C18orf1 30563

Name: C18orf1	Sequence: fasta or formatted (248aa)		NCBI GI: 4757884
Description: hypothetical protein LOC753 isoform beta 1		Referenced in: Prostate
Other entries for this name: alt prot [306aa] hypothetical protein LOC753 isoform alpha 1 alt prot [230aa] hypothetical protein LOC753 isoform beta 2 alt prot [288aa] hypothetical protein LOC753 isoform alpha 2 alt prot [269aa] hypothetical protein LOC753 isoform gamma 1 alt prot [251aa] hypothetical protein LOC753 isoform gamma 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 14 2 C cysteine 2.0 5 1 D aspartate 4.4 11 1 E glutamate 5.6 14 2 F phenylalanine 3.6 9 1 G glycine 6.0 15 2 H histidine 3.2 8 2 I isoleucine 6.5 16 4 K lysine 1.6 4 1 L leucine 6.0 15 2 M methionine 2.8 7 1 N asparagine 4.4 11 2 P proline 10.5 26 3 Q glutamine 5.6 14 2 R arginine 8.5 21 3 S serine 10.5 26 2 T threonine 4.0 10 1 V valine 6.0 15 4 W tryptophan 0.4 1 1 Y tyrosine 2.4 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC753 isoform beta 1 C18orf1 0.994 hypothetical protein LOC753 isoform gamma 1 C18orf1 0.992 hypothetical protein LOC753 isoform alpha 1 C18orf1 0.899 hypothetical protein LOC753 isoform beta 2 C18orf1 0.891 hypothetical protein LOC753 isoform gamma 2 C18orf1 0.889 hypothetical protein LOC753 isoform alpha 2 PMEPA1 0.623 transmembrane prostate androgen-induced protein isof... PMEPA1 0.619 transmembrane prostate androgen-induced protein isof... PMEPA1 0.577 transmembrane prostate androgen-induced protein isof... PMEPA1 0.577 transmembrane prostate androgen-induced protein isof... ATN1 0.027 atrophin-1 ATN1 0.027 atrophin-1 SPEN 0.023 spen homolog, transcriptional regulator CACNA1B 0.021 calcium channel, voltage-dependent, N type, alpha 1B ... CTSW 0.021 cathepsin W preproprotein RHBDF1 0.016 rhomboid family 1 PDZD8 0.014 PDZ domain containing 8 TMEM131 0.012 RW1 protein ARID2 0.012 AT rich interactive domain 2 (ARID, RFX-like) GLTSCR1 0.010 glioma tumor suppressor candidate region gene 1 [Ho... CELSR2 0.010 cadherin EGF LAG seven-pass G-type receptor 2 LPIN3 0.010 lipin 3 SRCAP 0.010 Snf2-related CBP activator protein LOC389333 0.008 hypothetical protein LOC389333 SLTM 0.008 modulator of estrogen induced transcription isoform ... SLTM 0.008 modulator of estrogen induced transcription isoform ... NFAT5 0.008 nuclear factor of activated T-cells 5 isoform d [Ho... NFAT5 0.008 nuclear factor of activated T-cells 5 isoform b [Ho... SFRS16 0.008 splicing factor, arginine/serine-rich 16 LOC100289268 0.008 PREDICTED: hypothetical protein XP_002342358 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.