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Search of human proteins with 41281943
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|41281943 hypothetical protein LOC753 isoform alpha 1 [Homo
sapiens]
(306 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|41281943 hypothetical protein LOC753 isoform alpha 1 [Homo sa... 638 0.0
gi|41281957 hypothetical protein LOC753 isoform alpha 2 [Homo sa... 589 e-168
gi|4757884 hypothetical protein LOC753 isoform beta 1 [Homo sapi... 506 e-143
gi|51093708 hypothetical protein LOC753 isoform gamma 1 [Homo sa... 506 e-143
gi|41281948 hypothetical protein LOC753 isoform beta 2 [Homo sap... 456 e-129
gi|51093710 hypothetical protein LOC753 isoform gamma 2 [Homo sa... 456 e-129
gi|40317616 transmembrane prostate androgen-induced protein isof... 326 2e-89
gi|21361841 transmembrane prostate androgen-induced protein isof... 326 2e-89
gi|40317620 transmembrane prostate androgen-induced protein isof... 305 3e-83
gi|40317618 transmembrane prostate androgen-induced protein isof... 305 3e-83
gi|208973262 low density lipoprotein-related protein 12 isoform ... 49 4e-06
gi|7305525 low density lipoprotein-related protein 12 isoform a ... 49 4e-06
gi|189242612 complement component 6 precursor [Homo sapiens] 46 5e-05
gi|169636415 complement component 6 precursor [Homo sapiens] 46 5e-05
gi|126012573 low density lipoprotein-related protein 2 [Homo sap... 45 8e-05
gi|28557796 low density lipoprotein receptor class A domain cont... 44 1e-04
gi|126012562 low density lipoprotein-related protein 1 [Homo sap... 44 2e-04
gi|157384998 low density lipoprotein receptor-related protein 4 ... 43 3e-04
gi|167555125 low density lipoprotein receptor-related protein 3 ... 42 5e-04
gi|29244926 corin [Homo sapiens] 42 5e-04
gi|93102379 low density lipoprotein-related protein 1B precursor... 42 7e-04
gi|65301164 very low density lipoprotein receptor isoform b [Hom... 42 9e-04
gi|65301167 very low density lipoprotein receptor isoform a [Hom... 42 9e-04
gi|4502511 complement component 9 precursor [Homo sapiens] 41 0.002
gi|148727288 low density lipoprotein receptor-related protein 6 ... 40 0.003
gi|134031945 SCO-spondin [Homo sapiens] 40 0.003
gi|4504975 low density lipoprotein receptor precursor [Homo sapi... 39 0.004
gi|11415040 matriptase [Homo sapiens] 39 0.004
gi|61744471 low density lipoprotein receptor-related protein 8 i... 39 0.008
gi|65301119 low density lipoprotein receptor-related protein 8 i... 39 0.008
>gi|41281943 hypothetical protein LOC753 isoform alpha 1 [Homo
sapiens]
Length = 306
Score = 638 bits (1646), Expect = 0.0
Identities = 306/306 (100%), Positives = 306/306 (100%)
Query: 1 MPEAGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFN 60
MPEAGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFN
Sbjct: 1 MPEAGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFN 60
Query: 61 SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 120
SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD
Sbjct: 61 SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 120
Query: 121 SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 180
SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP
Sbjct: 121 SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 180
Query: 181 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 240
PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS
Sbjct: 181 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 240
Query: 241 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 300
TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR
Sbjct: 241 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 300
Query: 301 KPGNLV 306
KPGNLV
Sbjct: 301 KPGNLV 306
>gi|41281957 hypothetical protein LOC753 isoform alpha 2 [Homo
sapiens]
Length = 288
Score = 589 bits (1518), Expect = e-168
Identities = 288/306 (94%), Positives = 288/306 (94%), Gaps = 18/306 (5%)
Query: 1 MPEAGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFN 60
MPEAGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFN
Sbjct: 1 MPEAGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFN 60
Query: 61 SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 120
SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ
Sbjct: 61 SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ-------- 112
Query: 121 SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 180
IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP
Sbjct: 113 ----------IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 162
Query: 181 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 240
PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS
Sbjct: 163 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 222
Query: 241 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 300
TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR
Sbjct: 223 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 282
Query: 301 KPGNLV 306
KPGNLV
Sbjct: 283 KPGNLV 288
>gi|4757884 hypothetical protein LOC753 isoform beta 1 [Homo
sapiens]
Length = 248
Score = 506 bits (1302), Expect = e-143
Identities = 245/246 (99%), Positives = 246/246 (100%)
Query: 61 SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 120
+ELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD
Sbjct: 3 AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 62
Query: 121 SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 180
SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP
Sbjct: 63 SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 122
Query: 181 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 240
PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS
Sbjct: 123 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 182
Query: 241 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 300
TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR
Sbjct: 183 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 242
Query: 301 KPGNLV 306
KPGNLV
Sbjct: 243 KPGNLV 248
>gi|51093708 hypothetical protein LOC753 isoform gamma 1 [Homo
sapiens]
Length = 269
Score = 506 bits (1302), Expect = e-143
Identities = 245/246 (99%), Positives = 246/246 (100%)
Query: 61 SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 120
+ELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD
Sbjct: 24 AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 83
Query: 121 SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 180
SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP
Sbjct: 84 SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 143
Query: 181 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 240
PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS
Sbjct: 144 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 203
Query: 241 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 300
TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR
Sbjct: 204 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 263
Query: 301 KPGNLV 306
KPGNLV
Sbjct: 264 KPGNLV 269
>gi|41281948 hypothetical protein LOC753 isoform beta 2 [Homo
sapiens]
Length = 230
Score = 456 bits (1174), Expect = e-129
Identities = 227/246 (92%), Positives = 228/246 (92%), Gaps = 18/246 (7%)
Query: 61 SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 120
+ELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ
Sbjct: 3 AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ-------- 54
Query: 121 SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 180
IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP
Sbjct: 55 ----------IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 104
Query: 181 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 240
PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS
Sbjct: 105 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 164
Query: 241 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 300
TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR
Sbjct: 165 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 224
Query: 301 KPGNLV 306
KPGNLV
Sbjct: 225 KPGNLV 230
>gi|51093710 hypothetical protein LOC753 isoform gamma 2 [Homo
sapiens]
Length = 251
Score = 456 bits (1174), Expect = e-129
Identities = 227/246 (92%), Positives = 228/246 (92%), Gaps = 18/246 (7%)
Query: 61 SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 120
+ELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ
Sbjct: 24 AELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQ-------- 75
Query: 121 SAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 180
IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP
Sbjct: 76 ----------IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEP 125
Query: 181 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 240
PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS
Sbjct: 126 PPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISAS 185
Query: 241 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 300
TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR
Sbjct: 186 TCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDR 245
Query: 301 KPGNLV 306
KPGNLV
Sbjct: 246 KPGNLV 251
>gi|40317616 transmembrane prostate androgen-induced protein isoform
b [Homo sapiens]
Length = 252
Score = 326 bits (835), Expect = 2e-89
Identities = 168/250 (67%), Positives = 190/250 (76%), Gaps = 7/250 (2%)
Query: 61 SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 120
+ELEF QIIIIVVV+ VMVVVI CLL+HYK+S RSFI+R +Q RRRED L EGCLWPS+
Sbjct: 2 AELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSE 61
Query: 121 SAAPRLGASE--IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE 178
S G E + PR DR P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGE
Sbjct: 62 STVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGE 121
Query: 179 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS 238
EPPPYQGPCTLQLRDPEQQ+ELNRESVRAPPNRTIFDSDL+D A GGPCPPSSNSGIS
Sbjct: 122 EPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGIS 180
Query: 239 ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVP 294
A+ S GRMEGPPPTYSEV+GH+PG+SF H Q S + G+RL ES +
Sbjct: 181 ATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIW 240
Query: 295 IKGKDRKPGN 304
K KD++ G+
Sbjct: 241 SKEKDKQKGH 250
>gi|21361841 transmembrane prostate androgen-induced protein isoform
a [Homo sapiens]
Length = 287
Score = 326 bits (835), Expect = 2e-89
Identities = 168/250 (67%), Positives = 190/250 (76%), Gaps = 7/250 (2%)
Query: 61 SELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSD 120
+ELEF QIIIIVVV+ VMVVVI CLL+HYK+S RSFI+R +Q RRRED L EGCLWPS+
Sbjct: 37 TELEFVQIIIIVVVMMVMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSE 96
Query: 121 SAAPRLGASE--IMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGE 178
S G E + PR DR P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGE
Sbjct: 97 STVSGNGIPEPQVYAPPRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGE 156
Query: 179 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGIS 238
EPPPYQGPCTLQLRDPEQQ+ELNRESVRAPPNRTIFDSDL+D A GGPCPPSSNSGIS
Sbjct: 157 EPPPYQGPCTLQLRDPEQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGIS 215
Query: 239 ASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVP 294
A+ S GRMEGPPPTYSEV+GH+PG+SF H Q S + G+RL ES +
Sbjct: 216 ATCYGSGGRMEGPPPTYSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIW 275
Query: 295 IKGKDRKPGN 304
K KD++ G+
Sbjct: 276 SKEKDKQKGH 285
>gi|40317620 transmembrane prostate androgen-induced protein isoform
c [Homo sapiens]
Length = 237
Score = 305 bits (781), Expect = 3e-83
Identities = 156/234 (66%), Positives = 176/234 (75%), Gaps = 7/234 (2%)
Query: 77 VMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSDSAAPRLGASE--IMHA 134
VMVVVI CLL+HYK+S RSFI+R +Q RRRED L EGCLWPS+S G E +
Sbjct: 3 VMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSESTVSGNGIPEPQVYAP 62
Query: 135 PRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP 194
PR DR P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP
Sbjct: 63 PRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP 122
Query: 195 EQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPT 254
EQQ+ELNRESVRAPPNRTIFDSDL+D A GGPCPPSSNSGISA+ S GRMEGPPPT
Sbjct: 123 EQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGISATCYGSGGRMEGPPPT 181
Query: 255 YSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVPIKGKDRKPGN 304
YSEV+GH+PG+SF H Q S + G+RL ES + K KD++ G+
Sbjct: 182 YSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIWSKEKDKQKGH 235
>gi|40317618 transmembrane prostate androgen-induced protein isoform
c [Homo sapiens]
Length = 237
Score = 305 bits (781), Expect = 3e-83
Identities = 156/234 (66%), Positives = 176/234 (75%), Gaps = 7/234 (2%)
Query: 77 VMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSDSAAPRLGASE--IMHA 134
VMVVVI CLL+HYK+S RSFI+R +Q RRRED L EGCLWPS+S G E +
Sbjct: 3 VMVVVITCLLSHYKLSARSFISRHSQGRRREDALSSEGCLWPSESTVSGNGIPEPQVYAP 62
Query: 135 PRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP 194
PR DR P F QR+RF RFQPTYPY+QHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP
Sbjct: 63 PRPTDRLAVPPFAQRERFHRFQPTYPYLQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDP 122
Query: 195 EQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPT 254
EQQ+ELNRESVRAPPNRTIFDSDL+D A GGPCPPSSNSGISA+ S GRMEGPPPT
Sbjct: 123 EQQLELNRESVRAPPNRTIFDSDLMDSARL-GGPCPPSSNSGISATCYGSGGRMEGPPPT 181
Query: 255 YSEVMGHHPGASFLHHQRS---NAHRGSRLQFQQ-NNAESTIVPIKGKDRKPGN 304
YSEV+GH+PG+SF H Q S + G+RL ES + K KD++ G+
Sbjct: 182 YSEVIGHYPGSSFQHQQSSGPPSLLEGTRLHHTHIAPLESAAIWSKEKDKQKGH 235
>gi|208973262 low density lipoprotein-related protein 12 isoform b
precursor [Homo sapiens]
Length = 840
Score = 49.3 bits (116), Expect = 4e-06
Identities = 60/254 (23%), Positives = 103/254 (40%), Gaps = 39/254 (15%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFNSELEFAQIIIIVVVVT 76
F C + +C++ S VC+ Q+DCGD SDEENC P I + + A +I ++
Sbjct: 437 FHCKNNRCVF-ESWVCDSQDDCGDGSDEENC--------PVIVPTRVITAAVIGSLICGL 487
Query: 77 VMVVVIVCLLNHYKV---STRSF---INRPNQSRRREDGLPQEGCL-----------WPS 119
++V+ + C Y + RSF ++R R + P G L +P
Sbjct: 488 LLVIALGCTCKLYSLRMFERRSFETQLSRVEAELLRREAPPSYGQLIAQGLIPPVEDFPV 547
Query: 120 DSAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSR-FQPTYPYVQHEIDLPPTISLSDGE 178
S + A RS+ FT+ R S + + + + + +DG+
Sbjct: 548 CSPNQASVLENLRLAVRSQLGFTSVRLPMAGRSSNIWNRIFNFARSRHSGSLALVSADGD 607
Query: 179 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGG-------PCPP 231
E P Q R+PE+ +R + T +++ D+A SGG PP
Sbjct: 608 EVVPSQSTS----REPERN-HTHRSLFSVESDDTDTENERRDMAGASGGVAAPLPQKVPP 662
Query: 232 SSNSGISASTCSSN 245
++ + C+S+
Sbjct: 663 TTAVEATVGACASS 676
Score = 37.4 bits (85), Expect = 0.017
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIF 59
+F C +GKC+ + CN ++CGD+SDEE C P F
Sbjct: 151 QFRCGNGKCIP-EAWKCNNMDECGDSSDEEICAKEANPPTAAAF 193
Score = 32.7 bits (73), Expect = 0.41
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+F C+ Y S CN QN C + SDE+NC
Sbjct: 398 EFPCSRNGVCYPRSDRCNYQNHCPNGSDEKNC 429
>gi|7305525 low density lipoprotein-related protein 12 isoform a
precursor [Homo sapiens]
Length = 859
Score = 49.3 bits (116), Expect = 4e-06
Identities = 60/254 (23%), Positives = 103/254 (40%), Gaps = 39/254 (15%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFNSELEFAQIIIIVVVVT 76
F C + +C++ S VC+ Q+DCGD SDEENC P I + + A +I ++
Sbjct: 456 FHCKNNRCVF-ESWVCDSQDDCGDGSDEENC--------PVIVPTRVITAAVIGSLICGL 506
Query: 77 VMVVVIVCLLNHYKV---STRSF---INRPNQSRRREDGLPQEGCL-----------WPS 119
++V+ + C Y + RSF ++R R + P G L +P
Sbjct: 507 LLVIALGCTCKLYSLRMFERRSFETQLSRVEAELLRREAPPSYGQLIAQGLIPPVEDFPV 566
Query: 120 DSAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSR-FQPTYPYVQHEIDLPPTISLSDGE 178
S + A RS+ FT+ R S + + + + + +DG+
Sbjct: 567 CSPNQASVLENLRLAVRSQLGFTSVRLPMAGRSSNIWNRIFNFARSRHSGSLALVSADGD 626
Query: 179 EPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGG-------PCPP 231
E P Q R+PE+ +R + T +++ D+A SGG PP
Sbjct: 627 EVVPSQSTS----REPERN-HTHRSLFSVESDDTDTENERRDMAGASGGVAAPLPQKVPP 681
Query: 232 SSNSGISASTCSSN 245
++ + C+S+
Sbjct: 682 TTAVEATVGACASS 695
Score = 37.4 bits (85), Expect = 0.017
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIF 59
+F C +GKC+ + CN ++CGD+SDEE C P F
Sbjct: 170 QFRCGNGKCIP-EAWKCNNMDECGDSSDEEICAKEANPPTAAAF 212
Score = 32.7 bits (73), Expect = 0.41
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+F C+ Y S CN QN C + SDE+NC
Sbjct: 417 EFPCSRNGVCYPRSDRCNYQNHCPNGSDEKNC 448
>gi|189242612 complement component 6 precursor [Homo sapiens]
Length = 934
Score = 45.8 bits (107), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
KF C SG+C+ L CN +NDCGDNSDE +C
Sbjct: 143 KFRCDSGRCI-ARKLECNGENDCGDNSDERDC 173
>gi|169636415 complement component 6 precursor [Homo sapiens]
Length = 934
Score = 45.8 bits (107), Expect = 5e-05
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
KF C SG+C+ L CN +NDCGDNSDE +C
Sbjct: 143 KFRCDSGRCI-ARKLECNGENDCGDNSDERDC 173
>gi|126012573 low density lipoprotein-related protein 2 [Homo sapiens]
Length = 4655
Score = 45.1 bits (105), Expect = 8e-05
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 13 TECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHP 54
TE +F C + +C+ +C+ NDCGDNSDE +C + T HP
Sbjct: 3760 TESEFRCVNQQCIP-SRWICDHYNDCGDNSDERDCEMRTCHP 3800
Score = 42.0 bits (97), Expect = 7e-04
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+FTC SG+C+Y + VC+ ++DC DN DE+ C
Sbjct: 226 QFTCPSGRCIYQ-NWVCDGEDDCKDNGDEDGC 256
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHP--PPGIFNSE 62
+FTC +G+C+ + VC++ NDCGD SDE L T P PP F +
Sbjct: 3036 QFTCQNGRCISK-TFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFKCD 3083
Score = 40.4 bits (93), Expect = 0.002
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENCL 48
FTC +G+C+ S C+ NDCGD SDE CL
Sbjct: 2746 FTCANGRCVQY-SYRCDYYNDCGDGSDEAGCL 2776
Score = 40.4 bits (93), Expect = 0.002
Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
F C + C+ L C+ QNDCGDNSDEENC
Sbjct: 3725 FRCKNHHCIPL-RWQCDGQNDCGDNSDEENC 3754
Score = 40.0 bits (92), Expect = 0.003
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 14 ECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFN 60
+ ++TC + +C+ + VC+ NDCGD SDE+NC TE P FN
Sbjct: 1111 DTQYTCDNHQCISK-NWVCDTDNDCGDGSDEKNC-NSTETCQPSQFN 1155
Score = 38.9 bits (89), Expect = 0.006
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPP 55
+F C +G+C+ + L CN +DC DNSDE+ C + H P
Sbjct: 3079 EFKCDNGRCIEMMKL-CNHLDDCLDNSDEKGCGINECHDP 3117
Score = 38.1 bits (87), Expect = 0.010
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
F C +G C++ L C++ NDCGD SDE++C
Sbjct: 1276 FHCDNGNCIHRAWL-CDRDNDCGDMSDEKDC 1305
Score = 37.4 bits (85), Expect = 0.017
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 13 TECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVT 51
+E +FTC G C+ C++ NDCGD SDE CL T
Sbjct: 2994 SENEFTCGYGLCIPK-IFRCDRHNDCGDYSDERGCLYQT 3031
Score = 36.6 bits (83), Expect = 0.029
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 10 NAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
N + FTC G+C+ C+++NDC D SDE NC
Sbjct: 1065 NTCSSSAFTCGHGECIP-AHWRCDKRNDCVDGSDEHNC 1101
Score = 35.8 bits (81), Expect = 0.049
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSD--EENCLLVTEHP 54
+F C + +C+Y VCN +DCGD +D EE+C T P
Sbjct: 3888 RFRCDNNRCIYSHE-VCNGVDDCGDGTDETEEHCRKPTPKP 3927
Score = 35.4 bits (80), Expect = 0.064
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 3 EAGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLL 49
E +T +F C + +C+ L S VC+ DC D SDE C+L
Sbjct: 1140 EKNCNSTETCQPSQFNCPNHRCIDL-SFVCDGDKDCVDGSDEVGCVL 1185
Score = 35.4 bits (80), Expect = 0.064
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEEN--CLLVTEHP 54
FTC++G+C+ C+ NDCGD SDE C L T P
Sbjct: 2705 FTCSNGRCIS-EEWKCDNDNDCGDGSDEMESVCALHTCSP 2743
Score = 35.0 bits (79), Expect = 0.083
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
Query: 12 FTECKFTC-TSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHP 54
FTE F+C T+ +C+ + VCN +DC DNSDE+ C T HP
Sbjct: 3681 FTE--FSCKTNYRCIPKWA-VCNGVDDCRDNSDEQGCEERTCHP 3721
Score = 34.7 bits (78), Expect = 0.11
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+F+C +G+C+ + VC+ NDC D SDE C
Sbjct: 187 EFSCGNGECIPR-AYVCDHDNDCQDGSDEHAC 217
Score = 34.7 bits (78), Expect = 0.11
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 14/53 (26%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDE--------ENC-----LLVTEHPP 55
+F C G+C+ +C+ NDCGD SDE +NC L V + PP
Sbjct: 2910 EFKCDGGRCIP-SEWICDGDNDCGDMSDEDKRHQCQNQNCSDSEFLCVNDRPP 2961
Score = 33.5 bits (75), Expect = 0.24
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEH 53
+ TC +G C Y S C+ + DC D+SDE NC + H
Sbjct: 149 QLTCDNGAC-YNTSQKCDWKVDCRDSSDEINCTEICLH 185
Score = 33.5 bits (75), Expect = 0.24
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDE--ENCL 48
+F C +G+C+ + C+ NDCGD+SDE E C+
Sbjct: 3639 QFRCANGRCIPQ-AWKCDVDNDCGDHSDEPIEECM 3672
Score = 33.5 bits (75), Expect = 0.24
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
F CTSG C++ L C+ DC D SDE +C
Sbjct: 3803 FQCTSGHCVH-SELKCDGSADCLDASDEADC 3832
Score = 33.5 bits (75), Expect = 0.24
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 13 TECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
TE ++ C +G C+ + VC+ +DCGD SDE C
Sbjct: 3929 TEYEYKCGNGHCIPHDN-VCDDADDCGDWSDELGC 3962
Score = 33.1 bits (74), Expect = 0.32
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 13 TECKFTCTSG-KCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFNSE 62
T +F C SG KC+ + + C+ DC DNSDE C PPG+ +S+
Sbjct: 1188 TASQFKCASGDKCIGVTNR-CDGVFDCSDNSDEAGC----PTRPPGMCHSD 1233
Score = 31.6 bits (70), Expect = 0.92
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
F C +G+C+ +C+ +DC DNSDE+ C
Sbjct: 1031 FPCKNGRCVP-NYYLCDGVDDCHDNSDEQLC 1060
Score = 31.2 bits (69), Expect = 1.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 9 TNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDE 44
T+ + +F C SG+C+ C+Q+ DC D SDE
Sbjct: 2861 THTCSSSEFQCASGRCIPQ-HWYCDQETDCFDASDE 2895
Score = 31.2 bits (69), Expect = 1.2
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEH 53
+F C+ G C +L CN +C D SDE+ L H
Sbjct: 3557 QFQCSDGNCTSPQTL-CNAHQNCPDGSDEDRLLCENHH 3593
Score = 30.8 bits (68), Expect = 1.6
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVT 51
F C SG C+ C+ DC D++DE C +VT
Sbjct: 33 FRCGSGHCIP-ADWRCDGTKDCSDDADEIGCAVVT 66
Score = 29.6 bits (65), Expect = 3.5
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+ TC++G+C+ C+ DC D +DE +C
Sbjct: 112 QITCSNGQCIP-SEYRCDHVRDCPDGADENDC 142
Score = 29.6 bits (65), Expect = 3.5
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIF 59
++ C + +C+ S C+ NDC DNSDE++ + PG F
Sbjct: 3598 EWQCANKRCIP-ESWQCDTFNDCEDNSDEDSSHCASRTCRPGQF 3640
Score = 29.3 bits (64), Expect = 4.6
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 17 FTCTS-GKCLYLGSLVCNQQNDCGDNSDE 44
F C S G+C+ S VC+Q DC D SDE
Sbjct: 72 FKCQSEGQCIP-NSWVCDQDQDCDDGSDE 99
Score = 28.9 bits (63), Expect = 6.0
Identities = 10/14 (71%), Positives = 12/14 (85%)
Query: 31 VCNQQNDCGDNSDE 44
+C+ NDCGDNSDE
Sbjct: 2841 LCDGDNDCGDNSDE 2854
>gi|28557796 low density lipoprotein receptor class A domain
containing 3 [Homo sapiens]
Length = 345
Score = 44.3 bits (103), Expect = 1e-04
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIF----NSELEFAQIIII 71
++ C +G C+ S +C+ QN+C DNSDEE+C E +F N + + I
Sbjct: 117 RYHCKNGLCIDK-SFICDGQNNCQDNSDEESCESSQEPGSGQVFVTSENQLVYYPSITYA 175
Query: 72 VV---VVTVMVVVIVCLLNHYKVSTRSFINRP 100
++ V+ V+VV ++ L+ H++ + + P
Sbjct: 176 IIGSSVIFVLVVALLALVLHHQRKRNNLMTLP 207
Score = 37.0 bits (84), Expect = 0.022
Identities = 16/31 (51%), Positives = 17/31 (54%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
F C SG +G CN DC D SDEENC
Sbjct: 76 FPCASGIHCIIGRFRCNGFEDCPDGSDEENC 106
Score = 32.3 bits (72), Expect = 0.54
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 6/43 (13%)
Query: 10 NAFT-ECK----FTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
N FT EC F C++G+C+ G+ C+ DC D SDE+ C
Sbjct: 23 NNFTNECNIPGNFMCSNGRCIP-GAWQCDGLPDCFDKSDEKEC 64
>gi|126012562 low density lipoprotein-related protein 1 [Homo sapiens]
Length = 4544
Score = 43.5 bits (101), Expect = 2e-04
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 2 PEAGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
P Q +F C+SG+C+ +L+CN Q+DCGD+SDE C
Sbjct: 2895 PHCTSQEHKCNASSQFLCSSGRCV-AEALLCNGQDDCGDSSDERGC 2939
Score = 42.4 bits (98), Expect = 5e-04
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 12 FTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
F +FTC +G+C+ + + C+ NDCGDNSDE C
Sbjct: 977 FPLTQFTCNNGRCINI-NWRCDNDNDCGDNSDEAGC 1011
Score = 40.0 bits (92), Expect = 0.003
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 3 EAGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDE--ENCLLVTEHPPPGIFN 60
EAG +++ + +F C SG+C+ C+ NDCGD SDE NC PP G
Sbjct: 1008 EAG--CSHSCSSTQFKCNSGRCIP-EHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHT 1064
Query: 61 SELE 64
E +
Sbjct: 1065 DEFQ 1068
Score = 40.0 bits (92), Expect = 0.003
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Query: 13 TECK----FTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
T CK F C + +CL SL CN +DCGD SDEE+C
Sbjct: 3739 THCKDKKEFLCRNQRCLS-SSLRCNMFDDCGDGSDEEDC 3776
Score = 39.7 bits (91), Expect = 0.003
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+F C + +C+ G C+ NDCGDNSDEE+C
Sbjct: 3540 QFRCKNNRCVP-GRWQCDYDNDCGDNSDEESC 3570
Score = 39.3 bits (90), Expect = 0.004
Identities = 18/40 (45%), Positives = 21/40 (52%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPP 55
KF C + VC+ NDC DNSDEENC + PP
Sbjct: 1109 KFGCKDSARCISKAWVCDGDNDCEDNSDEENCESLACRPP 1148
Score = 37.7 bits (86), Expect = 0.013
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 13 TECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+E +F+C +G+C+ G C+ +DC D SDE++C
Sbjct: 3576 SESEFSCANGRCI-AGRWKCDGDHDCADGSDEKDC 3609
Score = 37.0 bits (84), Expect = 0.022
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+F C++G C + +C+ NDC DNSDE NC
Sbjct: 3378 QFQCSTGICTN-PAFICDGDNDCQDNSDEANC 3408
Score = 35.8 bits (81), Expect = 0.049
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEE-NCLLVTEHP 54
+F+C SG+C+ + S C+ +DCGD SDE +C T P
Sbjct: 940 QFSCASGRCIPI-SWTCDLDDDCGDRSDESASCAYPTCFP 978
Score = 34.7 bits (78), Expect = 0.11
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHP 54
+F CT+ G CN Q++CGD DE +C VT P
Sbjct: 3417 QFKCTNTNRCIPGIFRCNGQDNCGDGEDERDCPEVTCAP 3455
Score = 34.3 bits (77), Expect = 0.14
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDE 44
+F C +G+CL C+ +NDC D SDE
Sbjct: 2862 EFRCANGRCLSSRQWECDGENDCHDQSDE 2890
Score = 33.9 bits (76), Expect = 0.19
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Query: 15 CKFT---CTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
CK T C++G+C+ L CN +DCGD SDE C
Sbjct: 2566 CKKTFRQCSNGRCVS-NMLWCNGADDCGDGSDEIPC 2600
Score = 33.9 bits (76), Expect = 0.19
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 19 CTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
C Y S VC+ NDCGD SDE +C
Sbjct: 2660 CERTSLCYAPSWVCDGANDCGDYSDERDC 2688
Score = 33.5 bits (75), Expect = 0.24
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFN 60
+F C + +C+ +C+ NDCG++ DE N PP F+
Sbjct: 899 RFKCENNRCIP-NRWLCDGDNDCGNSEDESNATCSARTCPPNQFS 942
Score = 32.7 bits (73), Expect = 0.41
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+F C G C+ S CNQ DC D SDE NC
Sbjct: 2609 EFRCRDGTCIGNSSR-CNQFVDCEDASDEMNC 2639
Score = 32.3 bits (72), Expect = 0.54
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
F C SG+C+ + S C++++DC DE +C
Sbjct: 2701 FACPSGRCIPM-SWTCDKEDDCEHGEDETHC 2730
Score = 32.3 bits (72), Expect = 0.54
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 17 FTCTSGK-CLYLGSLVCNQQNDCGDNSDEENCLLVTEH 53
F C + + CL++G C+ ++CGD +DEE+C T H
Sbjct: 3701 FRCKNDRVCLWIGRQ-CDGTDNCGDGTDEEDCEPPTAH 3737
Score = 31.2 bits (69), Expect = 1.2
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+F C SG C+ L C+ DC D SDEE C
Sbjct: 3617 QFQCKSGHCIPL-RWRCDADADCMDGSDEEAC 3647
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 13 TECKFTCTSGKCLYLGSLVCNQQNDCGDNSDE 44
T +F C + KC+ C+ ++DCGD+SDE
Sbjct: 3335 TASQFVCKNDKCIPFW-WKCDTEDDCGDHSDE 3365
Score = 30.0 bits (66), Expect = 2.7
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 13 TECKFTCTSGKCLYLGSLVCNQQNDCGDNSDE 44
+E +F C + +C+ L C+ +DCGD SDE
Sbjct: 2735 SEAQFECQNHRCISKQWL-CDGSDDCGDGSDE 2765
Score = 29.6 bits (65), Expect = 3.5
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFNSE 62
+F C + +C+ C+ NDC DNSDE L P F E
Sbjct: 858 EFACANSRCIQ-ERWKCDGDNDCLDNSDEAPALCHQHTCPSDRFKCE 903
Score = 29.6 bits (65), Expect = 3.5
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDE--ENC 47
+F C + C L + C+ ++DCGDNSDE E C
Sbjct: 3658 EFQCNNTLCKPL-AWKCDGEDDCGDNSDENPEEC 3690
Score = 28.5 bits (62), Expect = 7.8
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDE-ENCLLVT 51
+F C+ K VC++ NDC D SDE NC +T
Sbjct: 3457 QFQCSITKRCIPRVWVCDRDNDCVDGSDEPANCTQMT 3493
>gi|157384998 low density lipoprotein receptor-related protein 4
[Homo sapiens]
Length = 1905
Score = 43.1 bits (100), Expect = 3e-04
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 9 TNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
T+ T +F C SG+C+ L S C+ ++DC DNSDEENC
Sbjct: 267 TSMCTAEQFRCHSGRCVRL-SWRCDGEDDCADNSDEENC 304
Score = 37.7 bits (86), Expect = 0.013
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
F C +GKC+ S VC+ NDC D+SDE++C
Sbjct: 76 FHCDNGKCIRR-SWVCDGDNDCEDDSDEQDC 105
Score = 37.7 bits (86), Expect = 0.013
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 4/35 (11%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDE---ENC 47
+F C +G+C+ L CN NDCGDNSDE +NC
Sbjct: 316 QFLCWNGRCIGQRKL-CNGVNDCGDNSDESPQQNC 349
Score = 37.4 bits (85), Expect = 0.017
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFNSELEFAQIII 70
+F C+ G C+ C+ DC D SDEENC PP + + + + I+
Sbjct: 152 EFRCSDGSCI-AEHWYCDGDTDCKDGSDEENCPSAVPAPPCNLEEFQCAYGRCIL 205
Score = 36.2 bits (82), Expect = 0.037
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 17 FTCTS---GKCLYL-GSLVCNQQNDCGDNSDEENCLLVTEHP 54
FTC G+C + C+ NDCGD+SDE+ C+L T P
Sbjct: 32 FTCAVSALGECTCIPAQWQCDGDNDCGDHSDEDGCILPTCSP 73
Score = 33.5 bits (75), Expect = 0.24
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 14 ECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEE 45
E +F C +G C+ C+ NDCGDNSDE+
Sbjct: 112 EDEFPCQNGYCIR-SLWHCDGDNDCGDNSDEQ 142
Score = 33.5 bits (75), Expect = 0.24
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPP 55
+F C G+C+ L C+ +DCGD SDE +C + H P
Sbjct: 195 EFQCAYGRCI-LDIYHCDGDDDCGDWSDESDC---SSHQP 230
Score = 33.5 bits (75), Expect = 0.24
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+F C SG C+ G C+ DC D SDE NC
Sbjct: 235 EFMCDSGLCINAGWR-CDGDADCDDQSDERNC 265
>gi|167555125 low density lipoprotein receptor-related protein 3
[Homo sapiens]
Length = 770
Score = 42.4 bits (98), Expect = 5e-04
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPP 55
+F C +GKCL G CN ++CGD SDE NC PP
Sbjct: 170 EFRCDNGKCLP-GPWQCNTVDECGDGSDEGNCSAPASEPP 208
Score = 34.3 bits (77), Expect = 0.14
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFNSELEFAQIIIIVVVVT 76
F C + C++ + C+ Q DC D SDE CL ++ A +I +V
Sbjct: 460 FHCGTNLCIF-ETWRCDGQEDCQDGSDEHGCLAAVPR--------KVITAALIGSLVCGL 510
Query: 77 VMVVVIVCLLNHYKVSTRSFINRPNQSRRRE 107
++V+ + C Y + T+ + Q R E
Sbjct: 511 LLVIALGCAFKLYSLRTQEYRAFETQMTRLE 541
Score = 29.6 bits (65), Expect = 3.5
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 16 KFTCTSGKCL-YLGSLVCNQQNDCGDNSDEENC 47
++ C G L Y + CN Q C D +DE+NC
Sbjct: 420 QYPCEGGSGLCYTPADRCNNQKSCPDGADEKNC 452
>gi|29244926 corin [Homo sapiens]
Length = 1042
Score = 42.4 bits (98), Expect = 5e-04
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 13 TECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+E F C +GKCL SLVC+ +DCGD SDE+NC
Sbjct: 307 SENLFHCHTGKCLNY-SLVCDGYDDCGDLSDEQNC 340
Score = 40.0 bits (92), Expect = 0.003
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
F C SG+C+ L S C+ Q DC D+SDEENC
Sbjct: 585 FKCRSGQCV-LASRRCDGQADCDDDSDEENC 614
Score = 36.6 bits (83), Expect = 0.029
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
F C SG C+ G L CN NDC D SDE +C
Sbjct: 275 FLCASGICIP-GKLQCNGYNDCDDWSDEAHC 304
Score = 33.5 bits (75), Expect = 0.24
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 19 CTSGKCLYLGSLVCNQQNDCGDNSDEENCLLV 50
C +G+C+ + C+ DC D SDEENC ++
Sbjct: 387 CRNGQCIP-STFQCDGDEDCKDGSDEENCSVI 417
Score = 32.0 bits (71), Expect = 0.70
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 19 CTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
C G+C+ + VC+ +DC D SDE NC
Sbjct: 350 CGDGRCIAM-EWVCDGDHDCVDKSDEVNC 377
>gi|93102379 low density lipoprotein-related protein 1B precursor
[Homo sapiens]
Length = 4599
Score = 42.0 bits (97), Expect = 7e-04
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+F C +G C L + +C+ +NDCGDNSDE NC
Sbjct: 3361 RFQCGTGLCA-LPAFICDGENDCGDNSDELNC 3391
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEE--NCLLVTEHPPPGIFNSELE 64
+F C+SG+C+ G C+ NDCGD SDE NC H P G +E +
Sbjct: 1010 QFRCSSGRCIP-GHWACDGDNDCGDFSDEAQINCTKEEIHSPAGCNGNEFQ 1059
Score = 41.2 bits (95), Expect = 0.001
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
F C +G+C+ G L C+ ++DCGD SDE NC
Sbjct: 2896 FMCKNGRCIPSGGL-CDNKDDCGDGSDERNC 2925
Score = 38.1 bits (87), Expect = 0.010
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+F C + C+ C+ QNDC DNSDEENC
Sbjct: 3480 EFQCKNNNCIP-DHWRCDSQNDCSDNSDEENC 3510
Score = 37.0 bits (84), Expect = 0.022
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 19 CTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVT 51
C + +C+ G L C+ +NDCGDNSDE +C + T
Sbjct: 2559 CYNRRCIPHGKL-CDGENDCGDNSDELDCKVST 2590
Score = 37.0 bits (84), Expect = 0.022
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+F C++ KC+ + L C++ +DCGD SDE+ C
Sbjct: 3766 EFACSNKKCIPM-DLQCDRLDDCGDGSDEQGC 3796
Score = 35.8 bits (81), Expect = 0.049
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+F C G C+ S CNQ DC D SDE+NC
Sbjct: 2595 EFRCADGTCIPR-SARCNQNIDCADASDEKNC 2625
Score = 35.8 bits (81), Expect = 0.049
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
F+C SG+C+ L + +C+ Q DC D DE +C
Sbjct: 2687 FSCPSGRCI-LNTWICDGQKDCEDGRDEFHC 2716
Score = 35.4 bits (80), Expect = 0.064
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCL 48
+F C SG+C+ C+ +DCGD SDE C+
Sbjct: 972 QFVCKSGRCIS-SKWHCDSDDDCGDGSDEVGCV 1003
Score = 35.0 bits (79), Expect = 0.083
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+F CT + +L CN Q+DCGD DE +C
Sbjct: 3400 QFKCTKNQKCIPVNLRCNGQDDCGDEEDERDC 3431
Score = 34.3 bits (77), Expect = 0.14
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 19 CTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEH 53
C S L + +C+ NDCGD SDE C + +H
Sbjct: 2646 CNSTSLCVLPTWICDGSNDCGDYSDELKCPVQNKH 2680
Score = 33.1 bits (74), Expect = 0.32
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCL 48
++ C S C+ SL CN + DC D SDE +C+
Sbjct: 3598 EYICASDGCIS-ASLKCNGEYDCADGSDEMDCV 3629
Score = 32.3 bits (72), Expect = 0.54
Identities = 12/29 (41%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDE 44
+F+C +G+C+ L C++++DCGD +DE
Sbjct: 931 QFSCGNGRCIPRAWL-CDREDDCGDQTDE 958
Score = 32.3 bits (72), Expect = 0.54
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 19 CTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
C + + +CN ++CGDNSDE++C
Sbjct: 3723 CRNNRICLQSEQMCNGIDECGDNSDEDHC 3751
Score = 31.6 bits (70), Expect = 0.92
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 4 AGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDE 44
AG N E F C + C+ VC+ +DCGD SDE
Sbjct: 2797 AGCAPNNTCDENAFMCHNKVCIPK-QFVCDHDDDCGDGSDE 2836
Score = 31.6 bits (70), Expect = 0.92
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 2 PEAGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDE 44
P+ G++ TE +F+C G+CL C+ DC D+SDE
Sbjct: 2838 PQCGYRQCG--TE-EFSCADGRCLLNTQWQCDGDFDCPDHSDE 2877
Score = 31.6 bits (70), Expect = 0.92
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDE 44
+F C + C L VC+ ++DCGDNSDE
Sbjct: 3678 EFLCNNSLCK-LHFWVCDGEDDCGDNSDE 3705
Score = 31.2 bits (69), Expect = 1.2
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 5 GFQATNAFTECK---FTCTS-GKCLYLGSLVCNQQNDCGDNSDEENC 47
G + TECK F C + C+ + L C+ +DC D SDEENC
Sbjct: 3622 GSDEMDCVTECKEDQFRCKNKAHCIPIRWL-CDGIHDCVDGSDEENC 3667
Score = 30.8 bits (68), Expect = 1.6
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 16 KFTCTS-GKCLYLGSLVCNQQNDCGDNSDEENC 47
KF+C S G+C+ + VC+ DC D SDE++C
Sbjct: 1100 KFSCWSTGRCINK-AWVCDGDIDCEDQSDEDDC 1131
Score = 30.8 bits (68), Expect = 1.6
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
F C +G C+ C+ DC D SDE NC
Sbjct: 3520 FLCANGDCVS-SRFWCDGDFDCADGSDERNC 3549
Score = 30.4 bits (67), Expect = 2.0
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEEN 46
+F C + +C+ L C+ NDCG N DE N
Sbjct: 890 QFKCQNNRCIPKRWL-CDGANDCGSNEDESN 919
Score = 30.0 bits (66), Expect = 2.7
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
F C + K VC++ DC D SDE NC
Sbjct: 3441 FQCKTTKHCISKLWVCDEDPDCADASDEANC 3471
Score = 29.6 bits (65), Expect = 3.5
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCL 48
+F C++ KC+ +C+ ++DCGD DE + +
Sbjct: 2724 QFACSAQKCISK-HWICDGEDDCGDGLDESDSI 2755
Score = 28.5 bits (62), Expect = 7.8
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 13 TECKFTCTSGKCLYLGSLVCNQQNDCGDNSDE 44
T +F C + KC+ C+ +DCGD SDE
Sbjct: 3318 TASQFRCKTDKCIPFW-WKCDTVDDCGDGSDE 3348
>gi|65301164 very low density lipoprotein receptor isoform b [Homo
sapiens]
Length = 845
Score = 41.6 bits (96), Expect = 9e-04
Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+FTC+SG+C+ + VCN Q+DC D SDE +C
Sbjct: 158 EFTCSSGRCISR-NFVCNGQDDCSDGSDELDC 188
Score = 40.0 bits (92), Expect = 0.003
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIF 59
+F C G C++ GS CN DC D SDE NC V + PG F
Sbjct: 282 QFECEDGSCIH-GSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKF 324
Score = 38.9 bits (89), Expect = 0.006
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 3 EAGFQATNAFTECK---FTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVT 51
E+G T +C+ F CT+G+C+ L C+ DC D SDE+NC+ T
Sbjct: 21 ESGATGTGRKAKCEPSQFQCTNGRCITL-LWKCDGDEDCVDGSDEKNCVKKT 71
Score = 37.4 bits (85), Expect = 0.017
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDE 44
KF C SG+C+ + S VCNQ+ DC D SDE
Sbjct: 323 KFKCRSGECIDI-SKVCNQEQDCRDWSDE 350
Score = 30.0 bits (66), Expect = 2.7
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 2 PEAGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHP 54
PE T E S +C+ + S C+ +NDC DEENC +T P
Sbjct: 105 PEQCHMRTCRIHEISCGAHSTQCIPV-SWRCDGENDCDSGEDEENCGNITCSP 156
Score = 30.0 bits (66), Expect = 2.7
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDE--ENC 47
+F C++ C+ + S VC+ DC D SDE E C
Sbjct: 197 EFQCSTSSCIPI-SWVCDDDADCSDQSDESLEQC 229
Score = 30.0 bits (66), Expect = 2.7
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 13 TEC---KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
T+C + C SG+C++ C+ DC D SDE NC
Sbjct: 237 TKCPASEIQCGSGECIHK-KWRCDGDPDCKDGSDEVNC 273
>gi|65301167 very low density lipoprotein receptor isoform a [Homo
sapiens]
Length = 873
Score = 41.6 bits (96), Expect = 9e-04
Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+FTC+SG+C+ + VCN Q+DC D SDE +C
Sbjct: 158 EFTCSSGRCISR-NFVCNGQDDCSDGSDELDC 188
Score = 40.0 bits (92), Expect = 0.003
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIF 59
+F C G C++ GS CN DC D SDE NC V + PG F
Sbjct: 282 QFECEDGSCIH-GSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKF 324
Score = 38.9 bits (89), Expect = 0.006
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 3 EAGFQATNAFTECK---FTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVT 51
E+G T +C+ F CT+G+C+ L C+ DC D SDE+NC+ T
Sbjct: 21 ESGATGTGRKAKCEPSQFQCTNGRCITL-LWKCDGDEDCVDGSDEKNCVKKT 71
Score = 37.4 bits (85), Expect = 0.017
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDE 44
KF C SG+C+ + S VCNQ+ DC D SDE
Sbjct: 323 KFKCRSGECIDI-SKVCNQEQDCRDWSDE 350
Score = 30.0 bits (66), Expect = 2.7
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 2 PEAGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHP 54
PE T E S +C+ + S C+ +NDC DEENC +T P
Sbjct: 105 PEQCHMRTCRIHEISCGAHSTQCIPV-SWRCDGENDCDSGEDEENCGNITCSP 156
Score = 30.0 bits (66), Expect = 2.7
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDE--ENC 47
+F C++ C+ + S VC+ DC D SDE E C
Sbjct: 197 EFQCSTSSCIPI-SWVCDDDADCSDQSDESLEQC 229
Score = 30.0 bits (66), Expect = 2.7
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 13 TEC---KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
T+C + C SG+C++ C+ DC D SDE NC
Sbjct: 237 TKCPASEIQCGSGECIHK-KWRCDGDPDCKDGSDEVNC 273
>gi|4502511 complement component 9 precursor [Homo sapiens]
Length = 559
Score = 40.8 bits (94), Expect = 0.002
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPP 56
F C++G+C+ + L CN NDCGD SDE++C +E PP
Sbjct: 105 FQCSTGRCIKM-RLRCNGDNDCGDFSDEDDC--ESEPRPP 141
>gi|148727288 low density lipoprotein receptor-related protein 6 [Homo
sapiens]
Length = 1613
Score = 39.7 bits (91), Expect = 0.003
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 13 TECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+E +F C SG+C+ G+L CN +C D SDE+NC
Sbjct: 1289 SESQFQCASGQCID-GALRCNGDANCQDKSDEKNC 1322
Score = 35.0 bits (79), Expect = 0.083
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFNSELEFAQIIIIVVVV 75
+F C +G+C+ C+ DC D SDE +C TE P P N+ +I V+V
Sbjct: 1330 QFRCANGQCIGKHKK-CDHNVDCSDKSDELDC-YPTEEPAPQATNTVGS-----VIGVIV 1382
Query: 76 TVMV---VVIVC 84
T+ V V +C
Sbjct: 1383 TIFVSGTVYFIC 1394
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 39.7 bits (91), Expect = 0.003
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 14 ECKFTCTSGKCLYLGSLVCNQQNDCGDNSDE 44
E + TC+SG CL L +L+C++Q+DCGD +DE
Sbjct: 1418 EGQMTCSSGHCLPL-ALLCDRQDDCGDGTDE 1447
Score = 35.4 bits (80), Expect = 0.064
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 19 CTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTE 52
C SG+C+ G C+ DC D SDEE C+L+ E
Sbjct: 2241 CASGECVLRGG-PCDGVLDCEDGSDEEGCVLLPE 2273
Score = 34.7 bits (78), Expect = 0.11
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+F C SG+C G C+Q+ DC D SDE C
Sbjct: 1569 EFRCGSGECTPRGWR-CDQEEDCADGSDERGC 1599
Score = 34.3 bits (77), Expect = 0.14
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 21 SGKCLYLGSLVCNQQNDCGDNSDEENC 47
+G C+ G L C+ Q+DCGD SDEE C
Sbjct: 1386 NGHCVPHGWL-CDNQDDCGDGSDEEGC 1411
Score = 32.0 bits (71), Expect = 0.70
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 19 CTSGKCLYLGSLVCNQQNDCGDNSDEENCL 48
C G+CL +L+C+ DC D +DEE+CL
Sbjct: 1459 CADGRCLP-PALLCDGHPDCLDAADEESCL 1487
Score = 30.8 bits (68), Expect = 1.6
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 5 GFQATNAF-TECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCL 48
G A+ A + + +C SG+CL C+ + DC D SDE+ C+
Sbjct: 2456 GLPASRALCSPSQLSCGSGECLS-AERRCDLRPDCQDGSDEDGCV 2499
>gi|4504975 low density lipoprotein receptor precursor [Homo
sapiens]
Length = 860
Score = 39.3 bits (90), Expect = 0.004
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHP 54
+F C SG+C++ S C+ DC D SDEENC + T P
Sbjct: 201 EFHCLSGECIH-SSWRCDGGPDCKDKSDEENCAVATCRP 238
Score = 38.1 bits (87), Expect = 0.010
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIF 59
+F C+ G C++ GS C+++ DC D SDE C+ VT P F
Sbjct: 240 EFQCSDGNCIH-GSRQCDREYDCKDMSDEVGCVNVTLCEGPNKF 282
Score = 35.4 bits (80), Expect = 0.064
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFNSELEFAQI 68
+F C GKC+ VC+ DC D SDE +C ++T P NS Q+
Sbjct: 113 EFRCHDGKCISR-QFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQL 164
Score = 33.9 bits (76), Expect = 0.19
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDE 44
KF C SG+C+ L VCN DC D SDE
Sbjct: 281 KFKCHSGECITLDK-VCNMARDCRDWSDE 308
>gi|11415040 matriptase [Homo sapiens]
Length = 855
Score = 39.3 bits (90), Expect = 0.004
Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 17 FTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
F C++GKCL S CN ++DCGD SDE +C
Sbjct: 530 FRCSNGKCLSK-SQQCNGKDDCGDGSDEASC 559
Score = 37.7 bits (86), Expect = 0.013
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 3 EAGFQATNAFTECKFT--CTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
EA N T K T C +G CL G+ C+ + DC D SDE++C
Sbjct: 556 EASCPKVNVVTCTKHTYRCLNGLCLSKGNPECDGKEDCSDGSDEKDC 602
Score = 37.4 bits (85), Expect = 0.017
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+FTC + C L VC+ NDCGDNSDE+ C
Sbjct: 493 QFTCKNKFCKPL-FWVCDSVNDCGDNSDEQGC 523
Score = 33.9 bits (76), Expect = 0.19
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+FTC +G+C+ L C+ DC D+SDE NC
Sbjct: 456 QFTCRTGRCIRK-ELRCDGWADCTDHSDELNC 486
>gi|61744471 low density lipoprotein receptor-related protein 8
isoform 1 precursor [Homo sapiens]
Length = 963
Score = 38.5 bits (88), Expect = 0.008
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 13 TECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVT 51
T +F C SG+C++LG C+ DC D SDE +C L T
Sbjct: 261 TASQFACRSGECVHLGWR-CDGDRDCKDKSDEADCPLGT 298
Score = 35.8 bits (81), Expect = 0.049
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCL 48
+F C G C+ L CNQ+ DC D SDE CL
Sbjct: 303 EFQCGDGTCV-LAIKHCNQEQDCPDGSDEAGCL 334
Score = 34.3 bits (77), Expect = 0.14
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 3 EAGFQATNAFTEC---KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
E G T C +F C + CL VC+ +DCGD SDE C
Sbjct: 155 EGGADEAGCATLCAPHEFQCGNRSCL-AAVFVCDGDDDCGDGSDERGC 201
Score = 28.5 bits (62), Expect = 7.8
Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+F C + +C+ C++ +DC D+SDE++C
Sbjct: 51 QFQCRNERCIP-SVWRCDEDDDCLDHSDEDDC 81
>gi|65301119 low density lipoprotein receptor-related protein 8
isoform 4 precursor [Homo sapiens]
Length = 904
Score = 38.5 bits (88), Expect = 0.008
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 13 TECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVT 51
T +F C SG+C++LG C+ DC D SDE +C L T
Sbjct: 261 TASQFACRSGECVHLGWR-CDGDRDCKDKSDEADCPLGT 298
Score = 35.8 bits (81), Expect = 0.049
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCL 48
+F C G C+ L CNQ+ DC D SDE CL
Sbjct: 303 EFQCGDGTCV-LAIKHCNQEQDCPDGSDEAGCL 334
Score = 34.3 bits (77), Expect = 0.14
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 3 EAGFQATNAFTEC---KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
E G T C +F C + CL VC+ +DCGD SDE C
Sbjct: 155 EGGADEAGCATLCAPHEFQCGNRSCL-AAVFVCDGDDDCGDGSDERGC 201
Score = 28.5 bits (62), Expect = 7.8
Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 16 KFTCTSGKCLYLGSLVCNQQNDCGDNSDEENC 47
+F C + +C+ C++ +DC D+SDE++C
Sbjct: 51 QFQCRNERCIP-SVWRCDEDDDCLDHSDEDDC 81
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,945,416
Number of Sequences: 37866
Number of extensions: 763646
Number of successful extensions: 3038
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 2711
Number of HSP's gapped (non-prelim): 303
length of query: 306
length of database: 18,247,518
effective HSP length: 102
effective length of query: 204
effective length of database: 14,385,186
effective search space: 2934577944
effective search space used: 2934577944
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.