C18orf1 27706

Name: C18orf1	Sequence: fasta or formatted (306aa)		NCBI GI: 41281943
Description: hypothetical protein LOC753 isoform alpha 1		Referenced in: Prostate
Other entries for this name: alt prot [230aa] hypothetical protein LOC753 isoform beta 2 alt prot [288aa] hypothetical protein LOC753 isoform alpha 2 alt prot [248aa] hypothetical protein LOC753 isoform beta 1 alt prot [269aa] hypothetical protein LOC753 isoform gamma 1 alt prot [251aa] hypothetical protein LOC753 isoform gamma 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 15 2 C cysteine 3.6 11 1 D aspartate 4.6 14 1 E glutamate 6.2 19 2 F phenylalanine 4.2 13 1 G glycine 6.5 20 2 H histidine 2.9 9 2 I isoleucine 5.6 17 4 K lysine 2.0 6 1 L leucine 6.5 20 2 M methionine 2.3 7 1 N asparagine 5.6 17 2 P proline 9.8 30 3 Q glutamine 5.6 17 2 R arginine 6.9 21 3 S serine 9.8 30 2 T threonine 4.9 15 1 V valine 5.6 17 4 W tryptophan 0.3 1 1 Y tyrosine 2.3 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC753 isoform alpha 1 C18orf1 0.920 hypothetical protein LOC753 isoform alpha 2 C18orf1 0.785 hypothetical protein LOC753 isoform beta 1 C18orf1 0.785 hypothetical protein LOC753 isoform gamma 1 C18orf1 0.703 hypothetical protein LOC753 isoform beta 2 C18orf1 0.703 hypothetical protein LOC753 isoform gamma 2 PMEPA1 0.491 transmembrane prostate androgen-induced protein isof... PMEPA1 0.491 transmembrane prostate androgen-induced protein isof... PMEPA1 0.457 transmembrane prostate androgen-induced protein isof... PMEPA1 0.457 transmembrane prostate androgen-induced protein isof... LRP12 0.039 low density lipoprotein-related protein 12 isoform ... LRP12 0.039 low density lipoprotein-related protein 12 isoform a ... C6 0.034 complement component 6 precursor C6 0.034 complement component 6 precursor LRP2 0.033 low density lipoprotein-related protein 2 LDLRAD3 0.031 low density lipoprotein receptor class A domain cont... LRP1 0.031 low density lipoprotein-related protein 1 LRP4 0.029 low density lipoprotein receptor-related protein 4 ... LRP3 0.028 low density lipoprotein receptor-related protein 3 ... CORIN 0.028 corin LRP1B 0.028 low density lipoprotein-related protein 1B precursor... VLDLR 0.028 very low density lipoprotein receptor isoform b [Hom... VLDLR 0.028 very low density lipoprotein receptor isoform a [Hom... C9 0.026 complement component 9 precursor LRP6 0.024 low density lipoprotein receptor-related protein 6 ... SSPO 0.024 SCO-spondin LDLR 0.023 low density lipoprotein receptor precursor ST14 0.023 matriptase LRP8 0.023 low density lipoprotein receptor-related protein 8 i... LRP8 0.023 low density lipoprotein receptor-related protein 8 i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.