ALS2CL 26120

Name: ALS2CL	Sequence: fasta or formatted (953aa)		NCBI GI: 33359215
Description: ALS2 C-terminal like isoform 1		Referenced in: Rab
Other entries for this name: alt prot [300aa] ALS2 C-terminal like isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 58 2 C cysteine 2.4 23 1 D aspartate 5.2 50 2 E glutamate 7.8 74 3 F phenylalanine 3.6 34 1 G glycine 8.5 81 2 H histidine 4.1 39 2 I isoleucine 1.8 17 1 K lysine 3.4 32 2 L leucine 14.4 137 4 M methionine 1.6 15 2 N asparagine 1.4 13 1 P proline 4.7 45 2 Q glutamine 6.6 63 2 R arginine 6.6 63 2 S serine 5.9 56 2 T threonine 5.0 48 2 V valine 5.9 56 2 W tryptophan 1.9 18 1 Y tyrosine 3.3 31 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ALS2 C-terminal like isoform 1 ALS2CL 0.298 ALS2 C-terminal like isoform 3 ALS2 0.249 alsin isoform 1 RSPH10B2 0.031 radial spoke head 10 homolog B2 RSPH10B 0.031 radial spoke head 10 homolog B MORN1 0.031 MORN repeat containing 1 JPH4 0.025 junctophilin 4 JPH4 0.025 junctophilin 4 RSPH1 0.024 testis-specific gene A2 JPH2 0.023 junctophilin 2 isoform 1 JPH3 0.022 junctophilin 3 JPH1 0.022 junctophilin 1 MORN3 0.022 MORN repeat containing 3 MORN4 0.019 MORN repeat containing 4 MORN4 0.019 MORN repeat containing 4 JPH2 0.019 junctophilin 2 isoform 2 ANKMY1 0.009 ankyrin repeat and MYND domain containing 1 isoform ... RIN3 0.008 Ras and Rab interactor 3 ANKMY1 0.007 ankyrin repeat and MYND domain containing 1 isoform ... RIN2 0.006 Ras and Rab interactor 2 MORN2 0.005 MORN repeat containing 2 C16orf7 0.005 chromosome 16 open reading frame 7 SMC2 0.004 structural maintenance of chromosomes 2 SMC2 0.004 structural maintenance of chromosomes 2 SMC2 0.004 structural maintenance of chromosomes 2 EEA1 0.004 early endosome antigen 1, 162kD MORN5 0.004 MORN repeat containing 5 PRPF18 0.004 PRP18 pre-mRNA processing factor 18 homolog UBR4 0.004 retinoblastoma-associated factor 600 PHF20 0.004 PHD finger protein 20 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.