ALS2CL 26121

Name: ALS2CL	Sequence: fasta or formatted (300aa)		NCBI GI: 33359217
Description: ALS2 C-terminal like isoform 3		Referenced in: Rab
Other entries for this name: alt prot [953aa] ALS2 C-terminal like isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 16 2 C cysteine 1.0 3 1 D aspartate 5.3 16 2 E glutamate 9.7 29 2 F phenylalanine 2.7 8 1 G glycine 4.7 14 2 H histidine 4.7 14 1 I isoleucine 3.0 9 1 K lysine 4.3 13 1 L leucine 19.7 59 3 M methionine 2.7 8 2 N asparagine 1.7 5 1 P proline 3.7 11 1 Q glutamine 5.3 16 1 R arginine 6.7 20 1 S serine 4.7 14 1 T threonine 5.3 16 2 V valine 4.3 13 2 W tryptophan 1.3 4 1 Y tyrosine 4.0 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ALS2 C-terminal like isoform 3 ALS2CL 1.000 ALS2 C-terminal like isoform 1 ALS2 0.282 alsin isoform 1 RIN3 0.028 Ras and Rab interactor 3 RIN2 0.021 Ras and Rab interactor 2 C16orf7 0.016 chromosome 16 open reading frame 7 ANKRD27 0.010 ankyrin repeat domain 27 (VPS9 domain) UBR1 0.010 ubiquitin protein ligase E3 component n-recognin 1 [... LOC390638 0.009 PREDICTED: similar to hCG32587 LOC390638 0.009 PREDICTED: similar to hCG32587 LOC390638 0.009 PREDICTED: similar to hCG32587 PSD2 0.007 pleckstrin and Sec7 domain containing 2 RABGEF1 0.007 RAB guanine nucleotide exchange factor (GEF) 1 IQCB1 0.007 IQ motif containing B1 isoform a IQCB1 0.007 IQ motif containing B1 isoform c UBR4 0.007 retinoblastoma-associated factor 600 CKAP4 0.005 cytoskeleton-associated protein 4 ST5 0.005 suppression of tumorigenicity 5 isoform 1 ST5 0.005 suppression of tumorigenicity 5 isoform 1 ST5 0.005 suppression of tumorigenicity 5 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.