HAPLN4 25302

Name: HAPLN4	Sequence: fasta or formatted (402aa)		NCBI GI: 30794472
Description: hyaluronan and proteoglycan link protein 4		Referenced in: Additional Brain Proteins Extracellular Matrix
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.9 56 3 C cysteine 2.7 11 1 D aspartate 5.0 20 2 E glutamate 3.7 15 2 F phenylalanine 3.2 13 2 G glycine 15.2 61 4 H histidine 2.5 10 1 I isoleucine 0.7 3 1 K lysine 2.2 9 2 L leucine 8.7 35 3 M methionine 0.5 2 1 N asparagine 2.2 9 1 P proline 6.5 26 1 Q glutamine 3.0 12 1 R arginine 9.0 36 2 S serine 3.0 12 1 T threonine 3.2 13 1 V valine 8.0 32 3 W tryptophan 3.2 13 1 Y tyrosine 3.5 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hyaluronan and proteoglycan link protein 4 HAPLN1 0.396 hyaluronan and proteoglycan link protein 1 HAPLN3 0.381 hyaluronan and proteoglycan link protein 3 HAPLN2 0.315 brain link protein-1 NCAN 0.238 chondroitin sulfate proteoglycan 3 BCAN 0.222 brevican isoform 2 BCAN 0.222 brevican isoform 1 VCAN 0.204 versican isoform 2 VCAN 0.200 versican isoform 1 ACAN 0.198 aggrecan isoform 2 precursor ACAN 0.198 aggrecan isoform 1 precursor TNFAIP6 0.064 tumor necrosis factor, alpha-induced protein 6 precu... STAB1 0.053 stabilin 1 precursor STAB2 0.046 stabilin 2 precursor ZSWIM6 0.021 zinc finger, SWIM-type containing 6 LYVE1 0.021 lymphatic vessel endothelial hyaluronan receptor 1 [... VSIG4 0.021 V-set and immunoglobulin domain containing 4 isofor... VSIG4 0.021 V-set and immunoglobulin domain containing 4 isoform ... NCAM2 0.021 neural cell adhesion molecule 2 precursor IGSF11 0.021 immunoglobulin superfamily, member 11 isoform b [Hom... IGSF11 0.018 immunoglobulin superfamily, member 11 isoform a [Hom... GPA33 0.017 transmembrane glycoprotein A33 precursor VSIG1 0.017 V-set and immunoglobulin domain containing 1 IGSF3 0.016 immunoglobulin superfamily, member 3 isoform 1 [Homo... IGSF3 0.016 immunoglobulin superfamily, member 3 isoform 2 [Homo... LRRC4B 0.014 leucine rich repeat containing 4B F11R 0.012 F11 receptor precursor HAVCR2 0.012 T cell immunoglobulin mucin 3 LRIG1 0.012 leucine-rich repeats and immunoglobulin-like domains... CD300LG 0.012 CD300 molecule-like family member g Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.