondroitin sulfate proteoglycan 3 HAPLN3 0.043 hyaluronan and proteoglycan link protein 3 HAPLN1 0.041 hyaluronan and proteoglycan link protein 1 HAPLN2 0.036 brain link protein-1 HAPLN4 0.036 hyaluronan and proteoglycan link protein 4 COL3A1 0.027 collagen type III alpha 1 preproprotein COL4A1 0.025 alpha 1 type IV collagen preproprotein COL4A6 0.025 type IV alpha 6 collagen isoform A precursor COL4A6 0.025 type IV alpha 6 collagen isoform B precursor COL5A2 0.023 alpha 2 type V collagen preproprotein MUC4 0.022 mucin 4 isoform a COL4A5 0.022 type IV collagen alpha 5 isoform 1 precursor COL4A5 0.022 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.022 type IV collagen alpha 5 isoform 3 precursor COL4A3 0.021 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.021 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.021 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.021 alpha 3 type IV collagen isoform 1 precursor MRC2 0.021 mannose receptor, C type 2 COL5A3 0.021 collagen, type V, alpha 3 preproprotein MUC12 0.020 PREDICTED: mucin 12 COL4A2 0.020 alpha 2 type IV collagen preproprotein COL24A1 0.020 collagen, type XXIV, alpha 1 COL7A1 0.020 alpha 1 type VII collagen precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.