HAPLN1 28487

Name: HAPLN1	Sequence: fasta or formatted (354aa)		NCBI GI: 4503053
Description: hyaluronan and proteoglycan link protein 1		Referenced in: Bone and Related Tissues Additional Brain Proteins Extracellular Matrix
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 25 2 C cysteine 3.1 11 1 D aspartate 8.2 29 2 E glutamate 3.4 12 1 F phenylalanine 5.1 18 1 G glycine 8.8 31 2 H histidine 2.8 10 1 I isoleucine 4.5 16 1 K lysine 5.6 20 2 L leucine 8.8 31 4 M methionine 0.6 2 1 N asparagine 3.4 12 1 P proline 4.0 14 1 Q glutamine 3.7 13 2 R arginine 5.9 21 3 S serine 5.1 18 1 T threonine 4.2 15 1 V valine 7.3 26 3 W tryptophan 2.3 8 1 Y tyrosine 6.2 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hyaluronan and proteoglycan link protein 1 HAPLN3 0.482 hyaluronan and proteoglycan link protein 3 HAPLN4 0.452 hyaluronan and proteoglycan link protein 4 HAPLN2 0.397 brain link protein-1 BCAN 0.274 brevican isoform 2 BCAN 0.274 brevican isoform 1 VCAN 0.264 versican isoform 2 VCAN 0.264 versican isoform 1 ACAN 0.258 aggrecan isoform 2 precursor ACAN 0.258 aggrecan isoform 1 precursor NCAN 0.255 chondroitin sulfate proteoglycan 3 STAB1 0.056 stabilin 1 precursor STAB2 0.055 stabilin 2 precursor TNFAIP6 0.052 tumor necrosis factor, alpha-induced protein 6 precu... GPA33 0.028 transmembrane glycoprotein A33 precursor LYVE1 0.025 lymphatic vessel endothelial hyaluronan receptor 1 [... CXADR 0.021 coxsackie virus and adenovirus receptor precursor [Ho... VSIG4 0.019 V-set and immunoglobulin domain containing 4 isofor... VSIG4 0.019 V-set and immunoglobulin domain containing 4 isoform ... PVRL3 0.019 poliovirus receptor-related 3 VSIG8 0.014 V-set and immunoglobulin domain containing 8 SCN3B 0.011 voltage-gated sodium channel beta-3 subunit precursor... SCN3B 0.011 voltage-gated sodium channel beta-3 subunit precurso... AMICA1 0.011 adhesion molecule, interacts with CXADR antigen 1 i... AMICA1 0.011 adhesion molecule, interacts with CXADR antigen 1 i... ERMAP 0.010 erythroblast membrane-associated protein precursor [... ERMAP 0.010 erythroblast membrane-associated protein precursor [... TTN 0.010 titin isoform N2-A TTN 0.010 titin isoform novex-2 TTN 0.010 titin isoform novex-1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.