C18orf1 27707

Name: C18orf1	Sequence: fasta or formatted (230aa)		NCBI GI: 41281948
Description: hypothetical protein LOC753 isoform beta 2		Referenced in: Prostate
Other entries for this name: alt prot [306aa] hypothetical protein LOC753 isoform alpha 1 alt prot [288aa] hypothetical protein LOC753 isoform alpha 2 alt prot [248aa] hypothetical protein LOC753 isoform beta 1 alt prot [269aa] hypothetical protein LOC753 isoform gamma 1 alt prot [251aa] hypothetical protein LOC753 isoform gamma 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 11 2 C cysteine 1.7 4 1 D aspartate 4.3 10 1 E glutamate 5.2 12 2 F phenylalanine 3.9 9 1 G glycine 5.7 13 2 H histidine 3.5 8 2 I isoleucine 7.0 16 4 K lysine 1.7 4 1 L leucine 5.7 13 2 M methionine 3.0 7 1 N asparagine 4.8 11 2 P proline 10.4 24 3 Q glutamine 6.1 14 2 R arginine 8.7 20 3 S serine 10.0 23 2 T threonine 4.3 10 1 V valine 6.5 15 4 W tryptophan 0.0 0 0 Y tyrosine 2.6 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC753 isoform beta 2 C18orf1 0.993 hypothetical protein LOC753 isoform gamma 2 C18orf1 0.991 hypothetical protein LOC753 isoform alpha 2 C18orf1 0.975 hypothetical protein LOC753 isoform beta 1 C18orf1 0.966 hypothetical protein LOC753 isoform gamma 1 C18orf1 0.964 hypothetical protein LOC753 isoform alpha 1 PMEPA1 0.624 transmembrane prostate androgen-induced protein isof... PMEPA1 0.620 transmembrane prostate androgen-induced protein isof... PMEPA1 0.575 transmembrane prostate androgen-induced protein isof... PMEPA1 0.575 transmembrane prostate androgen-induced protein isof... ATN1 0.027 atrophin-1 ATN1 0.027 atrophin-1 CACNA1B 0.022 calcium channel, voltage-dependent, N type, alpha 1B ... CTSW 0.022 cathepsin W preproprotein RHBDF1 0.018 rhomboid family 1 PDZD8 0.016 PDZ domain containing 8 TMEM131 0.013 RW1 protein ARID2 0.013 AT rich interactive domain 2 (ARID, RFX-like) SPEN 0.011 spen homolog, transcriptional regulator GLTSCR1 0.011 glioma tumor suppressor candidate region gene 1 [Ho... CELSR2 0.011 cadherin EGF LAG seven-pass G-type receptor 2 SRCAP 0.011 Snf2-related CBP activator protein SLTM 0.009 modulator of estrogen induced transcription isoform ... SLTM 0.009 modulator of estrogen induced transcription isoform ... NFAT5 0.009 nuclear factor of activated T-cells 5 isoform d [Ho... NFAT5 0.009 nuclear factor of activated T-cells 5 isoform b [Ho... SFRS16 0.009 splicing factor, arginine/serine-rich 16 LOC100289268 0.009 PREDICTED: hypothetical protein XP_002342358 CDSN 0.009 corneodesmosin precursor SULF1 0.009 sulfatase 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.