Guide to the Human Genome
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Search of human proteins with 40068464

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
         (2191 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ...  4523   0.0  
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ...  4484   0.0  
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ...  4459   0.0  
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]   2078   0.0  
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]   1825   0.0  
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom...   116   3e-25
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]     114   8e-25
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom...   113   2e-24
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]     113   2e-24
gi|48762934 alpha 2 type I collagen [Homo sapiens]                    113   2e-24
gi|5453638 AT rich interactive domain 3B [Homo sapiens]               106   3e-22
gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ...   104   8e-22
gi|57864582 hornerin [Homo sapiens]                                   102   3e-21
gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo s...   102   5e-21
gi|109255251 loricrin [Homo sapiens]                                   99   3e-20
gi|55750053 atrophin-1 [Homo sapiens]                                  98   8e-20
gi|55750041 atrophin-1 [Homo sapiens]                                  98   8e-20
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]        97   2e-19
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]                95   7e-19
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]       95   9e-19
gi|55956910 meningioma  1 [Homo sapiens]                               93   3e-18
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa...    92   7e-18
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s...    92   7e-18
gi|163965366 nascent polypeptide-associated complex alpha subuni...    92   7e-18
gi|62122917 filaggrin family member 2 [Homo sapiens]                   91   1e-17
gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma...    91   1e-17
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    91   1e-17
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]       91   2e-17
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]         89   5e-17
gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo s...    89   5e-17

>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 [Homo
            sapiens]
          Length = 2191

 Score = 4523 bits (11731), Expect = 0.0
 Identities = 2191/2191 (100%), Positives = 2191/2191 (100%)

Query: 1    METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60
            METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ
Sbjct: 1    METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60

Query: 61   QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120
            QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL
Sbjct: 61   QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120

Query: 121  LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180
            LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA
Sbjct: 121  LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180

Query: 181  PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240
            PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY
Sbjct: 181  PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240

Query: 241  PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
            PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY
Sbjct: 241  PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300

Query: 301  GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
            GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT
Sbjct: 301  GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360

Query: 361  LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
            LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD
Sbjct: 361  LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420

Query: 421  MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
            MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ
Sbjct: 421  MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480

Query: 481  PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYG 540
            PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYG
Sbjct: 481  PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYG 540

Query: 541  QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA 600
            QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA
Sbjct: 541  QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA 600

Query: 601  PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS 660
            PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS
Sbjct: 601  PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS 660

Query: 661  PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH 720
            PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH
Sbjct: 661  PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH 720

Query: 721  PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 780
            PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG
Sbjct: 721  PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 780

Query: 781  TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 840
            TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR
Sbjct: 781  TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 840

Query: 841  MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ 900
            MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ
Sbjct: 841  MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ 900

Query: 901  SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS 960
            SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS
Sbjct: 901  SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS 960

Query: 961  PGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLT 1020
            PGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLT
Sbjct: 961  PGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLT 1020

Query: 1021 FMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAA 1080
            FMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAA
Sbjct: 1021 FMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAA 1080

Query: 1081 SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQST 1140
            SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQST
Sbjct: 1081 SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQST 1140

Query: 1141 GSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNA 1200
            GSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNA
Sbjct: 1141 GSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNA 1200

Query: 1201 PYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAM 1260
            PYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAM
Sbjct: 1201 PYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAM 1260

Query: 1261 SNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDG 1320
            SNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDG
Sbjct: 1261 SNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDG 1320

Query: 1321 MYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQI 1380
            MYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQI
Sbjct: 1321 MYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQI 1380

Query: 1381 QTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDD 1440
            QTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDD
Sbjct: 1381 QTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDD 1440

Query: 1441 MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1500
            MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS
Sbjct: 1441 MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1500

Query: 1501 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQP 1560
            FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQP
Sbjct: 1501 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQP 1560

Query: 1561 VLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSG 1620
            VLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSG
Sbjct: 1561 VLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSG 1620

Query: 1621 FLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECI 1680
            FLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECI
Sbjct: 1621 FLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECI 1680

Query: 1681 DDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLF 1740
            DDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLF
Sbjct: 1681 DDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLF 1740

Query: 1741 VVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKE 1800
            VVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKE
Sbjct: 1741 VVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKE 1800

Query: 1801 QEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKL 1860
            QEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKL
Sbjct: 1801 QEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKL 1860

Query: 1861 LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKL 1920
            LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKL
Sbjct: 1861 LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKL 1920

Query: 1921 ILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS 1980
            ILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS
Sbjct: 1921 ILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS 1980

Query: 1981 AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL 2040
            AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL
Sbjct: 1981 AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL 2040

Query: 2041 ILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGN 2100
            ILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGN
Sbjct: 2041 ILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGN 2100

Query: 2101 LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH 2160
            LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH
Sbjct: 2101 LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH 2160

Query: 2161 EGRLLDISISAVLNSLVASVICDVLFQIGQL 2191
            EGRLLDISISAVLNSLVASVICDVLFQIGQL
Sbjct: 2161 EGRLLDISISAVLNSLVASVICDVLFQIGQL 2191


>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo
            sapiens]
          Length = 2178

 Score = 4484 bits (11629), Expect = 0.0
 Identities = 2178/2191 (99%), Positives = 2178/2191 (99%), Gaps = 13/2191 (0%)

Query: 1    METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60
            METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ
Sbjct: 1    METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60

Query: 61   QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120
            QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL
Sbjct: 61   QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120

Query: 121  LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180
            LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA
Sbjct: 121  LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180

Query: 181  PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240
            PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY
Sbjct: 181  PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240

Query: 241  PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
            PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY
Sbjct: 241  PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300

Query: 301  GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
            GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT
Sbjct: 301  GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360

Query: 361  LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
            LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD
Sbjct: 361  LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420

Query: 421  MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
            MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ
Sbjct: 421  MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480

Query: 481  PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYG 540
            PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQ             MPPQYG
Sbjct: 481  PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQ-------------MPPQYG 527

Query: 541  QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA 600
            QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA
Sbjct: 528  QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA 587

Query: 601  PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS 660
            PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS
Sbjct: 588  PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS 647

Query: 661  PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH 720
            PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH
Sbjct: 648  PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH 707

Query: 721  PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 780
            PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG
Sbjct: 708  PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 767

Query: 781  TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 840
            TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR
Sbjct: 768  TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 827

Query: 841  MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ 900
            MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ
Sbjct: 828  MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ 887

Query: 901  SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS 960
            SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS
Sbjct: 888  SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS 947

Query: 961  PGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLT 1020
            PGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLT
Sbjct: 948  PGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLT 1007

Query: 1021 FMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAA 1080
            FMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAA
Sbjct: 1008 FMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAA 1067

Query: 1081 SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQST 1140
            SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQST
Sbjct: 1068 SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQST 1127

Query: 1141 GSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNA 1200
            GSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNA
Sbjct: 1128 GSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNA 1187

Query: 1201 PYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAM 1260
            PYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAM
Sbjct: 1188 PYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAM 1247

Query: 1261 SNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDG 1320
            SNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDG
Sbjct: 1248 SNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDG 1307

Query: 1321 MYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQI 1380
            MYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQI
Sbjct: 1308 MYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQI 1367

Query: 1381 QTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDD 1440
            QTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDD
Sbjct: 1368 QTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDD 1427

Query: 1441 MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1500
            MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS
Sbjct: 1428 MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1487

Query: 1501 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQP 1560
            FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQP
Sbjct: 1488 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQP 1547

Query: 1561 VLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSG 1620
            VLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSG
Sbjct: 1548 VLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSG 1607

Query: 1621 FLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECI 1680
            FLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECI
Sbjct: 1608 FLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECI 1667

Query: 1681 DDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLF 1740
            DDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLF
Sbjct: 1668 DDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLF 1727

Query: 1741 VVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKE 1800
            VVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKE
Sbjct: 1728 VVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKE 1787

Query: 1801 QEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKL 1860
            QEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKL
Sbjct: 1788 QEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKL 1847

Query: 1861 LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKL 1920
            LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKL
Sbjct: 1848 LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKL 1907

Query: 1921 ILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS 1980
            ILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS
Sbjct: 1908 ILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS 1967

Query: 1981 AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL 2040
            AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL
Sbjct: 1968 AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL 2027

Query: 2041 ILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGN 2100
            ILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGN
Sbjct: 2028 ILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGN 2087

Query: 2101 LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH 2160
            LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH
Sbjct: 2088 LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH 2147

Query: 2161 EGRLLDISISAVLNSLVASVICDVLFQIGQL 2191
            EGRLLDISISAVLNSLVASVICDVLFQIGQL
Sbjct: 2148 EGRLLDISISAVLNSLVASVICDVLFQIGQL 2178


>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo
            sapiens]
          Length = 2231

 Score = 4459 bits (11565), Expect = 0.0
 Identities = 2178/2244 (97%), Positives = 2178/2244 (97%), Gaps = 66/2244 (2%)

Query: 1    METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60
            METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ
Sbjct: 1    METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60

Query: 61   QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120
            QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL
Sbjct: 61   QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120

Query: 121  LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180
            LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA
Sbjct: 121  LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180

Query: 181  PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240
            PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY
Sbjct: 181  PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240

Query: 241  PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
            PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY
Sbjct: 241  PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300

Query: 301  GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
            GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT
Sbjct: 301  GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360

Query: 361  LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
            LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD
Sbjct: 361  LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420

Query: 421  MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
            MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ
Sbjct: 421  MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480

Query: 481  PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYG 540
            PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQ             MPPQYG
Sbjct: 481  PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQ-------------MPPQYG 527

Query: 541  QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA 600
            QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA
Sbjct: 528  QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA 587

Query: 601  PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS 660
            PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS
Sbjct: 588  PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS 647

Query: 661  PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH 720
            PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH
Sbjct: 648  PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH 707

Query: 721  PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 780
            PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG
Sbjct: 708  PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 767

Query: 781  TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 840
            TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR
Sbjct: 768  TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 827

Query: 841  MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ 900
            MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ
Sbjct: 828  MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ 887

Query: 901  SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS 960
            SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS
Sbjct: 888  SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS 947

Query: 961  PGESKLPLPLKADGKEEGTPQPESKSK--------------------------------- 987
            PGESKLPLPLKADGKEEGTPQPESKSK                                 
Sbjct: 948  PGESKLPLPLKADGKEEGTPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSF 1007

Query: 988  --------------------KSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGS 1027
                                KSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGS
Sbjct: 1008 HGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGS 1067

Query: 1028 PVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQY 1087
            PVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQY
Sbjct: 1068 PVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQY 1127

Query: 1088 IQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAE 1147
            IQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAE
Sbjct: 1128 IQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAE 1187

Query: 1148 VPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMS 1207
            VPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMS
Sbjct: 1188 VPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMS 1247

Query: 1208 MPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQ 1267
            MPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQ
Sbjct: 1248 MPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQ 1307

Query: 1268 RQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAK 1327
            RQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAK
Sbjct: 1308 RQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAK 1367

Query: 1328 RHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPP 1387
            RHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPP
Sbjct: 1368 RHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPP 1427

Query: 1388 QMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQR 1447
            QMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQR
Sbjct: 1428 QMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQR 1487

Query: 1448 INHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLEN 1507
            INHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLEN
Sbjct: 1488 INHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLEN 1547

Query: 1508 RMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRK 1567
            RMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRK
Sbjct: 1548 RMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRK 1607

Query: 1568 ITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVE 1627
            ITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVE
Sbjct: 1608 ITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVE 1667

Query: 1628 YFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDDDEEDE 1687
            YFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDDDEEDE
Sbjct: 1668 YFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDDDEEDE 1727

Query: 1688 EDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDK 1747
            EDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDK
Sbjct: 1728 EDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDK 1787

Query: 1748 LGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKEQEGKGDS 1807
            LGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKEQEGKGDS
Sbjct: 1788 LGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKEQEGKGDS 1847

Query: 1808 EEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKLLEDEPRS 1867
            EEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKLLEDEPRS
Sbjct: 1848 EEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKLLEDEPRS 1907

Query: 1868 RDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEH 1927
            RDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEH
Sbjct: 1908 RDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEH 1967

Query: 1928 PERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESIC 1987
            PERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESIC
Sbjct: 1968 PERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESIC 2027

Query: 1988 LPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPF 2047
            LPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPF
Sbjct: 2028 LPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPF 2087

Query: 2048 SRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLED 2107
            SRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLED
Sbjct: 2088 SRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLED 2147

Query: 2108 GVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDI 2167
            GVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDI
Sbjct: 2148 GVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDI 2207

Query: 2168 SISAVLNSLVASVICDVLFQIGQL 2191
            SISAVLNSLVASVICDVLFQIGQL
Sbjct: 2208 SISAVLNSLVASVICDVLFQIGQL 2231


>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
          Length = 2285

 Score = 2078 bits (5383), Expect = 0.0
 Identities = 1222/2361 (51%), Positives = 1448/2361 (61%), Gaps = 361/2361 (15%)

Query: 107  SAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGP 166
            +AA    +PP PP    P +   A  +  E AGG  E     A    +   A      GP
Sbjct: 8    AAASSLGNPPPPP----PSELKKAEQQQREEAGG--EAAAAAAAERGEMKAAAGQESEGP 61

Query: 167  AAVPE--FNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
            A  P           A ++GG GG         GG             A + G PG+   
Sbjct: 62   AVGPPQPLGKELQDGAESNGGGGG---------GG-------------AGSGGGPGAEPD 99

Query: 225  LQNSH-EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGA----- 278
            L+NS+    P    N+    + P  GGGGG   G G             A G G      
Sbjct: 100  LKNSNGNAGPRPALNN--NLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRS 157

Query: 279  -GAVAAAAAAA-------------AAAAGGGGGG--GYGG---SSAGYG----------- 308
              AVAAAAAA              AA   GGGGG   Y G   +S  +G           
Sbjct: 158  PSAVAAAAAAVFHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYP 217

Query: 309  ------------VLSSPRQQGGGMMMGPGGGGAASL-------SKAAAGSAAGGF--QRF 347
                         LSSPR   GG    PG G AA+        S A+A S++  F  QRF
Sbjct: 218  NRSAYPPPAPAYALSSPR---GGT---PGSGAAAAAGSKPPPSSSASASSSSSSFAQQRF 271

Query: 348  ----------AGQNQHPSGATPTLNQLLTSPSPMMRSY----GGSYPEYSSPSAPPPPPS 393
                      AG       ATPTLNQLLTSPS   R Y    GG Y            P+
Sbjct: 272  GAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSA-RGYQGYPGGDYSGGPQDGGAGKGPA 330

Query: 394  QPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPA-MSPGTPG--- 449
               SQ   A AAA    AA+G                    AQQRSH A MSPG+ G   
Sbjct: 331  DMASQCWGAAAAAAAAAAASG-------------------GAQQRSHHAPMSPGSSGGGG 371

Query: 450  -PTMGRSQ-GSPMDPMVMKRPQLYGMGSNPHSQ-------PQQSSPYPGGSYGPPGPQRY 500
             P     Q  SPMD M   RPQ YG G+NP+SQ       PQQ   YPG  YG   PQRY
Sbjct: 372  QPLARTPQPSSPMDQMGKMRPQPYG-GTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRY 430

Query: 501  PIGIQGRTPGAMAGMQYPQ-------QQDSGDATWKETFWL---------MPPQYGQQGV 544
            P+ +QGR   AM G+ Y Q       Q  SG     +T +            P Y QQ  
Sbjct: 431  PMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPP 490

Query: 545  S-------GYCQQGQ---------QPYYSQQP-------------------------QPP 563
            S        Y QQ Q         QP YSQQP                         QPP
Sbjct: 491  SQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPP 550

Query: 564  HLPPQAQ-----YLPSQ-------------------------SQQRYQPQQDMSQEGYGT 593
            +  PQAQ       P Q                         SQQR+ P Q++SQ+ +G+
Sbjct: 551  YSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGS 610

Query: 594  R--SQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQ 651
            +  S P +   K   ED+NL  Q RPSSLPDLSGSIDDLP GTE  LS  VS SG +SSQ
Sbjct: 611  QASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQ 670

Query: 652  GDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPP 711
            G+QSNPAQSPFSPH SPHL  I G PSPSPVGSP    QSRSGP+SPA++PG+QMPP+PP
Sbjct: 671  GEQSNPAQSPFSPHTSPHLPGIRG-PSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPP 729

Query: 712  GSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGIS 771
              QS+S  HP+++QS + Q+RG+M   QRNPQM QY   Q G ++SP    GGQ+H G+ 
Sbjct: 730  SGQSDSIMHPSMNQSSIAQDRGYM---QRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMG 786

Query: 772  SFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGIS---ANNQMHGQG 828
            S+QQ NS G+YGPQ  QYGPQG Y R P Y+ +P+A+Y   G   GI+   A  QMHGQ 
Sbjct: 787  SYQQ-NSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQP 845

Query: 829  PSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAA 888
               P G +P GRM  A M NRP+  NM++M P       Q G GM PP   +NRK QE A
Sbjct: 846  GIPPYGTLPPGRMSHASMGNRPYGPNMANMPP-------QVGSGMCPPPGGMNRKTQETA 898

Query: 889  AAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNS 948
             A M  AANS Q+R   +P MNQ G+M +  PY Q +N+ + ++N Q PPYSM   M N+
Sbjct: 899  VA-MHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANN 957

Query: 949  SAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNE 1008
            SA      +MM  G+ KL    K + K +GTP+ ESKSKKSSSSTTT EKITK+YELG E
Sbjct: 958  SAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGE 1017

Query: 1009 PERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELA 1068
            PERK+WVDRYL F EE+   +++LPAVG+KPLDL+RLYV VKEIGGL QVNKNKKWRELA
Sbjct: 1018 PERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELA 1077

Query: 1069 TNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKK-QPKLQPPSPAN 1127
            TNLNVGTSSSAASSLKKQYIQ L+AFECKIERGE+PPP++F+  D+KK QPK+QPPSPA 
Sbjct: 1078 TNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAG 1137

Query: 1128 SGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQG-GRSSTISVHDPFSDVS 1186
            SGS+QGPQTPQST S+SMAE  GDLKPPTPASTPH Q+ P+ G  RS+++ + D F+D S
Sbjct: 1138 SGSMQGPQTPQST-SSSMAE-GGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDGS 1195

Query: 1187 DSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNS 1246
            DS+F KRNSMTPN  YQ  M+  D+MGRM YEPNKDP+G MRK PGS +PFM+ GQ PN 
Sbjct: 1196 DSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGS-DPFMSSGQGPNG 1254

Query: 1247 SMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDR--------------------------- 1279
             M D Y+++    + N+ MG RQ +PYG  YDR                           
Sbjct: 1255 GMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNP 1314

Query: 1280 --------------------RHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQP-NYKRHM 1318
                                RH+ YG Q+  QG PSG P +   Q  +Y QQ  NYKR M
Sbjct: 1315 DSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPSGSP-FPSQQTTMYQQQQQNYKRPM 1373

Query: 1319 DGMYGPPAKRHEGDMYNMQYS---------------------------SQQQEMYNQYGG 1351
            DG YGPPAKRHEG+MY++ YS                           S QQ++YNQYG 
Sbjct: 1374 DGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGN 1433

Query: 1352 SY-----SGPDRRPI---QGQYPYPYSRERMQGP-GQIQTHGIPPQMMGGPLQSSSSEGP 1402
            +Y     +  +RRP    Q Q+P+ + R+R+  P G      +PPQMMGGP+Q+S+    
Sbjct: 1434 AYPATATAATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQ 1493

Query: 1403 QQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQ 1462
            Q  MW  RNDM Y Y NRQ  G   Q P Y G+NRTD+M+  DQR NHE  WPSH +++ 
Sbjct: 1494 QGTMWQGRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGSWPSHGTRQP 1553

Query: 1463 PYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPS-MK 1521
            PY   SA + P+TRPP  +YQ PPS+ NHI +  SPA   R +ENR SPSKSPFL S MK
Sbjct: 1554 PY-GPSAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMK 1612

Query: 1522 MQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRV 1581
            MQK  P VP S +   P QPP IRR+ITFPPGSVEA+QPVLKQRR++T KDI TPEAWRV
Sbjct: 1613 MQKAGPPVPASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRV 1672

Query: 1582 MMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILM 1641
            MMSLKSGLLAESTWALDTINILLYDD+++ TFNLSQL G LELLVEYFR+CLI+IFGIL 
Sbjct: 1673 MMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILK 1732

Query: 1642 EYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDDDEEDEEDEEEDSEKTESDE 1701
            EYEVGDP Q+ L         S     + G+EEE  E +    E+EE+EE      E+DE
Sbjct: 1733 EYEVGDPGQRTLLDPGRFSKVSSPAPMEGGEEEE--ELLGPKLEEEEEEEV----VENDE 1786

Query: 1702 KSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLHW 1761
            +  IA +  D  A    + K  SKFDKLP+KIV+KN+ FVVD SDKLGRVQEF+SGLLHW
Sbjct: 1787 E--IAFSGKDKPASENSEEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHW 1844

Query: 1762 QLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKK--EQEGKGDSEEQQ-------- 1811
            ++GGGDTTEHIQTHFESK E+ P R P  P   A RK     EG   + +Q+        
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSR-PHAPCPPAPRKHVTTAEGTPGTTDQEGPPPDGPP 1903

Query: 1812 EKSIIATIDDVLSARPGALPEDANPGPQT--ESSKFPFGIQQAKSHRNIKLLEDEPRSRD 1869
            EK I AT+DD+LS R   L ED     +   ESSKFPFGI  A+SHRNIK+LEDEP S+D
Sbjct: 1904 EKRITATMDDMLSTRSSTLTEDGAKSSEAIKESSKFPFGISPAQSHRNIKILEDEPHSKD 1963

Query: 1870 ETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPE 1929
            ETPLCT+  WQDSLAKRC+CVSN +RSLSFVPGND EMSKHPGL+LILGKLILLHH+HPE
Sbjct: 1964 ETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPE 2023

Query: 1930 RKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLP 1989
            RK+AP TYEKEE++D+GV+C+K EWWWDCLE+LR+NTLVTLANISGQLDLS Y ESICLP
Sbjct: 2024 RKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLP 2083

Query: 1990 ILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSR 2049
            +LDGLLHW VCPSAEAQDPF T+GPN+VLSPQRLVLETL KLSIQDNNVDLILATPPFSR
Sbjct: 2084 VLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSR 2143

Query: 2050 QEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGV 2109
             EK Y+T+VR++ DRKNPVCREM++ LL+NLAQGD+LAARAIAVQKGSIGNL+ FLED +
Sbjct: 2144 LEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSL 2203

Query: 2110 TMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISI 2169
               Q+QQSQ +L+HMQ PP EP SVDMM RAA+ALLA+A+VDEN SEF L+E RLLDIS+
Sbjct: 2204 AATQFQQSQASLLHMQNPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISV 2263

Query: 2170 SAVLNSLVASVICDVLFQIGQ 2190
            S ++NSLV+ VICDVLF IGQ
Sbjct: 2264 SPLMNSLVSQVICDVLFLIGQ 2284



 Score = 68.2 bits (165), Expect = 9e-11
 Identities = 241/1129 (21%), Positives = 331/1129 (29%), Gaps = 229/1129 (20%)

Query: 16   EAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHP 75
            + P+ PPHQQ             A +       QQ         Q Q Q   QQQQ Q P
Sbjct: 520  QQPSQPPHQQSP-----------APYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQP 568

Query: 76   ISNNNSLGGAGGGAPQPGPDMEQ---------PQHGGAKDSAAGGQADPPGPPLLSKPGD 126
              +  S   A    PQP     Q         P        + G QA        SK G 
Sbjct: 569  APSTLSQQAA---YPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQ 625

Query: 127  ED-----DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG-----GGGGPAAVPEFNNYY 176
            ED      + P       G  +   +G  G   P V+  G     G     A   F+ + 
Sbjct: 626  EDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHT 685

Query: 177  GSAAPASGGPG----GRAGPCFDQHGGQQSPGM--GMMHSASAAAAGAPGSMDPLQN--- 227
                P   GP     G          G  SP    G        +  +   M P  N   
Sbjct: 686  SPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSS 745

Query: 228  --SHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGG--------------GSGGGGGGGGA 271
                 GY        P YS P  G         GG              GS G  GG   
Sbjct: 746  IAQDRGYMQRN-PQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYG 804

Query: 272  GAGG----AGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG------YGVL----------- 310
              GG        A+  A   +A  AGG    G GG   G      YG L           
Sbjct: 805  PQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPPGRMSHASMG 864

Query: 311  ---------SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTL 361
                     + P Q G GM   PGG    +   A A   A      + QN+ P    P +
Sbjct: 865  NRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAAN----SIQNRPP--GYPNM 918

Query: 362  NQLLTSPSPMMRSYGGSYPEY----SSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGL 417
            NQ       MM    G+ P Y    +S +    P   P S        + G  A+  M  
Sbjct: 919  NQ-----GGMM----GTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMAASPEM-- 967

Query: 418  GKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNP 477
               MG      +PA     +      + GTP       + S       K  +LY +G  P
Sbjct: 968  ---MGLGDVKLTPATKMNNK------ADGTPKTESKSKKSSSSTTTNEKITKLYELGGEP 1018

Query: 478  HSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSG------DATWKET 531
              +               G    P    GR P  +  +    ++  G      +  W+E 
Sbjct: 1019 ERKMWVDRYLAFTEEKAMGMTNLP--AVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWREL 1076

Query: 532  FWLMPPQYGQQGVSGYCQQGQQPYYS--------QQPQP------------PHLPPQAQY 571
               +         S   +Q  Q  Y+        + P P            P + P +  
Sbjct: 1077 ATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPA 1136

Query: 572  LPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLP 631
                 Q    PQ   S    G   +PP     P+ +   L    R +S+  +  + +D  
Sbjct: 1137 GSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSV-GIQDAFNDGS 1195

Query: 632  TGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSP-VGSPVGSNQ 690
              T    +S     G   S        +  + P+  P+  S+   P   P + S  G N 
Sbjct: 1196 DSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPY-GSMRKAPGSDPFMSSGQGPNG 1254

Query: 691  SRSGPISPASIPG---SQMPPQ-------------------PPGSQSESSSHPALSQSPM 728
                P S A+ PG     M P+                   P G+ S  +  P L   P 
Sbjct: 1255 GMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNL--MPS 1312

Query: 729  PQERGFMAGTQRNPQMAQ--------YGPQ---QTGPSMSPHPSPGGQMHAGISSFQQSN 777
              + G  + ++  PQ  Q        YG Q   Q  PS SP PS    M+       +  
Sbjct: 1313 NPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRP 1372

Query: 778  SSGTYGPQMSQY-------------GPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQM 824
              GTYGP   ++             G       PPA    P++      P       NQ 
Sbjct: 1373 MDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLPPA-QPQPASQQQAAQPSPQQDVYNQY 1431

Query: 825  HGQGPSQPCGAVPLGRMPSAGMQNR-PF--------------------PGNMSSMTPSSP 863
                P+    A    R P+ G QN+ PF                    P  M     +S 
Sbjct: 1432 GNAYPATATAATE--RRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASA 1489

Query: 864  GMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSF----PGMNQSGLMASSS 919
             ++QQG    G    T N   +++  +  Q  A    +R           N  G   S  
Sbjct: 1490 EVAQQGTMWQGRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGSWPSHG 1549

Query: 920  PYSQPMNNSSSLMNTQAPP---YSMAPAMVNSSAASVGLADMMSPGESK 965
                P   S+ +     PP   Y   P+M N        A +  P E++
Sbjct: 1550 TRQPPYGPSAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENR 1598



 Score = 48.9 bits (115), Expect = 5e-05
 Identities = 223/1049 (21%), Positives = 330/1049 (31%), Gaps = 162/1049 (15%)

Query: 21   PPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQ-----------QQQQQQQQQQQQ 69
            PP+ Q     +        ++    H  QQQ    QQ            QQQ Q Q  Q 
Sbjct: 452  PPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQL 511

Query: 70   QQQQHPISNNNSL-GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDED 128
            Q  Q P S   S        AP P       QH  ++   +  QA  P      +   + 
Sbjct: 512  QSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSP----YQQQQPQQ 567

Query: 129  DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGG 188
             AP  + + A   Y  P      +QQ           P       + +GS A +      
Sbjct: 568  PAPSTLSQQAA--YPQP-----QSQQSQQTAYSQQRFPPPQELSQDSFGSQASS------ 614

Query: 189  RAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGA 248
             A       GGQ+   +  + S  ++     GS+D L    EG  +      PG S  G 
Sbjct: 615  -APSMTSSKGGQEDMNLS-LQSRPSSLPDLSGSIDDLPMGTEGALS------PGVSTSGI 666

Query: 249  GGGGGGGGGGGGGSGGGGGGGG-AGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGY 307
                G                   G  G     V + A+ A + +G        G+    
Sbjct: 667  SSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQ--- 723

Query: 308  GVLSSPRQQGG--GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
                 PR   G    +M P      S+++++     G  QR     Q P  ++P     L
Sbjct: 724  ---MPPRPPSGQSDSIMHP------SMNQSSIAQDRGYMQR---NPQMPQYSSPQPGSAL 771

Query: 366  TSPSP---------------MMRSYGGSYPEYSSPSAPPPPPSQ---PQSQAAAAGAAAG 407
            +   P                M SYG    +Y      P  P+    P +   +AG A G
Sbjct: 772  SPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGG 831

Query: 408  GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGR---SQGSPMDPM- 463
                   MG G  M  Q            + SH +M     GP M       GS M P  
Sbjct: 832  ----INPMGAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPP 887

Query: 464  --VMKRPQLYGMGSNPHSQPQQSSP--YP----GGSYGPPGPQRYPIGIQGRTPGAMAGM 515
              + ++ Q   +  +  +   Q+ P  YP    GG  G   P        G+   +MAGM
Sbjct: 888  GGMNRKTQETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPP-------YGQGINSMAGM 940

Query: 516  QYPQ-----------QQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPH 564
              PQ              +G A   E   L   +            G     S+  +   
Sbjct: 941  INPQGPPYSMGGTMANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSS 1000

Query: 565  LPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLS 624
                 + +    +   +P++ M  + Y   ++   A G  N   +      +P  L  L 
Sbjct: 1001 STTTNEKITKLYELGGEPERKMWVDRYLAFTEEK-AMGMTNLPAVG----RKPLDLYRLY 1055

Query: 625  GSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHAS---PHLSSIPGGPSPSP 681
             S+ ++   T+   +       +  + G  S+ A S    +          I  G  P P
Sbjct: 1056 VSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPP 1115

Query: 682  ---VGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGT 738
                 +    +Q +  P SPA   GS   PQ P S S S +     + P P      A T
Sbjct: 1116 DIFAAADSKKSQPKIQPPSPAG-SGSMQGPQTPQSTSSSMAEGGDLKPPTP------AST 1168

Query: 739  QRNPQMAQYGPQQTGPSMSPHPSPGGQ---MHAGISSFQQSNS---SGTYGPQMSQYGPQ 792
                  +Q  P    P MS   S G Q        S+FQ+ NS   +  Y P M+     
Sbjct: 1169 PH----SQIPPL---PGMSRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMM 1221

Query: 793  GNYSRPP---AYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNR 849
            G  S  P    Y  +  A  S P    G   N  M G   S+  G   LG +     Q+ 
Sbjct: 1222 GRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGM-GDPYSRAAGP-GLGNVAMGPRQHY 1279

Query: 850  PFPGNMSSMTPSSPGMSQQGGPGMGPP----MPTVNRKAQEAAAAVMQAAANSAQSRQGS 905
            P+ G    +  + PG+  +G    G P    MP+       + +          Q R  S
Sbjct: 1280 PYGGPYDRVR-TEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDS 1338

Query: 906  FPGMNQSGLMASSSPY---------SQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLA 956
            +     +    S SP+          Q  N    +  T  PP       + S   S G  
Sbjct: 1339 YGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQG 1398

Query: 957  DMMSPGESKLP--LPLKADGKEEGTPQPE 983
                P + +LP   P  A  ++   P P+
Sbjct: 1399 ---QPQQQQLPPAQPQPASQQQAAQPSPQ 1424


>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
          Length = 2068

 Score = 1825 bits (4726), Expect = 0.0
 Identities = 1123/2277 (49%), Positives = 1334/2277 (58%), Gaps = 410/2277 (18%)

Query: 107  SAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGP 166
            +AA    +PP PP    P +   A  +  E AGG  E     A    +   A      GP
Sbjct: 8    AAASSLGNPPPPP----PSELKKAEQQQREEAGG--EAAAAAAAERGEMKAAAGQESEGP 61

Query: 167  AAVPE--FNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
            A  P           A ++GG GG         GG             A + G PG+   
Sbjct: 62   AVGPPQPLGKELQDGAESNGGGGG---------GG-------------AGSGGGPGAEPD 99

Query: 225  LQNSH-EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGA----- 278
            L+NS+    P    N+    + P  GGGGG   G G             A G G      
Sbjct: 100  LKNSNGNAGPRPALNN--NLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRS 157

Query: 279  -GAVAAAAAAA-------------AAAAGGGGGG--GYGG---SSAGYG----------- 308
              AVAAAAAA              AA   GGGGG   Y G   +S  +G           
Sbjct: 158  PSAVAAAAAAVFHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYP 217

Query: 309  ------------VLSSPRQQGGGMMMGPGGGGAASL-------SKAAAGSAAGGF--QRF 347
                         LSSPR   GG    PG G AA+        S A+A S++  F  QRF
Sbjct: 218  NRSAYPPPAPAYALSSPR---GGT---PGSGAAAAAGSKPPPSSSASASSSSSSFAQQRF 271

Query: 348  ----------AGQNQHPSGATPTLNQLLTSPSPMMRSY----GGSYPEYSSPSAPPPPPS 393
                      AG       ATPTLNQLLTSPS   R Y    GG Y            P+
Sbjct: 272  GAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSA-RGYQGYPGGDYSGGPQDGGAGKGPA 330

Query: 394  QPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPA-MSPGTPG--- 449
               SQ   A AAA    AA+G                    AQQRSH A MSPG+ G   
Sbjct: 331  DMASQCWGAAAAAAAAAAASG-------------------GAQQRSHHAPMSPGSSGGGG 371

Query: 450  -PTMGRSQ-GSPMDPMVMKRPQLYGMGSNPHSQ-------PQQSSPYPGGSYGPPGPQRY 500
             P     Q  SPMD M   RPQ YG G+NP+SQ       PQQ   YPG  YG   PQRY
Sbjct: 372  QPLARTPQPSSPMDQMGKMRPQPYG-GTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRY 430

Query: 501  PIGIQGRTPGAMAGMQYPQ-------QQDSGDATWKETFWL---------MPPQYGQQGV 544
            P+ +QGR   AM G+ Y Q       Q  SG     +T +            P Y QQ  
Sbjct: 431  PMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPP 490

Query: 545  S-------GYCQQGQ---------QPYYSQQP-------------------------QPP 563
            S        Y QQ Q         QP YSQQP                         QPP
Sbjct: 491  SQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPP 550

Query: 564  HLPPQAQ-----YLPSQ-------------------------SQQRYQPQQDMSQEGYGT 593
            +  PQAQ       P Q                         SQQR+ P Q++SQ+ +G+
Sbjct: 551  YSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGS 610

Query: 594  R--SQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQ 651
            +  S P +   K   ED+NL  Q RPSSLPDLSGSIDDLP GTE  LS  VS SG +SSQ
Sbjct: 611  QASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQ 670

Query: 652  GDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPP 711
            G+QSNPAQSPFSPH SPHL  I G PSPSPVGSP    QSRSGP+SPA++PG+QMPP+PP
Sbjct: 671  GEQSNPAQSPFSPHTSPHLPGIRG-PSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPP 729

Query: 712  GSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGIS 771
              QS+S  HP+++QS + Q+RG+M   QRNPQM QY   Q G ++SP    GGQ+H G+ 
Sbjct: 730  SGQSDSIMHPSMNQSSIAQDRGYM---QRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMG 786

Query: 772  SFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGIS---ANNQMHGQG 828
            S+QQ NS G+YGPQ  QYGPQG Y R P Y+ +P+A+Y   G   GI+   A  QMHGQ 
Sbjct: 787  SYQQ-NSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQP 845

Query: 829  PSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAA 888
               P G +P GRM  A M NRP+  NM++M P       Q G GM PP   +NRK QE A
Sbjct: 846  GIPPYGTLPPGRMSHASMGNRPYGPNMANMPP-------QVGSGMCPPPGGMNRKTQETA 898

Query: 889  AAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNS 948
             A M  AANS Q+R   +P MNQ G+M +  PY Q +N+ + ++N Q PPYSM   M N+
Sbjct: 899  VA-MHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANN 957

Query: 949  SAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNE 1008
            SA      +MM  G+ KL    K + K +GTP+ ESKSKKSSSSTTT EKITK+YELG E
Sbjct: 958  SAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGE 1017

Query: 1009 PERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELA 1068
            PERK+WVDRYL F EE+   +++LPAVG+KPLDL+RLYV VKEIGGL QVNKNKKWRELA
Sbjct: 1018 PERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELA 1077

Query: 1069 TNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKK-QPKLQPPSPAN 1127
            TNLNVGTSSSAASSLKKQYIQ L+AFECKIERGE+PPP++F+  D+KK QPK+QPPSPA 
Sbjct: 1078 TNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAG 1137

Query: 1128 SGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQG-GRSSTISVHDPFSDVS 1186
            SGS+QGPQTPQST S+SMAE  GDLKPPTPASTPH Q+ P+ G  RS+++ + D F+D S
Sbjct: 1138 SGSMQGPQTPQST-SSSMAE-GGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDGS 1195

Query: 1187 DSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNS 1246
            DS+F KRNSMTPN  YQ  M+  D+MGRM YEPNKDP+G MRK PG S+PFM+ GQ PN 
Sbjct: 1196 DSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPG-SDPFMSSGQGPNG 1254

Query: 1247 SMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPG 1306
             M D Y+++    + N+ MG RQ +PYG  YDR      +  PG G P G    G  QP 
Sbjct: 1255 GMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDR-----VRTEPGIG-PEGNMSTGAPQPN 1308

Query: 1307 LYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYP 1366
            L P  P+      GMY P         Y  Q   QQQ+ ++ YG  +S            
Sbjct: 1309 LMPSNPD-----SGMYSP-------SRYPPQQQQQQQQRHDSYGNQFS------------ 1344

Query: 1367 YPYSRERMQGPGQIQTHGIPPQMMGGPLQS-SSSEGPQQNMWAARNDMPYPYQNRQGPGG 1425
                           T G P    G P  S  ++   QQ   ++   +P P +NR  P  
Sbjct: 1345 ---------------TQGTP---SGSPFPSQQTTMYQQQQQVSSPAPLPRPMENRTSP-- 1384

Query: 1426 PTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTP 1485
                                               + P++ S   MQ    PP P+    
Sbjct: 1385 ----------------------------------SKSPFLHSGMKMQK-AGPPVPA---- 1405

Query: 1486 PSLPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIR 1545
                +HI+ AP                            V P +    +T PP       
Sbjct: 1406 ----SHIAPAP----------------------------VQPPMIRRDITFPP------- 1426

Query: 1546 REITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLY 1605
                   GSVEA+QPVLKQRR++T KDI TPEAWRVMMSLKSGLLAESTWALDTINILLY
Sbjct: 1427 -------GSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLY 1479

Query: 1606 DDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQS 1665
            DD+++ TFNLSQL G LELLVEYFR+CLI+IFGIL EYEVGDP Q+ L         S  
Sbjct: 1480 DDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPGRFSKVSSP 1539

Query: 1666 LADDSGKEEEDAECIDDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASK 1725
               + G+EEE  E +    E+EE+E    E  E+DE+  IA +  D  A    + K  SK
Sbjct: 1540 APMEGGEEEE--ELLGPKLEEEEEE----EVVENDEE--IAFSGKDKPASENSEEKLISK 1591

Query: 1726 FDKLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPR 1785
            FDKLP+KIV+KN+ FVVD SDKLGRVQEF+SGLLHW++GGGDTTEHIQTHFESK E+ P 
Sbjct: 1592 FDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELLP- 1650

Query: 1786 RRPPPPLSSAGRK--KEQEGKGDSEEQQ--------EKSIIATIDDVLSARPGALPEDAN 1835
             RP  P   A RK     EG   + +Q+        EK I AT+DD+LS R   L ED  
Sbjct: 1651 SRPHAPCPPAPRKHVTTAEGTPGTTDQEGPPPDGPPEKRITATMDDMLSTRSSTLTEDGA 1710

Query: 1836 PGPQT--ESSKFPFGIQQAKSHRNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNI 1893
               +   ESSKFPFGI  A+SHRNIK+LEDEP S+DETPLCT+  WQDSLAKRC+CVSN 
Sbjct: 1711 KSSEAIKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNT 1770

Query: 1894 VRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACSKDE 1953
            +RSLSFVPGND EMSKHPGL+LILGKLILLHH+HPERK+AP TYEKEE++D+GV+C+K E
Sbjct: 1771 IRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVE 1830

Query: 1954 WWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVG 2013
            WWWDCLE+LR+NTLVTLANISGQLDLS Y ESICLP+LDGLLHW VCPSAEAQDPF T+G
Sbjct: 1831 WWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLG 1890

Query: 2014 PNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMS 2073
            PN+VLSPQRLVLETL KLSIQDNNVDLILATPPFSR EK Y+T+VR++ DRKNPVCREM+
Sbjct: 1891 PNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMA 1950

Query: 2074 MALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPS 2133
            + LL+NLAQGD+LAARAIAVQKGSIGNL+ FLED +   Q+QQSQ +L+HMQ PP EP S
Sbjct: 1951 VVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEPTS 2010

Query: 2134 VDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQ 2190
            VDMM RAA+ALLA+A+VDEN SEF L+E RLLDIS+S ++NSLV+ VICDVLF IGQ
Sbjct: 2011 VDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQ 2067



 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 215/971 (22%), Positives = 284/971 (29%), Gaps = 194/971 (19%)

Query: 16   EAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHP 75
            + P+ PPHQQ             A +       QQ         Q Q Q   QQQQ Q P
Sbjct: 520  QQPSQPPHQQSP-----------APYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQP 568

Query: 76   ISNNNSLGGAGGGAPQPGPDMEQ---------PQHGGAKDSAAGGQADPPGPPLLSKPGD 126
              +  S   A    PQP     Q         P        + G QA        SK G 
Sbjct: 569  APSTLSQQAA---YPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQ 625

Query: 127  ED-----DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG-----GGGGPAAVPEFNNYY 176
            ED      + P       G  +   +G  G   P V+  G     G     A   F+ + 
Sbjct: 626  EDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHT 685

Query: 177  GSAAPASGGPG----GRAGPCFDQHGGQQSPGM--GMMHSASAAAAGAPGSMDPLQN--- 227
                P   GP     G          G  SP    G        +  +   M P  N   
Sbjct: 686  SPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSS 745

Query: 228  --SHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGG--------------GSGGGGGGGGA 271
                 GY        P YS P  G         GG              GS G  GG   
Sbjct: 746  IAQDRGYMQRN-PQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYG 804

Query: 272  GAGG----AGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG------YGVL----------- 310
              GG        A+  A   +A  AGG    G GG   G      YG L           
Sbjct: 805  PQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPPGRMSHASMG 864

Query: 311  ---------SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTL 361
                     + P Q G GM   PGG    +   A A   A      + QN+ P    P +
Sbjct: 865  NRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAAN----SIQNRPP--GYPNM 918

Query: 362  NQLLTSPSPMMRSYGGSYPEY----SSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGL 417
            NQ       MM    G+ P Y    +S +    P   P S        + G  A+  M  
Sbjct: 919  NQ-----GGMM----GTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMAASPEM-- 967

Query: 418  GKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNP 477
               MG      +PA     +      + GTP       + S       K  +LY +G  P
Sbjct: 968  ---MGLGDVKLTPATKMNNK------ADGTPKTESKSKKSSSSTTTNEKITKLYELGGEP 1018

Query: 478  HSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSG------DATWKET 531
              +               G    P    GR P  +  +    ++  G      +  W+E 
Sbjct: 1019 ERKMWVDRYLAFTEEKAMGMTNLP--AVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWREL 1076

Query: 532  FWLMPPQYGQQGVSGYCQQGQQPYYS--------QQPQP------------PHLPPQAQY 571
               +         S   +Q  Q  Y+        + P P            P + P +  
Sbjct: 1077 ATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPA 1136

Query: 572  LPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLP 631
                 Q    PQ   S    G   +PP     P+ +   L    R +S+    G  D   
Sbjct: 1137 GSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSV----GIQDAFN 1192

Query: 632  TGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQS 691
             G+++T     S +          NP   P     S + S + G  S  P   P GS   
Sbjct: 1193 DGSDSTFQKRNSMT---------PNPGYQP-----SMNTSDMMGRMSYEPNKDPYGS--M 1236

Query: 692  RSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQ 751
            R  P S   +   Q P    G     ++ P L           M   Q  P    Y   +
Sbjct: 1237 RKAPGSDPFMSSGQGPNGGMGDPYSRAAGPGLGNVA-------MGPRQHYPYGGPYDRVR 1289

Query: 752  TGPSMSPHPSPGGQMHAGI--SSFQQSN-SSGTYGPQMSQYGPQGNYSRPPAYSGVPSA- 807
            T P + P     G M  G    +   SN  SG Y P  S+Y PQ    +   +    +  
Sbjct: 1290 TEPGIGPE----GNMSTGAPQPNLMPSNPDSGMYSP--SRYPPQQQQQQQQRHDSYGNQF 1343

Query: 808  SYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQ 867
            S  G   G    +      Q   Q     PL R     M+NR  P     +     GM  
Sbjct: 1344 STQGTPSGSPFPSQQTTMYQQQQQVSSPAPLPR----PMENRTSPSKSPFL---HSGMKM 1396

Query: 868  QGGPGMGPPMP 878
            Q     GPP+P
Sbjct: 1397 QKA---GPPVP 1404



 Score = 45.4 bits (106), Expect = 6e-04
 Identities = 201/931 (21%), Positives = 296/931 (31%), Gaps = 144/931 (15%)

Query: 21   PPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQ-----------QQQQQQQQQQQQ 69
            PP+ Q     +        ++    H  QQQ    QQ            QQQ Q Q  Q 
Sbjct: 452  PPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQL 511

Query: 70   QQQQHPISNNNSL-GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDED 128
            Q  Q P S   S        AP P       QH  ++   +  QA  P      +   + 
Sbjct: 512  QSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSP----YQQQQPQQ 567

Query: 129  DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGG 188
             AP  + + A   Y  P      +QQ           P       + +GS A +      
Sbjct: 568  PAPSTLSQQAA--YPQP-----QSQQSQQTAYSQQRFPPPQELSQDSFGSQASS------ 614

Query: 189  RAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGA 248
             A       GGQ+   +  + S  ++     GS+D L    EG  +      PG S  G 
Sbjct: 615  -APSMTSSKGGQEDMNLS-LQSRPSSLPDLSGSIDDLPMGTEGALS------PGVSTSGI 666

Query: 249  GGGGGGGGGGGGGSGGGGGGGG-AGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGY 307
                G                   G  G     V + A+ A + +G        G+    
Sbjct: 667  SSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQ--- 723

Query: 308  GVLSSPRQQGG--GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
                 PR   G    +M P      S+++++     G  QR     Q P  ++P     L
Sbjct: 724  ---MPPRPPSGQSDSIMHP------SMNQSSIAQDRGYMQR---NPQMPQYSSPQPGSAL 771

Query: 366  TSPSP---------------MMRSYGGSYPEYSSPSAPPPPPSQ---PQSQAAAAGAAAG 407
            +   P                M SYG    +Y      P  P+    P +   +AG A G
Sbjct: 772  SPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGG 831

Query: 408  GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGR---SQGSPMDPM- 463
                   MG G  M  Q            + SH +M     GP M       GS M P  
Sbjct: 832  ----INPMGAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPP 887

Query: 464  --VMKRPQLYGMGSNPHSQPQQSSP--YP----GGSYGPPGPQRYPIGIQGRTPGAMAGM 515
              + ++ Q   +  +  +   Q+ P  YP    GG  G   P        G+   +MAGM
Sbjct: 888  GGMNRKTQETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPP-------YGQGINSMAGM 940

Query: 516  QYPQ-----------QQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPH 564
              PQ              +G A   E   L   +            G     S+  +   
Sbjct: 941  INPQGPPYSMGGTMANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSS 1000

Query: 565  LPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLS 624
                 + +    +   +P++ M  + Y   ++   A G  N   +      +P  L  L 
Sbjct: 1001 STTTNEKITKLYELGGEPERKMWVDRYLAFTEEK-AMGMTNLPAVG----RKPLDLYRLY 1055

Query: 625  GSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHAS---PHLSSIPGGPSPSP 681
             S+ ++   T+   +       +  + G  S+ A S    +          I  G  P P
Sbjct: 1056 VSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPP 1115

Query: 682  ---VGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGT 738
                 +    +Q +  P SPA   GS   PQ P S S S +     + P P      A T
Sbjct: 1116 DIFAAADSKKSQPKIQPPSPAG-SGSMQGPQTPQSTSSSMAEGGDLKPPTP------AST 1168

Query: 739  QRNPQMAQYGPQQTGPSMSPHPSPGGQ---MHAGISSFQQSNS---SGTYGPQMSQYGPQ 792
                  +Q  P    P MS   S G Q        S+FQ+ NS   +  Y P M+     
Sbjct: 1169 PH----SQIPPL---PGMSRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMM 1221

Query: 793  GNYSRPP---AYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNR 849
            G  S  P    Y  +  A  S P    G   N  M G   S+  G   LG +     Q+ 
Sbjct: 1222 GRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGM-GDPYSRAAGP-GLGNVAMGPRQHY 1279

Query: 850  PFPGNMSSMTPSSPGMSQQGGPGMGPPMPTV 880
            P+ G    +  + PG+  +G    G P P +
Sbjct: 1280 PYGGPYDRVR-TEPGIGPEGNMSTGAPQPNL 1309


>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
           sapiens]
          Length = 1418

 Score =  116 bits (290), Expect = 3e-25
 Identities = 241/1007 (23%), Positives = 325/1007 (32%), Gaps = 151/1007 (14%)

Query: 59  QQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADP--- 115
           Q Q  +Q   + Q+  P    + +G  G   PQ GP  EQ   G   D    G   P   
Sbjct: 24  QGQDVRQPGPKGQKGEPGDIKDIVGPKGPPGPQ-GPAGEQGPRGDRGDKGEKGAPGPRGR 82

Query: 116 ---------PGPPLLSKPGDEDDAPPKMG-----EPAGGRYEHPGLGALGTQQPPVAV-- 159
                    PGPP    PG     PP +G     + AGG  E  G   LG  Q P+    
Sbjct: 83  DGEPGTPGNPGPP--GPPGPP--GPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMG 138

Query: 160 PGGGGGPAAVPEFNNYYGSAA----PASGGPGGRAGPCF-------DQHGGQQSPGMGMM 208
           P G  GPA  P    + G+      P   GP G  GP         D   G+        
Sbjct: 139 PRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERG 198

Query: 209 HSASAAAAGAPGSMD-PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG-------- 259
                 A G PG+   P    H GYP            PG  G  G  G  G        
Sbjct: 199 PPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEA-GAPGVKGESGSPGENGSPGPMGPR 257

Query: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV---------- 309
           G  G  G  G AGA GA         A      G  GG G+ G+    G           
Sbjct: 258 GLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPE 317

Query: 310 -LSSPRQQGG--------GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN--QHPSGAT 358
               PR + G        G    PG  G      +A      G   F G      P GAT
Sbjct: 318 GAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGAT 377

Query: 359 PTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAG--AAAGGQQAAAGMG 416
             L     +  P +  + G       P      P+ PQ     AG     G +    G+G
Sbjct: 378 GPLGPKGQTGEPGIAGFKGEQGPKGEPG-----PAGPQGAPGPAGEEGKRGARGEPGGVG 432

Query: 417 LGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPT-MGRSQGSPMDPMVMKRPQLYG--- 472
                G + A  +  +      + P  +PG  GP+ +   +G+  DP     P L G   
Sbjct: 433 PIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARG 492

Query: 473 -MGSNPHSQPQ-----QSSPYPGGSYGPPGPQ--RYPIGIQGRTPGAMAGMQYPQQQDSG 524
             G    + PQ       +P   G  GPPGPQ  R   G+ G  PG       P +    
Sbjct: 493 LTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMG-FPGPKGANGEPGKAGEK 551

Query: 525 DATWKETFWLMPPQYGQQGVSG-------YCQQGQQ-----PYYSQQPQPPHLPPQAQYL 572
                     +P + G+ G +G         ++G+Q       +   P PP  P +    
Sbjct: 552 GLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEG--- 608

Query: 573 PSQSQQRYQPQQDMSQEGYGTRSQP--PLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDL 630
             +   +  P +  +    G R +   P   G P  + L     + P  LP   G+  D 
Sbjct: 609 -GKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGL-----QGPRGLPGTPGT--DG 660

Query: 631 PTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQ 690
           P G     S      G+    G Q  P +   +  A P       G    P G+P G + 
Sbjct: 661 PKGA----SGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVG-EKGPEGAP-GKDG 714

Query: 691 SR--SGPISPASIPGSQ------MPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNP 742
            R  +GPI P    G+        PP P GS     +     ++  P   GF      + 
Sbjct: 715 GRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADG 774

Query: 743 QMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYS 802
           Q    G Q          +PG Q  +G    Q    +G  GP+ ++ G QG    PP  +
Sbjct: 775 QPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQ--GPTGVTGPKGAR-GAQG----PPGAT 827

Query: 803 GVPSASYSGPGPGMGISANNQMHGQGPSQPCGA-VPLGRMPSAGMQNRPFPGNMSSMTPS 861
           G P A+     PG    +N      GP  P G   P G    +G   R   G      P+
Sbjct: 828 GFPGAAGRVGPPG----SNGNPGPPGPPGPSGKDGPKGARGDSGPPGR--AGEPGLQGPA 881

Query: 862 SPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPY 921
            P   ++G PG   P         +  A          Q  +  FPG+          P 
Sbjct: 882 GP-PGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGL--------PGPS 932

Query: 922 SQP-MNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLP 967
            +P    +      + PP  + P  +   A   G     SPG    P
Sbjct: 933 GEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG--SPGADGPP 977



 Score =  108 bits (271), Expect = 4e-23
 Identities = 179/653 (27%), Positives = 212/653 (32%), Gaps = 103/653 (15%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS-KPGDEDDAPPKMGEPA--GG 140
            GA G     GP  E+ + G    S   G   PPGPP    KPGD+   P + G P   G 
Sbjct: 570  GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQG-VPGEAGAPGLVGP 628

Query: 141  RYEHPGLGALGTQQPPVAVPGGGG--GPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHG 198
            R E    G  G+       PG  G  GP  +P          P + GP G +GP     G
Sbjct: 629  RGERGFPGERGS-------PGAQGLQGPRGLP--------GTPGTDGPKGASGPA-GPPG 672

Query: 199  GQQSPGMGMMHSASAAA--AGAPGSM-DPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGG 255
             Q  PG+  M     AA  AG  G   D  +   EG P        G + P    G  G 
Sbjct: 673  AQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGR--GLTGPIGPPGPAGA 730

Query: 256  GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
             G  G  G  G  G AGA GA            A  AG  G  G  G+    G       
Sbjct: 731  NGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGD 790

Query: 316  QGGGMMMGPGGG-GAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRS 374
             G     GP G  G    +       A G Q   G    P  A                 
Sbjct: 791  AGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAA----------------- 833

Query: 375  YGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAA-GGQQAAAGMGLGKDMGAQYAAASPAWA 433
             G   P  S+ +  PP P  P  +    GA    G    AG     + G Q  A  P   
Sbjct: 834  -GRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAG-----EPGLQGPAGPPGEK 887

Query: 434  AAQQRSHPAMSPGTPGPTMGRSQ----GSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG 489
                   P+ + G PGP     Q    G P        P L G    P    +Q +P   
Sbjct: 888  GEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPG---KQGAPGAS 944

Query: 490  GSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQ 549
            G  GPPGP   P G+ G  P    G +     D             P + G  GV G   
Sbjct: 945  GDRGPPGPVGPP-GLTG--PAGEPGREGSPGADGP-----------PGRDGAAGVKGDRG 990

Query: 550  QGQQPYYSQQPQPPHLPPQAQYLPSQSQQ-RYQPQQDMSQEG-YGTRS-QPPLAP----- 601
            +         P PP  P  A     Q  +     Q  M   G  G R  Q P  P     
Sbjct: 991  ETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKG 1050

Query: 602  --GKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQ 659
              G+P    L        + L  L G     P G     S    ASG     G +  P  
Sbjct: 1051 EAGEPGERGLK--GHRGFTGLQGLPG-----PPGP----SGDQGASGPAGPSGPRGPPG- 1098

Query: 660  SPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPG 712
             P  P      + IPG     P+G P    + RSG   PA  PG+  PP PPG
Sbjct: 1099 -PVGPSGKDGANGIPG-----PIGPP--GPRGRSGETGPAGPPGNPGPPGPPG 1143



 Score =  106 bits (264), Expect = 3e-22
 Identities = 214/848 (25%), Positives = 271/848 (31%), Gaps = 130/848 (15%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
            G  GG    GP  E+   G        G A P G P   + G    A PK      GR  
Sbjct: 426  GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAP--GERGPSGLAGPKGANGDPGRPG 483

Query: 144  HPGL-GALG-TQQPPVAVPGGGGGPAAVPEFNNYYGSAAP--ASGGPG------------ 187
             PGL GA G T +P  A P G  GP+  P  +   G   P  A G PG            
Sbjct: 484  EPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANG 543

Query: 188  --GRAGPCFDQHGGQQSPGMGMM--HSASAAAAGAPGSMDPL-QNSHEGYPN-SQCNHYP 241
              G+AG    + G   +PG+  +        AAG PG   P  +   +G P  S     P
Sbjct: 544  EPGKAG----EKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLP 599

Query: 242  GYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG 301
            G   P   GG  G  G  G +G  G  G  G  G      +  A       G  G  G  
Sbjct: 600  GPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTD 659

Query: 302  GSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
            G     G    P  QG   + G PG  GAA ++         G +   G      G    
Sbjct: 660  GPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRG-- 717

Query: 361  LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
            L   +  P P      G+  E      PP P     ++ A       G    AG      
Sbjct: 718  LTGPIGPPGP-----AGANGE-KGEVGPPGPAGSAGARGAPGERGETGPPGPAGFA---- 767

Query: 421  MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
             G   A   P     Q  +      G PGP        P  P  +  P+    G+     
Sbjct: 768  -GPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPK----GARGAQG 822

Query: 481  PQQSSPYPG--GSYGPPGPQRYPIGIQGRTPGAMAGMQYPQ--QQDSGDATWKETFWLMP 536
            P  ++ +PG  G  GPPG    P G  G  P   +G   P+  + DSG           P
Sbjct: 823  PPGATGFPGAAGRVGPPGSNGNP-GPPG--PPGPSGKDGPKGARGDSG-----------P 868

Query: 537  P----QYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYG 592
            P    + G QG +G   +  +P     P     PP  Q L  Q      P Q   + G+ 
Sbjct: 869  PGRAGEPGLQGPAGPPGEKGEPG-DDGPSGAEGPPGPQGLAGQRGIVGLPGQ-RGERGFP 926

Query: 593  TRSQPPLAPGKPNHEDLNLIQ-QERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQ 651
                P   PGK      +  +    P   P L+G   +                G+   +
Sbjct: 927  GLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVK 986

Query: 652  GDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPP 711
            GD+             P  S  P GP+           Q   GP  PA   G Q P  P 
Sbjct: 987  GDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPR 1046

Query: 712  GSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGIS 771
            G + E+           P ERG              GP          P P G   A   
Sbjct: 1047 GDKGEAGE---------PGERGLKGHRGFTGLQGLPGP----------PGPSGDQGA--- 1084

Query: 772  SFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHG-QGPS 830
                   SG  GP     GP+G                  PGP +G S  +  +G  GP 
Sbjct: 1085 -------SGPAGPS----GPRG-----------------PPGP-VGPSGKDGANGIPGPI 1115

Query: 831  QPCGAVPLGRMPSAGMQNRP-FPGNMSSMTPSSPGMSQQGGPGMGP----PMPTVNRKAQ 885
             P G  P GR    G    P  PG      P  PG+      G+GP    P P    +A 
Sbjct: 1116 GPPG--PRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGPDPLQYMRAD 1173

Query: 886  EAAAAVMQ 893
            +AA  + Q
Sbjct: 1174 QAAGGLRQ 1181


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score =  114 bits (286), Expect = 8e-25
 Identities = 209/815 (25%), Positives = 263/815 (32%), Gaps = 119/815 (14%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGP---PLLSKPGDEDDAPPKMGEPAGG 140
            G  G    PG        G A +  A G   P GP   P    P  E  AP   G P G 
Sbjct: 462  GEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAG-PRGA 520

Query: 141  RYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQ 200
              E PG   +        +PG  GGP +  +         P S G  GR GP     G +
Sbjct: 521  AGE-PGRDGVPGGPGMRGMPGSPGGPGSDGK------PGPPGSQGESGRPGPP-GPSGPR 572

Query: 201  QSPG-MGMM----------HSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAG 249
              PG MG             +      G PG   P   + E  P       PG + PG  
Sbjct: 573  GQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGP----PGPTGPGGD 628

Query: 250  GGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV 309
             G  G  G  G  G  G GG  G  G          A A  A GG G  G  G     G+
Sbjct: 629  KGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGL 688

Query: 310  LSSPRQQGGGMMMGP-GGGGAASLSKAAAGSAAGGFQRFAGQ------------------ 350
              +P  +GG    GP GG GAA        +   G Q   G+                  
Sbjct: 689  AGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGG 748

Query: 351  --------NQHPSGATPTLNQLLTSPSPMMRSYGGS--YPEYSSPSAPPPPPSQPQSQAA 400
                       P G T  +     +  P  +  GG+   P  + P   P    +      
Sbjct: 749  PGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGP 808

Query: 401  AAGAAAGGQQA-AAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSP 459
            A    A GQ     G G     G +     P  A     S PA  PG  G  +   +GSP
Sbjct: 809  AGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQG--VKGERGSP 866

Query: 460  MDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQ 519
              P     P   G+   P S      P P GS G  GP   P G  G  PG+  G+  P 
Sbjct: 867  GGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPG-PAGNTG-APGS-PGVSGP- 922

Query: 520  QQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQR 579
            + D+G    K +    P   G  G  G               PP +P             
Sbjct: 923  KGDAGQPGEKGS----PGAQGPPGAPGPLGIAGITGARGLAGPPGMP------------- 965

Query: 580  YQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLS 639
              P+     +G    S  P A G              P  LP L+G+  +          
Sbjct: 966  -GPRGSPGPQGVKGESGKPGANGLSGERG-----PPGPQGLPGLAGTAGEPGRDGNPGSD 1019

Query: 640  SAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPS-PSPVGSPVGSNQSR--SGPI 696
                  GS   +GD+          + SP     PG P  P PVG P G +  R  SGP 
Sbjct: 1020 GLPGRDGSPGGKGDRGE--------NGSPGAPGAPGHPGPPGPVG-PAGKSGDRGESGPA 1070

Query: 697  SPASIP---GSQMPPQPPGSQSESSSHPALSQSPMPQERGFMA--GTQRNPQMAQYGPQ- 750
             PA  P   GS+  P P G + +         + +   RGF    G   +P     GP  
Sbjct: 1071 GPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSP-----GPAG 1125

Query: 751  QTGPSMSPHPSPGGQMHAGISSFQ-QSNSSGTYGPQMSQYGPQGNYSR-----PPAYSGV 804
            Q G   SP P+ G +   G S    +  +SG  GP +   GP+GN         P + G 
Sbjct: 1126 QQGAIGSPGPA-GPRGPVGPSGPPGKDGTSGHPGP-IGPPGPRGNRGERGSEGSPGHPGQ 1183

Query: 805  PS--ASYSGPGPGMGISANNQMHGQGPSQPCGAVP 837
            P        PGP  G      + G G  +  G  P
Sbjct: 1184 PGPPGPPGAPGPCCGGVGAAAIAGIGGEKAGGFAP 1218



 Score =  107 bits (266), Expect = 2e-22
 Identities = 221/878 (25%), Positives = 279/878 (31%), Gaps = 151/878 (17%)

Query: 65  QQQQQQQQQHPISNNNSLGGAGG---GAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLL 121
           Q    Q   + + +  ++GG  G    A  PGP       G      + G   PPG P  
Sbjct: 149 QNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQ 208

Query: 122 SKPGDEDDAPPKMGE--PAG--GRYEHPGL-GALGTQQPPVAVPGGGGGPAAVPEFNNYY 176
           + P      P  +G   PAG  G    PG  G  G   PP     G  GPA +P F    
Sbjct: 209 AGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPP-----GIKGPAGIPGFPGMK 263

Query: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ 236
           G       G  GR G    + G   +PG+    +      GAPG M P      G P  +
Sbjct: 264 GHR-----GFDGRNG----EKGETGAPGL-KGENGLPGENGAPGPMGP-----RGAPGER 308

Query: 237 CNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG 296
                   RPG  G  G         G  G  G  G  G       A    +  A G  G
Sbjct: 309 -------GRPGLPGAAGA-------RGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVG 354

Query: 297 GGGYGGSSAGYGVLSSPRQQGGGMMMGPGG--------GGAASLSKAAAGSAAG-----G 343
             G  GS+   G    P  QG     GP G        GG   +  A    A G     G
Sbjct: 355 PAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARG 414

Query: 344 FQRFAGQNQHP----SGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQA 399
               AG N  P        P  N     P P         P              P    
Sbjct: 415 PPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPG 474

Query: 400 AAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGR-SQGS 458
           A     A G++ A G             A P     ++   PA   G PGP   R + G 
Sbjct: 475 ANGLPGAAGERGAPGF---------RGPAGPNGIPGEK--GPAGERGAPGPAGPRGAAGE 523

Query: 459 PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGP---PGPQRYPIGIQGRTPGAMAGM 515
           P    V   P + GM  +P        P P GS G    PGP   P G +G+ PG M   
Sbjct: 524 PGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPG-PSGPRGQ-PGVMG-- 579

Query: 516 QYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQ 575
            +P  + +  A  K      P   G QG  G  + G+       PQ P  P      P  
Sbjct: 580 -FPGPKGNDGAPGKNGERGGPGGPGPQGPPG--KNGE-----TGPQGPPGPTG----PGG 627

Query: 576 SQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTE 635
            +    P      +G      PP   GKP          +  +  P   G   D     E
Sbjct: 628 DKGDTGPPGPQGLQGLPGTGGPPGENGKPGEPG-----PKGDAGAPGAPGGKGDAGAPGE 682

Query: 636 ---ATLSSAVSASGSTSSQGDQ--SNPAQSPFSPHA--SPHLSSIPG-----------GP 677
                L+ A    G     G +     A  P  P A  +P L  +PG           G 
Sbjct: 683 RGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGD 742

Query: 678 SPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAG 737
              P G        + GP  P    G   P   PG + E  + P L           +AG
Sbjct: 743 KGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGA-PGLPG---------IAG 792

Query: 738 TQRNP-QMAQYGPQQTGPSMSP-----HPSPGGQMHAGISSFQ-QSNSSGTYGPQMSQYG 790
            + +P +  + GP   GP+  P     +  PGG+   G    + +    G  GP     G
Sbjct: 793 PRGSPGERGETGP--PGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGS-G 849

Query: 791 PQGNYSRPPAYSGVPSASYSGPGPG-MGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNR 849
           P G    PP   GV     S  GPG  G      + G  P       P G   S G    
Sbjct: 850 PAG----PPGPQGVKGERGSPGGPGAAGFPGARGLPGP-PGSNGNPGPPGPSGSPGKDGP 904

Query: 850 PFPGNMSSMTPSSPGMS----------QQGGPG-MGPP 876
           P P   ++  P SPG+S          ++G PG  GPP
Sbjct: 905 PGPAG-NTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPP 941



 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 180/778 (23%), Positives = 240/778 (30%), Gaps = 127/778 (16%)

Query: 160 PGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAP 219
           P G  GP  +P  N   G   P   G  G  GP          PG+        +    P
Sbjct: 107 PKGDPGPPGIPGRNGDPG--IPGQPGSPGSPGP----------PGI------CESCPTGP 148

Query: 220 GSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAG 279
            +  P  +S++           GY  P    G  G  G  G  G  G  G  G  G    
Sbjct: 149 QNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQ 208

Query: 280 AVAAAAAAAAAAAGGGGGGGYGGSS------AGYGVLSSPRQQGGGMMMG-PGGGGAASL 332
           A  +       A G  G  G  G S         G+   P  +G   + G PG  G    
Sbjct: 209 AGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGF 268

Query: 333 SKAAAGSAAGGFQRFAGQN-----------QHPSGATPTLNQLLTSPSPMMRSYGGSYPE 381
                     G     G+N             P GA     +     +   R   G+   
Sbjct: 269 DGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGARGS 328

Query: 382 YSSPSAPPPP-----PSQPQSQAAAAGAAAGGQQAAAGM----GLGKDMGAQYAAASP-- 430
              P  P PP     P  P ++     A + G   A G     G     GAQ     P  
Sbjct: 329 DGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGI 388

Query: 431 -AWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG 489
                 +    PA  PG PG    R    P            G    P  +     P   
Sbjct: 389 NGSPGGKGEMGPAGIPGAPGLMGARGPPGPA-----------GANGAPGLRGGAGEPGKN 437

Query: 490 GSYGPPGP--QRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGY 547
           G+ G PGP  +R   GI G  PGA       + +D  D +        P + G  G+ G 
Sbjct: 438 GAKGEPGPRGERGEAGIPG-VPGA-------KGEDGKDGS--------PGEPGANGLPGA 481

Query: 548 CQQGQQPYYSQQPQPPHLPPQ-----AQYLPSQSQQR---YQPQQDMSQEGYGTRSQP-- 597
             +   P +     P  +P +      +  P  +  R    +P +D    G G R  P  
Sbjct: 482 AGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGS 541

Query: 598 ---PLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLS--SAVSASGSTSSQG 652
              P + GKP     +  +  RP   P  SG     P G    +         G+    G
Sbjct: 542 PGGPGSDGKPGPPG-SQGESGRPGP-PGPSG-----PRGQPGVMGFPGPKGNDGAPGKNG 594

Query: 653 DQSNP-AQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPP 711
           ++  P    P  P      +   G P P+  G   G +    GP     +PG+  PP   
Sbjct: 595 ERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKG-DTGPPGPQGLQGLPGTGGPPGEN 653

Query: 712 GSQSESSSHPALSQSPMPQERGFM-AGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGI 770
           G   E            P  +G   A  +R P      P   G +  P P  GG+  AG 
Sbjct: 654 GKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPE-GGKGAAGP 712

Query: 771 SSFQQSNSSGTYGPQ--------MSQYGPQGNYSRP--PAYSGVPS----ASYSGP--GP 814
                  ++GT G Q        +   GP+G+   P  P   GVP        +GP   P
Sbjct: 713 PG--PPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPP 770

Query: 815 GMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPG 872
           G      ++  G  P  P  A P G     G    P P       P +PG  Q G PG
Sbjct: 771 GPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGF----PGAPG--QNGEPG 822



 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 110/363 (30%), Positives = 127/363 (34%), Gaps = 43/363 (11%)

Query: 82   LGGAGGGAPQPGPDMEQPQHGGAKDSAAG--GQADPPGPPLLSKPGDEDDAPPKMGEP-A 138
            L G  G    PGP    P     KD   G  G    PG P +S P  +   P + G P A
Sbjct: 880  LPGPPGSNGNPGPP--GPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGA 937

Query: 139  GGRYEHPG-LGALG-TQQPPVAVPGGGGGPAAVPEFNNYYG-SAAPASGGPGGRAGPCFD 195
             G    PG LG  G T    +A P G  GP   P      G S  P + G  G  GP   
Sbjct: 938  QGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGP--- 994

Query: 196  QHGGQQSPGMGMMHSASAAAAGAPGS--MDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGG 253
              G Q  PG+    +      G PGS  +     S  G  +   N  PG   PGA G  G
Sbjct: 995  -PGPQGLPGLAGT-AGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPG--APGAPGHPG 1050

Query: 254  GGG--GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLS 311
              G  G  G SG  G  G AG  GA   A +  A       G  G  G  G++   G   
Sbjct: 1051 PPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRG 1110

Query: 312  SPRQQGGGMMMGPGGGGAASLSKAAAGSAA----GGFQRFAGQNQHPSGATPTLNQLLTS 367
             P   G     GP G   A  S   AG        G     G + HP    P        
Sbjct: 1111 FPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGP-------- 1162

Query: 368  PSPM----MRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGA 423
            P P      R   GS P +     PP PP  P       G   GG  AAA  G+G +   
Sbjct: 1163 PGPRGNRGERGSEGS-PGHPGQPGPPGPPGAP-------GPCCGGVGAAAIAGIGGEKAG 1214

Query: 424  QYA 426
             +A
Sbjct: 1215 GFA 1217



 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 89/334 (26%), Positives = 115/334 (34%), Gaps = 59/334 (17%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLL-------SKPGDE-----DDAP 131
            G  G    PGP   + + G    +   G+  PPGP  L        +PG +     D  P
Sbjct: 963  GMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLP 1022

Query: 132  PKMGEPAG--GRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG-GPGG 188
             + G P G   R E+   GA G    P   P G  GPA         G A PA   GP G
Sbjct: 1023 GRDGSPGGKGDRGENGSPGAPGAPGHPG--PPGPVGPAGKSGDRGESGPAGPAGAPGPAG 1080

Query: 189  RAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGA 248
              G       G Q P      +    AAG  G        H G+P +          PGA
Sbjct: 1081 SRGA-----PGPQGPRGDKGETGERGAAGIKG--------HRGFPGN----------PGA 1117

Query: 249  GGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308
             G  G  G      G  G  G AG  G    +        +   G  G  G  G+    G
Sbjct: 1118 PGSPGPAGQ----QGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERG 1173

Query: 309  VLSSPRQQGGGMMMGP--------GGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
               SP   G     GP        GG GAA+++    G  AGGF  + G    P      
Sbjct: 1174 SEGSPGHPGQPGPPGPPGAPGPCCGGVGAAAIA-GIGGEKAGGFAPYYG--DEPMDFKIN 1230

Query: 361  LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQ 394
             ++++TS    ++S  G      SP      P++
Sbjct: 1231 TDEIMTS----LKSVNGQIESLISPDGSRKNPAR 1260



 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 95/400 (23%), Positives = 127/400 (31%), Gaps = 79/400 (19%)

Query: 560 PQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSS 619
           PQPP  P +    P   Q    P+ D    G   R+  P  PG+P            P S
Sbjct: 89  PQPPTAPTR----PPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPG----------SPGS 134

Query: 620 LPDLSGSIDDLPTGTE--------ATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLS 671
            P   G  +  PTG +          + S V+  G     G    PA  P  P   P  S
Sbjct: 135 -PGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPG----PAGPP-GPPGPPGTS 188

Query: 672 SIPGGP-SPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESS--SHPALSQSP- 727
             PG P SP   G P      ++GP  P   PG+  P  P G   ES     P     P 
Sbjct: 189 GHPGSPGSPGYQGPP--GEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPG 246

Query: 728 ------------MPQERGFMAGTQRNPQMAQYG----------PQQTGP--SMSPHPSPG 763
                        P  +G      RN +  + G          P + G    M P  +PG
Sbjct: 247 PPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG 306

Query: 764 GQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSA--SYSGPGPGMGISAN 821
            +   G+     +  +        Q GP G    PP  +G P +  +    GP     +N
Sbjct: 307 ERGRPGLPGAAGARGNDGARGSDGQPGPPG----PPGTAGFPGSPGAKGEVGPAGSPGSN 362

Query: 822 NQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPG-------MG 874
                +G   P G         AG Q  P P  ++        M   G PG        G
Sbjct: 363 GAPGQRGEPGPQG--------HAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARG 414

Query: 875 PPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGL 914
           PP P     A        +   N A+   G      ++G+
Sbjct: 415 PPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGI 454



 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 66/226 (29%), Positives = 79/226 (34%), Gaps = 28/226 (12%)

Query: 79   NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGP-PLLSKPGDEDDAPPKMGEP 137
            N    G  G    PG   ++ ++G      A G   PPGP     K GD  ++ P    P
Sbjct: 1015 NPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGP--AGP 1072

Query: 138  AGGRYEHPGLGALGTQQP-PVAVPGGGGGPAAVPEFNNYYGS-AAPASGGPGGRAGPCFD 195
            AG        GA G Q P       G  G A +     + G+  AP S GP G       
Sbjct: 1073 AGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAG------- 1125

Query: 196  QHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ-CNHYPGYSRPGAGGGGGG 254
            Q G   SPG           AG  G + P      G P     + +PG   P    G  G
Sbjct: 1126 QQGAIGSPG----------PAGPRGPVGP-----SGPPGKDGTSGHPGPIGPPGPRGNRG 1170

Query: 255  GGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
              G  G  G  G  G  G  GA         AAA A  GG   GG+
Sbjct: 1171 ERGSEGSPGHPGQPGPPGPPGAPGPCCGGVGAAAIAGIGGEKAGGF 1216



 Score = 55.5 bits (132), Expect = 6e-07
 Identities = 63/223 (28%), Positives = 70/223 (31%), Gaps = 38/223 (17%)

Query: 80   NSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAG 139
            N   GA G    PGP       G + D    G A P G P    P     AP   G P G
Sbjct: 1037 NGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAP---GPAGSRGAPGPQG-PRG 1092

Query: 140  GRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGG 199
             + E    GA G +      PG  G P +           +P   GP G  GP       
Sbjct: 1093 DKGETGERGAAGIKGHR-GFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGP------- 1144

Query: 200  QQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG 259
               PG           +G PG + P                PG   P    G  G  G  
Sbjct: 1145 SGPPG-------KDGTSGHPGPIGP----------------PG---PRGNRGERGSEGSP 1178

Query: 260  GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGG 302
            G  G  G  G  GA G   G V AAA A       GG   Y G
Sbjct: 1179 GHPGQPGPPGPPGAPGPCCGGVGAAAIAGIGGEKAGGFAPYYG 1221



 Score = 33.9 bits (76), Expect = 1.8
 Identities = 37/129 (28%), Positives = 44/129 (34%), Gaps = 13/129 (10%)

Query: 76   ISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMG 135
            I  +    G  G    PGP  +Q   G    +   G   P GPP   K G     P  +G
Sbjct: 1105 IKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPP--GKDGTSGH-PGPIG 1161

Query: 136  EPA--GGRYEHPGLGALG-TQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGP 192
             P   G R E    G+ G   QP    P G  GP          G  A A  G GG    
Sbjct: 1162 PPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCC-------GGVGAAAIAGIGGEKAG 1214

Query: 193  CFDQHGGQQ 201
             F  + G +
Sbjct: 1215 GFAPYYGDE 1223


>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
            sapiens]
          Length = 1487

 Score =  113 bits (283), Expect = 2e-24
 Identities = 238/995 (23%), Positives = 320/995 (32%), Gaps = 151/995 (15%)

Query: 71   QQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADP------------PGP 118
            Q+  P    + +G  G   PQ GP  EQ   G   D    G   P            PGP
Sbjct: 105  QKGEPGDIKDIVGPKGPPGPQ-GPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGP 163

Query: 119  PLLSKPGDEDDAPPKMG-----EPAGGRYEHPGLGALGTQQPPVAV--PGGGGGPAAVPE 171
            P    PG     PP +G     + AGG  E  G   LG  Q P+    P G  GPA  P 
Sbjct: 164  P--GPPGPP--GPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPG 219

Query: 172  FNNYYGSAA----PASGGPGGRAGPCF-------DQHGGQQSPGMGMMHSASAAAAGAPG 220
               + G+      P   GP G  GP         D   G+              A G PG
Sbjct: 220  PQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPG 279

Query: 221  SMD-PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG--------GGSGGGGGGGGA 271
            +   P    H GYP            PG  G  G  G  G        G  G  G  G A
Sbjct: 280  TPGLPGVKGHRGYPGLDGAKGEA-GAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPA 338

Query: 272  GAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV-----------LSSPRQQGG-- 318
            GA GA         A      G  GG G+ G+    G               PR + G  
Sbjct: 339  GAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTP 398

Query: 319  ------GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN--QHPSGATPTLNQLLTSPSP 370
                  G    PG  G      +A      G   F G      P GAT  L     +  P
Sbjct: 399  GSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEP 458

Query: 371  MMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAG--AAAGGQQAAAGMGLGKDMGAQYAAA 428
             +  + G       P      P+ PQ     AG     G +    G+G     G + A  
Sbjct: 459  GIAGFKGEQGPKGEPG-----PAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPG 513

Query: 429  SPAWAAAQQRSHPAMSPGTPGPT-MGRSQGSPMDPMVMKRPQLYG----MGSNPHSQPQ- 482
            +  +      + P  +PG  GP+ +   +G+  DP     P L G     G    + PQ 
Sbjct: 514  NRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQG 573

Query: 483  ----QSSPYPGGSYGPPGPQ--RYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMP 536
                  +P   G  GPPGPQ  R   G+ G  PG       P +              +P
Sbjct: 574  KVGPSGAPGEDGRPGPPGPQGARGQPGVMG-FPGPKGANGEPGKAGEKGLPGAPGLRGLP 632

Query: 537  PQYGQQGVSG-------YCQQGQQ-----PYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQ 584
             + G+ G +G         ++G+Q       +   P PP  P +      +   +  P +
Sbjct: 633  GKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEG----GKPGDQGVPGE 688

Query: 585  DMSQEGYGTRSQP--PLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAV 642
              +    G R +   P   G P  + L     + P  LP   G+  D P G     S   
Sbjct: 689  AGAPGLVGPRGERGFPGERGSPGAQGL-----QGPRGLPGTPGT--DGPKGA----SGPA 737

Query: 643  SASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSR--SGPISPAS 700
               G+    G Q  P +   +  A P       G    P G+P G +  R  +GPI P  
Sbjct: 738  GPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVG-EKGPEGAP-GKDGGRGLTGPIGPPG 795

Query: 701  IPGSQ------MPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGP 754
              G+        PP P GS     +     ++  P   GF      + Q    G Q    
Sbjct: 796  PAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAG 855

Query: 755  SMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGP 814
                  +PG Q  +G    Q    +G  GP+ ++ G QG    PP  +G P A+     P
Sbjct: 856  QKGDAGAPGPQGPSGAPGPQ--GPTGVTGPKGAR-GAQG----PPGATGFPGAAGRVGPP 908

Query: 815  GMGISANNQMHGQGPSQPCGA-VPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGM 873
            G    +N      GP  P G   P G    +G   R   G      P+ P   ++G PG 
Sbjct: 909  G----SNGNPGPPGPPGPSGKDGPKGARGDSGPPGR--AGEPGLQGPAGP-PGEKGEPGD 961

Query: 874  GPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQP-MNNSSSLM 932
              P         +  A          Q  +  FPG+          P  +P    +    
Sbjct: 962  DGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGL--------PGPSGEPGKQGAPGAS 1013

Query: 933  NTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLP 967
              + PP  + P  +   A   G     SPG    P
Sbjct: 1014 GDRGPPGPVGPPGLTGPAGEPGREG--SPGADGPP 1046



 Score =  108 bits (271), Expect = 4e-23
 Identities = 179/653 (27%), Positives = 212/653 (32%), Gaps = 103/653 (15%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS-KPGDEDDAPPKMGEPA--GG 140
            GA G     GP  E+ + G    S   G   PPGPP    KPGD+   P + G P   G 
Sbjct: 639  GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQG-VPGEAGAPGLVGP 697

Query: 141  RYEHPGLGALGTQQPPVAVPGGGG--GPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHG 198
            R E    G  G+       PG  G  GP  +P          P + GP G +GP     G
Sbjct: 698  RGERGFPGERGS-------PGAQGLQGPRGLP--------GTPGTDGPKGASGPA-GPPG 741

Query: 199  GQQSPGMGMMHSASAAA--AGAPGSM-DPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGG 255
             Q  PG+  M     AA  AG  G   D  +   EG P        G + P    G  G 
Sbjct: 742  AQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGR--GLTGPIGPPGPAGA 799

Query: 256  GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
             G  G  G  G  G AGA GA            A  AG  G  G  G+    G       
Sbjct: 800  NGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGD 859

Query: 316  QGGGMMMGPGGG-GAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRS 374
             G     GP G  G    +       A G Q   G    P  A                 
Sbjct: 860  AGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAA----------------- 902

Query: 375  YGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAA-GGQQAAAGMGLGKDMGAQYAAASPAWA 433
             G   P  S+ +  PP P  P  +    GA    G    AG     + G Q  A  P   
Sbjct: 903  -GRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAG-----EPGLQGPAGPPGEK 956

Query: 434  AAQQRSHPAMSPGTPGPTMGRSQ----GSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG 489
                   P+ + G PGP     Q    G P        P L G    P    +Q +P   
Sbjct: 957  GEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPG---KQGAPGAS 1013

Query: 490  GSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQ 549
            G  GPPGP   P G+ G  P    G +     D             P + G  GV G   
Sbjct: 1014 GDRGPPGPVGPP-GLTG--PAGEPGREGSPGADGP-----------PGRDGAAGVKGDRG 1059

Query: 550  QGQQPYYSQQPQPPHLPPQAQYLPSQSQQ-RYQPQQDMSQEG-YGTRS-QPPLAP----- 601
            +         P PP  P  A     Q  +     Q  M   G  G R  Q P  P     
Sbjct: 1060 ETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKG 1119

Query: 602  --GKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQ 659
              G+P    L        + L  L G     P G     S    ASG     G +  P  
Sbjct: 1120 EAGEPGERGLK--GHRGFTGLQGLPG-----PPGP----SGDQGASGPAGPSGPRGPPG- 1167

Query: 660  SPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPG 712
             P  P      + IPG     P+G P    + RSG   PA  PG+  PP PPG
Sbjct: 1168 -PVGPSGKDGANGIPG-----PIGPP--GPRGRSGETGPAGPPGNPGPPGPPG 1212



 Score =  106 bits (264), Expect = 3e-22
 Identities = 214/848 (25%), Positives = 271/848 (31%), Gaps = 130/848 (15%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
            G  GG    GP  E+   G        G A P G P   + G    A PK      GR  
Sbjct: 495  GEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAP--GERGPSGLAGPKGANGDPGRPG 552

Query: 144  HPGL-GALG-TQQPPVAVPGGGGGPAAVPEFNNYYGSAAP--ASGGPG------------ 187
             PGL GA G T +P  A P G  GP+  P  +   G   P  A G PG            
Sbjct: 553  EPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANG 612

Query: 188  --GRAGPCFDQHGGQQSPGMGMM--HSASAAAAGAPGSMDPL-QNSHEGYPN-SQCNHYP 241
              G+AG    + G   +PG+  +        AAG PG   P  +   +G P  S     P
Sbjct: 613  EPGKAG----EKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLP 668

Query: 242  GYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG 301
            G   P   GG  G  G  G +G  G  G  G  G      +  A       G  G  G  
Sbjct: 669  GPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTD 728

Query: 302  GSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
            G     G    P  QG   + G PG  GAA ++         G +   G      G    
Sbjct: 729  GPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRG-- 786

Query: 361  LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
            L   +  P P      G+  E      PP P     ++ A       G    AG      
Sbjct: 787  LTGPIGPPGP-----AGANGE-KGEVGPPGPAGSAGARGAPGERGETGPPGPAGFA---- 836

Query: 421  MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
             G   A   P     Q  +      G PGP        P  P  +  P+    G+     
Sbjct: 837  -GPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPK----GARGAQG 891

Query: 481  PQQSSPYPG--GSYGPPGPQRYPIGIQGRTPGAMAGMQYPQ--QQDSGDATWKETFWLMP 536
            P  ++ +PG  G  GPPG    P G  G  P   +G   P+  + DSG           P
Sbjct: 892  PPGATGFPGAAGRVGPPGSNGNP-GPPG--PPGPSGKDGPKGARGDSG-----------P 937

Query: 537  P----QYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYG 592
            P    + G QG +G   +  +P     P     PP  Q L  Q      P Q   + G+ 
Sbjct: 938  PGRAGEPGLQGPAGPPGEKGEPG-DDGPSGAEGPPGPQGLAGQRGIVGLPGQ-RGERGFP 995

Query: 593  TRSQPPLAPGKPNHEDLNLIQ-QERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQ 651
                P   PGK      +  +    P   P L+G   +                G+   +
Sbjct: 996  GLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVK 1055

Query: 652  GDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPP 711
            GD+             P  S  P GP+           Q   GP  PA   G Q P  P 
Sbjct: 1056 GDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPR 1115

Query: 712  GSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGIS 771
            G + E+           P ERG              GP          P P G   A   
Sbjct: 1116 GDKGEAGE---------PGERGLKGHRGFTGLQGLPGP----------PGPSGDQGA--- 1153

Query: 772  SFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHG-QGPS 830
                   SG  GP     GP+G                  PGP +G S  +  +G  GP 
Sbjct: 1154 -------SGPAGPS----GPRG-----------------PPGP-VGPSGKDGANGIPGPI 1184

Query: 831  QPCGAVPLGRMPSAGMQNRP-FPGNMSSMTPSSPGMSQQGGPGMGP----PMPTVNRKAQ 885
             P G  P GR    G    P  PG      P  PG+      G+GP    P P    +A 
Sbjct: 1185 GPPG--PRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGPDPLQYMRAD 1242

Query: 886  EAAAAVMQ 893
            +AA  + Q
Sbjct: 1243 QAAGGLRQ 1250


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score =  113 bits (282), Expect = 2e-24
 Identities = 243/968 (25%), Positives = 310/968 (32%), Gaps = 182/968 (18%)

Query: 88   GAPQP----GPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
            GAP P    GP  E  + G    S   G   PPGPP   K GD+ +A    G+P      
Sbjct: 194  GAPGPQGFQGPPGEPGEPGA---SGPMGPRGPPGPP--GKNGDDGEA----GKP------ 238

Query: 144  HPGLGALGTQQPPVAVPGGG-GGPAAVPEFNNYYG-SAAPASGGPGGRAGPCFDQHGGQQ 201
                G  G + PP      G  G A +P    + G S    + G  G AGP     G   
Sbjct: 239  ----GRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGP----KGEPG 290

Query: 202  SPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGG--GGGGGGGGG 259
            SPG            GAPG M P      G P  +        RPGA G  G  G  G  
Sbjct: 291  SPGEN----------GAPGQMGP-----RGLPGER-------GRPGAPGPAGARGNDGAT 328

Query: 260  GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGG 319
            G +G  G  G AG  G            A  A G  G  G  GS    GV   P   G  
Sbjct: 329  GAAGPPGPTGPAGPPG---------FPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPA 379

Query: 320  MMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYG--- 376
               GP G   A     A G  A G    AG    P    P+  Q    P     + G   
Sbjct: 380  GAAGPAGNPGADGQPGAKG--ANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPG 437

Query: 377  --GSYPEYSSPSAPPPPPSQ-PQSQAAAAG-AAAGGQQAAAGM-GLGKDMGAQYAAASPA 431
              GS  +  +   P P   Q P   A   G   A G+    G+ G   + G   +   P 
Sbjct: 438  APGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPG 497

Query: 432  WAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGS 491
                     PA   G+PGP      G    P    RP   G+           SP P G 
Sbjct: 498  ADGVAGPKGPAGERGSPGPA-----GPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGK 552

Query: 492  YGPPGPQRYPIGIQGR-----TPGA--MAG-MQYPQQQDSGDATWKETFWLMPPQYGQQG 543
             GPPG    P G  GR      PGA   AG M +P  + +            P + G++G
Sbjct: 553  TGPPG----PAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGE---------PGKAGERG 599

Query: 544  VSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGK 603
            V G    G      +  +     P     P+  +    P      +G    + PP   GK
Sbjct: 600  VPG--PPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGK 657

Query: 604  PNHEDLNLIQQERPSSL--PDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSN----- 656
            P        +Q  P  L  P  SG+  +     E  +      +G   + G   N     
Sbjct: 658  PG-------EQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKG 710

Query: 657  PAQSPFSP--HASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQ--------- 705
             A +P +P    +P L  +PG    + +  P G ++  +GP      PG           
Sbjct: 711  DAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKG-DRGDAGPKGADGSPGKDGVRGLTGPI 769

Query: 706  MPPQP---PGSQSESS-SHPA--LSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPH 759
             PP P   PG + ES  S PA        P +RG         +    GP          
Sbjct: 770  GPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRG---------EPGPPGPAGFAGPPGAD 820

Query: 760  PSPGGQMHAGISSFQ-QSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSG----PGP 814
              PG +   G +  +  +   G  GP     GP GN   P A     SA   G    PG 
Sbjct: 821  GQPGAKGEPGDAGAKGDAGPPGPAGP-AGPPGPIGNVGAPGAKGARGSAGPPGATGFPGA 879

Query: 815  GMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMT--PSSPG-MSQQGGP 871
               +         GP  P G  P G+    G +    P         P  PG   ++G P
Sbjct: 880  AGRVGPPGPSGNAGPPGPPG--PAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSP 937

Query: 872  GMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQP-MNNSSS 930
            G   P         +  A          Q  +  FPG+          P  +P     S 
Sbjct: 938  GADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGL--------PGPSGEPGKQGPSG 989

Query: 931  LMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSS 990
                + PP  M P          GLA    PGES            EG P  E    +  
Sbjct: 990  ASGERGPPGPMGPP---------GLAG--PPGES----------GREGAPGAEGSPGRDG 1028

Query: 991  SSTTTGEK 998
            S    G++
Sbjct: 1029 SPGAKGDR 1036



 Score =  108 bits (270), Expect = 6e-23
 Identities = 222/885 (25%), Positives = 276/885 (31%), Gaps = 164/885 (18%)

Query: 73   QHPISNNNSLGGAGGGAPQ--PGPDMEQPQHGGAKDSAAGGQADPPGPP----------- 119
            Q P       G +G   P+  PGP  +    G A      G+  PPGP            
Sbjct: 202  QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGL 261

Query: 120  -----------LLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAA 168
                       L    GD   A PK GEP       PG      Q  P  +PG  G P A
Sbjct: 262  PGMKGHRGFSGLDGAKGDAGPAGPK-GEPGS-----PGENGAPGQMGPRGLPGERGRPGA 315

Query: 169  VPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNS 228
                       A  + GP G  GP     G    PG          A GA G   P    
Sbjct: 316  PGPAGARGNDGATGAAGPPGPTGPA----GPPGFPG----------AVGAKGEAGPQGPR 361

Query: 229  HEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAA 288
                P        G   P    G  G  G  G  G  G  G  GA G         A   
Sbjct: 362  GSEGPQG----VRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGP 417

Query: 289  AAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFA 348
            +   G GG  G  G+S   G   S    G     GP G       +   G A    +R A
Sbjct: 418  SGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVG------VQGPPGPAGEEGKRGA 471

Query: 349  GQNQHPSGATPTLNQLLTSPSPMMRSYGGS--YPEYSSPSAPPPPPSQPQSQAAAAGAAA 406
                 P+G        L  P P  R   GS  +P     + P  P  +  S   A    +
Sbjct: 472  RGEPGPTG--------LPGP-PGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGS 522

Query: 407  GGQQAAAG-MGLGKDMGAQYAAASPAWAAAQQRSHPAMS---PGTPGPTMGRSQGSPMDP 462
             G+    G  GL    G   +  SP          PA     PG PGP   R Q      
Sbjct: 523  PGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAG---- 578

Query: 463  MVMKRPQLYGMGSNPHSQPQQSSPYP------------GGSYGPPGPQRYPIGIQG-RTP 509
             VM  P   G    P    ++  P P             G+ GPPGP   P G +G + P
Sbjct: 579  -VMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAG-PAGERGEQGP 636

Query: 510  GAMAGMQ-YPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYS----QQPQPPH 564
                G Q  P          K     +P   G  G SG   +G++ +      Q P  P 
Sbjct: 637  AGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSG--ARGERGFPGERGVQGPPGPA 694

Query: 565  LPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQER-PSSLPDL 623
             P  A   P               +G    +  P APG      L  +  ER  + LP  
Sbjct: 695  GPRGANGAP-------------GNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGP 741

Query: 624  SGSIDDL-PTGTEAT--------LSSAVSASGSTSSQGDQ-----SNPAQSPFSPHASPH 669
             G   D  P G + +        L+  +   G   + GD+     S PA  P     +P 
Sbjct: 742  KGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPA-GPTGARGAPG 800

Query: 670  LSSIPGGPSPSPVGSPVGSN--------------QSRSGPISPASIPGSQMPPQPPGSQS 715
                PG P P+    P G++              +  +GP  PA   G   PP P G+  
Sbjct: 801  DRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAG---PPGPIGNVG 857

Query: 716  ESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQ 775
               +  A   +  P   GF     R       GP   GPS +  P PG    AG      
Sbjct: 858  APGAKGARGSAGPPGATGFPGAAGR------VGP--PGPSGNAGP-PGPPGPAG------ 902

Query: 776  SNSSGTYGPQMSQYGPQGNYSR--PPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPC 833
                G  GP+  + GP G      PP   G P+     PG      A      QG +   
Sbjct: 903  --KEGGKGPR-GETGPAGRPGEVGPPGPPG-PAGEKGSPGADGPAGAPGTPGPQGIAGQR 958

Query: 834  GAVPL-GRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPG-MGPP 876
            G V L G+    G    P P         S    ++G PG MGPP
Sbjct: 959  GVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPP 1003



 Score =  104 bits (259), Expect = 1e-21
 Identities = 183/684 (26%), Positives = 218/684 (31%), Gaps = 117/684 (17%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-LLSKPGDEDDAPPKMGEP--AGG 140
            GA G     GP  E+ + G A      G   P GPP    KPG E   P  +G P  +G 
Sbjct: 617  GAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPG-EQGVPGDLGAPGPSGA 675

Query: 141  RYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQ 200
            R E    G  G Q PP   P G  G    P  +   G A  A G PG +  P     G Q
Sbjct: 676  RGERGFPGERGVQGPPG--PAGPRGANGAPGNDGAKGDAG-APGAPGSQGAP-----GLQ 727

Query: 201  QSPGMGMMHSASAAAAGAPGSM----DPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGG 256
              PG          AAG PG      D      +G P    +   G + P    G  G  
Sbjct: 728  GMPG-------ERGAAGLPGPKGDRGDAGPKGADGSPGK--DGVRGLTGPIGPPGPAGAP 778

Query: 257  GGGGGSGGGGGGGGAGAGGAGAGAVA------AAAAAAAAAAGGGGGGGYGGSSAGYGVL 310
            G  G SG  G  G  GA GA            A  A    A G  G  G  G +   G  
Sbjct: 779  GDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDA 838

Query: 311  SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGAT--PTLNQLLTSP 368
              P   G     GP G   A  +K A GSA             P GAT  P     +  P
Sbjct: 839  GPPGPAGPAGPPGPIGNVGAPGAKGARGSAG------------PPGATGFPGAAGRVGPP 886

Query: 369  SPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAA 428
             P             S +A PP P  P  +    G    G+   AG         +    
Sbjct: 887  GP-------------SGNAGPPGPPGPAGKEGGKGPR--GETGPAGRP------GEVGPP 925

Query: 429  SPAWAAAQQRSH----PAMSPGTPGPTMGRSQ----GSPMDPMVMKRPQLYGMGSNPHSQ 480
             P   A ++ S     PA +PGTPGP     Q    G P        P L G    P  Q
Sbjct: 926  GPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQ 985

Query: 481  PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYG 540
                +    G  GPPGP   P G+ G  PG       P  + S            P + G
Sbjct: 986  GPSGA---SGERGPPGPMGPP-GLAG-PPGESGREGAPGAEGS------------PGRDG 1028

Query: 541  QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQP--P 598
              G  G           +    P  PP A   P        P     + G    + P  P
Sbjct: 1029 SPGAKG----------DRGETGPAGPPGAPGAPGAPG----PVGPAGKSGDRGETGPAGP 1074

Query: 599  LAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQS-NP 657
              P  P          + P      +G   D         S      G   S G+Q  + 
Sbjct: 1075 AGPVGPVGAR-GPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSG 1133

Query: 658  AQSPFSPHASPHLSSIPGGPS----PSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGS 713
            A  P  P   P  +  PG       P P+G P    + R+G   P   PG   PP PPG 
Sbjct: 1134 ASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPP--GPRGRTGDAGPVGPPGPPGPPGPPGP 1191

Query: 714  QSESSSHPALSQSPMPQERGFMAG 737
             S       L Q   PQE+    G
Sbjct: 1192 PSAGFDFSFLPQP--PQEKAHDGG 1213



 Score = 90.5 bits (223), Expect = 2e-17
 Identities = 183/728 (25%), Positives = 224/728 (30%), Gaps = 147/728 (20%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-------LLSKPGDEDDA--PPKM 134
            G  G    PGPD +    G A      G+  PPGPP       ++  PG +  A  P K 
Sbjct: 539  GLTGSPGSPGPDGKTGPPGPAGQD---GRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKA 595

Query: 135  GE-----PAGGRYEHPGLGALGTQQPP----VAVPGGGGGPAAVPEFNNYYGSAAPASGG 185
            GE     P G        G  G Q PP     A   G  GPA  P F    G A     G
Sbjct: 596  GERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPA-----G 650

Query: 186  PGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSR 245
            P G AG    + G Q  PG            GAPG          G+P  +     G   
Sbjct: 651  PPGEAG----KPGEQGVPG----------DLGAPGPSGA--RGERGFPGER-----GVQG 689

Query: 246  PGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSA 305
            P    G  G  G  G  G  G  G  GA G+              AAG  G  G  G + 
Sbjct: 690  PPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAG 749

Query: 306  GYGVLSSPRQQGGGMMMGPGG-----GGAASLSKAAAGSAAG--GFQRFAGQNQHPSGAT 358
              G   SP + G   + GP G     G      ++     AG  G +   G    P    
Sbjct: 750  PKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPG 809

Query: 359  PTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAG--AAAGGQQAAAGMG 416
            P              + G      +   A PP P+ P       G   A G + A    G
Sbjct: 810  PAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAG 869

Query: 417  LGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSN 476
                 G   AA           + P   PG  G   G+       P    RP   G    
Sbjct: 870  PPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPA--GRPGEVGPPGP 927

Query: 477  PHSQPQQSSPY---PGGSYGPPGPQ-----RYPIGIQG-RTPGAMAGMQYPQQQDSGDAT 527
            P    ++ SP    P G+ G PGPQ     R  +G+ G R      G+  P    SG+  
Sbjct: 928  PGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGP----SGE-- 981

Query: 528  WKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRY------Q 581
                    P + G  G SG           + P  P  PP     P +S +         
Sbjct: 982  --------PGKQGPSGASG----------ERGPPGPMGPPGLAGPPGESGREGAPGAEGS 1023

Query: 582  PQQDMSQEGYGTRSQ-----PPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDL----PT 632
            P +D S    G R +     PP APG P            P      SG   +     P 
Sbjct: 1024 PGRDGSPGAKGDRGETGPAGPPGAPGAPGAPG--------PVGPAGKSGDRGETGPAGPA 1075

Query: 633  GTEATLSSAVSAS--------GSTSSQGDQS-----------NPAQSPFSP-HASPHLSS 672
            G    + +   A         G T  QGD+             P   P SP    P  +S
Sbjct: 1076 GPVGPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGAS 1135

Query: 673  IPGGPS--PSPVGSP----VGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQS 726
             P GP   P   G+P    +       GP  P    G   P  PPG        P     
Sbjct: 1136 GPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGP-------PGPPGP 1188

Query: 727  PMPQERGF 734
            P P   GF
Sbjct: 1189 PGPPSAGF 1196



 Score = 85.5 bits (210), Expect = 5e-16
 Identities = 112/426 (26%), Positives = 135/426 (31%), Gaps = 36/426 (8%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-LLSKPGDEDDAPPKMGEPAGGRY 142
            G  G A  PG D +    G   D+ A G A PPGP      PG   +      + A G  
Sbjct: 809  GPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSA 868

Query: 143  EHPGL----GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAP-ASGGPGGRAGPCFDQH 197
              PG     GA G   PP   P G  GP   P      G   P    GP GR G    + 
Sbjct: 869  GPPGATGFPGAAGRVGPPG--PSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPG----EV 922

Query: 198  GGQQSPGMGMMHSASAA--AAGAPGSMDPL----QNSHEGYPNSQCNH-YPGYSRPGAGG 250
            G    PG      +  A   AGAPG+  P     Q    G P  +    +PG   P    
Sbjct: 923  GPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEP 982

Query: 251  GGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVL 310
            G  G  G  G  G  G  G  G  G    +    A  A  + G  G  G  G     G  
Sbjct: 983  GKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPA 1042

Query: 311  SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSP 370
              P   G     GP G    S  +   G A           + P+G          +   
Sbjct: 1043 GPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQ 1102

Query: 371  MMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM--GLGKD--MGAQYA 426
              R   G +  +S    PP PP  P  Q  +  +   G +   G     GKD   G    
Sbjct: 1103 GDRGIKG-HRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGP 1161

Query: 427  AASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSP 486
               P        + P   PG PGP      G P  P         G   +   QP Q   
Sbjct: 1162 IGPPGPRGRTGDAGPVGPPGPPGP-----PGPPGPPSA-------GFDFSFLPQPPQEKA 1209

Query: 487  YPGGSY 492
            + GG Y
Sbjct: 1210 HDGGRY 1215



 Score = 65.9 bits (159), Expect = 4e-10
 Identities = 167/672 (24%), Positives = 218/672 (32%), Gaps = 122/672 (18%)

Query: 373 RSYGG-SYPEYSSPSAP---PPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAA 428
           +S GG S P    PS P   P PP  P  Q         G+  A+G      MG +    
Sbjct: 170 KSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASG-----PMGPR---G 221

Query: 429 SPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYP 488
            P           A  PG PG      +G P        P   G+      +        
Sbjct: 222 PPGPPGKNGDDGEAGKPGRPG-----ERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGA 276

Query: 489 GGSYGPPGPQRYPIGIQGR--TPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSG 546
            G  GP GP+  P G  G    PG M     P ++    A         P   G +G  G
Sbjct: 277 KGDAGPAGPKGEP-GSPGENGAPGQMGPRGLPGERGRPGA---------PGPAGARGNDG 326

Query: 547 YCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEG-YGTRSQPPLAPGKPN 605
                  P  +    PP  P         ++    PQ     EG  G R +    PG P 
Sbjct: 327 ATGAAGPPGPTGPAGPPGFPGAV-----GAKGEAGPQGPRGSEGPQGVRGE----PGPPG 377

Query: 606 HEDLNLIQQERPSSLPDLSGS--IDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFS 663
                      P+     +G+   D  P    A  +  ++ +         S P Q P  
Sbjct: 378 -----------PAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGP-QGPGG 425

Query: 664 PHASPHLSSIPGGP----------SPSPVG-----SPVGSNQSRS--GPISPASIPGSQM 706
           P      S  PG P           P PVG      P G    R   G   P  +PG   
Sbjct: 426 PPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPG--- 482

Query: 707 PPQPPGSQSESSSHPALSQSPMPQERGF-----MAGTQRNPQMAQYGPQQTGPSMSPHPS 761
              PPG +              P  RGF     +AG  + P   +  P   GP  SP  +
Sbjct: 483 ---PPGERGG------------PGSRGFPGADGVAG-PKGPAGERGSPGPAGPKGSPGEA 526

Query: 762 PGGQMHAGISSFQ-QSNSSGTYGP--QMSQYGPQGNYSRPPAYSGVPSASYSG-----PG 813
            G    AG+   +  + S G+ GP  +    GP G   R P   G P A         PG
Sbjct: 527 -GRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGR-PGPPGPPGARGQAGVMGFPG 584

Query: 814 PGMGISANNQMHGQGPSQPCGAV-PLGRMPSAGMQNRPFP----GNMSSMTPS-SPGMSQ 867
           P        +   +G   P GAV P G+   AG Q  P P    G      P+ SPG   
Sbjct: 585 PKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGF-- 642

Query: 868 QGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNN 927
           QG PG   P     +  ++     + A   S    +  FPG  + G+     P + P   
Sbjct: 643 QGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPG--ERGVQGPPGP-AGPRGA 699

Query: 928 SSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGE---SKLPLPLKADGKEEGTPQPES 984
           + +  N  A   + AP    S  A  GL  M  PGE   + LP P K D  + G    + 
Sbjct: 700 NGAPGNDGAKGDAGAPGAPGSQGAP-GLQGM--PGERGAAGLPGP-KGDRGDAGPKGADG 755

Query: 985 KSKKSSSSTTTG 996
              K      TG
Sbjct: 756 SPGKDGVRGLTG 767



 Score = 49.3 bits (116), Expect = 4e-05
 Identities = 137/571 (23%), Positives = 179/571 (31%), Gaps = 115/571 (20%)

Query: 482 QQSSPYPGGSYGPPGP----------------QRYPIGIQGRTPGAMAGMQYPQQQDSGD 525
           Q   P P G  GPPGP                ++   GI    PG M             
Sbjct: 137 QPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGIS--VPGPMGPSGPRGLPGPPG 194

Query: 526 ATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQD 585
           A   + F   P + G+ G SG             P+ P  PP       ++ +  +P + 
Sbjct: 195 APGPQGFQGPPGEPGEPGASG----------PMGPRGPPGPPGKNGDDGEAGKPGRPGER 244

Query: 586 MSQEGYGTRSQPPLA--PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSS--- 640
                 G R  P  A  PG   H           S L    G  D  P G +    S   
Sbjct: 245 GPPGPQGARGLPGTAGLPGMKGHRGF--------SGLDGAKG--DAGPAGPKGEPGSPGE 294

Query: 641 --AVSASGSTSSQGDQSNP-AQSPFSPHASPHLSSIPGGPSPS-PVGSP-----VGSN-- 689
             A    G     G++  P A  P     +   +   G P P+ P G P     VG+   
Sbjct: 295 NGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGE 354

Query: 690 ---QSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGF--MAGTQRNP-Q 743
              Q   G   P  + G   PP P G+   + +  A  Q       G   +AG    P  
Sbjct: 355 AGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGA 414

Query: 744 MAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQ--YGPQGNYSR---- 797
               GPQ  GP   P P           S   + + G  GP   Q   GP G   +    
Sbjct: 415 RGPSGPQ--GPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGAR 472

Query: 798 -PPAYSGVPSASYSGPGPG-MGISANNQMHG-QGPSQPCGAV-PLGRMPSAGMQNRP--- 850
             P  +G+P       GPG  G    + + G +GP+   G+  P G   S G   RP   
Sbjct: 473 GEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEA 532

Query: 851 -FPGNMS-SMTPSSPGMSQQGGP--------GMGPPMPTVNRKAQEAAAAVM------QA 894
             PG    + +P SPG   + GP          GPP P   R      A VM       A
Sbjct: 533 GLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGAR----GQAGVMGFPGPKGA 588

Query: 895 AANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVG 954
           A    ++ +   PG           P +            Q PP    PA         G
Sbjct: 589 AGEPGKAGERGVPG----------PPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAG 638

Query: 955 LADMMSPGESKLPLPLKADGK-----EEGTP 980
                SPG   LP P    G+     E+G P
Sbjct: 639 -----SPGFQGLPGPAGPPGEAGKPGEQGVP 664



 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 60/203 (29%), Positives = 66/203 (32%), Gaps = 35/203 (17%)

Query: 82   LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGR 141
            L G  G   + GP     + G        G A PPG          + AP   G P  GR
Sbjct: 975  LPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPG------ESGREGAPGAEGSP--GR 1026

Query: 142  YEHPGL----GALGTQQPPVA--VPGGGG--GPAAVPEFNNYYGSAAPASG-GPGGRAGP 192
               PG     G  G   PP A   PG  G  GPA         G A PA   GP G  GP
Sbjct: 1027 DGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGP 1086

Query: 193  CFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGG 252
                  G Q P      +      G  G        H G+   Q     G   P    G 
Sbjct: 1087 -----AGPQGPRGDKGETGEQGDRGIKG--------HRGFSGLQ-----GPPGPPGSPGE 1128

Query: 253  GGGGGGGGGSGGGGGGGGAGAGG 275
             G  G  G +G  G  G AGA G
Sbjct: 1129 QGPSGASGPAGPRGPPGSAGAPG 1151



 Score = 37.7 bits (86), Expect = 0.12
 Identities = 67/251 (26%), Positives = 80/251 (31%), Gaps = 50/251 (19%)

Query: 674 PGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG 733
           P GP   P G P      R G      +PG   PP PPG        P L  +  PQ   
Sbjct: 119 PRGPR-GPAGPP-----GRDGIPGQPGLPGPPGPPGPPGP-------PGLGGNFAPQ--- 162

Query: 734 FMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQ----QSNSSGTYGPQMSQY 789
              G           P   GPS  P   PG     G   FQ    +    G  GP M   
Sbjct: 163 LSYGYDEKSTGGISVPGPMGPS-GPRGLPGPPGAPGPQGFQGPPGEPGEPGASGP-MGPR 220

Query: 790 GPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPL-GRMPSAGMQ- 847
           GP G    PP  +G    +     PG           +GP  P GA  L G     GM+ 
Sbjct: 221 GPPG----PPGKNGDDGEAGKPGRPG----------ERGPPGPQGARGLPGTAGLPGMKG 266

Query: 848 NRPFPGNMSSM----------TPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAAN 897
           +R F G   +            P SPG  + G PG   P      + +  A     A  N
Sbjct: 267 HRGFSGLDGAKGDAGPAGPKGEPGSPG--ENGAPGQMGPRGLPGERGRPGAPGPAGARGN 324

Query: 898 SAQSRQGSFPG 908
              +     PG
Sbjct: 325 DGATGAAGPPG 335



 Score = 35.4 bits (80), Expect = 0.62
 Identities = 75/331 (22%), Positives = 97/331 (29%), Gaps = 36/331 (10%)

Query: 1123 PSPANSGSLQGPQTPQ-STGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDP 1181
            P P       GP+    S G + +  + G + PP PA  P  +      G +        
Sbjct: 739  PGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGA 798

Query: 1182 FSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQG 1241
              D  +          P  P   G + P      P    +    G +   G   P    G
Sbjct: 799  PGDRGE----------PGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAG 848

Query: 1242 QMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYG 1301
              P   + ++      GA  + G      FP  A    R  P G    G   P G P   
Sbjct: 849  --PPGPIGNVGAPGAKGARGSAGPPGATGFPGAAG---RVGPPGPS--GNAGPPGPPGPA 901

Query: 1302 GHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYG--------GSY 1353
            G + G  P+         G  GPP             +          G        G  
Sbjct: 902  GKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVV 961

Query: 1354 SGPDRRPIQG--QYPYPYSRERMQGPGQIQTHGIPPQMMG-----GPLQSSSSEG-PQQN 1405
              P +R  +G    P P      QGP        PP  MG     GP   S  EG P   
Sbjct: 962  GLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAE 1021

Query: 1406 MWAARNDMPYPYQNR--QGPGGPTQAPPYPG 1434
                R+  P    +R   GP GP  AP  PG
Sbjct: 1022 GSPGRDGSPGAKGDRGETGPAGPPGAPGAPG 1052



 Score = 35.0 bits (79), Expect = 0.81
 Identities = 88/379 (23%), Positives = 121/379 (31%), Gaps = 68/379 (17%)

Query: 1099 ERGEEPPPEVFSTGDTKKQPKLQ-PPSPANSGSLQGPQTPQST----------------G 1141
            ERG   PP          +   Q PP PA     +G Q P  +                G
Sbjct: 597  ERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAG 656

Query: 1142 SNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDP--FSDVSDSSFPKRNSMTPN 1199
                  VPGDL  P P+     +  P + G         P   +    +   K ++  P 
Sbjct: 657  KPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPG 716

Query: 1200 APYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYN----QS 1255
            AP  QG   P + G MP E       G +   G + P    G      ++ +        
Sbjct: 717  APGSQG--APGLQG-MPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPG 773

Query: 1256 PSGAMSNLGMGQRQQFPYGAS--YDRRHEPYGQQYPGQGPPSG--QPPYGGHQPGLYPQQ 1311
            P+GA  + G    +  P G +     R  P  +  PG   P+G   PP    QPG   + 
Sbjct: 774  PAGAPGDKG----ESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEP 829

Query: 1312 PNYKRHMD-------GMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQ 1364
             +     D       G  GPP     G + N+     +        GS   P      G 
Sbjct: 830  GDAGAKGDAGPPGPAGPAGPP-----GPIGNVGAPGAKGAR-----GSAGPP------GA 873

Query: 1365 YPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARN-------DMPYPY 1417
              +P +  R+  PG     G  P    GP      +GP+     A           P P 
Sbjct: 874  TGFPGAAGRVGPPGPSGNAG--PPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPA 931

Query: 1418 QNRQGPG--GPTQAPPYPG 1434
              +  PG  GP  AP  PG
Sbjct: 932  GEKGSPGADGPAGAPGTPG 950



 Score = 33.5 bits (75), Expect = 2.4
 Identities = 33/107 (30%), Positives = 42/107 (39%), Gaps = 11/107 (10%)

Query: 70   QQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-LLSKPGDE- 127
            +Q    I  +    G  G    PG   EQ   G      A G A P GPP     PG + 
Sbjct: 1101 EQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSG------ASGPAGPRGPPGSAGAPGKDG 1154

Query: 128  -DDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFN 173
             +  P  +G P G R      G +G   PP   PG  G P+A  +F+
Sbjct: 1155 LNGLPGPIG-PPGPRGRTGDAGPVGPPGPP-GPPGPPGPPSAGFDFS 1199


>gi|48762934 alpha 2 type I collagen [Homo sapiens]
          Length = 1366

 Score =  113 bits (282), Expect = 2e-24
 Identities = 208/827 (25%), Positives = 269/827 (32%), Gaps = 128/827 (15%)

Query: 77   SNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-LLSKPGDE-----DDA 130
            S N    G+ G    PGP  E+ + G    +   G A PPGPP L   PG       D  
Sbjct: 357  SGNKGEPGSAGPQGPPGPSGEEGKRG---PNGEAGSAGPPGPPGLRGSPGSRGLPGADGR 413

Query: 131  PPKMGEPA----------------GGRYEHPGL-GALGTQQPPVAV-PGGGGGPAAVPEF 172
               MG P                  GR   PGL G  G    P  + P G  GP  +P  
Sbjct: 414  AGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGI 473

Query: 173  NNYYGSAAPAS--GGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHE 230
            +   G   PA   G PG    P      G         H+  A A GAPG      N  +
Sbjct: 474  DGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDG--NNGAQ 531

Query: 231  GYPNSQ----------------CNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAG 274
            G P  Q                    PG S P    G  G  G  G  G  G  G  G  
Sbjct: 532  GPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGER 591

Query: 275  GAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLS 333
            G    + AA       + G  G  G  G+    GV+ +    G     G PG  GAA + 
Sbjct: 592  GPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAAGIP 651

Query: 334  KAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPP-- 391
                     G +   G N    GA       + +P P   +        + P+ P  P  
Sbjct: 652  GGKGEKGEPGLRGEIG-NPGRDGARGAPG-AVGAPGPAGATGDRGEAGAAGPAGPAGPRG 709

Query: 392  ---------PSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPA 442
                     P+ P   A  AGAA  GQ  A G    K    +     P        + PA
Sbjct: 710  SPGERGEVGPAGPNGFAGPAGAA--GQPGAKGERGAKGPKGENGVVGPTGPVG--AAGPA 765

Query: 443  MSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPI 502
               G PGP   R  G P            GM   P +  +   P P G  GPPGP     
Sbjct: 766  GPNGPPGPAGSRGDGGPP-----------GMTGFPGAAGRTGPPGPSGISGPPGPP---- 810

Query: 503  GIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQY-GQQGVSGYCQQGQQPYYSQQPQ 561
                  P    G++ P+          E   + PP + G++G SG       P  +  PQ
Sbjct: 811  -----GPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEAGTAGPP-GTPGPQ 864

Query: 562  PPHLPPQAQYLPSQSQQRYQP--QQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSS 619
                 P    LP    +R  P     + + G    + PP A G P               
Sbjct: 865  GLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPPGARGPPG-----------AVG 913

Query: 620  LPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSP 679
             P ++G+        EA         G     G   +  +  +  +  P      G P P
Sbjct: 914  SPGVNGA------PGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGP--VGAAGAPGP 965

Query: 680  -SPVGSPVGSNQSR-----SGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG 733
              PVG P G + +R     SGP+ PA   G + P  P G + +           +P  +G
Sbjct: 966  HGPVG-PAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKG 1024

Query: 734  FMAGTQRNPQMA-----QYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQ 788
               G Q  P +A     Q  P   GP+  P    G    AG     ++   GT GP   +
Sbjct: 1025 H-NGLQGLPGIAGHHGDQGAPGSVGPA-GPRGPAGPSGPAGKDG--RTGHPGTVGPAGIR 1080

Query: 789  YGPQGNY--SRPPAYSGVPS-ASYSGPGPGMGISANNQMHGQGPSQP 832
             GPQG+   + PP   G P     SG G   G   +     Q  S P
Sbjct: 1081 -GPQGHQGPAGPPGPPGPPGPPGVSGGGYDFGYDGDFYRADQPRSAP 1126



 Score = 99.8 bits (247), Expect = 3e-20
 Identities = 208/905 (22%), Positives = 273/905 (30%), Gaps = 172/905 (19%)

Query: 87  GGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPG 146
           G A   GP  E+   G        G   PPGPP    PG     PP +G     +Y+  G
Sbjct: 33  GPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPP--GPPG-----PPGLGGNFAAQYDGKG 85

Query: 147 LGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA----PASGGPGGRAGPCFDQHGGQQS 202
           +G LG     +  P G  G A  P    + G A     P   GP G  GP      G   
Sbjct: 86  VG-LGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGP-----AGPPG 139

Query: 203 PGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGS 262
                 H       G  G + P      G+P +     PG+       G  G  G  G  
Sbjct: 140 KAGEDGHPGKPGRPGERGVVGP--QGARGFPGTP--GLPGFKGIRGHNGLDGLKGQPGAP 195

Query: 263 GGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMM 322
           G  G  G  G  G      A          G  G  G  GS    G +      G     
Sbjct: 196 GVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSA--- 252

Query: 323 GPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEY 382
           GP G   A   K   G+           N  P+G      ++               P  
Sbjct: 253 GPPGFPGAPGPKGEIGAVG---------NAGPAGPAGPRGEV-------------GLPGL 290

Query: 383 SSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM----------GLGKDMGAQYAAASPAW 432
           S P  PP  P       A   A   G   A G+          G     GA+     P  
Sbjct: 291 SGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGP 350

Query: 433 AAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPY-PGGS 491
           A ++  S     PG+ GP     QG P                 P  +  +  P    GS
Sbjct: 351 AGSKGESGNKGEPGSAGP-----QGPP----------------GPSGEEGKRGPNGEAGS 389

Query: 492 YGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQG 551
            GPPGP     G++G +PG+                       +P   G+ GV G     
Sbjct: 390 AGPPGPP----GLRG-SPGSRG---------------------LPGADGRAGVMG----- 418

Query: 552 QQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNL 611
                         PP ++     +  R  P  D  + G      P   PG P   ++  
Sbjct: 419 --------------PPGSRGASGPAGVR-GPNGDAGRPGEPGLMGPRGLPGSPG--NIGP 461

Query: 612 IQQERPSSLPDLSGSIDDL-PTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHL 670
             +E P  LP + G    + P G      +     G    +G   +P ++    HA   L
Sbjct: 462 AGKEGPVGLPGIDGRPGPIGPAGARGEPGNI----GFPGPKGPTGDPGKNGDKGHAG--L 515

Query: 671 SSIPGGPSPSPVGSPVGSNQSRSGPISPASI---PGSQMPPQPPGSQSESSSHPALSQSP 727
           +   G P P         N    GP  P  +    G Q PP PPG Q          +  
Sbjct: 516 AGARGAPGPD-------GNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVG 568

Query: 728 MPQERGFMAGTQRNPQMAQYG-PQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQM 786
            P ERG            ++G P   GP     P PG    AG +      S G  GP  
Sbjct: 569 KPGERGL---------HGEFGLPGPAGPRGERGP-PGESGAAGPTG--PIGSRGPSGPP- 615

Query: 787 SQYGPQGNYSRPPAYSGVPSASYSGPG--PGMGISANNQMHGQGPSQPCGAVPLGRMPSA 844
              GP GN   P     V +A  SGP   PG    A     G+G     G    G + + 
Sbjct: 616 ---GPDGNKGEPGVVGAVGTAGPSGPSGLPGER-GAAGIPGGKGEKGEPGL--RGEIGNP 669

Query: 845 GMQN-RPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQ 903
           G    R  PG + +  P+     +      GP  P   R +      V  A  N      
Sbjct: 670 GRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPA 729

Query: 904 GSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVG-LADMMSPG 962
           G+       G   +  P        + ++    P  +  PA  N      G   D   PG
Sbjct: 730 GAAGQPGAKGERGAKGP-----KGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPG 784

Query: 963 ESKLP 967
            +  P
Sbjct: 785 MTGFP 789



 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 82/294 (27%), Positives = 101/294 (34%), Gaps = 62/294 (21%)

Query: 73   QHPISNNNSLGGAG--GGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDA 130
            Q P+     +G  G  G A + GP            S   G A PPG P    P     A
Sbjct: 825  QGPVGRTGEVGAVGPPGFAGEKGP------------SGEAGTAGPPGTP---GPQGLLGA 869

Query: 131  PPKMGEPAGGRYEH--PGLGALGTQQPPVAV---PGGGGGPAAV--PEFNNYYGSAA--- 180
            P  +G P G R E   PG+     +  P+ +   PG  G P AV  P  N   G A    
Sbjct: 870  PGILGLP-GSRGERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDG 928

Query: 181  -PASGGPGGRAGPCFDQHGGQQS-PGMGMMHSASAAAAGAPGSMDPLQ------NSHEGY 232
             P + GP GR G     H G++  PG    +     AAGAPG   P+       N  E  
Sbjct: 929  NPGNDGPPGRDGQ--PGHKGERGYPG----NIGPVGAAGAPGPHGPVGPAGKHGNRGETG 982

Query: 233  PNSQCNHY--------------------PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAG 272
            P+                          PG   P    G  G  G  G  G  G  G  G
Sbjct: 983  PSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQG 1042

Query: 273  AGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGG 326
            A G+   A     A  +  AG  G  G+ G+    G+      QG     GP G
Sbjct: 1043 APGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGIRGPQGHQGPAGPPGPPG 1096


>gi|5453638 AT rich interactive domain 3B [Homo sapiens]
          Length = 560

 Score =  106 bits (264), Expect = 3e-22
 Identities = 93/333 (27%), Positives = 155/333 (46%), Gaps = 41/333 (12%)

Query: 831  QPCGAVPLGRM----PSAGMQNRPFPGNMSSMTPSSPG-MSQQGGPGMGPPMPTVNRKAQ 885
            +P G+ PLG +    P+A +      GNM+S      G +  + G          + +  
Sbjct: 59   RPSGSTPLGPLARVPPTAAVAQVFERGNMNSEPEEEDGGLEDEDG----------DDEVA 108

Query: 886  EAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAM 945
            E A    QAA+     ++           +A   P   PM+N   L     PP+      
Sbjct: 109  EVAEKETQAASKYFHVQK-----------VARQDPRVAPMSNL--LPAPGLPPHGQQAKE 155

Query: 946  VNSSAASVGLADMMSPGESKLPLP--LKADGKEEGTPQPESKSKKSSSSTTTGEKITKVY 1003
             ++  AS     + + G+    L   LK +G    +   +    +  S         K+Y
Sbjct: 156  DHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREIS-----RDFAKLY 210

Query: 1004 ELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKK 1063
            EL  +PERK ++D    FM++RG+P++ +P + K+ LDL+ LY  V E GGL ++   K 
Sbjct: 211  ELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKI 270

Query: 1064 WRELATNLNVGTS-SSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQP 1122
            WRE+   LN+ TS +SAA +L+ QY++YL+A+EC+ ++    P E+ +  D  ++   + 
Sbjct: 271  WREITKGLNLPTSITSAAFTLRTQYMKYLYAYECE-KKALSSPAELQAAIDGNRR---EG 326

Query: 1123 PSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPP 1155
              P+ S SL G  +P +  + + A  P  L PP
Sbjct: 327  RRPSYSSSLFG-YSPAAATAAAAAGAPALLSPP 358


>gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein [Homo
            sapiens]
          Length = 593

 Score =  104 bits (260), Expect = 8e-22
 Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 14/197 (7%)

Query: 954  GLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKL 1013
            G+  ++   E   P P    G     PQ +          T  E+  ++YEL  +P+RK 
Sbjct: 187  GVPRVLGGQERPGPGPAHPGGAAHVAPQLQPPDH---GDWTYEEQFKQLYELDGDPKRKE 243

Query: 1014 WVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNV 1073
            ++D   +FM++RG+PV+ +P + K+ LDLF LYV V E GGL +V   K WRE+   LN+
Sbjct: 244  FLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNL 303

Query: 1074 GTS-SSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQP--------KLQPPS 1124
             TS +SAA +L+ QY++YL+ +EC+ +RG   P E+ +  D+ ++          L   S
Sbjct: 304  PTSITSAAFTLRTQYMKYLYPYECE-KRGLSNPNELQAAIDSNRREGRRQSFGGSLFAYS 362

Query: 1125 PANS-GSLQGPQTPQST 1140
            P  + G L  P+ P S+
Sbjct: 363  PGGAHGMLSSPKLPVSS 379



 Score = 40.0 bits (92), Expect = 0.025
 Identities = 18/51 (35%), Positives = 23/51 (45%)

Query: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAA 291
           P    P +    GGGGGGG  S  GG GG  G  G  AG    +  + + +
Sbjct: 538 PPAPTPTSAPNKGGGGGGGSSSNAGGRGGNTGTSGGQAGPAGLSTPSTSTS 588



 Score = 37.0 bits (84), Expect = 0.21
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 8/93 (8%)

Query: 1646 GDPSQKALDHNAARKDDSQSLADDSG-----KEEEDAECIDDDEEDEEDEEEDSEKTESD 1700
            G P           ++  + +A D       +EEE  E + +DEE+EE++ ED E+ E +
Sbjct: 97   GTPGSPGRGREGPGEEHFEDMASDEDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEEDE 156

Query: 1701 E---KSSIALTAPDAAADPKEKPKQASKFDKLP 1730
            E       A     A    K +P QA + D +P
Sbjct: 157  EGLGPPGPASLGTTALFPRKAQPPQAFRGDGVP 189



 Score = 33.9 bits (76), Expect = 1.8
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 1/98 (1%)

Query: 59  QQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSA-AGGQADPPG 117
           Q+QQ+ +Q+ + +QQ P     +  G    AP    + E  +   A+ +A A  +A   G
Sbjct: 12  QRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMAALAAMRAAAAG 71

Query: 118 PPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQP 155
               + PG  +D PP   E    R   PG    G + P
Sbjct: 72  LGHPASPGGSEDGPPGSEEEDAAREGTPGSPGRGREGP 109


>gi|57864582 hornerin [Homo sapiens]
          Length = 2850

 Score =  102 bits (255), Expect = 3e-21
 Identities = 222/974 (22%), Positives = 327/974 (33%), Gaps = 121/974 (12%)

Query: 73   QHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPP 132
            QH  S+  S G +  G+   G      QHG     ++ G+          +      +  
Sbjct: 233  QHKSSSGQSSGYSQHGSGS-GHSSGYGQHGSRSGQSSRGE----------RHRSSSGSSS 281

Query: 133  KMGEPAGGRYEHPGLG--ALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGG---PG 187
              G+   G  +  G G    G++Q P  V  G G   +     +  GS+   S G    G
Sbjct: 282  SYGQHGSGSRQSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHGSGSSYSYSRGHYESG 341

Query: 188  GRAGPCFDQH-------GGQQSPGMGMMHSAS----------AAAAGAPGSMDPLQNSHE 230
                  F QH        G    G G  HS+S          A+++G  GS    Q+S  
Sbjct: 342  SGQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGSTSGQASSSGQHGSSSR-QSSSY 400

Query: 231  GYPNSQCNHYPGYSRPGAGGGGGGGGGG-GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAA 289
            G   S   H  G  +  +G G   G G  G GSG     G  G G         ++++  
Sbjct: 401  GQHESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSSGQHGTG------FGRSSSSGP 454

Query: 290  AAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAA-----GSAAGGF 344
              +G G   G+G   +     S   Q G G     G G   S S  ++     GS+AG  
Sbjct: 455  YVSGSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAGSS 514

Query: 345  QRFAGQNQHPSGATPTLNQLL------TSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ 398
              +    QH SG+  +L           SPSP      G +   S  S+   P      +
Sbjct: 515  SSY---GQHGSGSRQSLGHSRHGSGSGQSPSPSR----GRHESGSRQSSSYGPHGYGSGR 567

Query: 399  AAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGS 458
            +++ G    G   ++G+G  +    Q    S  +      S  + + G  G T G+S   
Sbjct: 568  SSSRGPYESGSGHSSGLGHQESRSGQ----SSGYGQHGSSSGHSSTHGQHGSTSGQSSSC 623

Query: 459  PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYP 518
                    +   +G   +  SQ  +      GS   P   R+         G+  G    
Sbjct: 624  GQHGATSGQSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRH---------GSDFGHSSS 674

Query: 519  QQQDSGDATWKETFWLMPPQYGQQGVSGY-CQQGQQPYYSQQPQPPHLPPQAQYLPSQSQ 577
              Q    + W  +        GQ    G+    GQ   YSQ           +   S+S 
Sbjct: 675  YGQHGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSG 734

Query: 578  QRYQPQQDMSQEG-------YGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDL 630
            Q  + +Q  S  G       +G+ S      G+      +   + R  S    S S    
Sbjct: 735  QSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQH 794

Query: 631  PTGTEATLSSA--VSASGSTSSQGDQSNPAQSPFSPH--ASPHLSSIPGGPSPSPVGSPV 686
             +GT  + S     S SG  S  G   + +   +S H  AS H SS     S S   S  
Sbjct: 795  GSGTSCSSSCGHYESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGSTSGQSSSS 854

Query: 687  GSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPA---------LSQSPMPQERGFMAG 737
            G + S SG  S                Q ES+SH A           QSP   +RG  +G
Sbjct: 855  GQHDSSSGQSSSY-------------GQHESASHHASGRGRHGSGSGQSPGHGQRG--SG 899

Query: 738  TQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSR 797
            + ++P   ++G      S S     G    +G      S  S  Y    S  G   +Y +
Sbjct: 900  SGQSPSYGRHGSGSGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQ 959

Query: 798  PPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSS 857
              + SG  S S    G   G S++   HG G  Q  G    G    +G    P P     
Sbjct: 960  HGSRSGQSSRS-EQHGSSSGSSSSYGQHGSGSRQSLGHGQHG----SGSGQSPSPSR--G 1012

Query: 858  MTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMAS 917
               S  G S   GP       + +R   E+ +    +     +SR G   G  Q G  +S
Sbjct: 1013 RHGSGSGQSSSYGPYRSGSGWSSSRGPYESGSG-HSSGLGHRESRSGQSSGYGQHG--SS 1069

Query: 918  SSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEE 977
            S   S    + S+   + +     A +  +SS    G     S G  +        G+  
Sbjct: 1070 SGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQG---SGSGQSP 1126

Query: 978  GTPQPESKSKKSSS 991
            G  Q  S S++S S
Sbjct: 1127 GHGQRGSGSRQSPS 1140



 Score =  102 bits (254), Expect = 4e-21
 Identities = 303/1398 (21%), Positives = 477/1398 (34%), Gaps = 185/1398 (13%)

Query: 74   HPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPK 133
            H  S+ +S G    G+   G      QHG     ++ G+          + G    +   
Sbjct: 468  HESSSEHSSGYTQHGSGS-GHSSGHGQHGSRSGQSSRGE----------RQGSSAGSSSS 516

Query: 134  MGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNY----YGSAAPASGGP--- 186
             G+   G  +  G    G+       P  G   +   + ++Y    YGS   +S GP   
Sbjct: 517  YGQHGSGSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQSSSYGPHGYGSGRSSSRGPYES 576

Query: 187  --GGRAGPCFDQHGGQQSPGMGMMHSAS---------------AAAAGAPGSMDPLQNSH 229
              G  +G    +    QS G G   S+S               +++ G  G+     +SH
Sbjct: 577  GSGHSSGLGHQESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGATSGQSSSH 636

Query: 230  EGYPNSQCNHYPGYSRPGAGGG-----GGGGGGGGGGSGGGGGGGGAGAGGAGA--GAVA 282
             G   S  +    Y + G+G G     G  G   G  S  G  G G+G   +    G+V+
Sbjct: 637  -GQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWSSSNGPHGSVS 695

Query: 283  AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQG--GGMMMGPGGGGAASLSKAAAGSA 340
              ++     +G G   GY    +G    S  R+ G   G        G++S   ++ G  
Sbjct: 696  GQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYGQH 755

Query: 341  AGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAA 400
              G  + +G  +  SG+  + +++    S    S  G +   +S S      S      +
Sbjct: 756  GSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCS------SSCGHYES 809

Query: 401  AAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPM 460
             +G A+G  Q  +G G G    +Q+ +AS  ++          S G  G T G+S  S  
Sbjct: 810  GSGQASGFGQHESGSGQGY---SQHGSASGHFS----------SQGRHGSTSGQSSSSGQ 856

Query: 461  DPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTP-----GAMAGM 515
                  +   YG   +          +  GS   PG  +   G  G++P     G+ +G 
Sbjct: 857  HDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSG-SGQSPSYGRHGSGSGR 915

Query: 516  QYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQ 575
                 +  G  + + + +      GQ   SGY Q G    +S   +  H     Q   S+
Sbjct: 916  SSSSGR-HGSGSGQSSGFGHKSSSGQS--SGYTQHGSGSGHSSSYE-QHGSRSGQ--SSR 969

Query: 576  SQQRYQPQQDMSQEG-YGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGT 634
            S+Q        S  G +G+ S+  L  G+         Q   PS     SGS      G 
Sbjct: 970  SEQHGSSSGSSSSYGQHGSGSRQSLGHGQ---HGSGSGQSPSPSRGRHGSGS------GQ 1020

Query: 635  EATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSG 694
             ++     S SG +SS+G    P +S      S H S +    S S   S  G + S SG
Sbjct: 1021 SSSYGPYRSGSGWSSSRG----PYES-----GSGHSSGLGHRESRSGQSSGYGQHGSSSG 1071

Query: 695  PISPASIPGSQMPP-----QPPGSQSESSSH----PALSQSPMPQERGFMAGTQRNPQMA 745
              S     GS         Q   S  +SSSH       SQS     +G  +G+ ++P   
Sbjct: 1072 HSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQG--SGSGQSPGHG 1129

Query: 746  QYGP-QQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGV 804
            Q G   +  PS   H S  G+  +          S  +G   S  G   +YS+  + SG 
Sbjct: 1130 QRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSG- 1188

Query: 805  PSASYSGPGPGMGISANNQMHG--QGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 862
             S+ Y   G   G S+  + HG   G S   G    G   S+G       G   S +  S
Sbjct: 1189 HSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSG------HGRQGSGSGHS 1242

Query: 863  PGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQG--SFPGMNQSGLMASSSP 920
            P   + G  G+G      +   Q  + +   ++    +SR G  S  G ++SG    SS 
Sbjct: 1243 PSRGRHGS-GLGHS----SSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESG-SGHSSA 1296

Query: 921  YSQPMNNSSSLMNT-QAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGT 979
            YSQ  + S    +  Q    S   +  +   +S G +       S             G+
Sbjct: 1297 YSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGS 1356

Query: 980  PQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKP 1039
             Q  S+ +  S S  +          G       W     +     GS        G   
Sbjct: 1357 GQSPSRGRHGSGSGHSS-------SYGQHGSGSGW----SSSSGRHGSGSGQSSGFGHHE 1405

Query: 1040 LDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIE 1099
               ++   C +   G    +  ++    +   + G    ++S     Y Q+       + 
Sbjct: 1406 SSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLG 1465

Query: 1100 R-------GEEPPPEVFSTGDTKKQPKLQPPSPANSG--SLQGPQTPQSTGSNSMAEVPG 1150
                    G+ P P     G    Q     P  + SG  S +GP    S+ S+ +    G
Sbjct: 1466 HGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGL----G 1521

Query: 1151 DLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQ---GMS 1207
              +  +  S+ +GQ      G SST   H   S  S S      S   ++ + Q   G S
Sbjct: 1522 HRESRSGQSSGYGQ-HGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSS 1580

Query: 1208 MPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQ 1267
                 GR      + P  G R       P  + G+  + S      +S S      G+G+
Sbjct: 1581 QSSGYGRQGSGSGQSPGHGQRGSGSRQSP--SYGRHGSGS-----GRSSSSGQHGSGLGE 1633

Query: 1268 RQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAK 1327
               F +  S   +   Y Q   G G  SG   +G        Q    +RH        + 
Sbjct: 1634 SSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRS----GQSSRGERH-------GSS 1682

Query: 1328 RHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPP 1387
                  Y    S  +Q   + +G   SG  + P +G++          G G   +HG   
Sbjct: 1683 SRSSSRYGQHGSGSRQS--SGHGRQGSGSGQSPSRGRHG--------SGLGHSSSHG--- 1729

Query: 1388 QMMGGPLQSSSSEGPQQN 1405
               G     SSS GP ++
Sbjct: 1730 -QHGSGSGRSSSRGPYES 1746



 Score = 94.7 bits (234), Expect = 9e-19
 Identities = 184/815 (22%), Positives = 283/815 (34%), Gaps = 99/815 (12%)

Query: 163  GGGPAAVPEFNNYYGSAAPASG----GPGGRAGPCFDQHGGQQSPGM-GMMHSASAAAAG 217
            G G      F ++  S+  +SG    G G      ++QHG +      G  H +S+ ++ 
Sbjct: 1392 GSGSGQSSGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSGSSS 1451

Query: 218  APGSMDPLQNSHEGYPNSQCNHYPGYS-RPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGA 276
            + G       S +   + Q     G S  P  G  G G G     S  G G G + + G 
Sbjct: 1452 SYGQHG--SGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGP 1509

Query: 277  GAGAVAAAAAAAAAAAGGGGGGGYG--GSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSK 334
                 + ++      +  G   GYG  GSS+G+           G     G  GA+S   
Sbjct: 1510 YESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQS 1569

Query: 335  AAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQ 394
            ++ G    G  + +G  +  SG+         SP    R  G               PS 
Sbjct: 1570 SSHGQHGSGSSQSSGYGRQGSGSG-------QSPGHGQRGSGSR-----------QSPSY 1611

Query: 395  PQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQR----SHPAMSPGTPGP 450
             +  + +  +++ GQ    G GLG+  G  +  +S   +++  +    S  +   G  G 
Sbjct: 1612 GRHGSGSGRSSSSGQH---GSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGS 1668

Query: 451  TMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGI------ 504
              G+S          +    YG   +   Q         GS   P   R+  G+      
Sbjct: 1669 RSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSH 1728

Query: 505  -QGRTPGAMAGMQYPQQQDSGDAT---WKETFWLMPPQYGQQGVSG--YCQQGQQPYYSQ 558
             Q  +    +  + P +  SG ++     E+       Y Q G     +C QGQ    S 
Sbjct: 1729 GQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSG 1788

Query: 559  QPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPS 618
            Q              +  Q+     Q  S   +G+ S    + G+          + R  
Sbjct: 1789 QSS------------TFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHG 1836

Query: 619  SLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQG----DQSNPAQSPFSPH--ASPHLSS 672
            S    S S     +G+  + SS    SGS  S G    + S+   S ++ H   S H SS
Sbjct: 1837 SGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSS 1896

Query: 673  IPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQER 732
                 S S   S    + S SG  S     GS         Q  S S     QSP P   
Sbjct: 1897 YEQHGSRSGQSSRGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGS----GQSPSPSRG 1952

Query: 733  GFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNS--SGTYGPQMSQYG 790
               +G+ ++     YG   +G S S  P   G  H+     ++S S  S  YG   S  G
Sbjct: 1953 RHGSGSGQSSSYGPYG-SGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSG 2011

Query: 791  PQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRP 850
                + +  + SG  S+S    G   G S+++  HG G SQ  G    GR  S   Q+ P
Sbjct: 2012 HSSTHGQHGSASG-QSSSCGQHGASSGQSSSHGQHGSGSSQSSG---YGRQGSGSGQS-P 2066

Query: 851  FPGNMSSMTPSSPGMSQQG------------GPGMGPPMPTVNRKAQEA-AAAVMQAAAN 897
              G   S +  SP   + G            GPG+G      + ++    +++  Q  + 
Sbjct: 2067 GHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGSG 2126

Query: 898  SAQS----RQGSFPGMNQSG-----LMASSSPYSQ 923
            S  S    + GS  G +  G        SSS Y Q
Sbjct: 2127 SGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQ 2161



 Score = 94.0 bits (232), Expect = 1e-18
 Identities = 320/1466 (21%), Positives = 455/1466 (31%), Gaps = 162/1466 (11%)

Query: 44   HHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGG 103
            HH +   Q + + Q            Q      S  +S G   G +        Q   G 
Sbjct: 1169 HHESSSGQSSSYSQHGSGSGHSSGYGQHGSR--SGQSSRGERHGSSSGSSSHYGQHGSGS 1226

Query: 104  AKDSAAGGQADPPG-PPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG- 161
             + S  G Q    G  P   + G         G+   G       G   ++    +V G 
Sbjct: 1227 RQSSGHGRQGSGSGHSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQ 1286

Query: 162  ---GGGGPAAVPEFNNYYGSAAPASGGPGGRAGPC--FDQHG---GQQSP----GMGMMH 209
               G G  +A  +  +  G    + G  G  +G    FDQ G   GQ S     G G   
Sbjct: 1287 HESGSGHSSAYSQHGSGSGHFC-SQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQ 1345

Query: 210  SASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGG-GGGSGGGGGG 268
            S+     GA     P +  H     S   H   Y + G+G G     G  G GSG   G 
Sbjct: 1346 SSGYGRHGAGSGQSPSRGRH----GSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGF 1401

Query: 269  G----------GAGAGGAGAGAVAAA---AAAAAAAAGGGGGGGYGGSSAGYGVLSS-PR 314
            G          G    G+G+G  ++     + +  ++ G   G   GSS+ YG   S  R
Sbjct: 1402 GHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSR 1461

Query: 315  QQGGGMMMGPGGGGAASLSKAAAGSAAG------------GFQRFAGQNQHPSGATPTLN 362
            Q  G    G G G + S S+   GS +G            G+    G  +  S  +  L 
Sbjct: 1462 QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGLG 1521

Query: 363  QLLTSPSPMMRSYG--GSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
                S S     YG  GS   +SS        S   S     GA++G   +    G G  
Sbjct: 1522 HR-ESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSS 1580

Query: 421  MGAQY------AAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMG 474
              + Y      +  SP        S  + S G  G   GRS  S      +     +G  
Sbjct: 1581 QSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHH 1640

Query: 475  SNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWL 534
             +   Q    S +  GS    G  ++         G+ +G Q  + +  G ++   +   
Sbjct: 1641 ESSSGQSSSYSQHGSGSGHSSGYGQH---------GSRSG-QSSRGERHGSSSRSSS--- 1687

Query: 535  MPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTR 594
               +YGQ G       G     S   Q P        L   S           Q G G+ 
Sbjct: 1688 ---RYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSH--------GQHGSGSG 1736

Query: 595  SQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQ 654
                  P +      ++  Q    S    + S     +G   +     S SG  SS  DQ
Sbjct: 1737 RSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQ-SSTFDQ 1795

Query: 655  SNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQ 714
               +    S H   H S      S    GS  G + SR       S  G        GS 
Sbjct: 1796 EGSSTGQSSSHGQ-HGSGSSQSSSYGQQGSGSGQSPSRG---RHGSGSGHSSSYGQHGSG 1851

Query: 715  SESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGP----SMSPHPSPGGQMHAGI 770
            S  SS      S   Q  GF      + Q + Y    +G     S   H S  GQ   G 
Sbjct: 1852 SGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGE 1911

Query: 771  SSFQQSNSSGTYGPQMS---QYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQ 827
                 S SS +YG   S   Q    G +      S  PS    G G G   S      G 
Sbjct: 1912 QHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGS 1971

Query: 828  GPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEA 887
            G S   G    G   S+G+      G+  S +  S G  Q G           +  A   
Sbjct: 1972 GWSSSRGPYESGSGHSSGL------GHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQ 2025

Query: 888  AAAVMQAAANSAQS-----------------RQGS----FPGMNQSGLMASSSPYSQPMN 926
            +++  Q  A+S QS                 RQGS     PG  Q G  +  SP S   +
Sbjct: 2026 SSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSP-SYGRH 2084

Query: 927  NSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKS 986
             S S  ++ +  +   P +  SS    G  +  S   S         G   G  Q  S+S
Sbjct: 2085 GSGSGRSSSSGQHG--PGLGESSG--FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRS 2140

Query: 987  KKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLY 1046
             +SS     G         G          R  +    +GS     P+ G+         
Sbjct: 2141 GQSSRGERHGSSSGSSSRYGQHGSGS----RQSSGHGRQGSGSGHSPSRGRHGSGSGHSS 2196

Query: 1047 VCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPP 1106
               +   G  + +    +   + + +V     + S     Y Q+         +G+    
Sbjct: 2197 SHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQH--- 2253

Query: 1107 EVFSTGDTKKQPKL--QPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQ 1164
                 G T  Q     Q  S     S  G     S+ S+S  +  G     +P+   HG 
Sbjct: 2254 -----GSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQ-QGSGSGQSPSRGRHGS 2307

Query: 1165 MTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPF 1224
             +    G SS+   H   S  S SS    +    ++ +    S            +    
Sbjct: 2308 GS----GHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGH 2363

Query: 1225 GGMRKVPGSSEPFMTQGQMPNSSM--QDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHE 1282
                +  GS     ++G+   SS      Y Q  SG+  +LG GQ     +G+   +   
Sbjct: 2364 SSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQ-----HGSGSGQSPS 2418

Query: 1283 P-YGQQYPGQGPPSGQPPYGGHQPGLYPQQP--NYKRHMDGMYGPPAKRHEGDMYNMQYS 1339
            P  G+   G G  S   PYG        + P  +   H  G+    ++  +   Y    S
Sbjct: 2419 PSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGS 2478

Query: 1340 SQQQEMYNQYGGSYSGPDRRPIQ-GQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSS 1398
            S      +   GS SG      Q G      S     G G  Q+ G   Q  G    S  
Sbjct: 2479 SSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSG----SGQ 2534

Query: 1399 SEGPQQNMWAARNDMPYPYQNRQGPG 1424
            S G  Q    +R     P   R G G
Sbjct: 2535 SPGHGQRGSGSRQS---PSYGRHGSG 2557



 Score = 93.6 bits (231), Expect = 2e-18
 Identities = 312/1474 (21%), Positives = 460/1474 (31%), Gaps = 164/1474 (11%)

Query: 67   QQQQQQQHPISN--NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKP 124
            Q  + +QH  S+  ++S G  G G+ Q      Q    G   S     +         + 
Sbjct: 735  QSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQH 794

Query: 125  GDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG 184
            G         G    G  +  G G   +        G G G +     + ++ S      
Sbjct: 795  GSGTSCSSSCGHYESGSGQASGFGQHES--------GSGQGYSQHGSASGHFSSQGRHGS 846

Query: 185  GPGGRAGPCFDQHGGQQSPGMGMMHSAS--AAAAGAPGSMDPLQNSHEGYPNSQCNHYPG 242
              G  +          QS   G   SAS  A+  G  GS       H G   S     P 
Sbjct: 847  TSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGH-GQRGSGSGQSPS 905

Query: 243  YSRPGAGGGGGGGGGG-GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAA----GGGGG 297
            Y R G+G G     G  G GSG   G G   + G  +G     + +  +++    G   G
Sbjct: 906  YGRHGSGSGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGSRSG 965

Query: 298  --------GGYGGSSAGYGVLSS-PRQQGGGMMMGPGGGGAASLSKAAAGSAAG------ 342
                    G   GSS+ YG   S  RQ  G    G G G + S S+   GS +G      
Sbjct: 966  QSSRSEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYG 1025

Query: 343  ------GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYG--GSYPEYSSPSAPPPPPSQ 394
                  G+    G  +  SG +  L     S S     YG  GS   +SS        S 
Sbjct: 1026 PYRSGSGWSSSRGPYESGSGHSSGLGHR-ESRSGQSSGYGQHGSSSGHSSTHGQHGSTSG 1084

Query: 395  PQSQAAAAGAAAGGQQAAAGMGLGKDMGAQY------AAASPAWAAAQQRSHPAMSPGTP 448
              S     GA++G   +    G G    + Y      +  SP        S  + S G  
Sbjct: 1085 QSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRH 1144

Query: 449  GPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRT 508
            G   GRS  S      +     +G   +   Q    S +  GS    G  ++        
Sbjct: 1145 GSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQH-------- 1196

Query: 509  PGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGV-----SGYCQQGQQPYYSQQPQPP 563
             G+ +G Q  + +  G ++   +       YGQ G      SG+ +QG    +S  P   
Sbjct: 1197 -GSRSG-QSSRGERHGSSSGSSS------HYGQHGSGSRQSSGHGRQGSGSGHS--PSRG 1246

Query: 564  HLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGK----PNHEDL---------N 610
                   +  S  Q      +  S+  Y +RS      G+      H            +
Sbjct: 1247 RHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGH 1306

Query: 611  LIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHL 670
               Q +  S    S + D   + T  + S     SGS+ S G   + A S  SP    H 
Sbjct: 1307 FCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSPSRGRHG 1366

Query: 671  SSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQ 730
            S        S   S  G + S SG  S +   GS           ESSS     QS    
Sbjct: 1367 SG-------SGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSW----QSSGCT 1415

Query: 731  ERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYG 790
            + G  +G+  +    Q+G +    S        G+ H   SS   S+S G +G    Q  
Sbjct: 1416 QHG--SGSGHSSSYEQHGSRSGQSSR-------GERHG--SSSGSSSSYGQHGSGSRQSL 1464

Query: 791  PQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRP 850
              G +      S  PS    G G G   S +    G G S   G    G   S+G+    
Sbjct: 1465 GHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGL---- 1520

Query: 851  FPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMN 910
              G+  S +  S G  Q G           +      +++  Q  A+S QS      G  
Sbjct: 1521 --GHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSG 1578

Query: 911  QS-----GLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAAS------------V 953
             S     G   S S  S P +      + Q+P Y    +    S++S             
Sbjct: 1579 SSQSSGYGRQGSGSGQS-PGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGF 1637

Query: 954  GLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKL 1013
            G  +  S   S         G   G  Q  S+S +SS     G         G       
Sbjct: 1638 GHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGS- 1696

Query: 1014 WVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNV 1073
               R  +    +GS     P+ G+    L       +   G  + +    +   + + +V
Sbjct: 1697 ---RQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSV 1753

Query: 1074 GTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKL--QPPSPANSGSL 1131
                 + S     Y Q+         +G+         G T  Q     Q  S     S 
Sbjct: 1754 FGQHESGSGHSSAYSQHGSGSGHFCSQGQH--------GSTSGQSSTFDQEGSSTGQSSS 1805

Query: 1132 QGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFP 1191
             G     S+ S+S  +  G     +P+   HG  +    G SS+   H   S  S SS  
Sbjct: 1806 HGQHGSGSSQSSSYGQ-QGSGSGQSPSRGRHGSGS----GHSSSYGQHGSGSGWSSSSGR 1860

Query: 1192 KRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSM--Q 1249
              +    ++ +    S            +        +  GS     ++G+   SS    
Sbjct: 1861 HGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGEQHGSSSGSS 1920

Query: 1250 DMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEP-YGQQYPGQGPPSGQPPYGGHQPGLY 1308
              Y Q  SG+  +LG GQ     +G+   +   P  G+   G G  S   PYG       
Sbjct: 1921 SSYGQHGSGSRQSLGHGQ-----HGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSS 1975

Query: 1309 PQQP--NYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQ-GQY 1365
             + P  +   H  G+    ++  +   Y    SS      +   GS SG      Q G  
Sbjct: 1976 SRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGAS 2035

Query: 1366 PYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGG 1425
                S     G G  Q+ G   Q  G    S  S G  Q    +R    Y          
Sbjct: 2036 SGQSSSHGQHGSGSSQSSGYGRQGSG----SGQSPGHGQRGSGSRQSPSYGRHGSGSGRS 2091

Query: 1426 PTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVS 1459
             +     PG+  +      +      S +  H S
Sbjct: 2092 SSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGS 2125



 Score = 86.7 bits (213), Expect = 2e-16
 Identities = 234/999 (23%), Positives = 337/999 (33%), Gaps = 137/999 (13%)

Query: 15   GEAPAAPPHQQHHHHHHAHHHHH----HAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQ 70
            G +     H+    H  A+  H     H      H +   Q + F Q+     Q     Q
Sbjct: 1749 GHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQ 1808

Query: 71   QQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS-KPGDEDD 129
                  S ++S G  G G+ Q  P   +   G    S+ G      G    S + G    
Sbjct: 1809 HGSGS-SQSSSYGQQGSGSGQ-SPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSG 1866

Query: 130  APPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG----- 184
                 G      ++  G    G+     +     G  +        +GS++ +S      
Sbjct: 1867 QSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGEQHGSSSGSSSSYGQH 1926

Query: 185  GPGGRAGPCFDQHG---GQQ-SPGMGMMHSASAAAA--GAPGSMDPLQNSHEGYPNSQCN 238
            G G R      QHG   GQ  SP  G   S S  ++  G  GS     +S   Y  S   
Sbjct: 1927 GSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSSSRGPY-ESGSG 1985

Query: 239  HYPGY----SRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
            H  G     SR G   G G  G   G S   G  G A    +  G   A++  +++    
Sbjct: 1986 HSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGASSGQSSSHGQH 2045

Query: 295  GGGG----GYGGSSAGYGVLSSPRQQGGGMMMGPGGG--GAASLSKAAAGSAAGGFQRFA 348
            G G     GYG   +G G      Q+G G    P  G  G+ S   +++G    G    +
Sbjct: 2046 GSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESS 2105

Query: 349  GQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGG 408
            G   H S +  + +    S       +   Y ++ S S      S+ +   +++G+++  
Sbjct: 2106 GFGHHESSSGQSSSY---SQHGSGSGHSSGYGQHGSRSGQS---SRGERHGSSSGSSSRY 2159

Query: 409  QQAAAGMGLGKDMGAQYAAA--SPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMK 466
             Q  +G       G Q + +  SP+       S  + S G  G   GRS           
Sbjct: 2160 GQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSG 2219

Query: 467  RPQLYGM---GSNPHSQPQQSSPYPG-----GSYGPPGPQRYPIGIQGRTPGAMAGMQYP 518
               ++G    GS   S   Q     G     G +G    Q      +G + G  +     
Sbjct: 2220 HSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHG-- 2277

Query: 519  QQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQ 578
             Q  SG +            YGQQG SG    GQ P  S+          + Y    S  
Sbjct: 2278 -QHGSGSS--------QSSSYGQQG-SG---SGQSP--SRGRHGSGSGHSSSYGQHGSGS 2322

Query: 579  RYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATL 638
             +         G G  S      G  +HE          SS    SG       G+ +  
Sbjct: 2323 GWSSSSGRHGSGSGQSS------GFGHHE----------SSSWQSSGYTQH---GSGSGH 2363

Query: 639  SSAVSASGSTSSQGDQ------SNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSR 692
            SS+    GS S Q  +      S+ + S +  H S    S+  G   S  G     ++ R
Sbjct: 2364 SSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGR 2423

Query: 693  SGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQT 752
             G  S     G      P GS S  SS     +S      G      R+ Q + YG  Q 
Sbjct: 2424 HGSGS-----GQSSSYSPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYG--QH 2476

Query: 753  GPSMSPHPSPGGQMHAGISSFQQSNSSGTYGP---QMSQYGPQGN-------YSRPPAYS 802
            G S S H S  GQ H   S   QS+S G +G    Q S +G  G+       Y R  + S
Sbjct: 2477 GSS-SGHSSTHGQ-HGSTSG--QSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGS 2532

Query: 803  GV------------PSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRP 850
            G              S SY   G G G S+++  HG G  +  G    G   S+  Q+  
Sbjct: 2533 GQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSG---FGHHESSSGQSSS 2589

Query: 851  FPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQS----RQGSF 906
            +  + S    SS G  Q G           +  +  +++   Q  + S QS    RQGS 
Sbjct: 2590 YSQHGSGSGHSS-GYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSG 2648

Query: 907  PGMNQ------SGLMASSSPYSQPMNNSSSLMNTQAPPY 939
             G +       SGL  SS   S   + S S  ++   PY
Sbjct: 2649 SGQSPSRGRHGSGLGHSS---SHGQHGSGSGRSSSRGPY 2684



 Score = 84.3 bits (207), Expect = 1e-15
 Identities = 216/1029 (20%), Positives = 328/1029 (31%), Gaps = 149/1029 (14%)

Query: 38   HAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDME 97
            H+  L H  +   Q + + Q            Q      S +      G      G    
Sbjct: 1516 HSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHG----STSGQSSSCGQHGASSGQSSS 1571

Query: 98   QPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPV 157
              QHG     ++G            + G      P  G+   G  + P  G  G+     
Sbjct: 1572 HGQHGSGSSQSSG----------YGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRS 1621

Query: 158  AVPGG-GGGPAAVPEFNNYYGSAAPASG----GPGGRAGPCFDQHG---GQQSPGMGMMH 209
            +  G  G G      F ++  S+  +S     G G      + QHG   GQ S G     
Sbjct: 1622 SSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGS 1681

Query: 210  SASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG 269
            S+ +++          Q+S  G   S     P   R G+G G     G  G   G     
Sbjct: 1682 SSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSR 1741

Query: 270  GAGAGGAGAGAV-----AAAAAAAAAAAGGGGGG-----GYGGSSAGYGVLSSPRQQGGG 319
            G     +G  +V     + +  ++A +  G G G     G  GS++G            G
Sbjct: 1742 GPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTG 1801

Query: 320  MMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSY 379
                 G  G+ S   ++ G    G  +   + +H SG+                 +  SY
Sbjct: 1802 QSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGSGS----------------GHSSSY 1845

Query: 380  PEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAA----ASPAWAAA 435
             ++ S S            ++++G    G   ++G G  +    Q +      S +  ++
Sbjct: 1846 GQHGSGSG----------WSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSS 1895

Query: 436  QQRSHPAMS-PGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG-GSYG 493
                H + S   + G   G S GS              +G   H      SP P  G +G
Sbjct: 1896 SYEQHGSRSGQSSRGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHG 1955

Query: 494  PPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATW---KETFWLMPPQYGQQGVSGYCQQ 550
                Q    G  G   G  +  + P +  SG ++    +E+       YGQ G S     
Sbjct: 1956 SGSGQSSSYGPYGSGSG-WSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSS 2014

Query: 551  GQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLN 610
                + S   Q              S             GYG +     +   P H    
Sbjct: 2015 THGQHGSASGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSG--SGQSPGHGQRG 2072

Query: 611  LIQQERPSSLPDLSGS--------------------IDDLPTGTEATLSSAVSASGSTSS 650
               ++ PS     SGS                      +  +G  ++ S   S SG +S 
Sbjct: 2073 SGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSG 2132

Query: 651  QGDQSNPA--QSPFSPHASPHLSSIPGGP--SPSPVGSPVGSNQSRSGPISPASIPGSQM 706
             G   + +   S    H S   SS   G   S S   S  G   S SG        GS  
Sbjct: 2133 YGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGS 2192

Query: 707  PPQPPGSQSESSSHPALSQSPMPQERGFMA-------GTQRNPQMAQYGPQQTG-PSMSP 758
                   Q  S S  + S+ P     G  +       G+  +   +Q+G       S   
Sbjct: 2193 GHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQ 2252

Query: 759  HPSPGGQMHAGISSFQQSNSS----------GTYGPQMSQYGPQGNYS-------RPPAY 801
            H S  GQ     S+F Q  SS          G+   Q S YG QG+ S       R  + 
Sbjct: 2253 HGSTSGQS----STFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGSG 2308

Query: 802  SGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPS 861
            SG  S+SY   G G G S+++  HG G  Q  G    G   S+  Q+  +  + S    S
Sbjct: 2309 SG-HSSSYGQHGSGSGWSSSSGRHGSGSGQSSG---FGHHESSSWQSSGYTQHGSGSGHS 2364

Query: 862  SPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPY 921
            S    +Q G   G    +   +   ++ +      + + SRQ    G + SG   S SP 
Sbjct: 2365 S--SYEQHGSRSG--QSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSP- 2419

Query: 922  SQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQ 981
            S+  + S S  ++   PY           +  G +    P ES         G   G   
Sbjct: 2420 SRGRHGSGSGQSSSYSPY----------GSGSGWSSSRGPYES-------GSGHSSGLGH 2462

Query: 982  PESKSKKSS 990
             ES+S +SS
Sbjct: 2463 RESRSGQSS 2471



 Score = 80.5 bits (197), Expect = 2e-14
 Identities = 178/841 (21%), Positives = 263/841 (31%), Gaps = 115/841 (13%)

Query: 74   HPISNNNSLGGAGGGAPQPGPDMEQPQHGGA--------KDSAAGGQADPPGPPLLSKPG 125
            H  S +    G G      G      QHG A        +  A+ GQ+   G     + G
Sbjct: 1992 HRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGASSGQSSSHG-----QHG 2046

Query: 126  DEDDAPPKMGEPAGGRYEHPGLGALGT---QQPPVAVPGGGGGPAAVPE----------- 171
                     G    G  + PG G  G+   Q P     G G G ++              
Sbjct: 2047 SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSG 2106

Query: 172  FNNYYGSAAPASG----GPGGRAGPCFDQHG---GQQSPGMGMMHSASAAAAGAPGSMDP 224
            F ++  S+  +S     G G      + QHG   GQ S G     S+ +++         
Sbjct: 2107 FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGS 2166

Query: 225  LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAV--- 281
             Q+S  G   S   H P   R G+G G     G  G   G     G     +G  +V   
Sbjct: 2167 RQSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQ 2226

Query: 282  --AAAAAAAAAAAGGGGGG-----GYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSK 334
              + +  ++A +  G G G     G  GS++G            G     G  G+ S   
Sbjct: 2227 HESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQS 2286

Query: 335  AAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQ 394
            ++ G    G  +   + +H SG+                 +  SY ++ S S        
Sbjct: 2287 SSYGQQGSGSGQSPSRGRHGSGS----------------GHSSSYGQHGSGSG------- 2323

Query: 395  PQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAA----ASPAWAAAQQRSHPAMS-PGTPG 449
                ++++G    G   ++G G  +    Q +      S +  ++    H + S   + G
Sbjct: 2324 ---WSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRG 2380

Query: 450  PTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG-GSYGPPGPQRYPIGIQGRT 508
               G S GS              +G   H      SP P  G +G    Q       G  
Sbjct: 2381 ERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSG 2440

Query: 509  PGAMAGMQYPQQQDSGDATW---KETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHL 565
             G  +  + P +  SG ++    +E+       YGQ G S         + S   Q    
Sbjct: 2441 SG-WSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSC 2499

Query: 566  PPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSG 625
                      S             GYG +     +   P H       ++ PS     SG
Sbjct: 2500 GQHGASSGQSSSHGQHGSGSSQSSGYGRQGSG--SGQSPGHGQRGSGSRQSPSYGRHGSG 2557

Query: 626  SIDDLPTGTEATLSSAVSASGS-TSSQGDQSNPAQ--------SPFSPHASPHLSSIPGG 676
            S     +G   +     S  G   SS G  S+ +Q        S +  H S    S  G 
Sbjct: 2558 SGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGE 2617

Query: 677  PSPSPVGSPV-------GSNQSR--------SGPISPASIPGSQMPPQPPGSQSESSSHP 721
               S  GS         GS QS         SG        GS +       Q  S S  
Sbjct: 2618 RHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGR 2677

Query: 722  ALSQSPMPQERGFMA-------GTQRNPQMAQYGPQQTG-PSMSPHPSPGGQMHAGISSF 773
            + S+ P     G  +       G+  +   +Q+G       S   H S  GQ        
Sbjct: 2678 SSSRGPYESRLGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEG 2737

Query: 774  QQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPC 833
              +  S +YG + S       Y R  A SG  S S+   G G G S++   HG G  Q  
Sbjct: 2738 SSTGQSSSYGHRGSGSSQSSGYGRHGAGSG-QSLSHGRHGSGSGQSSSYGQHGSGSGQSS 2796

Query: 834  G 834
            G
Sbjct: 2797 G 2797



 Score = 79.7 bits (195), Expect = 3e-14
 Identities = 152/731 (20%), Positives = 231/731 (31%), Gaps = 116/731 (15%)

Query: 209 HSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGG 268
           H++ +  + + G  +   +SH+     QC    G S P  G  G G G        G G 
Sbjct: 169 HNSYSGQSSSYGEQN--SDSHQSSGRGQCGSGSGQS-PNYGQHGSGSGQSSSNDTHGSGS 225

Query: 269 GGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG--GSSAGYGVLSSPRQQGGGMMMGPGG 326
           G +        +   ++  +   +G G   GYG  GS +G        +   G     G 
Sbjct: 226 GQSSGFSQHKSSSGQSSGYSQHGSGSGHSSGYGQHGSRSGQSSRGERHRSSSGSSSSYGQ 285

Query: 327 GGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPS 386
            G+ S      G    G ++     +H SG+                 +  S+ ++ S S
Sbjct: 286 HGSGSRQSLGHGRQGSGSRQSPSHVRHGSGS----------------GHSSSHGQHGSGS 329

Query: 387 APPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPG 446
                     S + + G    G    +G G  +    Q    S  ++     S  + S G
Sbjct: 330 ----------SYSYSRGHYESGSGQTSGFGQHESGSGQ----SSGYSKHGSGSGHSSSQG 375

Query: 447 TPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQG 506
             G T G++  S       ++   YG   +          +  GS              G
Sbjct: 376 QHGSTSGQASSSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGS--------------G 421

Query: 507 RTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLP 566
           ++PG         Q+ SG            P  GQ G          PY S         
Sbjct: 422 QSPG-------HGQRGSGSG--------QSPSSGQHGTGFGRSSSSGPYVS--------- 457

Query: 567 PQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGS 626
             + Y           +       +G+ S      G+         + ER  S    S S
Sbjct: 458 -GSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAGSSSS 516

Query: 627 IDDLPTGTEATLSSAVSASGSTSS------QGDQSNPAQSPFSPHASPHLSSIPGGPSPS 680
                +G+  +L  +   SGS  S      + +  +   S + PH      S   GP  S
Sbjct: 517 YGQHGSGSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQSSSYGPHGYGSGRSSSRGPYES 576

Query: 681 PVG--SPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALS-QSPMPQERGFMAG 737
             G  S +G  +SRSG  S     GS       G  S    H + S QS    + G  +G
Sbjct: 577 GSGHSSGLGHQESRSGQSSGYGQHGSS-----SGHSSTHGQHGSTSGQSSSCGQHGATSG 631

Query: 738 TQR--------NPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQY 789
                      + Q ++YG Q +G   SP     G      SS+ Q  S   +    S  
Sbjct: 632 QSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWS---SSN 688

Query: 790 GPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNR 849
           GP G+ S          +S  G   G G S+    HG G S   G    G        +R
Sbjct: 689 GPHGSVS--------GQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHG--------SR 732

Query: 850 PFPGNMSSMTPSSPGMSQQ-GGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPG 908
               + S    SS G+S   G  G G    + + +    +        + + S   S  G
Sbjct: 733 SGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHG 792

Query: 909 MNQSGLMASSS 919
            + SG   SSS
Sbjct: 793 QHGSGTSCSSS 803



 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 198/851 (23%), Positives = 288/851 (33%), Gaps = 85/851 (9%)

Query: 176 YGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNS 235
           YG     S    GR G C    G  QSP  G   S S  ++          N   G  + 
Sbjct: 179 YGEQNSDSHQSSGR-GQCGS--GSGQSPNYGQHGSGSGQSSS---------NDTHGSGSG 226

Query: 236 QCNHYPGY-SRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
           Q + +  + S  G   G    G G G S  G G  G+ +G +  G    +++ ++++ G 
Sbjct: 227 QSSGFSQHKSSSGQSSGYSQHGSGSGHS-SGYGQHGSRSGQSSRGERHRSSSGSSSSYGQ 285

Query: 295 GGGG---GYGGSSAGYGVLSSPRQ----QGGGMMMGPGGGGAASLSKAAAGSAAGGFQRF 347
            G G     G    G G   SP       G G     G  G+ S    + G    G  + 
Sbjct: 286 HGSGSRQSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHGSGSSYSYSRGHYESGSGQT 345

Query: 348 AGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAG 407
           +G  QH SG+  +      S       +  S  ++ S S       Q    ++   ++ G
Sbjct: 346 SGFGQHESGSGQSSGY---SKHGSGSGHSSSQGQHGSTSGQASSSGQ-HGSSSRQSSSYG 401

Query: 408 GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKR 467
             ++A+    G+   +  +  SP        S  + S G  G   GRS  S   P V   
Sbjct: 402 QHESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSSGQHGTGFGRSSSS--GPYVSGS 459

Query: 468 PQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDAT 527
               G G +  S  + SS Y    +G         G  G   G     Q  + +  G + 
Sbjct: 460 GYSSGFGHH-ESSSEHSSGYT--QHGSGSGHSSGHGQHGSRSG-----QSSRGERQGSSA 511

Query: 528 WKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMS 587
              +       YGQ G       G   + S   Q P         PS+ +     +Q  S
Sbjct: 512 GSSS------SYGQHGSGSRQSLGHSRHGSGSGQSPS--------PSRGRHESGSRQSSS 557

Query: 588 --QEGYG---TRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAV 642
               GYG   + S+ P   G  +   L    QE  S      G      +G  +T     
Sbjct: 558 YGPHGYGSGRSSSRGPYESGSGHSSGLG--HQESRSGQSSGYGQ-HGSSSGHSSTHGQHG 614

Query: 643 SASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIP 702
           S SG +SS G     A S  S     H S           GS  G + SR    S     
Sbjct: 615 STSGQSSSCGQHG--ATSGQSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDFG-H 671

Query: 703 GSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPS-MSPHPS 761
            S       GS   SS+ P  S S      G  +G+ ++   +Q+G   +  S    H S
Sbjct: 672 SSSYGQHGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGS 731

Query: 762 PGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISAN 821
             GQ          S  S +YG   S       + R  + SG  S S    G   G S++
Sbjct: 732 RSGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSG-HSPSRVRHGSSSGHSSS 790

Query: 822 NQMHGQGP--SQPCGAVPLGRMPSAGM-QNRPFPGNMSSMTPSSPG-MSQQGGPGMGPPM 877
           +  HG G   S  CG    G   ++G  Q+    G   S   S+ G  S QG  G     
Sbjct: 791 HGQHGSGTSCSSSCGHYESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGSTSGQ 850

Query: 878 PTV-----NRKAQEAAAAVMQAAANSAQSR------QGSFPGMNQSGLMASSSPYSQPMN 926
            +      +   Q ++    ++A++ A  R       G  PG  Q G  +  SP S   +
Sbjct: 851 SSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGSGQSP-SYGRH 909

Query: 927 NSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESK-LPLPLKADGKEEGTPQPESK 985
            S S  ++ +  +       + S  S G     S G+S          G      Q  S+
Sbjct: 910 GSGSGRSSSSGRHG------SGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGSR 963

Query: 986 SKKSSSSTTTG 996
           S +SS S   G
Sbjct: 964 SGQSSRSEQHG 974



 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 172/755 (22%), Positives = 248/755 (32%), Gaps = 114/755 (15%)

Query: 100  QHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAV 159
            QHG     ++ G+          + G    +  + G+   G  +  G G  G+       
Sbjct: 2135 QHGSRSGQSSRGE----------RHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPS 2184

Query: 160  PGGGGGPAAVPEFNNYYGSAAPASGGPG---GRAG--PCFDQH---GGQQSP----GMGM 207
             G  G  +     +  +GS +  S   G    R+G    F QH    G  S     G G 
Sbjct: 2185 RGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGS 2244

Query: 208  MHSASAAAAGAPGSMDPL---QNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGG 264
             H  S    G+          + S  G  +S   H  G S+  + G  G G G     G 
Sbjct: 2245 GHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGR 2304

Query: 265  GGGGGGA----GAGGAGAGAVAAAAAAAAAAAGGGGGG----------GYGGSSAGYGVL 310
             G G G     G  G+G+G  +++    + +    G G          GY    +G G  
Sbjct: 2305 HGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHS 2364

Query: 311  SSPRQQGGGMMMGPGGG--GAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSP 368
            SS  Q G        G   G++S S ++ G    G ++  G  QH SG+         SP
Sbjct: 2365 SSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQ-------SP 2417

Query: 369  SPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAA 428
            SP    +G    + SS S    P       +++ G    G   ++G+G  +    Q    
Sbjct: 2418 SPSRGRHGSGSGQSSSYS----PYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQ---- 2469

Query: 429  SPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYP 488
            S  +      S  + + G  G T G+S                  G +  S  Q SS   
Sbjct: 2470 SSGYGQHGSSSGHSSTHGQHGSTSGQSSSC---------------GQHGASSGQSSSH-- 2512

Query: 489  GGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYC 548
             G +G    Q    G QG   G   G     Q+ SG            P YG+ G     
Sbjct: 2513 -GQHGSGSSQSSGYGRQGSGSGQSPGHG---QRGSGSR--------QSPSYGRHG----- 2555

Query: 549  QQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHED 608
              G     S       L   + +   +S       Q  S   +G+ S      G+     
Sbjct: 2556 -SGSGRSSSSGQHGSGLGESSGFGHHESSSG----QSSSYSQHGSGSGHSSGYGQHGSRS 2610

Query: 609  LNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPA----QSPFSP 664
                + ER  S    S       +G+  +       SGS  S     + +     S    
Sbjct: 2611 GQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQ 2670

Query: 665  HASPHLSSIPGGPSPSPVG--SPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPA 722
            H S    S   GP  S +G  S  G ++S SG  S  S  GS         Q  S+S   
Sbjct: 2671 HGSGSGRSSSRGPYESRLGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTS--- 2727

Query: 723  LSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSP----HPSPGGQMHAGISSFQQSNS 778
              QS    + G   G     Q + YG + +G S S     H +  GQ  +       S  
Sbjct: 2728 -GQSSTFDQEGSSTG-----QSSSYGHRGSGSSQSSGYGRHGAGSGQSLSHGRHGSGSGQ 2781

Query: 779  SGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPG 813
            S +YG   S  G    YS+  + SG    SY   G
Sbjct: 2782 SSSYGQHGSGSGQSSGYSQHGSGSGQDGYSYCKGG 2816



 Score = 58.9 bits (141), Expect = 5e-08
 Identities = 199/891 (22%), Positives = 292/891 (32%), Gaps = 134/891 (15%)

Query: 633  GTEATLSSAVSASGSTSSQGDQ------SNPAQSPFSPHASPHLSSIPGGPSPSPVGSPV 686
            G+ +  SS     GS S Q  +      S+ + S +  H S    S+  G   S      
Sbjct: 248  GSGSGHSSGYGQHGSRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQGS------ 301

Query: 687  GSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQ 746
            GS QS S  +   S  G        GS S  S      +S   Q  GF      + Q + 
Sbjct: 302  GSRQSPSH-VRHGSGSGHSSSHGQHGSGSSYSYSRGHYESGSGQTSGFGQHESGSGQSSG 360

Query: 747  YGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGP---QMSQYGPQGNYSRPPAYSG 803
            Y    +G   S H S  GQ H   S   Q++SSG +G    Q S YG   + SR  +  G
Sbjct: 361  YSKHGSG---SGHSSSQGQ-HGSTSG--QASSSGQHGSSSRQSSSYGQHESASRHSSGRG 414

Query: 804  VPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFP---------GN 854
              S+  SG  PG G   +    GQ PS        GR  S+G    P+          G+
Sbjct: 415  QHSSG-SGQSPGHGQRGSGS--GQSPSSGQHGTGFGRSSSSG----PYVSGSGYSSGFGH 467

Query: 855  MSSMTPSSPGMSQQGGP----------GMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQG 904
              S +  S G +Q G            G      +   +   +A +      + + SRQ 
Sbjct: 468  HESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAGSSSSYGQHGSGSRQS 527

Query: 905  SFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSS---------AASVGL 955
                 + SG   S SP S+  + S S  ++   P+       +S          ++ +G 
Sbjct: 528  LGHSRHGSGSGQSPSP-SRGRHESGSRQSSSYGPHGYGSGRSSSRGPYESGSGHSSGLGH 586

Query: 956  ADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWV 1015
             +  S   S       + G      Q  S S +SSS    G    +    G         
Sbjct: 587  QESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGATSGQSSSHGQHGSGSSQS 646

Query: 1016 DRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGT 1075
             RY     ++GS     P+ G+   D        +   G    + N     ++   + G 
Sbjct: 647  SRY----GQQGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWSSSNGPHGSVSGQSS-GF 701

Query: 1076 SSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSG-----S 1130
               + S     Y Q+          G          G    Q        ++SG      
Sbjct: 702  GHKSGSGQSSGYSQH--------GSGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYG 753

Query: 1131 LQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSF 1190
              G  + QS+G        G     +P+   HG  +    G SS+   H   +  S S  
Sbjct: 754  QHGSGSHQSSGHGRQGSGSGH----SPSRVRHGSSS----GHSSSHGQHGSGTSCSSSC- 804

Query: 1191 PKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQD 1250
                       Y+ G       G+      +    G  +   +S  F +QG+  ++S   
Sbjct: 805  ---------GHYESGSGQASGFGQHESGSGQ----GYSQHGSASGHFSSQGRHGSTS--- 848

Query: 1251 MYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQ 1310
               QS S    +   GQ     YG      H   G+   G G  SGQ P  G +     Q
Sbjct: 849  --GQSSSSGQHDSSSGQSSS--YGQHESASHHASGRGRHGSG--SGQSPGHGQRGSGSGQ 902

Query: 1311 QPNYKRH--------MDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYG------------ 1350
             P+Y RH          G +G  + +  G  +  + SS Q   Y Q+G            
Sbjct: 903  SPSYGRHGSGSGRSSSSGRHGSGSGQSSG--FGHKSSSGQSSGYTQHGSGSGHSSSYEQH 960

Query: 1351 GSYSGPDRRPIQ-GQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAA 1409
            GS SG   R  Q G      S     G G  Q+ G   Q   G  QS S    +    + 
Sbjct: 961  GSRSGQSSRSEQHGSSSGSSSSYGQHGSGSRQSLG-HGQHGSGSGQSPSPSRGRHGSGSG 1019

Query: 1410 RNDMPYPYQNRQGPGGPTQAPPY-PGMNRTDDMMVPDQRINHESQWPSHVS 1459
            ++    PY  R G G  +   PY  G   +  +   + R    S +  H S
Sbjct: 1020 QSSSYGPY--RSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGS 1068



 Score = 49.7 bits (117), Expect = 3e-05
 Identities = 84/399 (21%), Positives = 128/399 (32%), Gaps = 67/399 (16%)

Query: 24   QQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLG 83
            Q   +  H     H + H  H     Q  +  Q      Q     Q       S+     
Sbjct: 2469 QSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQ 2528

Query: 84   GAGGG-APQPGP----DMEQPQHG----GAKDSAAGGQADPPGPPLLSKPG-----DEDD 129
            G+G G +P  G       + P +G    G+  S++ GQ    G  L    G         
Sbjct: 2529 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQH---GSGLGESSGFGHHESSSG 2585

Query: 130  APPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGR 189
                  +   G     G G  G++    +     G  +        +GS +  S G G R
Sbjct: 2586 QSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHG-R 2644

Query: 190  AGPCFDQHGGQQSPGMGMMHSAS----AAAAGAPGSMDPLQN-----SHEGYPNSQCNHY 240
             G    Q   +   G G+ HS+S     + +G   S  P ++     S  G   S   H 
Sbjct: 2645 QGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRLGHSSVFGQHESGSGHS 2704

Query: 241  PGYSRPGAGGG--------GGGGGGG------GGGSGGGGGGGGAGAGGAGAGAVAAAAA 286
              YS+ G+G G        G   G        G  +G     G  G+G + +       A
Sbjct: 2705 SAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGA 2764

Query: 287  AAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQR 346
             +  +   G  G   G S+ YG              G G G ++  S+  +GS   G+  
Sbjct: 2765 GSGQSLSHGRHGSGSGQSSSYG------------QHGSGSGQSSGYSQHGSGSGQDGYSY 2812

Query: 347  FAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSP 385
              G + H  G++               SY  S+P  +SP
Sbjct: 2813 CKGGSNHDGGSS--------------GSYFLSFPSSTSP 2837



 Score = 43.9 bits (102), Expect = 0.002
 Identities = 81/328 (24%), Positives = 110/328 (33%), Gaps = 59/328 (17%)

Query: 1126 ANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDV 1185
            ++S    G  + QS G        G  + P+P+   HG  +    G+SS+ S +   S  
Sbjct: 2390 SSSYGQHGSGSRQSLGHGQHGSGSG--QSPSPSRGRHGSGS----GQSSSYSPYGSGSGW 2443

Query: 1186 SDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPN 1245
            S S            PY+ G      +G    E       G  +   SS    T GQ  +
Sbjct: 2444 SSS----------RGPYESGSGHSSGLGHR--ESRSGQSSGYGQHGSSSGHSSTHGQHGS 2491

Query: 1246 SSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQP 1305
            +S      QS S        GQ        S   +   YG+Q    G  SGQ P  G + 
Sbjct: 2492 TS-----GQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQ----GSGSGQSPGHGQRG 2542

Query: 1306 GLYPQQPNYKRHMDGMYGPPAKRHEGD-------MYNMQYSSQQQEMYNQYG-------- 1350
                Q P+Y RH  G     +    G          + + SS Q   Y+Q+G        
Sbjct: 2543 SGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSG 2602

Query: 1351 ----GSYSGPDRR-PIQGQYPYPYSRERMQGPGQIQTHGIPPQ-----------MMGGPL 1394
                GS SG   R    G      S     G G  Q+ G   Q             G  L
Sbjct: 2603 YGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGL 2662

Query: 1395 QSSSSEGPQQNMWAARNDMPYPYQNRQG 1422
              SSS G Q    + R+    PY++R G
Sbjct: 2663 GHSSSHG-QHGSGSGRSSSRGPYESRLG 2689



 Score = 31.6 bits (70), Expect = 8.9
 Identities = 63/270 (23%), Positives = 85/270 (31%), Gaps = 29/270 (10%)

Query: 1121 QPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQG-GRSSTISVH 1179
            Q P+    GS  G  +   T  +   +  G  +  + +    G      G G SS    H
Sbjct: 201  QSPNYGQHGSGSGQSSSNDTHGSGSGQSSGFSQHKSSSGQSSGYSQHGSGSGHSSGYGQH 260

Query: 1180 DPFSDVSDSSFPKRNSMTPNAPYQQ---GMSMPDVMGRMPYEPNKDPFGGMRKVPGS--S 1234
               S  S      R+S   ++ Y Q   G       GR      + P   +R   GS  S
Sbjct: 261  GSRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQGSGSRQSP-SHVRHGSGSGHS 319

Query: 1235 EPFMTQGQMPNSSMQDMYNQSPSGAMSNLGM-----GQRQQFPYGASYDRRHEPYGQQ-- 1287
                  G   + S    + +S SG  S  G      GQ   +    S        GQ   
Sbjct: 320  SSHGQHGSGSSYSYSRGHYESGSGQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGS 379

Query: 1288 YPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYN 1347
              GQ   SGQ      Q   Y Q  +  RH  G       +H          S Q   + 
Sbjct: 380  TSGQASSSGQHGSSSRQSSSYGQHESASRHSSG-----RGQHSS-------GSGQSPGHG 427

Query: 1348 QYGGSYSGPDRRPIQGQYPYPYSRERMQGP 1377
            Q G   SG  + P  GQ+   + R    GP
Sbjct: 428  QRG---SGSGQSPSSGQHGTGFGRSSSSGP 454


>gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo
            sapiens]
          Length = 412

 Score =  102 bits (253), Expect = 5e-21
 Identities = 98/347 (28%), Positives = 157/347 (45%), Gaps = 30/347 (8%)

Query: 973  DGKEEGTPQPESKSKKSSSST-------TTGEKITKVYELGNEPERKLWVDRYLTFMEER 1025
            +  EE  P  +  S  SS          T  E+  ++YEL  +P+RK ++D   +FM++R
Sbjct: 71   EAAEESRPGAQGPSSPSSQPPGLHPHEWTYEEQFKQLYELDADPKRKEFLDDLFSFMQKR 130

Query: 1026 GSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTS-SSAASSLK 1084
            G+PV+ +P + K+ LDL+ L+  V   GGL +V   K WRE+   L++ T+ +SAA +L+
Sbjct: 131  GTPVNRVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLR 190

Query: 1085 KQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNS 1144
             QY++YL+ +EC+  R    P E+ +  D+ ++   +    A    L G   P   G+  
Sbjct: 191  TQYMKYLYPYECE-TRALSSPGELQAAIDSNRREGRRQAYTAT--PLFGLAGPPPRGAQD 247

Query: 1145 MAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPN--APY 1202
             A  PG   P T +S    Q      G +S +  H   + +S S   K  S  PN     
Sbjct: 248  PALGPGPAPPATQSSPGPAQ------GSTSGLPAH-ACAQLSPSPIKKEESGIPNPCLAL 300

Query: 1203 QQGMSMPDVMGRM-PYEP--NKDPFGGMRKVPGSSEP--FMTQGQMP--NSSMQDMYNQS 1255
              G+++     ++ P EP   +    G    P    P  F+ +G++P     +    N +
Sbjct: 301  PVGLALGPTREKLAPEEPPEKRAVLMGPMDPPRPCMPPSFLPRGKVPLREERLDGPLNLA 360

Query: 1256 PSGAMS-NLGMGQRQQFPYGASYDRRHEPYGQQYPGQ--GPPSGQPP 1299
             SG  S N+ +        G  + RR      Q P     PPS  PP
Sbjct: 361  GSGISSINMALEINGVVYTGVLFARRQPVPASQGPTNPAPPPSTGPP 407


>gi|109255251 loricrin [Homo sapiens]
          Length = 312

 Score = 99.4 bits (246), Expect = 3e-20
 Identities = 95/296 (32%), Positives = 117/296 (39%), Gaps = 43/296 (14%)

Query: 66  QQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPG 125
           Q++Q   Q P+    + GG GGG    G        GG      GG     G    S  G
Sbjct: 4   QKKQPTPQPPVDCVKTSGGGGGGGGSGG--------GGCGFFGGGGSG---GGSSGSGCG 52

Query: 126 DEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG- 184
                    G   GG     G G +G         G GGG     +++   GS+   SG 
Sbjct: 53  YSGGGGYSGGGCGGGSSGGGGGGGIG---------GCGGGSGGSVKYSGGGGSSGGGSGC 103

Query: 185 -GPGGRAGPCFDQHGGQQSPG-MGMMHSASAAAAGAPGSMDPLQNSHEGYPNS--QCNHY 240
              GG    CF   GG  S G  G   S    ++G  G      +   G+     QC  Y
Sbjct: 104 FSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSG--GGSGCFSSGGGGFSGQAVQCQSY 161

Query: 241 PGYSRPGAGGGGGG----GGGGG---GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAA- 292
            G S  G+ GGG G    GGGGG   G SGGG G GG  +GG+G+G V++      + A 
Sbjct: 162 GGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAP 221

Query: 293 --GGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSK---AAAGSAAGG 343
               GGG   GG S G G  SS    GGG   G GGG +   S    +  GS  GG
Sbjct: 222 QPSYGGGSSGGGGSGGSGCFSS---GGGGGSSGCGGGSSGIGSGCIISGGGSVCGG 274



 Score = 89.7 bits (221), Expect = 3e-17
 Identities = 67/212 (31%), Positives = 89/212 (41%), Gaps = 25/212 (11%)

Query: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAG--AGAVAAAAAAAAAAAGGGGGGGYGGSS 304
           G GGGGG GGGG G  GGGG GGG+   G G   G   +       ++GGGGGGG GG  
Sbjct: 22  GGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCG 81

Query: 305 AGYGVLSSPRQQGGGMMMG-------PGGGGAASLSKAAAGSAAGGFQRFA----GQNQH 353
            G G   S +  GGG   G        GGGG+   S    GS+ GG   F+    G +  
Sbjct: 82  GGSG--GSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGG 139

Query: 354 PSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAA 413
            SG   +     +  +   +SYGG     SS        S   S     G+  G     +
Sbjct: 140 GSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGG-----SGCFSSGGGGGSVCGYSGGGS 194

Query: 414 GMGLGKDMGAQYAAASPAWAAAQQRSHPAMSP 445
           G G G   G     +   + ++QQ +  + +P
Sbjct: 195 GCGGGSSGG-----SGSGYVSSQQVTQTSCAP 221



 Score = 89.0 bits (219), Expect = 5e-17
 Identities = 68/227 (29%), Positives = 88/227 (38%), Gaps = 18/227 (7%)

Query: 82  LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMG--EPAG 139
           +GG GGG+   G  ++    GG+    +G  +   G       G    +    G     G
Sbjct: 77  IGGCGGGS---GGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGG 133

Query: 140 GRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGG 199
           G     G G   +        GGGG      +  +Y G +   SGG  G    CF   GG
Sbjct: 134 GGSSGGGSGCFSS--------GGGGFSGQAVQCQSYGGVS---SGGSSGGGSGCFSSGGG 182

Query: 200 QQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG 259
             S   G     S    G+ G       S +    + C   P Y   G+ GGGG GG G 
Sbjct: 183 GGSV-CGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGG-GSSGGGGSGGSGC 240

Query: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG 306
             SGGGGG  G G G +G G+    +   +   GG  GGG GGSS G
Sbjct: 241 FSSGGGGGSSGCGGGSSGIGSGCIISGGGSVCGGGSSGGGGGGSSVG 287



 Score = 85.1 bits (209), Expect = 7e-16
 Identities = 76/243 (31%), Positives = 94/243 (38%), Gaps = 41/243 (16%)

Query: 152 TQQPPV----AVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM 207
           T QPPV       GGGGG  +      ++G      G  G   G  +   GG    G G 
Sbjct: 9   TPQPPVDCVKTSGGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCG--YSGGGGYSGGGCGG 66

Query: 208 MHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGG------GGGG 261
             S      G  G                C    G S   +GGGG  GGG      GGGG
Sbjct: 67  GSSGGGGGGGIGG----------------CGGGSGGSVKYSGGGGSSGGGSGCFSSGGGG 110

Query: 262 SG----GGGG--GGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
           SG    GGGG  GGG+G   +G G  ++   +   ++GGGG  G       YG +SS   
Sbjct: 111 SGCFSSGGGGSSGGGSGCFSSGGGG-SSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGS 169

Query: 316 QGGGM-MMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRS 374
            GGG      GGGG +    +  GS  GG       + + S    T  Q   +P P   S
Sbjct: 170 SGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVT--QTSCAPQP---S 224

Query: 375 YGG 377
           YGG
Sbjct: 225 YGG 227


>gi|55750053 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 98.2 bits (243), Expect = 8e-20
 Identities = 157/662 (23%), Positives = 216/662 (32%), Gaps = 132/662 (19%)

Query: 374 SYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWA 433
           S G + P Y  P   PP P  P S      A+     +    G    M    +    A  
Sbjct: 152 SQGPARP-YHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPP 210

Query: 434 AAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYG 493
            A    HP + PG  G   G   G PM P         G  +     P  ++P    S G
Sbjct: 211 GAPP-PHPQLYPGGTG---GVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSG 266

Query: 494 PPG-----PQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYC 548
             G     P   P+G  G  P A     +P    +           +PP    + ++   
Sbjct: 267 ASGAPPTKPPTTPVG-GGNLPSAPPPANFPHVTPN-----------LPPPPALRPLNN-- 312

Query: 549 QQGQQPYYSQQPQPPHLP-PQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHE 607
                P    QP P HLP P A              Q M     G    P LAP      
Sbjct: 313 ASASPPGLGAQPLPGHLPSPHAM------------GQGMGGLPPGPEKGPTLAPS----- 355

Query: 608 DLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFS---- 663
                    P SLP  S S    P     + SS+ SA+ S+SS    S+ +  P S    
Sbjct: 356 ---------PHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALP 406

Query: 664 --PHASPHLSSIP---------------------GGPSPSPVGSPVGSNQSRSGPISPAS 700
             PH+ P  +S+                      G P P P G  + ++ +  GP  P++
Sbjct: 407 SYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPST 466

Query: 701 IPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHP 760
             G+Q    PP     S+ H    Q    Q++      Q+       GP    P   PHP
Sbjct: 467 --GAQSTAHPP----VSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP--PGAFPHP 518

Query: 761 SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGP-GPGMGIS 819
             GG  H     +  S S G+  P      P G    PP +S V S S +GP GP +  S
Sbjct: 519 LEGGSSHHA-HPYAMSPSLGSLRPY-----PPGPAHLPPPHSQV-SYSQAGPNGPPVSSS 571

Query: 820 ANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPT 879
           +N+       S PC                         +  SP    QG P   PP+PT
Sbjct: 572 SNSSSSTSQGSYPC-------------------------SHPSPSQGPQGAPYPFPPVPT 606

Query: 880 VNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASS------------SPYSQPMNN 927
           V   +   +  +   A++ A  +  S PG    G  A S             P S P   
Sbjct: 607 VTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFR 666

Query: 928 SSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLP-LPLKADGKEEGTPQPESKS 986
           + +    +       P      + +VG   +   G S LP LP        G P   ++ 
Sbjct: 667 TGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQI 726

Query: 987 KK 988
           K+
Sbjct: 727 KQ 728



 Score = 86.3 bits (212), Expect = 3e-16
 Identities = 120/488 (24%), Positives = 171/488 (35%), Gaps = 91/488 (18%)

Query: 545 SGYCQQGQQPYYSQQPQPPHLPPQAQ---YLPSQSQQRYQPQQDMSQEGYGTRSQPPLA- 600
           SG  Q   +PY+     PP  PP  Q     P Q +  ++P   ++  GY    +PP + 
Sbjct: 149 SGLSQGPARPYHP----PPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSR 204

Query: 601 -----PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQS 655
                PG P            P   P  +G +   P        +A S  G     G Q 
Sbjct: 205 MFQAPPGAP---------PPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNG--GKQH 253

Query: 656 NPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPG--SQMPPQPP-- 711
            P  +P S  +S       G P   P  +PVG     S P  PA+ P     +PP P   
Sbjct: 254 PPPTTPISVSSS----GASGAPPTKPPTTPVGGGNLPSAP-PPANFPHVTPNLPPPPALR 308

Query: 712 GSQSESSSHPALSQSPMPQER-----------GFMAGTQRNPQMAQYGPQQTGPSMSPHP 760
              + S+S P L   P+P              G   G ++ P +A   P    P+ S  P
Sbjct: 309 PLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAP-SPHSLPPASSSAP 367

Query: 761 SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISA 820
           +P  +     SS   + +S +     S   P       PA   +PS  +S P P     +
Sbjct: 368 APPMRFPYSSSSSSSAAASSSSSSSSSSASPF------PASQALPSYPHSFPPPTSLSVS 421

Query: 821 NNQMHGQGPSQPCGAV---------PLGRM-PSAGMQNRPFPGNMSSMTPSSPGMSQQGG 870
           N       PS P  AV         P GR+  ++     PFP +  + + + P +S    
Sbjct: 422 NQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHH 481

Query: 871 PGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSS 930
                      ++ Q+      Q   NS     G+FP                P+   SS
Sbjct: 482 HHQQQQQQQQQQQQQQQQQ--QQHHGNSGPPPPGAFP---------------HPLEGGSS 524

Query: 931 LMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQ--PESKSKK 988
                A PY+M+P        S+G      PG + LP P       +  P   P S S  
Sbjct: 525 ---HHAHPYAMSP--------SLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSN 573

Query: 989 SSSSTTTG 996
           SSSST+ G
Sbjct: 574 SSSSTSQG 581



 Score = 77.8 bits (190), Expect = 1e-13
 Identities = 158/681 (23%), Positives = 204/681 (29%), Gaps = 125/681 (18%)

Query: 106 DSAAG---GQADPPGPPLLSKPGDED-DAPPKMGEPAGGRYEHPGLGALGTQQP------ 155
           DS++G   G A P  PP L  P  +  D+ P+  +P      HP +   G   P      
Sbjct: 146 DSSSGLSQGPARPYHPPPLFPPSPQPPDSTPR--QPEASFEPHPSVTPTGYHAPMEPPTS 203

Query: 156 -------------PVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQS 202
                        P   PGG GG  + P      G AA + GGP G         G Q  
Sbjct: 204 RMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNG---------GKQHP 254

Query: 203 PGMGMMHSASAAAAGAPGSMDPLQ-----NSHEGYPNSQCNHY-PGYSRPGAGGGGGGGG 256
           P    +  +S+ A+GAP +  P       N     P +   H  P    P A        
Sbjct: 255 PPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNN-- 312

Query: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG-GSSAGYGVLSSPRQ 315
                         A A   G GA        +  A G G GG   G   G  +  SP  
Sbjct: 313 --------------ASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHS 358

Query: 316 QGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATP-TLNQLLTS-----PS 369
                   P        S +++ SAA      +  +   S A+P   +Q L S     P 
Sbjct: 359 LPPASSSAPAPPMRFPYSSSSSSSAAAS----SSSSSSSSSASPFPASQALPSYPHSFPP 414

Query: 370 PMMRSYGGSYPEYSSPSAPP-------PPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMG 422
           P   S     P+Y+ PS P        PPP  P  +  A   A  G             G
Sbjct: 415 PTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGP-------FPPSTG 467

Query: 423 AQYAAASPAWA-----AAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNP 477
           AQ  A  P          QQ+                    P  P     P L G GS+ 
Sbjct: 468 AQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHP-LEG-GSSH 525

Query: 478 HSQPQQSSPYPGGSYG-PPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMP 536
           H+ P   SP  G     PPGP           P   + + Y Q   +G           P
Sbjct: 526 HAHPYAMSPSLGSLRPYPPGP--------AHLPPPHSQVSYSQAGPNG-----------P 566

Query: 537 PQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQY---------LPSQSQQRYQPQQDMS 587
           P       S    QG  P     P P   P  A Y           S +          S
Sbjct: 567 PVSSSSNSSSSTSQGSYP--CSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASS 624

Query: 588 QEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGS 647
             GY T S P   P           +   P       GS     TGT          +G 
Sbjct: 625 PAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKP--GSPPSFRTGTPPGYRGTSPPAGP 682

Query: 648 TSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMP 707
            + +         P  P     L S+P  P+    G P+ + Q +  P      P S +P
Sbjct: 683 GTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVP 742

Query: 708 ----PQPPGSQSESSSHPALS 724
               P PP    +  SH + S
Sbjct: 743 PARSPSPPPKVVDVPSHASQS 763



 Score = 77.8 bits (190), Expect = 1e-13
 Identities = 138/623 (22%), Positives = 200/623 (32%), Gaps = 126/623 (20%)

Query: 251 GGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVL 310
           GG GG   G   G  GGG  +  GG   G          + +  G  G            
Sbjct: 222 GGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASG------------ 269

Query: 311 SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSP 370
                              A  +K       GG                    L ++P P
Sbjct: 270 -------------------APPTKPPTTPVGGG-------------------NLPSAPPP 291

Query: 371 MMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASP 430
                  ++P + +P+ PPPP  +P + A+A+    G Q     +     MG       P
Sbjct: 292 ------ANFP-HVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP 344

Query: 431 AWAAAQQRSHPAMSPGTPGPTMGRSQGSPMD-PMVMKRPQLYGMGSNPHSQPQQSSPYPG 489
                ++    A SP +  P    +   PM  P            S+  S    +SP+P 
Sbjct: 345 ---GPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPA 401

Query: 490 GSYGPPGPQRYP----IGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVS 545
               P  P  +P    + +  + P      +Y Q      A W +     PP YG+   +
Sbjct: 402 SQALPSYPHSFPPPTSLSVSNQPP------KYTQPSLPSQAVWSQG-PPPPPPYGRLLAN 454

Query: 546 GYCQQGQQPYYSQQPQPPHLPPQAQY----LPSQSQQRYQPQQDMSQEGYGTRSQPPLAP 601
                G  P  +      H P    +       Q QQ+ Q QQ   Q+ +G    PP  P
Sbjct: 455 SNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP--P 512

Query: 602 GK-PNHEDLNLIQQERPSSLPDLSGSIDDLPTG--------TEATLSSA-------VSAS 645
           G  P+  +        P ++    GS+   P G        ++ + S A        S+S
Sbjct: 513 GAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSS 572

Query: 646 GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISP-----AS 700
            S+SS    S P   P SP   P      G P P P   PV +  + S  +S      AS
Sbjct: 573 NSSSSTSQGSYPCSHP-SPSQGPQ-----GAPYPFP---PVPTVTTSSATLSTVIATVAS 623

Query: 701 IPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHP 760
            P       PPG        P+          G+  G   +P   + G        SP  
Sbjct: 624 SPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPG---SPPSFRTGTPPGYRGTSPPA 680

Query: 761 SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISA 820
            PG        +F+  + +   GP +   GP G  S PP     P+A  S  GP +  + 
Sbjct: 681 GPG--------TFKPGSPTVGPGP-LPPAGPSGLPSLPPP----PAAPAS--GPPLSATQ 725

Query: 821 NNQMHGQGPSQPCGAVPLGRMPS 843
             Q   +    P   VP  R PS
Sbjct: 726 IKQEPAEEYETPESPVPPARSPS 748



 Score = 70.9 bits (172), Expect = 1e-11
 Identities = 118/519 (22%), Positives = 173/519 (33%), Gaps = 112/519 (21%)

Query: 1104 PPPEVFSTGDTKKQPKLQPPS---PANSGSLQGP-----------QTPQSTGSNSMAEVP 1149
            PPP  F        P L PP    P N+ S   P            +P + G       P
Sbjct: 289  PPPANFP----HVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP 344

Query: 1150 GDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMP 1209
            G  K PT A +PH    P     +    +  P+S  S SS    +S + ++         
Sbjct: 345  GPEKGPTLAPSPHS--LPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSS-------- 394

Query: 1210 DVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQ 1269
                      +  PF   + +P     F     +  S+    Y Q    + +    G   
Sbjct: 395  ----------SASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPP 444

Query: 1270 QFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRH 1329
              PYG     R       +PG  PPS      G Q   +P    +  H           H
Sbjct: 445  PPPYG-----RLLANSNAHPGPFPPST-----GAQSTAHPPVSTHHHH-----------H 483

Query: 1330 EGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQM 1389
            +      Q   QQQ+   Q+ G+ SGP   P  G +P+P     ++G      H      
Sbjct: 484  QQQQQQQQQQQQQQQQQQQHHGN-SGP---PPPGAFPHP-----LEGGSSHHAH------ 528

Query: 1390 MGGPLQSSSSEGPQQNMWAARNDMPYPYQ----NRQGPGGPTQAPPYPGMNRTDDMMVPD 1445
               P   S S G  +        +P P+     ++ GP GP   P     N +       
Sbjct: 529  ---PYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGP---PVSSSSNSSSSTSQGS 582

Query: 1446 QRINHESQWPSHVSQRQPY--------MSSSASMQPI-----TRPPQPSYQTPPSLPNHI 1492
               +H S  PS   Q  PY         +SSA++  +     + P      +PP  P + 
Sbjct: 583  YPCSHPS--PSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYG 640

Query: 1493 SRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPT---------SQVTGPPPQPP- 1542
             RAPSP +++ +      P   P   +        T P          S   GP P PP 
Sbjct: 641  KRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPA 700

Query: 1543 -PIRREITFPPGSVEASQPVLK--QRRKITSKDIVTPEA 1578
             P       PP +  AS P L   Q ++  +++  TPE+
Sbjct: 701  GPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPES 739



 Score = 62.4 bits (150), Expect = 5e-09
 Identities = 73/279 (26%), Positives = 92/279 (32%), Gaps = 67/279 (24%)

Query: 13  TVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQ 72
           + G    A P    HHHHH                        QQQQQQQQQQQQQQQQQ
Sbjct: 465 STGAQSTAHPPVSTHHHHHQ-----------------------QQQQQQQQQQQQQQQQQ 501

Query: 73  QHPISNNNSLGGA------GGGAPQPGPDMEQPQHGGAKDSAAG-------------GQA 113
           QH  ++     GA      GG +    P    P  G  +    G              QA
Sbjct: 502 QHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQA 561

Query: 114 DPPGPPLLSKPGDEDDA---------PPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGG 164
            P GPP+ S                 P     P G  Y  P +  + T    ++      
Sbjct: 562 GPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTV---- 617

Query: 165 GPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
             A V      Y +A+P    P G+  P         SPG     +      G+P S   
Sbjct: 618 -IATVASSPAGYKTASPPGPPPYGKRAP---------SPGAYKTATPPGYKPGSPPSF-- 665

Query: 225 LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSG 263
              +  GY  +     PG  +PG+   G G     G SG
Sbjct: 666 RTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSG 704



 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 109/462 (23%), Positives = 156/462 (33%), Gaps = 100/462 (21%)

Query: 1107 EVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPAS-TPHGQM 1165
            E  ST    KQ + +  S + S     P+  ++       + P DL      S    G  
Sbjct: 60   EEASTPKVNKQGRSEEISESESEETNAPKKTKTEQELPRPQSPSDLDSLDGRSLNDDGSS 119

Query: 1166 TPM---QGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKD 1222
             P    Q  RS++ S++ P S  +DS      S  P  PY      P +    P  P+  
Sbjct: 120  DPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHP----PPLFPPSPQPPDST 175

Query: 1223 PFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQF--PYGASYDRR 1280
            P                  + P +S +   + +P+G  + +     + F  P GA     
Sbjct: 176  P------------------RQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAP---- 213

Query: 1281 HEPYGQQYPG------QGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGP-PAKRHEGDM 1333
              P+ Q YPG       GPP G  P GG                  + GP   K+H    
Sbjct: 214  -PPHPQLYPGGTGGVLSGPPMG--PKGGGA-------------ASSVGGPNGGKQHPPPT 257

Query: 1334 YNMQYSSQQQEMYNQYGGSYSGPDRRPIQG----QYPYPYSRERMQGPGQIQTHGIPPQM 1389
              +  SS         G   + P   P+ G      P P +   +       T  +PP  
Sbjct: 258  TPISVSSS-----GASGAPPTKPPTTPVGGGNLPSAPPPANFPHV-------TPNLPPPP 305

Query: 1390 MGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPG--------GPTQAP-PYPGMNRTDD 1440
               PL ++S+  P          +P P+   QG G        GPT AP P+     +  
Sbjct: 306  ALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSS 365

Query: 1441 MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1500
               P  R  + S   S  +      SSS+S  P      P+ Q  PS P+     P P S
Sbjct: 366  APAPPMRFPYSSSSSSSAAASSSSSSSSSSASPF-----PASQALPSYPHSF---PPPTS 417

Query: 1501 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPP 1542
               S+ N+      P LPS  +             GPPP PP
Sbjct: 418  L--SVSNQPPKYTQPSLPSQAVWS----------QGPPPPPP 447


>gi|55750041 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 98.2 bits (243), Expect = 8e-20
 Identities = 157/662 (23%), Positives = 216/662 (32%), Gaps = 132/662 (19%)

Query: 374 SYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWA 433
           S G + P Y  P   PP P  P S      A+     +    G    M    +    A  
Sbjct: 152 SQGPARP-YHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPP 210

Query: 434 AAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYG 493
            A    HP + PG  G   G   G PM P         G  +     P  ++P    S G
Sbjct: 211 GAPP-PHPQLYPGGTG---GVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSG 266

Query: 494 PPG-----PQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYC 548
             G     P   P+G  G  P A     +P    +           +PP    + ++   
Sbjct: 267 ASGAPPTKPPTTPVG-GGNLPSAPPPANFPHVTPN-----------LPPPPALRPLNN-- 312

Query: 549 QQGQQPYYSQQPQPPHLP-PQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHE 607
                P    QP P HLP P A              Q M     G    P LAP      
Sbjct: 313 ASASPPGLGAQPLPGHLPSPHAM------------GQGMGGLPPGPEKGPTLAPS----- 355

Query: 608 DLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFS---- 663
                    P SLP  S S    P     + SS+ SA+ S+SS    S+ +  P S    
Sbjct: 356 ---------PHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALP 406

Query: 664 --PHASPHLSSIP---------------------GGPSPSPVGSPVGSNQSRSGPISPAS 700
             PH+ P  +S+                      G P P P G  + ++ +  GP  P++
Sbjct: 407 SYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPST 466

Query: 701 IPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHP 760
             G+Q    PP     S+ H    Q    Q++      Q+       GP    P   PHP
Sbjct: 467 --GAQSTAHPP----VSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP--PGAFPHP 518

Query: 761 SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGP-GPGMGIS 819
             GG  H     +  S S G+  P      P G    PP +S V S S +GP GP +  S
Sbjct: 519 LEGGSSHHA-HPYAMSPSLGSLRPY-----PPGPAHLPPPHSQV-SYSQAGPNGPPVSSS 571

Query: 820 ANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPT 879
           +N+       S PC                         +  SP    QG P   PP+PT
Sbjct: 572 SNSSSSTSQGSYPC-------------------------SHPSPSQGPQGAPYPFPPVPT 606

Query: 880 VNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASS------------SPYSQPMNN 927
           V   +   +  +   A++ A  +  S PG    G  A S             P S P   
Sbjct: 607 VTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFR 666

Query: 928 SSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLP-LPLKADGKEEGTPQPESKS 986
           + +    +       P      + +VG   +   G S LP LP        G P   ++ 
Sbjct: 667 TGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQI 726

Query: 987 KK 988
           K+
Sbjct: 727 KQ 728



 Score = 86.3 bits (212), Expect = 3e-16
 Identities = 120/488 (24%), Positives = 171/488 (35%), Gaps = 91/488 (18%)

Query: 545 SGYCQQGQQPYYSQQPQPPHLPPQAQ---YLPSQSQQRYQPQQDMSQEGYGTRSQPPLA- 600
           SG  Q   +PY+     PP  PP  Q     P Q +  ++P   ++  GY    +PP + 
Sbjct: 149 SGLSQGPARPYHP----PPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSR 204

Query: 601 -----PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQS 655
                PG P            P   P  +G +   P        +A S  G     G Q 
Sbjct: 205 MFQAPPGAP---------PPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNG--GKQH 253

Query: 656 NPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPG--SQMPPQPP-- 711
            P  +P S  +S       G P   P  +PVG     S P  PA+ P     +PP P   
Sbjct: 254 PPPTTPISVSSS----GASGAPPTKPPTTPVGGGNLPSAP-PPANFPHVTPNLPPPPALR 308

Query: 712 GSQSESSSHPALSQSPMPQER-----------GFMAGTQRNPQMAQYGPQQTGPSMSPHP 760
              + S+S P L   P+P              G   G ++ P +A   P    P+ S  P
Sbjct: 309 PLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAP-SPHSLPPASSSAP 367

Query: 761 SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISA 820
           +P  +     SS   + +S +     S   P       PA   +PS  +S P P     +
Sbjct: 368 APPMRFPYSSSSSSSAAASSSSSSSSSSASPF------PASQALPSYPHSFPPPTSLSVS 421

Query: 821 NNQMHGQGPSQPCGAV---------PLGRM-PSAGMQNRPFPGNMSSMTPSSPGMSQQGG 870
           N       PS P  AV         P GR+  ++     PFP +  + + + P +S    
Sbjct: 422 NQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHH 481

Query: 871 PGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSS 930
                      ++ Q+      Q   NS     G+FP                P+   SS
Sbjct: 482 HHQQQQQQQQQQQQQQQQQ--QQHHGNSGPPPPGAFP---------------HPLEGGSS 524

Query: 931 LMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQ--PESKSKK 988
                A PY+M+P        S+G      PG + LP P       +  P   P S S  
Sbjct: 525 ---HHAHPYAMSP--------SLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSN 573

Query: 989 SSSSTTTG 996
           SSSST+ G
Sbjct: 574 SSSSTSQG 581



 Score = 77.8 bits (190), Expect = 1e-13
 Identities = 158/681 (23%), Positives = 204/681 (29%), Gaps = 125/681 (18%)

Query: 106 DSAAG---GQADPPGPPLLSKPGDED-DAPPKMGEPAGGRYEHPGLGALGTQQP------ 155
           DS++G   G A P  PP L  P  +  D+ P+  +P      HP +   G   P      
Sbjct: 146 DSSSGLSQGPARPYHPPPLFPPSPQPPDSTPR--QPEASFEPHPSVTPTGYHAPMEPPTS 203

Query: 156 -------------PVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQS 202
                        P   PGG GG  + P      G AA + GGP G         G Q  
Sbjct: 204 RMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNG---------GKQHP 254

Query: 203 PGMGMMHSASAAAAGAPGSMDPLQ-----NSHEGYPNSQCNHY-PGYSRPGAGGGGGGGG 256
           P    +  +S+ A+GAP +  P       N     P +   H  P    P A        
Sbjct: 255 PPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNN-- 312

Query: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG-GSSAGYGVLSSPRQ 315
                         A A   G GA        +  A G G GG   G   G  +  SP  
Sbjct: 313 --------------ASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHS 358

Query: 316 QGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATP-TLNQLLTS-----PS 369
                   P        S +++ SAA      +  +   S A+P   +Q L S     P 
Sbjct: 359 LPPASSSAPAPPMRFPYSSSSSSSAAAS----SSSSSSSSSASPFPASQALPSYPHSFPP 414

Query: 370 PMMRSYGGSYPEYSSPSAPP-------PPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMG 422
           P   S     P+Y+ PS P        PPP  P  +  A   A  G             G
Sbjct: 415 PTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGP-------FPPSTG 467

Query: 423 AQYAAASPAWA-----AAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNP 477
           AQ  A  P          QQ+                    P  P     P L G GS+ 
Sbjct: 468 AQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHP-LEG-GSSH 525

Query: 478 HSQPQQSSPYPGGSYG-PPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMP 536
           H+ P   SP  G     PPGP           P   + + Y Q   +G           P
Sbjct: 526 HAHPYAMSPSLGSLRPYPPGP--------AHLPPPHSQVSYSQAGPNG-----------P 566

Query: 537 PQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQY---------LPSQSQQRYQPQQDMS 587
           P       S    QG  P     P P   P  A Y           S +          S
Sbjct: 567 PVSSSSNSSSSTSQGSYP--CSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASS 624

Query: 588 QEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGS 647
             GY T S P   P           +   P       GS     TGT          +G 
Sbjct: 625 PAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKP--GSPPSFRTGTPPGYRGTSPPAGP 682

Query: 648 TSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMP 707
            + +         P  P     L S+P  P+    G P+ + Q +  P      P S +P
Sbjct: 683 GTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVP 742

Query: 708 ----PQPPGSQSESSSHPALS 724
               P PP    +  SH + S
Sbjct: 743 PARSPSPPPKVVDVPSHASQS 763



 Score = 77.8 bits (190), Expect = 1e-13
 Identities = 138/623 (22%), Positives = 200/623 (32%), Gaps = 126/623 (20%)

Query: 251 GGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVL 310
           GG GG   G   G  GGG  +  GG   G          + +  G  G            
Sbjct: 222 GGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASG------------ 269

Query: 311 SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSP 370
                              A  +K       GG                    L ++P P
Sbjct: 270 -------------------APPTKPPTTPVGGG-------------------NLPSAPPP 291

Query: 371 MMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASP 430
                  ++P + +P+ PPPP  +P + A+A+    G Q     +     MG       P
Sbjct: 292 ------ANFP-HVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP 344

Query: 431 AWAAAQQRSHPAMSPGTPGPTMGRSQGSPMD-PMVMKRPQLYGMGSNPHSQPQQSSPYPG 489
                ++    A SP +  P    +   PM  P            S+  S    +SP+P 
Sbjct: 345 ---GPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPA 401

Query: 490 GSYGPPGPQRYP----IGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVS 545
               P  P  +P    + +  + P      +Y Q      A W +     PP YG+   +
Sbjct: 402 SQALPSYPHSFPPPTSLSVSNQPP------KYTQPSLPSQAVWSQG-PPPPPPYGRLLAN 454

Query: 546 GYCQQGQQPYYSQQPQPPHLPPQAQY----LPSQSQQRYQPQQDMSQEGYGTRSQPPLAP 601
                G  P  +      H P    +       Q QQ+ Q QQ   Q+ +G    PP  P
Sbjct: 455 SNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP--P 512

Query: 602 GK-PNHEDLNLIQQERPSSLPDLSGSIDDLPTG--------TEATLSSA-------VSAS 645
           G  P+  +        P ++    GS+   P G        ++ + S A        S+S
Sbjct: 513 GAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSS 572

Query: 646 GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISP-----AS 700
            S+SS    S P   P SP   P      G P P P   PV +  + S  +S      AS
Sbjct: 573 NSSSSTSQGSYPCSHP-SPSQGPQ-----GAPYPFP---PVPTVTTSSATLSTVIATVAS 623

Query: 701 IPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHP 760
            P       PPG        P+          G+  G   +P   + G        SP  
Sbjct: 624 SPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPG---SPPSFRTGTPPGYRGTSPPA 680

Query: 761 SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISA 820
            PG        +F+  + +   GP +   GP G  S PP     P+A  S  GP +  + 
Sbjct: 681 GPG--------TFKPGSPTVGPGP-LPPAGPSGLPSLPPP----PAAPAS--GPPLSATQ 725

Query: 821 NNQMHGQGPSQPCGAVPLGRMPS 843
             Q   +    P   VP  R PS
Sbjct: 726 IKQEPAEEYETPESPVPPARSPS 748



 Score = 70.9 bits (172), Expect = 1e-11
 Identities = 118/519 (22%), Positives = 173/519 (33%), Gaps = 112/519 (21%)

Query: 1104 PPPEVFSTGDTKKQPKLQPPS---PANSGSLQGP-----------QTPQSTGSNSMAEVP 1149
            PPP  F        P L PP    P N+ S   P            +P + G       P
Sbjct: 289  PPPANFP----HVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP 344

Query: 1150 GDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMP 1209
            G  K PT A +PH    P     +    +  P+S  S SS    +S + ++         
Sbjct: 345  GPEKGPTLAPSPHS--LPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSS-------- 394

Query: 1210 DVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQ 1269
                      +  PF   + +P     F     +  S+    Y Q    + +    G   
Sbjct: 395  ----------SASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPP 444

Query: 1270 QFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRH 1329
              PYG     R       +PG  PPS      G Q   +P    +  H           H
Sbjct: 445  PPPYG-----RLLANSNAHPGPFPPST-----GAQSTAHPPVSTHHHH-----------H 483

Query: 1330 EGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQM 1389
            +      Q   QQQ+   Q+ G+ SGP   P  G +P+P     ++G      H      
Sbjct: 484  QQQQQQQQQQQQQQQQQQQHHGN-SGP---PPPGAFPHP-----LEGGSSHHAH------ 528

Query: 1390 MGGPLQSSSSEGPQQNMWAARNDMPYPYQ----NRQGPGGPTQAPPYPGMNRTDDMMVPD 1445
               P   S S G  +        +P P+     ++ GP GP   P     N +       
Sbjct: 529  ---PYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGP---PVSSSSNSSSSTSQGS 582

Query: 1446 QRINHESQWPSHVSQRQPY--------MSSSASMQPI-----TRPPQPSYQTPPSLPNHI 1492
               +H S  PS   Q  PY         +SSA++  +     + P      +PP  P + 
Sbjct: 583  YPCSHPS--PSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYG 640

Query: 1493 SRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPT---------SQVTGPPPQPP- 1542
             RAPSP +++ +      P   P   +        T P          S   GP P PP 
Sbjct: 641  KRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPA 700

Query: 1543 -PIRREITFPPGSVEASQPVLK--QRRKITSKDIVTPEA 1578
             P       PP +  AS P L   Q ++  +++  TPE+
Sbjct: 701  GPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPES 739



 Score = 62.4 bits (150), Expect = 5e-09
 Identities = 73/279 (26%), Positives = 92/279 (32%), Gaps = 67/279 (24%)

Query: 13  TVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQ 72
           + G    A P    HHHHH                        QQQQQQQQQQQQQQQQQ
Sbjct: 465 STGAQSTAHPPVSTHHHHHQ-----------------------QQQQQQQQQQQQQQQQQ 501

Query: 73  QHPISNNNSLGGA------GGGAPQPGPDMEQPQHGGAKDSAAG-------------GQA 113
           QH  ++     GA      GG +    P    P  G  +    G              QA
Sbjct: 502 QHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQA 561

Query: 114 DPPGPPLLSKPGDEDDA---------PPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGG 164
            P GPP+ S                 P     P G  Y  P +  + T    ++      
Sbjct: 562 GPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTV---- 617

Query: 165 GPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
             A V      Y +A+P    P G+  P         SPG     +      G+P S   
Sbjct: 618 -IATVASSPAGYKTASPPGPPPYGKRAP---------SPGAYKTATPPGYKPGSPPSF-- 665

Query: 225 LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSG 263
              +  GY  +     PG  +PG+   G G     G SG
Sbjct: 666 RTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSG 704



 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 109/462 (23%), Positives = 156/462 (33%), Gaps = 100/462 (21%)

Query: 1107 EVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPAS-TPHGQM 1165
            E  ST    KQ + +  S + S     P+  ++       + P DL      S    G  
Sbjct: 60   EEASTPKVNKQGRSEEISESESEETNAPKKTKTEQELPRPQSPSDLDSLDGRSLNDDGSS 119

Query: 1166 TPM---QGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKD 1222
             P    Q  RS++ S++ P S  +DS      S  P  PY      P +    P  P+  
Sbjct: 120  DPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHP----PPLFPPSPQPPDST 175

Query: 1223 PFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQF--PYGASYDRR 1280
            P                  + P +S +   + +P+G  + +     + F  P GA     
Sbjct: 176  P------------------RQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAP---- 213

Query: 1281 HEPYGQQYPG------QGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGP-PAKRHEGDM 1333
              P+ Q YPG       GPP G  P GG                  + GP   K+H    
Sbjct: 214  -PPHPQLYPGGTGGVLSGPPMG--PKGGGA-------------ASSVGGPNGGKQHPPPT 257

Query: 1334 YNMQYSSQQQEMYNQYGGSYSGPDRRPIQG----QYPYPYSRERMQGPGQIQTHGIPPQM 1389
              +  SS         G   + P   P+ G      P P +   +       T  +PP  
Sbjct: 258  TPISVSSS-----GASGAPPTKPPTTPVGGGNLPSAPPPANFPHV-------TPNLPPPP 305

Query: 1390 MGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPG--------GPTQAP-PYPGMNRTDD 1440
               PL ++S+  P          +P P+   QG G        GPT AP P+     +  
Sbjct: 306  ALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSS 365

Query: 1441 MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1500
               P  R  + S   S  +      SSS+S  P      P+ Q  PS P+     P P S
Sbjct: 366  APAPPMRFPYSSSSSSSAAASSSSSSSSSSASPF-----PASQALPSYPHSF---PPPTS 417

Query: 1501 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPP 1542
               S+ N+      P LPS  +             GPPP PP
Sbjct: 418  L--SVSNQPPKYTQPSLPSQAVWS----------QGPPPPPP 447


>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
          Length = 1604

 Score = 96.7 bits (239), Expect = 2e-19
 Identities = 237/1002 (23%), Positives = 306/1002 (30%), Gaps = 202/1002 (20%)

Query: 93   GPDMEQPQHGGAKDSAAGGQADPPGPP------LLSKPGDEDDAPPKMGEPAGGRYEHPG 146
            GP  ++   G        G+  PPG P      L   PGD    P   G+   G    PG
Sbjct: 429  GPKGQKGDPGFVGPEGLAGEPGPPGLPGPPGIGLPGTPGDPGGPPGPKGDK--GSSGIPG 486

Query: 147  LGALGTQQPPVAVPGGGGGPAAV----PE-FNNYY------------GSAAPASGGPG-- 187
                G +     V G  G P  V    PE F N+             G   PA G PG  
Sbjct: 487  KEGPGGKPGKPGVKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGDPVPARGDPGIQ 546

Query: 188  ---GRAG-PCFD-------QH--------GGQQSPGMGMM----------------HSAS 212
               G  G PC         QH        G   SPG G+                 +   
Sbjct: 547  GIKGEKGEPCLSCSSVVGAQHLVSSTGASGDVGSPGFGLPGLPGRAGVPGLKGEKGNFGE 606

Query: 213  AAAAGAPGSMDPLQNSH-EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGA 271
            A  AG+PG   P+  +  +G     C   P  S    G        G  G  G  G  G 
Sbjct: 607  AGPAGSPGPPGPVGPAGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEPGPPGF 666

Query: 272  GAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAA- 330
            G  G    A           AG  G  G  G++   G+   P  QG     G  G G   
Sbjct: 667  GLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGDGCTA 726

Query: 331  --SLSKAAAGSAAGGFQRFAGQNQHPSG----------------ATPTLNQLLTSPSPMM 372
              SL       A    Q      Q P G                  P L  +   P P  
Sbjct: 727  CPSLQGTVTDMAGRPGQPGPKGEQGPEGVGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPG 786

Query: 373  RSYGGSYPEYSSPS-----------APPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDM 421
            R   G   E  +P             PP P  +  +Q +     A G     G  +    
Sbjct: 787  RGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPP 846

Query: 422  GAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQP 481
            G                  P    G PG     SQG  +   +   P L+ MGS+    P
Sbjct: 847  GRDGQQGQTGLRGTPGEKGPRGEKGEPGECSCPSQGDLIFSGMPGAPGLW-MGSSWQPGP 905

Query: 482  QQSSPYPGGSYGPPGPQRYPIGIQG--------RTPGAMAGM------QYPQQQDSGDAT 527
            Q     P G  GPPGP   P G+QG          PG  A +      Q+  +   GD  
Sbjct: 906  QG----PPGIPGPPGPPGVP-GLQGVPGNNGLPGQPGLTAELGSLPIEQHLLKSICGDCV 960

Query: 528  WKET----FWLMPPQYGQQGVSGY-----CQQG----QQPYYSQQ--------------- 559
              +     + +   + G QG+ G      C Q     ++P   +                
Sbjct: 961  QGQRAHPGYLVEKGEKGDQGIPGVPGLDNCAQCFLSLERPRAEEARGDNSEGDPGCVGSP 1020

Query: 560  --PQPPHLPPQ-AQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQER 616
              P PP LP Q  +  P   +    P   +   G+      P  PG      L  +  ++
Sbjct: 1021 GLPGPPGLPGQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQGERGLTGLTGDK 1080

Query: 617  ----PSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSS 672
                P   P   G+    P G    L       G T S G++  P      P  S  L  
Sbjct: 1081 GEPGPPGQPGYPGATG--PPG----LPGIKGERGYTGSAGEKGEP-----GPPGSEGLPG 1129

Query: 673  IPGGPSPSPVGSPVGSNQSRS-----------GPISPASIPGSQMPPQPPGSQSESSSHP 721
             PG   P     P G++  +            GP  P   PG    P PPG Q+E  S  
Sbjct: 1130 PPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKVGSPGPPGPQAEKGSEG 1189

Query: 722  ALSQSPMPQERG--FMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMH-AGISSFQ-QSN 777
                S +P   G     G Q    +     +   P +   P P G     G   F+ ++ 
Sbjct: 1190 IRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTG 1249

Query: 778  SSGTYGPQ--MSQYGPQGNYSRPPAYSGVPSA--SYSGPGPGMGISANNQMHGQGPSQPC 833
              G  GP+    + GP G+  RP A  G P A      PGP   +         GP+   
Sbjct: 1250 HPGLPGPKGDCGKPGPPGSTGRPGA-EGEPGAMGPQGRPGPPGHVGPPGPPGQPGPA-GI 1307

Query: 834  GAVPL-------GRMPSAGMQNRPFPGNMSSMTPSSPG----MSQQGGPG----MGPPMP 878
             AV L       G    AG+  +P P       P  PG      ++G PG     GPP P
Sbjct: 1308 SAVGLKGDRGATGERGLAGLPGQPGPPGHPG-PPGEPGTDGAAGKEGPPGKQGFYGPPGP 1366

Query: 879  TVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSP 920
                K    AA   Q      + R G   G  +SG M    P
Sbjct: 1367 ----KGDPGAAG--QKGQAGEKGRAGMPGGPGKSGSMGPVGP 1402



 Score = 72.0 bits (175), Expect = 6e-12
 Identities = 124/479 (25%), Positives = 142/479 (29%), Gaps = 76/479 (15%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLL-------------SKPGDEDD- 129
            G  G    PGP  E+   G    S   G   PPGPP +              KPG   D 
Sbjct: 1171 GKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDP 1230

Query: 130  ---APPKMGEPAG--GRYEHPGL-GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPAS 183
                PP +  P G  G+  HPGL G  G    P   PG  G P A  E         P +
Sbjct: 1231 GPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKP-GPPGSTGRPGAEGE---------PGA 1280

Query: 184  GGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPL-QNSHEGYPNSQCNHYPG 242
             GP GR GP    H G   P  G    A  +A G  G      +    G P       PG
Sbjct: 1281 MGPQGRPGP--PGHVGPPGP-PGQPGPAGISAVGLKGDRGATGERGLAGLPGQP--GPPG 1335

Query: 243  YSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGG 302
            +  P    G  G  G  G  G  G  G  G  G    A     A     AG  GG G  G
Sbjct: 1336 HPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSG 1395

Query: 303  SSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAG--GFQRFAGQNQHPSGATPT 360
            S    G      ++G     GP G         + G        +RF  Q          
Sbjct: 1396 SMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQEIIKMFDERM 1455

Query: 361  LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM----- 415
                     PM  +     P        P  P  P S          G+Q   G+     
Sbjct: 1456 AYYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGVRGLPG 1515

Query: 416  --GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGM 473
              G   D+G   A  +               PG PGP     QG P           YG 
Sbjct: 1516 TKGEKGDIGIGIAGENGL-------------PGPPGP-----QGPPG----------YGK 1547

Query: 474  GSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETF 532
                    QQ  P   G  GPPGP   P       P    G    +QQ     T K  F
Sbjct: 1548 MGATGPMGQQGIP---GIPGPPGPMGQPGKAGHCNPSDCFGAMPMEQQYPPMKTMKGPF 1603



 Score = 68.9 bits (167), Expect = 5e-11
 Identities = 180/807 (22%), Positives = 226/807 (28%), Gaps = 179/807 (22%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPG--------------DEDD 129
            G  G    PGP  E+   G      A G   PPG  +   PG               E  
Sbjct: 806  GLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRDGQQGQTGLRGTPGEKG 865

Query: 130  APPKMGEPA------------GGRYEHPGLGALGTQQP-PVAVPG--GGGGPAAVPEFNN 174
               + GEP              G    PGL    + QP P   PG  G  GP  VP    
Sbjct: 866  PRGEKGEPGECSCPSQGDLIFSGMPGAPGLWMGSSWQPGPQGPPGIPGPPGPPGVPGLQG 925

Query: 175  YYG-SAAPASGG-----------------------PGGRAGPCF----DQHGGQQSPGM- 205
              G +  P   G                        G RA P +     + G Q  PG+ 
Sbjct: 926  VPGNNGLPGQPGLTAELGSLPIEQHLLKSICGDCVQGQRAHPGYLVEKGEKGDQGIPGVP 985

Query: 206  ---------------------GMMHSASAAAAGAPGSMDPL----QNSHEGYPNSQCNHY 240
                                 G          G+PG   P     Q   EG P  + +  
Sbjct: 986  GLDNCAQCFLSLERPRAEEARGDNSEGDPGCVGSPGLPGPPGLPGQRGEEGPPGMRGSPG 1045

Query: 241  P--GYSRPGAGGGGGGGG--GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG 296
            P      PG  G  G  G  G  G  G  G  G  G  G         A       G  G
Sbjct: 1046 PPGPIGPPGFPGAVGSPGLPGLQGERGLTGLTGDKGEPGPPGQPGYPGATGPPGLPGIKG 1105

Query: 297  GGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPS- 355
              GY GS+   G    P  +  G+   PG  G          S   G Q F GQ   P  
Sbjct: 1106 ERGYTGSAGEKGEPGPPGSE--GLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGP 1163

Query: 356  GATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM 415
               P     + SP P              PS  P  P  P        A   G     G 
Sbjct: 1164 PGPPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDGK 1223

Query: 416  -GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMG 474
             GL  D G    A  P              PG PGP      G P  P    RP   G  
Sbjct: 1224 PGLRGDPG---PAGPPGLMGPPGFKGKTGHPGLPGPK--GDCGKPGPPGSTGRP---GAE 1275

Query: 475  SNPHSQPQQSSPYPGGSYGPPGPQRYP-------IGIQG--------------RTPGAMA 513
              P +   Q  P P G  GPPGP   P       +G++G                PG   
Sbjct: 1276 GEPGAMGPQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATGERGLAGLPGQPGPPG 1335

Query: 514  GMQYPQQQDSGDATWKE------TFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPP 567
                P +  +  A  KE       F+  P   G  G +G   Q  +   +  P  P    
Sbjct: 1336 HPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPG--- 1392

Query: 568  QAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKP----------NHEDLNLIQQERP 617
                  S S     P     + G+     P  +PG P          N++++    ++  
Sbjct: 1393 -----KSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQEI 1447

Query: 618  SSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSP-----------HA 666
              + D   +           +++A    G     G    P  +P SP             
Sbjct: 1448 IKMFDERMAYYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPG-APGSPGLPGQIGREGRQG 1506

Query: 667  SPHLSSIPG-------------------GPSPSPVGSPVGSNQSRSGPISPASIPGSQMP 707
             P +  +PG                   GP P P G P       +GP+    IPG   P
Sbjct: 1507 LPGVRGLPGTKGEKGDIGIGIAGENGLPGP-PGPQGPPGYGKMGATGPMGQQGIPGIPGP 1565

Query: 708  PQP---PGSQSESSSHPALSQSPMPQE 731
            P P   PG     +        PM Q+
Sbjct: 1566 PGPMGQPGKAGHCNPSDCFGAMPMEQQ 1592



 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 178/785 (22%), Positives = 246/785 (31%), Gaps = 136/785 (17%)

Query: 246  PGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSA 305
            P    G  G  G  G  G GG  G  G  G                 G  G  G  G + 
Sbjct: 388  PSGLPGSTGEKGQKGEKGDGGIKGVPGKPGRDGRPGEICVIGPKGQKGDPGFVGPEGLAG 447

Query: 306  GYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA----------GGFQRFAGQNQHPS 355
              G    P   G G+   PG  G     K   GS+            G     G+   P 
Sbjct: 448  EPGPPGLPGPPGIGLPGTPGDPGGPPGPKGDKGSSGIPGKEGPGGKPGKPGVKGEKGDPC 507

Query: 356  GATPTLNQLLTSPSPMMRSYG--GSYPEYSSPSAPPPPPSQPQSQ---------AAAAGA 404
               PTL      P       G  G       P  P P    P  Q           +  +
Sbjct: 508  EVCPTL------PEGFQNFVGLPGKPGPKGEPGDPVPARGDPGIQGIKGEKGEPCLSCSS 561

Query: 405  AAGGQQAAAGMGLGKDMGA--------QYAAASPAWAAAQ---QRSHPAMSPGTPGPT-- 451
              G Q   +  G   D+G+           A  P     +     + PA SPG PGP   
Sbjct: 562  VVGAQHLVSSTGASGDVGSPGFGLPGLPGRAGVPGLKGEKGNFGEAGPAGSPGPPGPVGP 621

Query: 452  --MGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTP 509
              +  ++G P +P     P L  +          + P P G  G PGP  +  G+ G+  
Sbjct: 622  AGIKGAKGEPCEPC----PALSNLQDG--DVRVVALPGPSGEKGEPGPPGF--GLPGKQG 673

Query: 510  GAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGY-CQQGQQPYYSQQPQPPHLPPQ 568
             A       Q+ D+G+     T    P   G+ G+SG    QG      ++       P 
Sbjct: 674  KAGERGLKGQKGDAGNPGDPGT----PGTTGRPGLSGEPGVQGPAGPKGEKGDGCTACPS 729

Query: 569  AQYLPSQSQQR---YQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSG 625
             Q   +    R     P+ +   EG G        PGKP               LP + G
Sbjct: 730  LQGTVTDMAGRPGQPGPKGEQGPEGVG-------RPGKPGQ-----------PGLPGVQG 771

Query: 626  SIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSP 685
                 P G +          G     G      Q P     +P L  I G P P     P
Sbjct: 772  -----PPGLK----------GVQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGP 816

Query: 686  VGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMA 745
             G   ++  P     + G+  P  PPG+          S S  P   G    T       
Sbjct: 817  TGEKGAQGSP----GVKGATGPVGPPGA----------SVSGPPGRDGQQGQTGLRGTPG 862

Query: 746  QYGP--QQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSG 803
            + GP  ++  P     PS G  + +G+       + G +     Q GPQG    PP   G
Sbjct: 863  EKGPRGEKGEPGECSCPSQGDLIFSGM-----PGAPGLWMGSSWQPGPQG----PPGIPG 913

Query: 804  VPSASYSGPG-PGM-GISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPS 861
             P      PG PG+ G+  NN +    P QP     LG +P      +   G+      +
Sbjct: 914  PPGP----PGVPGLQGVPGNNGL----PGQPGLTAELGSLPIEQHLLKSICGDCVQGQRA 965

Query: 862  SPG----MSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPG-MNQSGLMA 916
             PG      ++G  G+ P +P ++  AQ   +     A  +        PG +   GL  
Sbjct: 966  HPGYLVEKGEKGDQGI-PGVPGLDNCAQCFLSLERPRAEEARGDNSEGDPGCVGSPGLPG 1024

Query: 917  SSS-PYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGK 975
                P  +       +  +  PP  + P     +  S GL  +   GE  L   L  D  
Sbjct: 1025 PPGLPGQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQ--GERGL-TGLTGDKG 1081

Query: 976  EEGTP 980
            E G P
Sbjct: 1082 EPGPP 1086



 Score = 44.3 bits (103), Expect = 0.001
 Identities = 58/196 (29%), Positives = 67/196 (34%), Gaps = 41/196 (20%)

Query: 82   LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-LLSKPGDEDDAPPKMGEPAG- 139
            L G  G   +PGP     + G   +  A G    PGPP  +  PG     PP    PAG 
Sbjct: 1253 LPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGPPG-----PPGQPGPAGI 1307

Query: 140  ---------GRYEHPGLGALGTQQPPVAVPG--------GGGGPAAVPEFNNYYGSAAPA 182
                     G     GL  L  Q  P   PG        G  G    P    +YG   P 
Sbjct: 1308 SAVGLKGDRGATGERGLAGLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGP- 1366

Query: 183  SGGPG-----GRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQC 237
             G PG     G+AG    + G    PG G   S S    G PG     +  H G P    
Sbjct: 1367 KGDPGAAGQKGQAG----EKGRAGMPG-GPGKSGSMGPVGPPGPAG--ERGHPGAPGPSG 1419

Query: 238  NHYPGYSRPGAGGGGG 253
            +  PG   PG  G  G
Sbjct: 1420 S--PGL--PGVPGSMG 1431



 Score = 33.9 bits (76), Expect = 1.8
 Identities = 77/327 (23%), Positives = 109/327 (33%), Gaps = 66/327 (20%)

Query: 1123 PSPANSGSLQGPQ-TPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDP 1181
            P P   G +QGPQ  P + G   +  +PG   PP P      Q +P  G + +T  V  P
Sbjct: 782  PGPPGRG-VQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSP--GVKGATGPVGPP 838

Query: 1182 FSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQG 1241
             + VS           P    QQG +                  G+R  PG   P   +G
Sbjct: 839  GASVSG---------PPGRDGQQGQT------------------GLRGTPGEKGPRGEKG 871

Query: 1242 QMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYG 1301
            +    S     +   SG     G+        G+S+    +P  Q  PG   P G P   
Sbjct: 872  EPGECSCPSQGDLIFSGMPGAPGLWM------GSSW----QPGPQGPPGIPGPPGPPGVP 921

Query: 1302 GHQ--PGL--YPQQPNYKRHMDGMYGPPAKRH----------EGDMYNMQYSSQQQEMYN 1347
            G Q  PG    P QP     +  +   P ++H          +G   +  Y  ++ E  +
Sbjct: 922  GLQGVPGNNGLPGQPGLTAELGSL---PIEQHLLKSICGDCVQGQRAHPGYLVEKGEKGD 978

Query: 1348 QYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMW 1407
            Q      G D      Q      R R +      + G P     G + S    GP     
Sbjct: 979  QGIPGVPGLDN---CAQCFLSLERPRAEEARGDNSEGDP-----GCVGSPGLPGPPGLPG 1030

Query: 1408 AARNDMPYPYQNRQGPGGPTQAPPYPG 1434
                + P   +   GP GP   P +PG
Sbjct: 1031 QRGEEGPPGMRGSPGPPGPIGPPGFPG 1057


>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
          Length = 1626

 Score = 95.1 bits (235), Expect = 7e-19
 Identities = 245/986 (24%), Positives = 313/986 (31%), Gaps = 168/986 (17%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAG----GQADPPGPPLLSKP-GDED-DAPPKMGEP 137
            G  G A  PG      Q  G K         G    PGPP    P G E  D PP +   
Sbjct: 635  GDVGPAGPPGVPGSVVQQEGLKGEQGAPGPRGHQGAPGPPGARGPIGPEGRDGPPGLQGL 694

Query: 138  AG--GRYEHPGL-GALGTQQPP-----VAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGR 189
             G  G    PG+ G LG Q PP        PG GG P    E         P   GP G+
Sbjct: 695  RGKKGDMGPPGIPGLLGLQGPPGPPGVPGPPGPGGSPGLPGEIGFPGKPGPPGPTGPPGK 754

Query: 190  AGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMD-------------PLQNSHEGYPNSQ 236
             GP      G   P             G PG                P +    G P + 
Sbjct: 755  DGP-----NGPPGPPGTKGEPGERGEDGLPGKPGLRGEIGEQGLAGRPGEKGEAGLPGA- 808

Query: 237  CNHYPGYSRPGAGGGGGGGGGGG--GGSGGGGGGGGAG-AGGAGAGAVAAAAAAAAAAAG 293
                PG+  PG  G  G  G  G  G  G  G  G  G AG AG   +    +       
Sbjct: 809  ----PGF--PGVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPR 862

Query: 294  GGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQH 353
              G  G  G     G+   P  QG    +GP G      +K   G  A G    AG    
Sbjct: 863  MPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPPGAKGQEG--AHGAPGAAGNPGA 920

Query: 354  PSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAA 413
            P                        +     PS PP     P  +         G++ AA
Sbjct: 921  P-----------------------GHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAA 957

Query: 414  G----MGLGKDMGAQYAAASPAWAAAQQRSHPAM--SPGTPGP-----TMGRSQGS---P 459
            G     G     G   A   P      +   P +  SPG PGP       G+ +GS    
Sbjct: 958  GEEGSPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLPGPLGTKAACGKVRGSENCA 1017

Query: 460  MDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGA--MAGMQY 517
            +    +K  +  G    P S   +  P  G + GPPGP   P G +G +PG+  + G   
Sbjct: 1018 LGGQCVKGDR--GAPGIPGSPGSRGDPGIGVA-GPPGPSG-PPGDKG-SPGSRGLPGFPG 1072

Query: 518  PQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQ------PQPPHLPPQAQY 571
            PQ     D          PP  G+ G+S     G     ++       P PP LP     
Sbjct: 1073 PQGPAGRDGAPGNPGERGPP--GKPGLSSLLSPGDINLLAKDVCNDCPPGPPGLPG---- 1126

Query: 572  LPSQSQQRYQPQQDMSQ--EGYGTRSQPPLAPGKPNHEDLNLIQQER----------PSS 619
            LP     +  P +   +  EG    + PP  PG P        Q ER             
Sbjct: 1127 LPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQG 1186

Query: 620  LPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPA-QSPFSPHASPHLSSIPG--- 675
             P + G +   P G       A   +G+    G Q +P  + P  P     L  IPG   
Sbjct: 1187 HPGVPGFMG--PPGNPGP-PGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEG 1243

Query: 676  ----GPSPSPVGSPVGSNQ----SRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSP 727
                   P P G P  + +       G   P    G       PG + ES +     Q  
Sbjct: 1244 KEGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEG 1303

Query: 728  MPQERGFMAGT-QRNPQMAQYGPQQTGPSMSP-HPSPGGQMHAGISSFQQSNSSGTYG-P 784
            +P + G    T  + PQ  +  P + G   SP  P P G       +  Q  S G  G P
Sbjct: 1304 LPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSG-------TPGQKGSKGENGSP 1356

Query: 785  QMSQY-GPQGNYSRP-----PAYSGVP----SASYSGPGPGMGISANNQMHGQGPSQPCG 834
             +  + GP+G    P     P   GVP       + G     GI  +    G G  QP  
Sbjct: 1357 GLPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPG-GKGQPGD 1415

Query: 835  AVPLGRMPSAGMQN-RPFPGNMSSMTPSSPGMSQQGGPGM---GPPMPTVNRKAQE---- 886
                G     G+   +  PG    + P  P   Q G PG+    P M T+ R  QE    
Sbjct: 1416 PGIPGHKGHTGLMGPQGLPGENGPVGPPGP-PGQPGFPGLRGESPSMETLRRLIQEELGK 1474

Query: 887  --------AAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQP-MNNSSSLMNTQAP 937
                      A +  A   S+Q R G      + GL   + P  +P       L     P
Sbjct: 1475 QLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGP 1534

Query: 938  --PYSMAPAMVNSSAASVGLADMMSP 961
              P     A  +  A  VGL   M P
Sbjct: 1535 IGPKGERGAKGDPGAPGVGLRGEMGP 1560



 Score = 80.1 bits (196), Expect = 2e-14
 Identities = 155/664 (23%), Positives = 202/664 (30%), Gaps = 149/664 (22%)

Query: 84   GAGGGAPQPG----PDMEQPQHGGAKDSAAG--GQADPPGPPLLSK---PGDED------ 128
            G  G    PG    P    PQ    +D A G  G+  PPG P LS    PGD +      
Sbjct: 1054 GPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSLLSPGDINLLAKDV 1113

Query: 129  --DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGP 186
              D PP            PGL  L   +    VPG  G      +      +  P   GP
Sbjct: 1114 CNDCPPGP----------PGLPGLPGFKGDKGVPGKPGREGTEGKKGE---AGPPGLPGP 1160

Query: 187  GGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRP 246
             G AGP                   S    GA G +   Q   +G+P       PG+  P
Sbjct: 1161 PGIAGP-----------------QGSQGERGADGEVG--QKGDQGHPG-----VPGFMGP 1196

Query: 247  GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG 306
                G  G  G  G +G  G  G  G  G       +         G  G  G  G    
Sbjct: 1197 PGNPGPPGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGE 1256

Query: 307  YGVLSSPRQQGGGMMMGPGG-GGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
             G    P   G     GP G  G    S A       G     GQ   P     T     
Sbjct: 1257 PGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDGDT----- 1311

Query: 366  TSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM----GLGKDM 421
              P+      G   P+   P  PP     P S      +   GQ+ + G     GL   +
Sbjct: 1312 -GPT------GPQGPQ--GPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFL 1362

Query: 422  GAQYAAASPAWAAAQQRSHPAMSPGTPG-------PTMGRSQGSPMDPMVMKRPQLYGMG 474
            G +     P       +      PG PG       P +   +G P        P + G  
Sbjct: 1363 GPRGPPGEPGEKGVPGKEGVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQPGDPGIPGHK 1422

Query: 475  SNPHSQPQQSSPYPGGSYGPPGPQRYP--IGIQGRTPGAMAGMQYPQQQDSGDATWKETF 532
             +      Q  P   G  GPPGP   P   G++G +P +M  ++   Q++ G        
Sbjct: 1423 GHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESP-SMETLRRLIQEELGKQLETRLA 1481

Query: 533  WL---MPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQE 589
            +L   MPP Y +        QG+       P PP  P                     ++
Sbjct: 1482 YLLAQMPPAYMKSS------QGR-------PGPPGPP--------------------GKD 1508

Query: 590  GYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTS 649
            G   R+ P   PG+P    L     E PS                       +   G   
Sbjct: 1509 GLPGRAGPMGEPGRPGQGGL-----EGPSG---------------------PIGPKGERG 1542

Query: 650  SQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSP-VGSNQSRSGPISPASIPGSQMPP 708
            ++GD   P          P +   PG P  +  G P +   Q  +GP     +PG   PP
Sbjct: 1543 AKGDPGAPGVGLRGEMGPPGIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGLPG---PP 1599

Query: 709  QPPG 712
             PPG
Sbjct: 1600 GPPG 1603



 Score = 79.7 bits (195), Expect = 3e-14
 Identities = 205/871 (23%), Positives = 262/871 (30%), Gaps = 163/871 (18%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS-----------KPGD-----E 127
            G  G     G   E    G   D    G+A P GPP L             PG+     E
Sbjct: 813  GVRGEKGDQGEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGE 872

Query: 128  DDAPPKMGEPAGGRYEHPG-LGALGTQQPPVA--------VPGGGGGPAAVPEFNNYYGS 178
               P   GEP  G    PG LG  G   PP A         PG  G P A         S
Sbjct: 873  KGDPGLPGEP--GLQGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVGAPGPS 930

Query: 179  AAPAS-GGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQC 237
              P S G PG R  P  D   G++          +A   G+PG + P      G P +  
Sbjct: 931  GPPGSVGAPGLRGTPGKDGERGEKG---------AAGEEGSPGPVGP-----RGDPGA-- 974

Query: 238  NHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGG 297
               PG   PG  G G  G  G  GS G  G  G  A           A       G  G 
Sbjct: 975  ---PGL--PGPPGKGKDGEPGLRGSPGLPGPLGTKAACGKVRGSENCALGGQCVKGDRGA 1029

Query: 298  GGYGGSSA-----GYGVLSSPRQQGG-GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN 351
             G  GS       G GV   P   G  G    PG  G          +   G     G+ 
Sbjct: 1030 PGIPGSPGSRGDPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRDGAPGNPGER 1089

Query: 352  QHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQA 411
              P    P L+ LL SP  +         +      PP PP  P            G+  
Sbjct: 1090 GPPG--KPGLSSLL-SPGDI-----NLLAKDVCNDCPPGPPGLPGLPGFKGDKGVPGKPG 1141

Query: 412  AAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMS-------------PGTPGPTMGRSQGS 458
              G    K          P   A  Q S                  PG PG       G 
Sbjct: 1142 REGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQGHPGVPG-----FMGP 1196

Query: 459  PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYP 518
            P +P       + G    P  Q    SP   G  GPPGPQ  P G+ G     + G +  
Sbjct: 1197 PGNPGPPGADGIAGAAGPPGIQ---GSP---GKEGPPGPQG-PSGLPG-----IPGEEGK 1244

Query: 519  QQQDS-----GDATWKETFWLMPPQ--YGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQY 571
            + +D      G+        L  P+   G  G  G+      P    +     LP Q + 
Sbjct: 1245 EGRDGKPGPPGEPGKAGEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQ-EG 1303

Query: 572  LPSQSQQRYQ--PQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDD 629
            LP +        PQ      G   ++  P +PG+P            PS  P   GS  +
Sbjct: 1304 LPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPG-----------PSGTPGQKGSKGE 1352

Query: 630  LPTGTEATLSSAVSASGSTSSQGDQSNPAQS--PFSPHASPHLSSIPGGPS-------PS 680
                    L   +   G     G++  P +   P  P   P      G P        P 
Sbjct: 1353 ---NGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKP-GEPGFKGERGDPGIKGDKGPPG 1408

Query: 681  PVGSP----VGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSP--------M 728
              G P    +  ++  +G + P  +PG   P  PPG   +        +SP        +
Sbjct: 1409 GKGQPGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGPPGQPGFPGLRGESPSMETLRRLI 1468

Query: 729  PQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQ 788
             +E G    T+    +AQ  P     S      PG     G+                 +
Sbjct: 1469 QEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLP---------------GR 1513

Query: 789  YGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQN 848
             GP G   R P   G+        GP   I    +   +G     G    G M   G+  
Sbjct: 1514 AGPMGEPGR-PGQGGL-------EGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPG 1565

Query: 849  RP-FPGNMSSMTPSSPGMSQQGGPGMGPPMP 878
            +P  PG      P  PG   + GP   P +P
Sbjct: 1566 QPGEPGYAKDGLPGIPGPQGETGPAGHPGLP 1596



 Score = 58.5 bits (140), Expect = 7e-08
 Identities = 131/543 (24%), Positives = 162/543 (29%), Gaps = 89/543 (16%)

Query: 388 PPPPPSQPQSQAA-----------AAGAAAGGQQAAAG-MGLGKDMGAQYAAASPAWAAA 435
           PPPPP +P +  +           +  A   G+   AG MGL    G    A  P  A  
Sbjct: 453 PPPPPQRPPTPGSEQIGFLKTINCSCPAGEKGEMGVAGPMGLPGPKG-DIGAIGPVGAPG 511

Query: 436 QQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPP 495
            +     +  G  G      +GS   P    R    GM   P    +   P   G  GP 
Sbjct: 512 PKGEKGDVGIGPFGQGEKGEKGSLGLPGPPGRDGSKGMRGEPGELGEPGLPGEVGMRGPQ 571

Query: 496 GPQRYPIGIQGRT--PGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQ 553
           GP   P G  GR   PG          +        + F   P   GQQG  G       
Sbjct: 572 GPPGLP-GPPGRVGAPGLQGERGEKGTRGEKGERGLDGFPGKPGDTGQQGRPGPSGVAG- 629

Query: 554 PYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQ 613
           P   +    P  PP       Q +     Q      G+     PP A G    E      
Sbjct: 630 PQGEKGDVGPAGPPGVPGSVVQQEGLKGEQGAPGPRGHQGAPGPPGARGPIGPEG----- 684

Query: 614 QERPSSLPDLSGSIDDL-PTGTEATLSSAVSASGSTSSQGDQSNPA-QSPFSPHASPHLS 671
           ++ P  L  L G   D+ P G    L            QG    P    P  P  SP L 
Sbjct: 685 RDGPPGLQGLRGKKGDMGPPGIPGLLGL----------QGPPGPPGVPGPPGPGGSPGLP 734

Query: 672 S---IPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPM 728
                PG P P              GP  P    G   PP PPG++ E            
Sbjct: 735 GEIGFPGKPGPP-------------GPTGPPGKDGPNGPPGPPGTKGE------------ 769

Query: 729 PQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQ 788
           P ERG      +     + G Q           PG +  AG+         G  G +  Q
Sbjct: 770 PGERGEDGLPGKPGLRGEIGEQGLA------GRPGEKGEAGLPG--APGFPGVRGEKGDQ 821

Query: 789 YGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQN 848
            G +G    P           +GP    G+     +    P  P    P G     G+  
Sbjct: 822 -GEKGELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGL-- 878

Query: 849 RPFPGNMSSMTPSSPGMSQQGGPG-MGPPMPT--VNRKAQEAAAAVMQAAANSAQSRQGS 905
                      P  PG+  QG PG +GP  PT     K QE A     AA N        
Sbjct: 879 -----------PGEPGL--QGRPGELGPQGPTGPPGAKGQEGAHGAPGAAGNPGAPGHVG 925

Query: 906 FPG 908
            PG
Sbjct: 926 APG 928



 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 123/510 (24%), Positives = 158/510 (30%), Gaps = 80/510 (15%)

Query: 82   LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGR 141
            + G  G   + G D E  Q G        G   PPG P    PG +  A         G 
Sbjct: 1163 IAGPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPGNP--GPPGADGIA---------GA 1211

Query: 142  YEHPGL-GALGTQQPPVAVPGGGGGPAAVPEFNNYYG----SAAPASGGPGGRAG-PCFD 195
               PG+ G+ G + PP     G  GP+ +P      G       P   G  G+AG P   
Sbjct: 1212 AGPPGIQGSPGKEGPP-----GPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKAGEPGLP 1266

Query: 196  QHGGQQSPGMGMMHSASAAAAGAPGSMDPL-QNSHEGYPNSQCNHYP-GYSRPGAGGGGG 253
               G + P     H+  + A G  G    +     EG P    +  P G   P    G  
Sbjct: 1267 GPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQGPRGPP 1326

Query: 254  GGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSP 313
            G  G  G  G  G  G  G  G+     +          G  G  G  G     GV   P
Sbjct: 1327 GKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGVPGKP 1386

Query: 314  RQQG-GGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMM 372
             + G  G    PG  G         G    G     G   H           L  P  + 
Sbjct: 1387 GEPGFKGERGDPGIKGDKG---PPGGKGQPGDPGIPGHKGHTG---------LMGPQGL- 1433

Query: 373  RSYGGSYPEYSSPSAPPPPPSQP-----QSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAA 427
                   P  + P  PP PP QP     + ++ +        Q   G  L   +    A 
Sbjct: 1434 -------PGENGPVGPPGPPGQPGFPGLRGESPSMETLRRLIQEELGKQLETRLAYLLAQ 1486

Query: 428  ASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMG-----SNP----- 477
              PA+  + Q       PG PGP      G P     M  P   G G     S P     
Sbjct: 1487 MPPAYMKSSQG-----RPGPPGPP--GKDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKG 1539

Query: 478  --HSQPQQSSPYPG--GSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFW 533
               ++    +P  G  G  GPPG    P G  G     + G+  P Q ++G A       
Sbjct: 1540 ERGAKGDPGAPGVGLRGEMGPPGIPGQP-GEPGYAKDGLPGIPGP-QGETGPAG------ 1591

Query: 534  LMPPQYGQQGVSGYCQQGQQPYYSQQPQPP 563
              P   G  G  G C   Q  Y++     P
Sbjct: 1592 -HPGLPGPPGPPGQCDPSQCAYFASLAARP 1620



 Score = 39.7 bits (91), Expect = 0.033
 Identities = 51/193 (26%), Positives = 65/193 (33%), Gaps = 41/193 (21%)

Query: 56   QQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADP 115
            Q++  +Q + +      Q P +   S  G  G    PG D    + G   +    GQ   
Sbjct: 1469 QEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLPGRAGPMGEPGRPGQGGL 1528

Query: 116  PGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNY 175
             GP     P  E  A    G+P       PG+G  G   PP  +PG  G P        Y
Sbjct: 1529 EGPSGPIGPKGERGA---KGDPGA-----PGVGLRGEMGPP-GIPGQPGEP-------GY 1572

Query: 176  YGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNS 235
                 P   GP G  GP    H G   P             G PG  DP          S
Sbjct: 1573 AKDGLPGIPGPQGETGPA--GHPGLPGP------------PGPPGQCDP----------S 1608

Query: 236  QCNHYPGY-SRPG 247
            QC ++    +RPG
Sbjct: 1609 QCAYFASLAARPG 1621



 Score = 35.8 bits (81), Expect = 0.47
 Identities = 68/293 (23%), Positives = 87/293 (29%), Gaps = 70/293 (23%)

Query: 76   ISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGP---------------PL 120
            +     L G  G     GP   Q   G    + + G    PGP               P 
Sbjct: 1298 LPGQEGLPGKDGDTGPTGPQGPQGPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPG 1357

Query: 121  L----------SKPGD-----EDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGG 165
            L           +PG+     ++  P K GEP G + E    G  G + P    PGG G 
Sbjct: 1358 LPGFLGPRGPPGEPGEKGVPGKEGVPGKPGEP-GFKGERGDPGIKGDKGP----PGGKGQ 1412

Query: 166  PA--AVPEFNNYYG----SAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAP 219
            P    +P    + G       P   GP G  GP     G    PG+           G  
Sbjct: 1413 PGDPGIPGHKGHTGLMGPQGLPGENGPVGPPGP----PGQPGFPGL----------RGES 1458

Query: 220  GSMDPLQNSHEGYPNSQCNHYPGY--------------SRPGAGGGGGGGG-GGGGGSGG 264
             SM+ L+   +     Q      Y               RPG  G  G  G  G  G  G
Sbjct: 1459 PSMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPGPPGPPGKDGLPGRAGPMG 1518

Query: 265  GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQG 317
              G  G G     +G +       A    G  G G  G     G+   P + G
Sbjct: 1519 EPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGPPGIPGQPGEPG 1571


>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
          Length = 1499

 Score = 94.7 bits (234), Expect = 9e-19
 Identities = 221/878 (25%), Positives = 283/878 (32%), Gaps = 199/878 (22%)

Query: 82  LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGR 141
           L G  GGA   GP  E    G      + G   PPG     KPG++       GEP  GR
Sbjct: 226 LQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPG-----KPGED-------GEP--GR 271

Query: 142 YEHPG-LGALGTQQPPVAVPGGGGGPAA--VPEFNNYYGS----------AAPASGGPGG 188
             +PG +G  G+       PG  G P A  +P    + G            AP S G  G
Sbjct: 272 NGNPGEVGFAGS-------PGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAG 324

Query: 189 RAGPC--------------FDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPN 234
             GP                 + G Q +PG    H       G PG M PL     G P 
Sbjct: 325 PTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAH----GMPGKPGPMGPL-----GIPG 375

Query: 235 SQCNHYPGYSRPGAGGGGG--GGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAA 292
           S  + +PG   PG  G  G  G  G  G  G  G  G  G  G+     A        A 
Sbjct: 376 S--SGFPG--NPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAK 431

Query: 293 GGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQ 352
           G  G  G  G     G   SP  QG     GP G     +          GF+  AG   
Sbjct: 432 GPTGSPGTSGPPGSAGPPGSPGPQGS---TGPQG-----IRGQPGDPGVPGFKGEAGPKG 483

Query: 353 HPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAA 412
            P          +  P       G   P     +  PP P               G++ A
Sbjct: 484 EPG------PHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPV--------------GERGA 523

Query: 413 AGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYG 472
            G     + G   +   P    AQ    P  S G  G     SQG P  P     P   G
Sbjct: 524 PG-----NRGFPGSDGLPGPKGAQGERGPVGSSGPKG-----SQGDPGRPGEPGLPGARG 573

Query: 473 MGSNPHSQPQQ------SSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDA 526
           +  NP  Q  +       +P   G  GPPG     IGI+G+ PG+M G+  P +  SGD 
Sbjct: 574 LTGNPGVQGPEGKLGPLGAPGEDGRPGPPG----SIGIRGQ-PGSM-GLPGP-KGSSGD- 625

Query: 527 TWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQ--PQPPHLPPQAQYLPSQSQQRYQPQQ 584
                    P + G+ G +G   Q   P    +  P  P  PP      +  +    P  
Sbjct: 626 ---------PGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGL----AGERGEQGPPG 672

Query: 585 DMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSA 644
               +G      PP   GKP  +            +P   G++  L    E         
Sbjct: 673 PTGFQGLPGPPGPPGEGGKPGDQ-----------GVPGDPGAVGPLGPRGERGNPGERGE 721

Query: 645 SGSTSSQGDQSNP-AQSPFSPHASPHLSSIPG--GP--------------SPSPVGSPVG 687
            G T   G++       P  P  SP  S  PG  GP              +P P G   G
Sbjct: 722 PGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGG 781

Query: 688 ----SNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMA--GTQRN 741
                 +  +G      +PG   PP P G   E            P  RG +   G++ N
Sbjct: 782 IGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGE---------PGPRGLVGPPGSRGN 832

Query: 742 P-QMAQYGPQQ----TGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQ--MSQYGPQGN 794
           P    + GP       GP   P   PG +   G     Q   +G+ GPQ      GP G 
Sbjct: 833 PGSRGENGPTGAVGFAGP-QGPDGQPGVKGEPGEPG--QKGDAGSPGPQGLAGSPGPHGP 889

Query: 795 YSRPPAYSG----VPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRP 850
              P    G     P  +   PG    +         GP+ P G    G+    G++  P
Sbjct: 890 NGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEP--GKEGPPGLRGDP 947

Query: 851 -FPGNMSSMTPSSP--GMSQQGGPGM-------GPPMP 878
              G +    P+ P  G   +G PG        GPP P
Sbjct: 948 GSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGP 985



 Score = 81.6 bits (200), Expect = 8e-15
 Identities = 165/671 (24%), Positives = 206/671 (30%), Gaps = 136/671 (20%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS-KPGDED-DAPPKMGEPAGGR 141
            G  G    PG   E+ + G    +   G   PPGPP    KPGD+     P    P G R
Sbjct: 651  GPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPR 710

Query: 142  YEH--------PGLGALGTQQPPVAV-----PGGGGGPAAVPEFNNYYG-SAAPASGGPG 187
             E         PG+  L  ++          P G  GP+  P      G    P   G  
Sbjct: 711  GERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIA 770

Query: 188  GRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPL----QNSHEGYPNSQCNHYPGY 243
            G  GP  D+ G  +    G   + +  A G PG + P         +G P  +     G 
Sbjct: 771  GTPGPKGDRGGIGEKGAEGT--AGNDGARGLPGPLGPPGPAGPTGEKGEPGPR-----GL 823

Query: 244  SRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGS 303
              P    G  G  G  G +G  G  G  G  G                AG  G  G  GS
Sbjct: 824  VGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGS 883

Query: 304  SAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPS-----GAT 358
               +G    P  +GG    GP G              A GF   AG+   P      G  
Sbjct: 884  PGPHGPNGVPGLKGGRGTQGPPG--------------ATGFPGSAGRVGPPGPAGAPGPA 929

Query: 359  PTLNQLLTSPSPMMRSYGGSYPEYSS--PSAPPPPPS---------QPQSQAAAAGAAAG 407
              L +      P +R   GS+       P+ PP  P          QP        A   
Sbjct: 930  GPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTT 989

Query: 408  GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKR 467
            GQ+   GM      G +     P          PA +PG  GPT       P  P+    
Sbjct: 990  GQRGIVGMP-----GQRGERGMPGLPG------PAGTPGKVGPTGATGDKGPPGPV---- 1034

Query: 468  PQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGM-QYPQQQDSGDA 526
                              P   G  G PGP+  P G  G TPG    + +   + D G A
Sbjct: 1035 ----------------GPPGSNGPVGEPGPEG-PAGNDG-TPGRDGAVGERGDRGDPGPA 1076

Query: 527  TWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDM 586
                    +P   G  G  G    G      Q+  P    P     P ++ +R  P    
Sbjct: 1077 G-------LPGSQGAPGTPG--PVGAPGDAGQRGDPGSRGPIGP--PGRAGKRGLPGPQ- 1124

Query: 587  SQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASG 646
                 G R        K +H D     Q+       L G    LP              G
Sbjct: 1125 -----GPRGD------KGDHGDRGDRGQKGHRGFTGLQG----LP-----------GPPG 1158

Query: 647  STSSQGDQSNPAQSPFSPHASPHL---SSIPGGPSP-SPVGSP-VGSNQSRSGPISPASI 701
                QG    P   PF P   P     S   G P P  P+G P V  +   +GP  P   
Sbjct: 1159 PNGEQGSAGIPG--PFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPPGE 1216

Query: 702  PGSQMPPQPPG 712
            PG   PP PPG
Sbjct: 1217 PGPPGPPGPPG 1227



 Score = 79.7 bits (195), Expect = 3e-14
 Identities = 200/846 (23%), Positives = 274/846 (32%), Gaps = 115/846 (13%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
            G+ G    PGP       G        GQ   PG P     G + +A PK GEP     +
Sbjct: 444  GSAGPPGSPGPQ------GSTGPQGIRGQPGDPGVP-----GFKGEAGPK-GEPGPHGIQ 491

Query: 144  HPGLGALGTQ-------QPPVAVPGGGGGPAAVPEFNNYYGS-------AAPASGGPGGR 189
             P +G  G +        P    P G  G    P    + GS        A    GP G 
Sbjct: 492  GP-IGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGS 550

Query: 190  AGPCFDQH--GGQQSPGMGMMH--SASAAAAGAPGSMDPL----QNSHEGYPNS-QCNHY 240
            +GP   Q   G    PG+      + +    G  G + PL    ++   G P S      
Sbjct: 551  SGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQ 610

Query: 241  PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
            PG        G  G  G  G +G  G  G  GA G       +        AG  G  G 
Sbjct: 611  PGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGP 670

Query: 301  GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
             G +   G+   P   G G    PG  G      A       G +   G+   P G T  
Sbjct: 671  PGPTGFQGLPGPPGPPGEGGK--PGDQGVPGDPGAVGPLGPRGERGNPGERGEP-GITG- 726

Query: 361  LNQLLTSPSPMMRSYGGSYPEYS-SPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM--GL 417
                L     M   +G   P+ S  PS  P     P  Q         G     G   G+
Sbjct: 727  ----LPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGI 782

Query: 418  GKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNP 477
            G + GA+  A +     A+    P   PG  GPT    +G P    ++  P   G   NP
Sbjct: 783  G-EKGAEGTAGNDG---ARGLPGPLGPPGPAGPT--GEKGEPGPRGLVGPP---GSRGNP 833

Query: 478  HSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPP 537
             S+ +       G  GP GP   P G++G  PG       P Q+    +   +     P 
Sbjct: 834  GSRGENGPTGAVGFAGPQGPDGQP-GVKGE-PGE------PGQKGDAGSPGPQGLAGSPG 885

Query: 538  QYGQQGVSGYCQ-QGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQ 596
             +G  GV G    +G Q        P          P+ +     P  +  +EG      
Sbjct: 886  PHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEG------ 939

Query: 597  PPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSN 656
            PP   G P       +    P+  P   G   D     +         +G+T  +G    
Sbjct: 940  PPGLRGDPGSH--GRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGM 997

Query: 657  PAQSPFSPHASPHLSSIPG-GPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQS 715
            P Q          +  +PG   +P  VG P G+   + GP  P   PGS  P   PG + 
Sbjct: 998  PGQ-----RGERGMPGLPGPAGTPGKVG-PTGATGDK-GPPGPVGPPGSNGPVGEPGPEG 1050

Query: 716  ESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGP-SMSPHPSPGGQMHAG----- 769
             + +     +     ER    G + +P  A     Q  P +  P  +PG     G     
Sbjct: 1051 PAGNDGTPGRDGAVGER----GDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSR 1106

Query: 770  --ISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSG----PGPGMGISANNQ 823
              I    ++   G  GPQ    G +G++             ++G    PGP         
Sbjct: 1107 GPIGPPGRAGKRGLPGPQ-GPRGDKGDHGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQGS 1165

Query: 824  MHGQGPSQPCGAVPLGRMPSAGMQNRPFP----------GNMSSMTPSSPGMSQQGGPG- 872
                GP  P G  P G +  +G +  P P          G++    P  P     G PG 
Sbjct: 1166 AGIPGPFGPRG--PPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGP----PGEPGP 1219

Query: 873  MGPPMP 878
             GPP P
Sbjct: 1220 PGPPGP 1225



 Score = 79.3 bits (194), Expect = 4e-14
 Identities = 202/832 (24%), Positives = 263/832 (31%), Gaps = 155/832 (18%)

Query: 113 ADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVP-----GGGGGPA 167
           ADP  PP         +  P   +  GG   + G G  G +  P  VP      G  GPA
Sbjct: 83  ADPVTPP--------GECCPVCSQTPGGGNTNFGRGRKGQKGEPGLVPVVTGIRGRPGPA 134

Query: 168 AVPEFNNYYGSAAP-ASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAA-----GAPGS 221
             P      GS  P    GP GR GP   Q G    PG+     A          G  G 
Sbjct: 135 GPP------GSQGPRGERGPKGRPGPRGPQ-GIDGEPGVPGQPGAPGPPGHPSHPGPDGL 187

Query: 222 MDPLQNSHEGYPN-----SQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGA 276
             P      G        SQ    PG   P    G  G  G  GG+G  G  G  G  G 
Sbjct: 188 SRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGP 247

Query: 277 GAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAA 336
                +          G  G  G  G+    G   SP  +G      PG  G   L    
Sbjct: 248 MGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARG-----FPGAPGLPGLKGHR 302

Query: 337 AGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQ 396
                 G +   G       A PT         PM                P  P   P 
Sbjct: 303 GHKGLEGPKGEVGAPGSKGEAGPT--------GPM------------GAMGPLGPRGMPG 342

Query: 397 SQAAAAGAAAGGQQAAAGM----GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTM 452
            +       A GQ+ A GM    G    +G   ++  P     +  + P  + G  GP  
Sbjct: 343 ERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQG 402

Query: 453 GRSQGSPMDPMVMK-RPQLYGMGSNPHSQPQQSSP---YPGGSYGPPGPQRYPIGIQGRT 508
            R +  P  P+     P   G    P ++    SP    P GS GPPG      G QG T
Sbjct: 403 QRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSP----GPQGST 458

Query: 509 -PGAMAGMQYPQQQDSGDATWKETFWLM--PPQYGQQGVSGYCQQGQQPYYSQQPQP--- 562
            P  + G    Q  D G   +K        P  +G QG  G    G++     +  P   
Sbjct: 459 GPQGIRG----QPGDPGVPGFKGEAGPKGEPGPHGIQGPIG--PPGEEGKRGPRGDPGTV 512

Query: 563 -PHLP------------PQAQYLPSQSQQRYQPQQDMSQEGYGTRSQP--PLAPGKPNHE 607
            P  P            P +  LP     + +     S    G++  P  P  PG P   
Sbjct: 513 GPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGAR 572

Query: 608 DL--NLIQQERPSSLPDLSGSIDDLPTGTEATLS-----SAVSASGSTSSQGDQSNPAQS 660
            L  N   Q     L  L    +D   G   ++       ++   G   S GD   P ++
Sbjct: 573 GLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEA 632

Query: 661 PFSPHASPHLSSIPG-----GPSPSPVGSP-VGSNQSRSGPISPASIPGSQMPPQPPGSQ 714
                  P     PG     GPS  PVG P +   +   GP  P    G   PP PPG  
Sbjct: 633 --GNAGVPGQRGAPGKDGEVGPS-GPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGE- 688

Query: 715 SESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGP--SMSPHPSPGGQMHAGISS 772
                                 G +   Q     P   GP        +PG +   GI+ 
Sbjct: 689 ----------------------GGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITG 726

Query: 773 FQ-QSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHG-QGPS 830
              +   +G +GP     GP+G+    P  SG P    +GP    G+     + G  GP 
Sbjct: 727 LPGEKGMAGGHGPD----GPKGS----PGPSGTPGD--TGPPGLQGMPGERGIAGTPGPK 776

Query: 831 QPCGAV-PLGRMPSAGMQN-RPFPGNMSSMTPSSPGMSQQGGPG----MGPP 876
              G +   G   +AG    R  PG +    P+ P   ++G PG    +GPP
Sbjct: 777 GDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGP-TGEKGEPGPRGLVGPP 827



 Score = 62.4 bits (150), Expect = 5e-09
 Identities = 150/622 (24%), Positives = 192/622 (30%), Gaps = 96/622 (15%)

Query: 82   LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGR 141
            L G  G A   GPD  +   G    S   G   PPG  L   PG+   A    G P G +
Sbjct: 727  LPGEKGMAGGHGPDGPK---GSPGPSGTPGDTGPPG--LQGMPGERGIA----GTP-GPK 776

Query: 142  YEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG----GPGGRAGPCFDQH 197
             +  G+G  G +        G  G   +P      G A P       GP G  GP   + 
Sbjct: 777  GDRGGIGEKGAEGT-----AGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRG 831

Query: 198  G----GQQSPGMGMMHSASAAAAGAPGSM----DPLQNSHEGYPNSQCNHYPGYSRPGAG 249
                 G+  P   +  +      G PG      +P Q    G P  Q          G  
Sbjct: 832  NPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQ----------GLA 881

Query: 250  GGGGGGGGGG--GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGY 307
            G  G  G  G  G  GG G  G  GA G    A        A A G  G  G  G     
Sbjct: 882  GSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPP 941

Query: 308  GVLSSPRQQGGGMMMGPGG--GGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
            G+   P   G     GP G  GG             G           P G   T  Q  
Sbjct: 942  GLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPG--------PDGPPGPAGTTGQRG 993

Query: 366  TSPSPMMRSYGGSYPEYSSPSAPPP--PPSQPQSQAAAAGAAAGGQQAAAGM-GLGKDMG 422
                P      G   E   P  P P   P +     A       G     G  G   + G
Sbjct: 994  IVGMP------GQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPG 1047

Query: 423  AQYAAASPAWAAAQQRSHPAMSPGTPGPT-MGRSQGSPMDPMVMKRPQLYGMGSNPHSQP 481
             +  A +                G PGP  +  SQG+P  P  +  P   G   +P S+ 
Sbjct: 1048 PEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRG 1107

Query: 482  QQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLM-----P 536
                P   G  G PGPQ  P G +G          +  + D G    +    L      P
Sbjct: 1108 PIGPPGRAGKRGLPGPQG-PRGDKG---------DHGDRGDRGQKGHRGFTGLQGLPGPP 1157

Query: 537  PQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQP-----QQDMSQEGY 591
               G+QG +G       P+  + P  P  P   +  P        P       +   EG 
Sbjct: 1158 GPNGEQGSAGI----PGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGP 1213

Query: 592  GTRSQPPLAPGKPNH------EDLNLIQQERPSSLPDLS---GSIDD---LPTGTEATLS 639
                 PP  PG P H      + +    +  P  LP+ +    + DD      G  ATL 
Sbjct: 1214 PGEPGPPGPPGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDDKNKTDPGVHATLK 1273

Query: 640  SAVS-ASGSTSSQGDQSNPAQS 660
            S  S      S  G + +PA++
Sbjct: 1274 SLSSQIETMRSPDGSKKHPART 1295



 Score = 57.8 bits (138), Expect = 1e-07
 Identities = 107/440 (24%), Positives = 124/440 (28%), Gaps = 73/440 (16%)

Query: 79   NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS--------------KP 124
            N   G  G   PQ GPD +    G   +    G A  PGP  L+              K 
Sbjct: 839  NGPTGAVGFAGPQ-GPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKG 897

Query: 125  GDEDDAPP-KMGEP-AGGRYEHPGLGALGTQQPPVAVPGGGGGPA--AVPEFNNYYGSAA 180
            G     PP   G P + GR   PG         P+  PG  G P     P  +   G   
Sbjct: 898  GRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRG 957

Query: 181  PAS--GGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCN 238
            PA   GGPG +  P  D   G   P      +      G PG     Q    G       
Sbjct: 958  PAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPG-----QRGERG------- 1005

Query: 239  HYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGG 298
              PG   P    G  G  G  G  G  G  G  G+ G          A      G  G  
Sbjct: 1006 -MPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAV 1064

Query: 299  GYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGAT 358
            G  G     G    P  QG     GP G         A G         AGQ   P    
Sbjct: 1065 GERGDRGDPGPAGLPGSQGAPGTPGPVG---------APGD--------AGQRGDPG--- 1104

Query: 359  PTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAG-GQQAAAGM-G 416
                           S G   P   +     P P  P+      G     GQ+   G  G
Sbjct: 1105 ---------------SRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGFTG 1149

Query: 417  LGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSN 476
            L    G          A       P   PG  GP+       P+ P  +  P + G    
Sbjct: 1150 LQGLPGPPGPNGEQGSAGIPGPFGPRGPPGPVGPSGKEGNPGPLGP--IGPPGVRGSVGE 1207

Query: 477  PHSQPQQSSPYPGGSYGPPG 496
               +     P P G  GPPG
Sbjct: 1208 AGPEGPPGEPGPPGPPGPPG 1227


>gi|55956910 meningioma  1 [Homo sapiens]
          Length = 1320

 Score = 93.2 bits (230), Expect = 3e-18
 Identities = 130/486 (26%), Positives = 165/486 (33%), Gaps = 84/486 (17%)

Query: 40  HHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSL----------------- 82
           H    H +LQQQ  Q QQQQQQQQQQQQQQQQQQ     N +L                 
Sbjct: 514 HPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQP 573

Query: 83  ------------------GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKP 124
                             GG  GG  QP  + E    GG+  +   G  +   P L  + 
Sbjct: 574 NLAQLGHPGDVGQGGLVHGGPVGGLAQPNFERE----GGSTGAGRLGTFEQQAPHLAQES 629

Query: 125 GDEDDAPPKMGEPAGGRYEHPGLGA-LGTQQP---PVAVPGGGG----GPAAVPEFNNYY 176
                  P  G+    R    GL A  G   P   P   PGG G    GP   P      
Sbjct: 630 AWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGE 689

Query: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ 236
           G   PA   PG + G      G  QSPG G +   SAA+   P   D   ++  G P   
Sbjct: 690 GH-VPALPSPGLQFGGSLGGLGQLQSPGAG-VGLPSAASERRPPPPDFATSALGGQPGFP 747

Query: 237 CNHYPGYSRPGAGGGGGG--GGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
                  S P +G G       GGGGGS GGGGGGGA             +A+   A   
Sbjct: 748 FGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSL 807

Query: 295 GGGGGYGGSSAGYG----------------VLSSPRQQGGGMMMGPGGGGAASLSKAAAG 338
           G           +G                 L +P          P  G          G
Sbjct: 808 GSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDG 867

Query: 339 SAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ 398
           +A  G     G +  P G  P       +P P   S  G+    S  S PP PP+Q    
Sbjct: 868 AAVAG---NPGSDYFPGGTAP------GAPGPGGPS--GTSSSGSKASGPPNPPAQGDGT 916

Query: 399 AAA------AGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTM 452
           + +      + +   G+  + G G G+    + +          + S    S G PG + 
Sbjct: 917 SLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSP 976

Query: 453 GRSQGS 458
           G+ Q S
Sbjct: 977 GQQQAS 982



 Score = 81.6 bits (200), Expect = 8e-15
 Identities = 230/994 (23%), Positives = 308/994 (30%), Gaps = 251/994 (25%)

Query: 115 PPGP--PLLSKPGDEDDAPPKMG---EPAGGRYE-HPGLGALGTQQPPVAVPGGGGGPAA 168
           PPGP  P +S  G+    PP +G   EP G     H  L A G Q  PV           
Sbjct: 44  PPGPVDPAMSALGE----PPILGMNMEPYGFHARGHSELHAGGLQAQPV----------- 88

Query: 169 VPEFNNYYGSAAPASGGPGG----RAGPCFDQHGGQQSPGMGMMHSAS----AAAAGAPG 220
               + ++G   P  G PG     +  P F  + G   PG   +H         AAG  G
Sbjct: 89  ----HGFFGGQQPHHGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLG 144

Query: 221 SMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGG------------SGGGGGG 268
           S  P    +E    SQ     G  RPG        G                 +      
Sbjct: 145 SQPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFH 204

Query: 269 GGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSP-------------RQ 315
           G   + G+ + ++         A         G + +G+  + SP             RQ
Sbjct: 205 GLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQ 264

Query: 316 QGGGMMMG----PGGGGAASLSKAAAGSAAGG-----------------FQRFAGQNQHP 354
             GG   G    P   G   LSK  A                       F+RF+G  + P
Sbjct: 265 VPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMP 324

Query: 355 SGATPTLNQ---LLTSPS---PMMRSYGGSYPEYSSPSAPPP--------PPSQPQSQAA 400
            G  P++     L+  P    P  +      P    P  PP         PP+ P+ Q  
Sbjct: 325 VGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQG 384

Query: 401 AAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQ---- 456
            AG  +GG Q    M   +    +Y        +    S P  S   P P    +Q    
Sbjct: 385 EAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQH 444

Query: 457 -GSPMDPMVMKRPQLYGMGS------------------NPHSQPQQSSPYPG--GSYGPP 495
             +P    V KRP+    GS                  + H  P   S YPG  G + PP
Sbjct: 445 FDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSP---SAYPGLPGEFTPP 501

Query: 496 GPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPY 555
            P  +P G   + P        P  Q                           QQ QQ  
Sbjct: 502 VPDSFPSGPPLQHPA-------PDHQS-------------------------LQQQQQQQ 529

Query: 556 YSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDL---NLI 612
             QQ Q             Q QQ+ Q QQ   Q+             +   + L   NL 
Sbjct: 530 QQQQQQ-------------QQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLA 576

Query: 613 QQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSS 672
           Q   P  +    G +   P G  A   +     GST +    +   Q+P     S   S 
Sbjct: 577 QLGHPGDVGQ-GGLVHGGPVGGLAQ-PNFEREGGSTGAGRLGTFEQQAPHLAQESAWFS- 633

Query: 673 IPGGPSPSPVGSPVGSNQSRSG-PISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQE 731
              GP P P G  +      SG P        S  PP PPG          L + P+ QE
Sbjct: 634 ---GPHPPP-GDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSG------VLFRGPL-QE 682

Query: 732 RGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGP 791
              M G    P +               PSPG Q    +                   G 
Sbjct: 683 PMRMPGEGHVPAL---------------PSPGLQFGGSL-------------------GG 708

Query: 792 QGNYSRPPAYSGVPSASYS--GPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNR 849
            G    P A  G+PSA+     P P    SA   + GQ P  P GA        AG Q+ 
Sbjct: 709 LGQLQSPGAGVGLPSAASERRPPPPDFATSA---LGGQ-PGFPFGA--------AGRQST 756

Query: 850 PFPGNMSSMTPSSPGMSQQGGPGMG----PPMPTVNRKAQEAAAAVMQAAANSAQSRQGS 905
           P  G   +  PS+ G     G G G    PP P   + +Q  +A+ + A +  + ++  S
Sbjct: 757 PHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDF-QPSQRTSASKLGALSLGSFNKPSS 815

Query: 906 FPGMNQSGLMASSSPYSQPM------NNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMM 959
              +     +A+ S   Q M       N +   N + PP        N +    G A   
Sbjct: 816 KDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETD---GAAVAG 872

Query: 960 SPGESKLPLPLKADGKEEGTPQPESKSKKSSSST 993
           +PG    P      G   G P P   S  SSS +
Sbjct: 873 NPGSDYFP-----GGTAPGAPGPGGPSGTSSSGS 901



 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 119/475 (25%), Positives = 168/475 (35%), Gaps = 65/475 (13%)

Query: 83   GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRY 142
            GG+ GG  Q    ++ P  G    SAA  +  PP     S  G +   P      A GR 
Sbjct: 703  GGSLGGLGQ----LQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFP----FGAAGRQ 754

Query: 143  EHPGLGALGTQQPPVA-----VPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
              P  G  G   PP A       GGGGG  A P   ++  S   ++   G  +   F++ 
Sbjct: 755  STPHSGP-GVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKP 813

Query: 198  GGQQSP-GMGMMHSASAA------AAGAP-------------GSMDPLQNSHEGYP---N 234
              + +  G   + + S A      + GAP             G     QN  +G     N
Sbjct: 814  SSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGN 873

Query: 235  SQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG----GAGAGGAGAGAVAAAAAAAAA 290
               +++PG + PGA G GG  G    GS   G       G G   +    + + +     
Sbjct: 874  PGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGK 933

Query: 291  AAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLS---KAAAGSAAGGFQRF 347
               GGGG G G      G +S P          P  GGA  +S   + A+G+A GG    
Sbjct: 934  PVSGGGGRGRGRRKRDSGHVS-PGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSS-- 990

Query: 348  AGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAG 407
            AG+ +   GA     + LTSPS      G        P          +S +++      
Sbjct: 991  AGETR---GAPTPHEKALTSPS---WGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEF 1044

Query: 408  GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKR 467
                 +     +D  +  +    A   A +      SP  P   +G  +  P  P     
Sbjct: 1045 ASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAP----- 1099

Query: 468  PQLYGMG--SNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQ 520
            P   G+G  SN  S P     Y GG  G PG    P   Q RTP + +G   P +
Sbjct: 1100 PPALGLGIMSNSTSTPDS---YGGG--GGPGHPGTPGLEQVRTPTSSSGAPPPDE 1149



 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 109/462 (23%), Positives = 164/462 (35%), Gaps = 81/462 (17%)

Query: 1121 QPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHD 1180
            Q P   + GS    Q     G N     PG       AS  HG      GG +  +    
Sbjct: 95   QQPHHGHPGSHHPHQHHPHFGGNFGGPDPG-------ASCLHGGRLLGYGGAAGGLGSQP 147

Query: 1181 PFSD----VSDSSFPKRNSMTPNAP------YQQGMS---MPDVMGRMPYEPNKDP-FGG 1226
            PF++    +++S  P+  S  P  P      +  G S   +P     +   PN+   F G
Sbjct: 148  PFAEGYEHMAESQGPE--SFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHG 205

Query: 1227 MRKVPGSSEPFMTQGQMPNSSMQDM--YN---QSPSGAMSNLGMGQRQ-QFPYGASYDRR 1280
            +    GS    +   ++ N    D   YN   ++PSG          + Q P+ A+    
Sbjct: 206  LPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAA---- 261

Query: 1281 HEPYGQQYPGQG-PPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYS 1339
                G+Q PG   P +   P      GL       K H      PP ++ +      Q  
Sbjct: 262  ----GRQVPGGAFPGASAMPRAAGMVGLS------KMHAQ----PPQQQPQ----QQQQP 303

Query: 1340 SQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSS 1399
             QQQ+ +  +   +SG  + P+ G  P   SR  +  P Q      PP     P Q    
Sbjct: 304  QQQQQQHGVFFERFSGARKMPV-GLEPSVGSRHPLMQPPQ---QAPPPPQQQPPQQPPQQ 359

Query: 1400 EGPQQNMWAARND-----MPYPYQNRQG-PGGPTQ--APPYPGMNRTDDMMVPDQRINHE 1451
            + P       R +     +P P Q   G P G  Q   P  P  +   +   P  R+ + 
Sbjct: 360  QPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEY--PIHRLENR 417

Query: 1452 SQWPSH-----VSQRQPYMSSSASMQPITRPP------QPSYQTPPSLPNHISRAPSPAS 1500
            S  P       +    P  + +  +Q    PP      +P +  P S       + + + 
Sbjct: 418  SMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSM 477

Query: 1501 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPP 1542
               +L+N +SPS  P LP     +  P VP S  +GPP Q P
Sbjct: 478  HNGALDNHLSPSAYPGLPG----EFTPPVPDSFPSGPPLQHP 515



 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 207/923 (22%), Positives = 264/923 (28%), Gaps = 200/923 (21%)

Query: 46   HALQQQLNQFQQQQQQQQQQQQQQQQQQHP---ISNNNSL------------GGAGGGAP 90
            H L Q   Q     QQQ  QQ  QQQ   P   +   NS             G   GG  
Sbjct: 335  HPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQ 394

Query: 91   QPGP-------DMEQPQHGGAKDSA------AGGQADPPGPPLLSKPGDEDDAPPKMGEP 137
              GP         E P H     S             PP     ++     DAPP M   
Sbjct: 395  DGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVA 454

Query: 138  AGGRYEHPGL---------------GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPA 182
               R++ PG                GAL     P A PG  G     P   + + S  P 
Sbjct: 455  KRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPG--EFTPPVPDSFPSGPPL 512

Query: 183  SG-GPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCN-HY 240
                P  ++     Q   QQ                       L        N Q     
Sbjct: 513  QHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQ 572

Query: 241  PGYSRPGAGGGGGGGGGGGGGSGGGGG-------GGGAGAGGAGAGAVAAAAAAAAAAAG 293
            P  ++ G  G  G GG   GG  GG         GG  GAG  G     A   A  +A  
Sbjct: 573  PNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESA-- 630

Query: 294  GGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQH 353
                  + G     G L   R  G G+   P   G    S A      G    F G  Q 
Sbjct: 631  -----WFSGPHPPPGDLLPRRMGGSGL---PADCGPHDPSLAPPPPPGGSGVLFRGPLQE 682

Query: 354  PSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAA 413
            P    P    +   PSP ++ +GGS                        G     Q   A
Sbjct: 683  PM-RMPGEGHVPALPSPGLQ-FGGSL-----------------------GGLGQLQSPGA 717

Query: 414  GMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGM 473
            G+GL               AA+++R  P   P      +G   G P            G 
Sbjct: 718  GVGLPS-------------AASERRPPP---PDFATSALGGQPGFPFGAA--------GR 753

Query: 474  GSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFW 533
             S PHS P  +SP   G  G            G + G   G  YP Q D           
Sbjct: 754  QSTPHSGPGVNSPPSAGGGG------------GSSGGGGGGGAYPPQPD----------- 790

Query: 534  LMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQA--QYLPSQSQQRYQPQQDMSQEGY 591
              P Q       G    G    +++     +L  Q+    L +  Q         +    
Sbjct: 791  FQPSQRTSASKLGALSLGS---FNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVT 847

Query: 592  GTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQ 651
              +  PP    K       L Q E   +    +   D  P GT          SG++SS 
Sbjct: 848  FNKKNPPEGKRK-------LSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSG 900

Query: 652  GDQSNPAQSP-------FSPHAS-PHLSSIPGGPSPSPVGSPVGSNQSRSGPISP----- 698
               S P   P        SP+ +    S   G P     G   G  +  SG +SP     
Sbjct: 901  SKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFD 960

Query: 699  ---ASIPGSQMPPQPPGSQSES------SSHPALSQSPMPQERGFMAGTQRNPQMAQYGP 749
               A+      P   PG Q  S      SS      +P P E+   + +         G 
Sbjct: 961  KYSAAPDSGGAPGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGD 1020

Query: 750  QQT------GPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQ----MSQYGPQG--NYSR 797
            Q        G + S   SP       +  F     S +Y  +     S   PQ     SR
Sbjct: 1021 QPDLIGSLDGGAKSDSSSPN------VGEFASDEVSTSYANEDEVSSSSDNPQALVKASR 1074

Query: 798  PPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSS 857
             P  +G P     G G G            GP  P  A+ LG M ++      + G    
Sbjct: 1075 SPLVTGSPKLPPRGVGAGE----------HGPKAPPPALGLGIMSNSTSTPDSYGGGGGP 1124

Query: 858  MTPSSPGMSQQGGP--GMGPPMP 878
              P +PG+ Q   P    G P P
Sbjct: 1125 GHPGTPGLEQVRTPTSSSGAPPP 1147



 Score = 45.1 bits (105), Expect = 8e-04
 Identities = 165/788 (20%), Positives = 257/788 (32%), Gaps = 201/788 (25%)

Query: 592  GTRSQPPLAPGKPNHEDLNLIQQ---ERPSSLPDLSGS-------------IDDLPTGTE 635
            G  SQPP A G  +  +    +    +RP +LPD   S             +D  P    
Sbjct: 142  GLGSQPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRA- 200

Query: 636  ATLSSAVSASGSTS---------SQG-----DQSNPAQSP------FSPHAS----PHLS 671
            A+     S+SGS S         +QG     + + P ++P      FSP  S    PH +
Sbjct: 201  ASFHGLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYA 260

Query: 672  S---IPGGPSPSPVGSP-----VGSNQSRSGPISPASIPGSQMPPQPPGSQ--------S 715
            +   +PGG  P     P     VG ++  + P  P   P  Q  PQ    Q        S
Sbjct: 261  AGRQVPGGAFPGASAMPRAAGMVGLSKMHAQP--PQQQPQQQQQPQQQQQQHGVFFERFS 318

Query: 716  ESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQ 775
             +   P   +  +      M   Q+ P   Q  P Q  P   P P P      G+   Q 
Sbjct: 319  GARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPP------GLLVRQN 372

Query: 776  SNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGA 835
            S       PQ  +             +G PS      GP +            PSQ    
Sbjct: 373  SCPPALPRPQQGE-------------AGTPSGGLQDGGPML------------PSQHAQF 407

Query: 836  VPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAA 895
                  P   ++NR       SM P S  +     P   PP    N++ Q   A      
Sbjct: 408  ----EYPIHRLENR-------SMHPYSEPVFSMQHP---PPQQAPNQRLQHFDAPPYM-- 451

Query: 896  ANSAQSRQGSFPGMNQSGLMAS--SSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASV 953
             N A+  +  FPG       AS   S ++  ++N  S       P    P + +S  +  
Sbjct: 452  -NVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGEFTPPVPDSFPSGP 510

Query: 954  GLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKL 1013
             L    +P    L    +   +++   Q + + ++             + ++ +  +++ 
Sbjct: 511  PLQHP-APDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQR 569

Query: 1014 WVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNV 1073
                 L  +   G        VG+  L      V    +GGLAQ N  ++         +
Sbjct: 570  LRQPNLAQLGHPGD-------VGQGGL------VHGGPVGGLAQPNFEREGGSTGAG-RL 615

Query: 1074 GTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQG 1133
            GT    A  L ++   +          G  PPP                          G
Sbjct: 616  GTFEQQAPHLAQESAWF---------SGPHPPP--------------------------G 640

Query: 1134 PQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKR 1193
               P+  G + +   P D  P  P+  P     P  GG                      
Sbjct: 641  DLLPRRMGGSGL---PADCGPHDPSLAP----PPPPGG---------------------- 671

Query: 1194 NSMTPNAPYQQGMSMPDVMGRMPYEPNKD-PFGGMRKVPGSSEPFMTQGQMPNSSMQDMY 1252
            + +    P Q+ M MP   G +P  P+    FGG     G  +       +P+++ +   
Sbjct: 672  SGVLFRGPLQEPMRMPGE-GHVPALPSPGLQFGGSLGGLGQLQSPGAGVGLPSAASE--- 727

Query: 1253 NQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPG-QGPPS----GQPPYGGHQPGL 1307
             + P    +   +G +  FP+GA+  R+  P+    PG   PPS    G    GG   G 
Sbjct: 728  RRPPPPDFATSALGGQPGFPFGAA-GRQSTPHSG--PGVNSPPSAGGGGGSSGGGGGGGA 784

Query: 1308 YPQQPNYK 1315
            YP QP+++
Sbjct: 785  YPPQPDFQ 792



 Score = 41.6 bits (96), Expect = 0.009
 Identities = 33/102 (32%), Positives = 40/102 (39%), Gaps = 14/102 (13%)

Query: 58  QQQQQQQQQQQQQQQQHPISNNNSLG----------GAGGGAPQPGPDMEQPQHGGAKDS 107
           QQQ QQQQQ QQQQQQH +      G            G   P   P  + P     +  
Sbjct: 294 QQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPP 353

Query: 108 AAGGQADPPGPP-LLSKPGDEDDAPPKMGEPAGGRYEHPGLG 148
               Q  PP PP LL +   ++  PP +  P  G    P  G
Sbjct: 354 QQPPQQQPPPPPGLLVR---QNSCPPALPRPQQGEAGTPSGG 392



 Score = 33.1 bits (74), Expect = 3.1
 Identities = 81/347 (23%), Positives = 117/347 (33%), Gaps = 83/347 (23%)

Query: 1259 AMSNLG----MGQRQQFPYG---ASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQ 1311
            AMS LG    +G   + PYG     +   H    Q  P  G   GQ P+ GH    +P Q
Sbjct: 51   AMSALGEPPILGMNME-PYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPHQ 109

Query: 1312 PNYKRHMDGMYGPP----AKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRP------- 1360
              +  H  G +G P    +  H G +               YGG+  G   +P       
Sbjct: 110  --HHPHFGGNFGGPDPGASCLHGGRLLG-------------YGGAAGGLGSQPPFAEGYE 154

Query: 1361 --IQGQYPYPYSRERMQGPGQI--------QTHGIPPQMM---GGPLQSSSSEGPQQNMW 1407
               + Q P  +  +R   PG +         +H +P   +     P +++S  G   +  
Sbjct: 155  HMAESQGPESFGPQR---PGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSG 211

Query: 1408 AARNDMPYPYQNRQGPGGPTQAPPYPGMNRTD--DMMVPDQRINHESQWPSHVSQRQ--- 1462
            +  + +       QG     +   YPG   +   DM  P    + E Q P + + RQ   
Sbjct: 212  SDSHSLEPRRVTNQGAVDSLEY-NYPGEAPSGHFDMFSPS---DSEGQLPHYAAGRQVPG 267

Query: 1463 ------PYMSSSASM--------QPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENR 1508
                    M  +A M        QP  + PQ   Q       H        S  R +   
Sbjct: 268  GAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQH-GVFFERFSGARKMPVG 326

Query: 1509 MSPSKSPFLPSMKMQKVMPTVPTSQVTGPPP--QPPPIRREITFPPG 1553
            + PS     P M+  +  P  P  Q    PP  QPPP       PPG
Sbjct: 327  LEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPP-------PPG 366


>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
            sapiens]
          Length = 1685

 Score = 91.7 bits (226), Expect = 7e-18
 Identities = 211/866 (24%), Positives = 276/866 (31%), Gaps = 145/866 (16%)

Query: 82   LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDE-------------D 128
            L G  G    PGP      H    D     +  PPGPP    PGD+             D
Sbjct: 424  LDGQPGAPGLPGPPGPAGPHIPPSDEIC--EPGPPGPP--GSPGDKGLQGEQGVKGDKGD 479

Query: 129  DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG--------GGGGPAAVPEFNNYYGSAA 180
                 +G    G    PGL  L      +  PG        G  GP  +P      G  A
Sbjct: 480  TCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPG--A 537

Query: 181  PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMD-PLQNSHEGYPNSQCNH 239
            P   G  G  G      G +   G       S  A G PG    P Q+   G P  +   
Sbjct: 538  PGFPGSKGEPGDILTFPGMKGDKG----ELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEP 593

Query: 240  ----YPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
                + G   P    G  G  G  G  G  G G     G  G   VA            G
Sbjct: 594  GGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKG 653

Query: 296  GGG------------GYGGSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLSKAAAGSAAG 342
              G            G  G     G+   P   G   + G PG  G   +         G
Sbjct: 654  DPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPG 713

Query: 343  --GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGG--SYPEYSSPSAPPPPPSQPQSQ 398
              GF    G    P GA  T  ++     P    + G    P ++ P  PP PP  P  +
Sbjct: 714  PKGFPGIPG----PPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPG-PPGPPGLPGFK 768

Query: 399  AAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGS 458
             A       G     G   G+  G               +  P   PG PG  +    G 
Sbjct: 769  GALGPKGDRGFPGPPGPP-GRT-GLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGP 826

Query: 459  PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSY--GPPGPQRYPIGIQGRTPGAMAGMQ 516
            P  P  + +P L+G+        ++  P P G    GPPG +  P GI G  PG +    
Sbjct: 827  PGIPGPIGQPGLHGIPG------EKGDPGPPGLDVPGPPGERGSP-GIPG-APGPIGPPG 878

Query: 517  YPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQY--LPS 574
             P       A+        P   G+ G+ G             P P  +P ++    L  
Sbjct: 879  SPGLPGKAGASG------FPGTKGEMGMMGP---------PGPPGPLGIPGRSGVPGLKG 923

Query: 575  QSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGT 634
                + QP         G++ +P L PG P   D NL+  +     P L G         
Sbjct: 924  DDGLQGQPGLPGPTGEKGSKGEPGL-PGPPGPMDPNLLGSKGEKGEPGLPG--------- 973

Query: 635  EATLSSAVSASGSTSSQGDQSNPAQS-------PFSPHASPHLSSIPGGPSPSPVGSPVG 687
               +       G     GD   P  S       P  P  +P L   PG   P  +   +G
Sbjct: 974  ---IPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIG 1030

Query: 688  SN-----QSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNP 742
                   Q   GP  P+ +PG    P  PG + +    P +S   +P     + G +  P
Sbjct: 1031 DMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGD-PGISSIGLPG----LPGPKGEP 1085

Query: 743  QMAQYGPQQTG-------PSMSPHP-SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGN 794
             +  Y P   G       P +   P +PG +   G+  F      GT GP     GP+G 
Sbjct: 1086 GLPGY-PGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFP-----GTPGPP----GPKG- 1134

Query: 795  YSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPS-AGMQNRPF-P 852
             S PP   G+P      PGP  G     Q    GP    G      +P  AG +  P  P
Sbjct: 1135 ISGPPGNPGLPGE----PGPVGGGGHPGQ---PGPPGEKGKPGQDGIPGPAGQKGEPGQP 1187

Query: 853  GNMSSMTPSSPGMSQQGGPGMGPPMP 878
            G  +   P  PG+S Q G G  P +P
Sbjct: 1188 GFGNPGPPGLPGLSGQKGDGGLPGIP 1213



 Score = 91.3 bits (225), Expect = 1e-17
 Identities = 197/793 (24%), Positives = 241/793 (30%), Gaps = 166/793 (20%)

Query: 92   PGPDMEQPQHGGAKDSAAGGQADPPGPP----LLSKPGDEDDAPPKMGEPAGGRYEHPGL 147
            PGP       G        G   PPGPP    L   PG + D  P  G+P  G    PGL
Sbjct: 759  PGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPN-GQP--GPMGPPGL 815

Query: 148  GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM 207
              +G Q PP   P G  GP   P  +   G      G PG          G + SPG+  
Sbjct: 816  PGIGVQGPPG--PPGIPGPIGQPGLHGIPGE----KGDPGPPGLDVPGPPGERGSPGI-- 867

Query: 208  MHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG--GGSGGG 265
                     GAPG + P        P S     PG   PG  G  G  G  G  G  G  
Sbjct: 868  --------PGAPGPIGP--------PGS-----PGL--PGKAGASGFPGTKGEMGMMGPP 904

Query: 266  GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPG 325
            G  G  G  G                 G  G  G  GS    G+   P      ++   G
Sbjct: 905  GPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKG 964

Query: 326  GGGAASLSKAAAGSAAGGFQRFAGQNQHPS-GATPTL--------------NQLLTSPSP 370
              G   L      S   G+Q   G    P     P L                 L  P  
Sbjct: 965  EKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPG 1024

Query: 371  MMRSYGG-SYPEYSSPSAPPPP---PSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYA 426
            +  + G   +P       PP P   P QP S          G    + +GL    G +  
Sbjct: 1025 LKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGE 1084

Query: 427  AASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSP 486
               P +            PG PG      +GS  DP       L G+   P ++ Q   P
Sbjct: 1085 PGLPGY------------PGNPG-----IKGSVGDP------GLPGLPGTPGAKGQPGLP 1121

Query: 487  YPGGSYGPPGPQRY--PIGIQG--RTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQ 542
               G+ GPPGP+    P G  G    PG + G  +P Q        K      P Q G  
Sbjct: 1122 GFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGK------PGQDGIP 1175

Query: 543  GVSGYCQQGQQPYYSQQPQPPHLP--------------PQAQYLPSQSQQRYQPQQDMSQ 588
            G +G   +  QP +   P PP LP              P    LP        P+ +   
Sbjct: 1176 GPAGQKGEPGQPGFG-NPGPPGLPGLSGQKGDGGLPGIPGNPGLPG-------PKGEPGF 1227

Query: 589  EGYGTRSQPPLAPGKPNHE---------------DLNLIQQERPSSLPDLSGSIDDLPTG 633
             G+     PP  PG P                     L   E P  LP   G   +    
Sbjct: 1228 HGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNP 1287

Query: 634  TEATLSSAVSASGSTSSQGDQSNPAQSPFS-PHASPHLSSIPGGPS-PSPVGSPVGSNQS 691
             +  L       G     G Q NP +   +     P L  +PG P    P G P      
Sbjct: 1288 GQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVP------ 1341

Query: 692  RSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQ 751
              G   P   PG   PP PPG    S     +     P       G +  P     GPQ 
Sbjct: 1342 --GSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLP-----GPQ- 1393

Query: 752  TGPSMSPHPS--PGGQMHAGISSFQ-------------QSNSSGTYGPQMSQYGPQGNYS 796
             GP   P P+  PG     G+  F              Q  + G  GP     GP G   
Sbjct: 1394 -GPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPP----GPDG-LQ 1447

Query: 797  RPPAYSGVPSASY 809
             PP   G  S ++
Sbjct: 1448 GPPGPPGTSSVAH 1460



 Score = 73.2 bits (178), Expect = 3e-12
 Identities = 212/887 (23%), Positives = 263/887 (29%), Gaps = 186/887 (20%)

Query: 84  GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP----LLSKPGD--EDDAPPKMGEP 137
           GA G    PG +  + + G        G   PPGPP    +  +PG       P   G P
Sbjct: 114 GAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNP 173

Query: 138 AGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
                 +PG   +     P  +PG  G P          G   P   GP G  GP  +  
Sbjct: 174 G-----YPGPPGIQGLPGPTGIPGPIGPPGPP-------GLMGPP--GPPGLPGPKGNMG 219

Query: 198 GGQQSPGMGMMHSASAAAAGAPGSMDP--------LQNSHEGYPNSQCNHYPGYSRPGAG 249
              Q P             G PG +           Q   +G P  +    P    PG  
Sbjct: 220 LNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGP----PGIR 275

Query: 250 GGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV 309
           G  G  GG  G  G  G  G  G  G                 G  G  G  G     G 
Sbjct: 276 GPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGD 335

Query: 310 LSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPS 369
              P   G  +++   G G     K   G    G     G+   P    P          
Sbjct: 336 TGPPGPPG--LVIPRPGTGITIGEKGNIGLP--GLPGEKGERGFPGIQGPP--------- 382

Query: 370 PMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAAS 429
                 G   P  ++   PP PP  P  +         G       GL    GA      
Sbjct: 383 ------GLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGP 436

Query: 430 PAWAAAQ-QRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYG---------MGSNPHS 479
           P  A      S     PG PGP      GSP D  +     + G         +G+    
Sbjct: 437 PGPAGPHIPPSDEICEPGPPGPP-----GSPGDKGLQGEQGVKGDKGDTCFNCIGTGISG 491

Query: 480 QPQQSS----PYPGGSYGPPGPQRY--------PIGIQGRTPGAMAGMQYPQQQ-DSGDA 526
            P Q      P P GS G PG +          P G+ G  PGA     +P  + + GD 
Sbjct: 492 PPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPG-IPGAPGAPGFPGSKGEPGDI 550

Query: 527 TWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLP--PQAQYLPSQSQQRYQPQQ 584
               TF  M    G+ G  G             P  P LP  P    LP     + +P  
Sbjct: 551 L---TFPGMKGDKGELGSPG------------APGLPGLPGTPGQDGLPGLPGPKGEPGG 595

Query: 585 DMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDL---------PTGTE 635
              +   G    PP  PG                 LP L G+I  +         P G E
Sbjct: 596 ITFKGERG----PPGNPG-----------------LPGLPGNIGPMGPPGFGPPGPVG-E 633

Query: 636 ATLSSAVSASGSTSSQGDQSNPAQSPFSPH-----------------ASPHLSSIPGGPS 678
             +       G     G + +P Q+   P                    P L   PG P 
Sbjct: 634 KGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPG 693

Query: 679 -PSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSE--SSSHPALSQSPMPQ-ERGF 734
            P   G P        GP  P   PG   PP  PG+         P     P P+ E GF
Sbjct: 694 IPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGF 753

Query: 735 -MAGTQRNPQMAQY----GPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQY 789
            + G    P +  +    GP+  G    P P PG     G+         G  GP   Q 
Sbjct: 754 ALPGPPGPPGLPGFKGALGPK--GDRGFPGP-PGPPGRTGLDGL--PGPKGDVGPN-GQP 807

Query: 790 GPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHG----QGPSQPCG---AVPLGRMP 842
           GP G    PP   G+      GP    G      +HG    +G   P G     P G   
Sbjct: 808 GPMG----PPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERG 863

Query: 843 SAGMQNRPFPGNMSSMTPSSPGMSQQGG----PG-------MGPPMP 878
           S G+   P P       P SPG+  + G    PG       MGPP P
Sbjct: 864 SPGIPGAPGPIG----PPGSPGLPGKAGASGFPGTKGEMGMMGPPGP 906



 Score = 63.2 bits (152), Expect = 3e-09
 Identities = 106/421 (25%), Positives = 121/421 (28%), Gaps = 127/421 (30%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
            G GG   QPGP  E+ + G        GQ   PG P    PG                  
Sbjct: 1152 GGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGP----------------- 1194

Query: 144  HPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSP 203
             PGL  L  Q+    +PG  G P                 G PG +  P F    G Q P
Sbjct: 1195 -PGLPGLSGQKGDGGLPGIPGNP-----------------GLPGPKGEPGFHGFPGVQGP 1236

Query: 204  GMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGG--GGGGG 261
                         G PGS  P     +G P  Q    PG  RPG  G  G  G  G GG 
Sbjct: 1237 ------------PGPPGSPGPALEGPKGNPGPQ--GPPG--RPGLPGPEGPPGLPGNGGI 1280

Query: 262  SGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQG-GGM 320
             G  G  G  G  G                       G  G     G+  +P + G  GM
Sbjct: 1281 KGEKGNPGQPGLPGL---------------------PGLKGDQGPPGLQGNPGRPGLNGM 1319

Query: 321  MMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYP 380
               PG  G              GF    G +  P  A P                    P
Sbjct: 1320 KGDPGLPGVP------------GFPGMKGPSGVPGSAGPE-----------------GEP 1350

Query: 381  EYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSH 440
                P  PP  P  P  Q+      AG        GL    G Q     P          
Sbjct: 1351 GLIGPPGPPGLPG-PSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPG--------- 1400

Query: 441  PAMSPGTPG----PTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPG 496
            P   PG PG    P    + G   DP         G+   P ++     P P G  GPPG
Sbjct: 1401 PTGPPGDPGRNGLPGFDGAGGRKGDP---------GLPGQPGTRGLDGPPGPDGLQGPPG 1451

Query: 497  P 497
            P
Sbjct: 1452 P 1452



 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 165/699 (23%), Positives = 217/699 (31%), Gaps = 154/699 (22%)

Query: 230 EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAA 289
           EG+P       PG+  P    G  G  G  G  G  G  G  G  G              
Sbjct: 56  EGHPG-----LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMP 110

Query: 290 AAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAG 349
              G  G  G  G +   G    P   G   + GP G       K   GS         G
Sbjct: 111 GHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSII--MSSLPG 168

Query: 350 QNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQ 409
              +P    P   Q L  P+ +    G   P       PP PP  P            G 
Sbjct: 169 PKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPP--GLMGPPGPPGLP------------GP 214

Query: 410 QAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQ 469
           +   G+      G +           Q    P   PG PG      Q  P+D    K  Q
Sbjct: 215 KGNMGLNFQGPKGEK---------GEQGLQGP---PGPPGQIS--EQKRPIDVEFQKGDQ 260

Query: 470 LYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWK 529
             G+  +      +  P P G  GPPGP           PG   G +  Q +        
Sbjct: 261 --GLPGD------RGPPGPPGIRGPPGP-----------PGGEKGEKGEQGE-------- 293

Query: 530 ETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQE 589
                 P + G+ G  G          + QP  P LP    Y P +      P +D  ++
Sbjct: 294 ------PGKRGKPGKDGE---------NGQPGIPGLPGDPGY-PGE------PGRD-GEK 330

Query: 590 GYGTRSQPPLAPGK--PNHEDLNLIQQERPSSLPDLSGSIDDL-------PTGTEATLSS 640
           G    + PP  PG   P       I ++    LP L G   +        P G      +
Sbjct: 331 GQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPPGA 390

Query: 641 AVSAS-------GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPS-PSPVGSPVGSNQSR 692
           AV          G    +GD+  P  S   P   P L   PG P  P P G P G +   
Sbjct: 391 AVMGPPGPPGFPGERGQKGDEGPPGISIPGP---PGLDGQPGAPGLPGPPG-PAGPHIPP 446

Query: 693 SGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQT 752
           S  I     PG   PP PPGS  +           +  E+G + G + +      G   +
Sbjct: 447 SDEICE---PG---PPGPPGSPGDKG---------LQGEQG-VKGDKGDTCFNCIGTGIS 490

Query: 753 GPSMSPH----PSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSAS 808
           GP   P     P P G +       ++  +  T        GP+G    P A  G P   
Sbjct: 491 GPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGAT--------GPKGLPGIPGA-PGAPGFP 541

Query: 809 YSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSA----GMQNRPFP-GNMSSMT---- 859
            S   PG  ++       +G     GA  L  +P      G+   P P G    +T    
Sbjct: 542 GSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGE 601

Query: 860 ---PSSPGM-------SQQGGPGMGPPMPTVNRKAQEAA 888
              P +PG+          G PG GPP P   +  Q  A
Sbjct: 602 RGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVA 640



 Score = 46.2 bits (108), Expect = 4e-04
 Identities = 63/230 (27%), Positives = 70/230 (30%), Gaps = 38/230 (16%)

Query: 79   NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDE----------- 127
            +  L G  G    PGP  E   HG        G    PGP L    G+            
Sbjct: 1206 DGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGL 1265

Query: 128  --DDAPPKMGEPAG--------GRYEHPGLGALGTQQPPVAVPGGGGGPA---------- 167
               + PP +    G        G+   PGL  L   Q P  + G  G P           
Sbjct: 1266 PGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGL 1325

Query: 168  -AVPEFNNYYG-SAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPL 225
              VP F    G S  P S GP G  G      G    PG           AG PG   P 
Sbjct: 1326 PGVPGFPGMKGPSGVPGSAGPEGEPG-LIGPPGPPGLPGPSGQSIIIKGDAGPPGI--PG 1382

Query: 226  QNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGG 275
            Q   +G P  Q     G   P    G  G  G  G  G GG  G  G  G
Sbjct: 1383 QPGLKGLPGPQGPQ--GLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPG 1430



 Score = 40.4 bits (93), Expect = 0.019
 Identities = 69/295 (23%), Positives = 92/295 (31%), Gaps = 36/295 (12%)

Query: 633 GTEATLSSAVSASGSTSSQGDQSNPA-------QSPFSPHASPHLSSIPGGPSPSPVGSP 685
           G++   S      G     G + +P        + P  P        IPG P P  +  P
Sbjct: 35  GSKCDCSGIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGP 94

Query: 686 VGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGF--MAGTQRNPQ 743
            G       P     +PG       PG Q     +    +   P   GF  + G    P 
Sbjct: 95  PGLPGFPGTP----GLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPG 150

Query: 744 MAQYGPQQTGPSMSPHPSP-GGQMHAGISSFQ-QSNSSGTYGPQMSQYGPQGNYSRPPAY 801
           +     +     MS  P P G   + G    Q     +G  GP     GP G    PP  
Sbjct: 151 IPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGP----IGPPG----PPGL 202

Query: 802 SGVPSASYSGPGPGM-GISANNQMHGQGPSQPCGAV----PLGRMPSAGMQNRPFPGNMS 856
            G P     GP PG+ G   N  ++ QGP    G      P G       Q RP      
Sbjct: 203 MGPP-----GP-PGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQ 256

Query: 857 SMTPSSPG-MSQQGGPGM-GPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGM 909
                 PG     G PG+ GPP P    K ++             +  +   PG+
Sbjct: 257 KGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGI 311


>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
            sapiens]
          Length = 1688

 Score = 91.7 bits (226), Expect = 7e-18
 Identities = 211/866 (24%), Positives = 276/866 (31%), Gaps = 145/866 (16%)

Query: 82   LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDE-------------D 128
            L G  G    PGP      H    D     +  PPGPP    PGD+             D
Sbjct: 424  LDGQPGAPGLPGPPGPAGPHIPPSDEIC--EPGPPGPP--GSPGDKGLQGEQGVKGDKGD 479

Query: 129  DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG--------GGGGPAAVPEFNNYYGSAA 180
                 +G    G    PGL  L      +  PG        G  GP  +P      G  A
Sbjct: 480  TCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPG--A 537

Query: 181  PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMD-PLQNSHEGYPNSQCNH 239
            P   G  G  G      G +   G       S  A G PG    P Q+   G P  +   
Sbjct: 538  PGFPGSKGEPGDILTFPGMKGDKG----ELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEP 593

Query: 240  ----YPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
                + G   P    G  G  G  G  G  G G     G  G   VA            G
Sbjct: 594  GGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKG 653

Query: 296  GGG------------GYGGSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLSKAAAGSAAG 342
              G            G  G     G+   P   G   + G PG  G   +         G
Sbjct: 654  DPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPG 713

Query: 343  --GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGG--SYPEYSSPSAPPPPPSQPQSQ 398
              GF    G    P GA  T  ++     P    + G    P ++ P  PP PP  P  +
Sbjct: 714  PKGFPGIPG----PPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPG-PPGPPGLPGFK 768

Query: 399  AAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGS 458
             A       G     G   G+  G               +  P   PG PG  +    G 
Sbjct: 769  GALGPKGDRGFPGPPGPP-GRT-GLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGP 826

Query: 459  PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSY--GPPGPQRYPIGIQGRTPGAMAGMQ 516
            P  P  + +P L+G+        ++  P P G    GPPG +  P GI G  PG +    
Sbjct: 827  PGIPGPIGQPGLHGIPG------EKGDPGPPGLDVPGPPGERGSP-GIPG-APGPIGPPG 878

Query: 517  YPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQY--LPS 574
             P       A+        P   G+ G+ G             P P  +P ++    L  
Sbjct: 879  SPGLPGKAGASG------FPGTKGEMGMMGP---------PGPPGPLGIPGRSGVPGLKG 923

Query: 575  QSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGT 634
                + QP         G++ +P L PG P   D NL+  +     P L G         
Sbjct: 924  DDGLQGQPGLPGPTGEKGSKGEPGL-PGPPGPMDPNLLGSKGEKGEPGLPG--------- 973

Query: 635  EATLSSAVSASGSTSSQGDQSNPAQS-------PFSPHASPHLSSIPGGPSPSPVGSPVG 687
               +       G     GD   P  S       P  P  +P L   PG   P  +   +G
Sbjct: 974  ---IPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIG 1030

Query: 688  SN-----QSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNP 742
                   Q   GP  P+ +PG    P  PG + +    P +S   +P     + G +  P
Sbjct: 1031 DMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGD-PGISSIGLPG----LPGPKGEP 1085

Query: 743  QMAQYGPQQTG-------PSMSPHP-SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGN 794
             +  Y P   G       P +   P +PG +   G+  F      GT GP     GP+G 
Sbjct: 1086 GLPGY-PGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFP-----GTPGPP----GPKG- 1134

Query: 795  YSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPS-AGMQNRPF-P 852
             S PP   G+P      PGP  G     Q    GP    G      +P  AG +  P  P
Sbjct: 1135 ISGPPGNPGLPGE----PGPVGGGGHPGQ---PGPPGEKGKPGQDGIPGPAGQKGEPGQP 1187

Query: 853  GNMSSMTPSSPGMSQQGGPGMGPPMP 878
            G  +   P  PG+S Q G G  P +P
Sbjct: 1188 GFGNPGPPGLPGLSGQKGDGGLPGIP 1213



 Score = 90.9 bits (224), Expect = 1e-17
 Identities = 196/791 (24%), Positives = 242/791 (30%), Gaps = 159/791 (20%)

Query: 92   PGPDMEQPQHGGAKDSAAGGQADPPGPP----LLSKPGDEDDAPPKMGEPAGGRYEHPGL 147
            PGP       G        G   PPGPP    L   PG + D  P  G+P  G    PGL
Sbjct: 759  PGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPN-GQP--GPMGPPGL 815

Query: 148  GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM 207
              +G Q PP   P G  GP   P  +   G      G PG          G + SPG+  
Sbjct: 816  PGIGVQGPPG--PPGIPGPIGQPGLHGIPGE----KGDPGPPGLDVPGPPGERGSPGI-- 867

Query: 208  MHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG--GGSGGG 265
                     GAPG + P        P S     PG   PG  G  G  G  G  G  G  
Sbjct: 868  --------PGAPGPIGP--------PGS-----PGL--PGKAGASGFPGTKGEMGMMGPP 904

Query: 266  GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPG 325
            G  G  G  G                 G  G  G  GS    G+   P      ++   G
Sbjct: 905  GPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKG 964

Query: 326  GGGAASLSKAAAGSAAGGFQRFAGQNQHPS-GATPTL--------------NQLLTSPSP 370
              G   L      S   G+Q   G    P     P L                 L  P  
Sbjct: 965  EKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPG 1024

Query: 371  MMRSYGG-SYPEYSSPSAPPPP---PSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYA 426
            +  + G   +P       PP P   P QP S          G    + +GL    G +  
Sbjct: 1025 LKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGE 1084

Query: 427  AASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSP 486
               P +            PG PG      +GS  DP       L G+   P ++ Q   P
Sbjct: 1085 PGLPGY------------PGNPG-----IKGSVGDP------GLPGLPGTPGAKGQPGLP 1121

Query: 487  YPGGSYGPPGPQRY--PIGIQG--RTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQ 542
               G+ GPPGP+    P G  G    PG + G  +P Q        K      P Q G  
Sbjct: 1122 GFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGK------PGQDGIP 1175

Query: 543  GVSGYCQQGQQPYYSQQPQPPHLP-----------PQAQYLPSQSQQRYQP--------- 582
            G +G   +  QP +   P PP LP           P     P     + +P         
Sbjct: 1176 GPAGQKGEPGQPGFG-NPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQ 1234

Query: 583  -------QQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTE 635
                       + EG      P   PG+P  +   L   E P  LP   G   +     +
Sbjct: 1235 GPPGPPGSPGPALEGPKGNPGPQGPPGRPGFQ--GLPGPEGPPGLPGNGGIKGEKGNPGQ 1292

Query: 636  ATLSSAVSASGSTSSQGDQSNPAQSPFS-PHASPHLSSIPGGPS-PSPVGSPVGSNQSRS 693
              L       G     G Q NP +   +     P L  +PG P    P G P        
Sbjct: 1293 PGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVP-------- 1344

Query: 694  GPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTG 753
            G   P   PG   PP PPG    S     +     P       G +  P     GPQ  G
Sbjct: 1345 GSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLP-----GPQ--G 1397

Query: 754  PSMSPHPS--PGGQMHAGISSFQ-------------QSNSSGTYGPQMSQYGPQGNYSRP 798
            P   P P+  PG     G+  F              Q  + G  GP     GP G    P
Sbjct: 1398 PQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPP----GPDG-LQGP 1452

Query: 799  PAYSGVPSASY 809
            P   G  S ++
Sbjct: 1453 PGPPGTSSVAH 1463



 Score = 73.2 bits (178), Expect = 3e-12
 Identities = 212/887 (23%), Positives = 263/887 (29%), Gaps = 186/887 (20%)

Query: 84  GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP----LLSKPGD--EDDAPPKMGEP 137
           GA G    PG +  + + G        G   PPGPP    +  +PG       P   G P
Sbjct: 114 GAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNP 173

Query: 138 AGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
                 +PG   +     P  +PG  G P          G   P   GP G  GP  +  
Sbjct: 174 G-----YPGPPGIQGLPGPTGIPGPIGPPGPP-------GLMGPP--GPPGLPGPKGNMG 219

Query: 198 GGQQSPGMGMMHSASAAAAGAPGSMDP--------LQNSHEGYPNSQCNHYPGYSRPGAG 249
              Q P             G PG +           Q   +G P  +    P    PG  
Sbjct: 220 LNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGP----PGIR 275

Query: 250 GGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV 309
           G  G  GG  G  G  G  G  G  G                 G  G  G  G     G 
Sbjct: 276 GPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGD 335

Query: 310 LSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPS 369
              P   G  +++   G G     K   G    G     G+   P    P          
Sbjct: 336 TGPPGPPG--LVIPRPGTGITIGEKGNIGLP--GLPGEKGERGFPGIQGPP--------- 382

Query: 370 PMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAAS 429
                 G   P  ++   PP PP  P  +         G       GL    GA      
Sbjct: 383 ------GLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGP 436

Query: 430 PAWAAAQ-QRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYG---------MGSNPHS 479
           P  A      S     PG PGP      GSP D  +     + G         +G+    
Sbjct: 437 PGPAGPHIPPSDEICEPGPPGPP-----GSPGDKGLQGEQGVKGDKGDTCFNCIGTGISG 491

Query: 480 QPQQSS----PYPGGSYGPPGPQRY--------PIGIQGRTPGAMAGMQYPQQQ-DSGDA 526
            P Q      P P GS G PG +          P G+ G  PGA     +P  + + GD 
Sbjct: 492 PPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPG-IPGAPGAPGFPGSKGEPGDI 550

Query: 527 TWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLP--PQAQYLPSQSQQRYQPQQ 584
               TF  M    G+ G  G             P  P LP  P    LP     + +P  
Sbjct: 551 L---TFPGMKGDKGELGSPG------------APGLPGLPGTPGQDGLPGLPGPKGEPGG 595

Query: 585 DMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDL---------PTGTE 635
              +   G    PP  PG                 LP L G+I  +         P G E
Sbjct: 596 ITFKGERG----PPGNPG-----------------LPGLPGNIGPMGPPGFGPPGPVG-E 633

Query: 636 ATLSSAVSASGSTSSQGDQSNPAQSPFSPH-----------------ASPHLSSIPGGPS 678
             +       G     G + +P Q+   P                    P L   PG P 
Sbjct: 634 KGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPG 693

Query: 679 -PSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSE--SSSHPALSQSPMPQ-ERGF 734
            P   G P        GP  P   PG   PP  PG+         P     P P+ E GF
Sbjct: 694 IPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGF 753

Query: 735 -MAGTQRNPQMAQY----GPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQY 789
            + G    P +  +    GP+  G    P P PG     G+         G  GP   Q 
Sbjct: 754 ALPGPPGPPGLPGFKGALGPK--GDRGFPGP-PGPPGRTGLDGL--PGPKGDVGPN-GQP 807

Query: 790 GPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHG----QGPSQPCG---AVPLGRMP 842
           GP G    PP   G+      GP    G      +HG    +G   P G     P G   
Sbjct: 808 GPMG----PPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERG 863

Query: 843 SAGMQNRPFPGNMSSMTPSSPGMSQQGG----PG-------MGPPMP 878
           S G+   P P       P SPG+  + G    PG       MGPP P
Sbjct: 864 SPGIPGAPGPIG----PPGSPGLPGKAGASGFPGTKGEMGMMGPPGP 906



 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 105/419 (25%), Positives = 120/419 (28%), Gaps = 120/419 (28%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
            G GG   QPGP  E+ + G        GQ   PG P    PG                  
Sbjct: 1152 GGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGP----------------- 1194

Query: 144  HPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSP 203
             PGL  L  Q+    +PG  G P                 G PG +  P F    G Q P
Sbjct: 1195 -PGLPGLSGQKGDGGLPGIPGNP-----------------GLPGPKGEPGFHGFPGVQGP 1236

Query: 204  GMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSG 263
                         G PGS  P     +G P  Q    PG  RPG  G  G  G  G    
Sbjct: 1237 ------------PGPPGSPGPALEGPKGNPGPQ--GPPG--RPGFQGLPGPEGPPGLPGN 1280

Query: 264  GGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQG-GGMMM 322
            GG  G     G  G                  G  G  G     G+  +P + G  GM  
Sbjct: 1281 GGIKGEKGNPGQPGL----------------PGLPGLKGDQGPPGLQGNPGRPGLNGMKG 1324

Query: 323  GPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEY 382
             PG  G              GF    G +  P  A P                    P  
Sbjct: 1325 DPGLPGVP------------GFPGMKGPSGVPGSAGPE-----------------GEPGL 1355

Query: 383  SSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPA 442
              P  PP  P  P  Q+      AG        GL    G Q     P          P 
Sbjct: 1356 IGPPGPPGLPG-PSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPG---------PT 1405

Query: 443  MSPGTPG----PTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGP 497
              PG PG    P    + G   DP         G+   P ++     P P G  GPPGP
Sbjct: 1406 GPPGDPGRNGLPGFDGAGGRKGDP---------GLPGQPGTRGLDGPPGPDGLQGPPGP 1455



 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 165/699 (23%), Positives = 217/699 (31%), Gaps = 154/699 (22%)

Query: 230 EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAA 289
           EG+P       PG+  P    G  G  G  G  G  G  G  G  G              
Sbjct: 56  EGHPG-----LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMP 110

Query: 290 AAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAG 349
              G  G  G  G +   G    P   G   + GP G       K   GS         G
Sbjct: 111 GHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSII--MSSLPG 168

Query: 350 QNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQ 409
              +P    P   Q L  P+ +    G   P       PP PP  P            G 
Sbjct: 169 PKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPP--GLMGPPGPPGLP------------GP 214

Query: 410 QAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQ 469
           +   G+      G +           Q    P   PG PG      Q  P+D    K  Q
Sbjct: 215 KGNMGLNFQGPKGEK---------GEQGLQGP---PGPPGQIS--EQKRPIDVEFQKGDQ 260

Query: 470 LYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWK 529
             G+  +      +  P P G  GPPGP           PG   G +  Q +        
Sbjct: 261 --GLPGD------RGPPGPPGIRGPPGP-----------PGGEKGEKGEQGE-------- 293

Query: 530 ETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQE 589
                 P + G+ G  G          + QP  P LP    Y P +      P +D  ++
Sbjct: 294 ------PGKRGKPGKDGE---------NGQPGIPGLPGDPGY-PGE------PGRD-GEK 330

Query: 590 GYGTRSQPPLAPGK--PNHEDLNLIQQERPSSLPDLSGSIDDL-------PTGTEATLSS 640
           G    + PP  PG   P       I ++    LP L G   +        P G      +
Sbjct: 331 GQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPPGA 390

Query: 641 AVSAS-------GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPS-PSPVGSPVGSNQSR 692
           AV          G    +GD+  P  S   P   P L   PG P  P P G P G +   
Sbjct: 391 AVMGPPGPPGFPGERGQKGDEGPPGISIPGP---PGLDGQPGAPGLPGPPG-PAGPHIPP 446

Query: 693 SGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQT 752
           S  I     PG   PP PPGS  +           +  E+G + G + +      G   +
Sbjct: 447 SDEICE---PG---PPGPPGSPGDKG---------LQGEQG-VKGDKGDTCFNCIGTGIS 490

Query: 753 GPSMSPH----PSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSAS 808
           GP   P     P P G +       ++  +  T        GP+G    P A  G P   
Sbjct: 491 GPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGAT--------GPKGLPGIPGA-PGAPGFP 541

Query: 809 YSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSA----GMQNRPFP-GNMSSMT---- 859
            S   PG  ++       +G     GA  L  +P      G+   P P G    +T    
Sbjct: 542 GSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGE 601

Query: 860 ---PSSPGM-------SQQGGPGMGPPMPTVNRKAQEAA 888
              P +PG+          G PG GPP P   +  Q  A
Sbjct: 602 RGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVA 640



 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 72/267 (26%), Positives = 85/267 (31%), Gaps = 46/267 (17%)

Query: 79   NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPA 138
            +  L G  G    PGP  E   HG        G   PPGPP    PG   + P     P 
Sbjct: 1206 DGGLPGIPGNPGLPGPKGEPGFHG------FPGVQGPPGPP--GSPGPALEGPKGNPGPQ 1257

Query: 139  G--GRYEHPGLGALGTQQPPVAVPGGGG--------GPAAVPEFNNYYGSAAPAS-GGPG 187
            G  GR   PG   L   + P  +PG GG        G   +P      G   P    G  
Sbjct: 1258 GPPGR---PGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNP 1314

Query: 188  GRAGPCFDQHGGQQSPGMGMM--HSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSR 245
            GR G     +G +  PG+  +         +G PGS  P     EG P            
Sbjct: 1315 GRPG----LNGMKGDPGLPGVPGFPGMKGPSGVPGSAGP-----EGEPGL-------IGP 1358

Query: 246  PGAGGGGGGGG------GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGG 299
            PG  G  G  G      G  G  G  G  G  G  G                 G  G  G
Sbjct: 1359 PGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPG 1418

Query: 300  YGGSSAGYGVLSSPRQQGGGMMMGPGG 326
            + G+    G    P Q G   + GP G
Sbjct: 1419 FDGAGGRKGDPGLPGQPGTRGLDGPPG 1445



 Score = 40.4 bits (93), Expect = 0.019
 Identities = 69/295 (23%), Positives = 92/295 (31%), Gaps = 36/295 (12%)

Query: 633 GTEATLSSAVSASGSTSSQGDQSNPA-------QSPFSPHASPHLSSIPGGPSPSPVGSP 685
           G++   S      G     G + +P        + P  P        IPG P P  +  P
Sbjct: 35  GSKCDCSGIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGP 94

Query: 686 VGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGF--MAGTQRNPQ 743
            G       P     +PG       PG Q     +    +   P   GF  + G    P 
Sbjct: 95  PGLPGFPGTP----GLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPG 150

Query: 744 MAQYGPQQTGPSMSPHPSP-GGQMHAGISSFQ-QSNSSGTYGPQMSQYGPQGNYSRPPAY 801
           +     +     MS  P P G   + G    Q     +G  GP     GP G    PP  
Sbjct: 151 IPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGP----IGPPG----PPGL 202

Query: 802 SGVPSASYSGPGPGM-GISANNQMHGQGPSQPCGAV----PLGRMPSAGMQNRPFPGNMS 856
            G P     GP PG+ G   N  ++ QGP    G      P G       Q RP      
Sbjct: 203 MGPP-----GP-PGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQ 256

Query: 857 SMTPSSPG-MSQQGGPGM-GPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGM 909
                 PG     G PG+ GPP P    K ++             +  +   PG+
Sbjct: 257 KGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGI 311



 Score = 33.5 bits (75), Expect = 2.4
 Identities = 87/354 (24%), Positives = 111/354 (31%), Gaps = 58/354 (16%)

Query: 1101 GEEPPPEVFSTGDTKKQPKLQ----PPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPT 1156
            G+   P +  T   K QP L      P P     + GP  P + G      +PG+  P  
Sbjct: 1101 GDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGP--PGNPG------LPGEPGPVG 1152

Query: 1157 PASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMP 1216
                P     P + G+     +  P     +   P   +  P  P   G+S     G +P
Sbjct: 1153 GGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGN--PGPPGLPGLSGQKGDGGLP 1210

Query: 1217 YEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGAS 1276
              P      G +  PG       QG            + P G     G   R  F     
Sbjct: 1211 GIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGF----- 1265

Query: 1277 YDRRHEPYGQQYPGQGPPSGQPPYGG--------HQPGLYPQQPNYKRHMDGMYGPPAKR 1328
                     Q  PG   P G P  GG         QPGL P  P  K    G  GPP   
Sbjct: 1266 ---------QGLPGPEGPPGLPGNGGIKGEKGNPGQPGL-PGLPGLK----GDQGPPG-- 1309

Query: 1329 HEGDMYNMQYSSQQQEMYNQYG--GSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIP 1386
                   +Q +  +  +    G  G    P    ++G    P S      PG I   G P
Sbjct: 1310 -------LQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPG-P 1361

Query: 1387 PQMMGGPLQSSSSEG----PQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMN 1436
            P + G   QS   +G    P          +P P Q  QG  GPT  P  PG N
Sbjct: 1362 PGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGP-QGPQGLPGPTGPPGDPGRN 1414


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 91.7 bits (226), Expect = 7e-18
 Identities = 202/933 (21%), Positives = 300/933 (32%), Gaps = 139/933 (14%)

Query: 87   GGAPQPGPDMEQPQHGGAKDSAAGGQADP-----PGPPLLSKPGDEDDAPPKMGEPAGGR 141
            GG   P P            S  GG A P     P PP ++ P       PK G PA   
Sbjct: 975  GGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPS------PK-GSPAATP 1027

Query: 142  YEHPGLGALGTQQPPVAVPGGG-GGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQ 200
            +        G   PP A P    G PAA P          PA+  P  + GP      G 
Sbjct: 1028 FPK------GASTPPAATPPSPKGSPAATPLPKG--APTTPAATLPSPKGGPATPSLKGA 1079

Query: 201  QSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGG 260
             +P               P +  P        P+ +    P  + P +  GG       G
Sbjct: 1080 PTP---------------PAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKG 1124

Query: 261  GSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVL--SSPRQQGG 318
                      +  GG        A    AA      GG       G      ++P    G
Sbjct: 1125 APTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKG 1184

Query: 319  GMMMGPGGGGAASLSKAAAGSAAGGFQRFA--GQNQHPSGATPTLNQLLTSPSPMMRSYG 376
            G+   P   GA +   A   S  GG    +  G    P+   P+    L +PSP     G
Sbjct: 1185 GLAT-PSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPK----G 1239

Query: 377  GSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAA--SPAWAA 434
                  ++P +P   P+ P  + A    AA       G+      GA   A    P+   
Sbjct: 1240 APTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKG 1299

Query: 435  AQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGP 494
                S P  +P  P  T    +GSP  P                  P + +P P  +  P
Sbjct: 1300 GPATSPPKGAPTPPAATPPSPKGSPGTP------------------PPKGAPTPP-AVTP 1340

Query: 495  PGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQP 554
            P P+  P  +   TP +  G   P  ++             PP        G       P
Sbjct: 1341 PSPKGTPT-LPATTPSSKGGPTTPSSKEGPT----------PPAATPSHKGGPAMTPPSP 1389

Query: 555  YYSQQ-PQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQ 613
                  P P   P     +P   ++   P   +++EG  T S+  L P  P    ++L +
Sbjct: 1390 KRGPAIPSPKGDPTSPAVIPLSPKKA--PATPVTREGAATPSKGDLTP--PAVTPVSLKK 1445

Query: 614  QERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSI 673
                S+           P G  AT           SS+GD + PA +P SP   P    +
Sbjct: 1446 APATSA-----------PKGGPAT----------PSSKGDPTLPAVTPPSPKEPPAPKQV 1484

Query: 674  PGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG 733
                SP            +  P +PA +    +P   P S  E  + P+  + P+     
Sbjct: 1485 ATSSSP------------KKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTAT 1532

Query: 734  FMAG---TQRNPQMAQYGPQQTGPSMSPHPS-PGGQMHAGISSFQQSNSSGTYGPQMSQY 789
             ++        P+ A   P  T PS    P+ P  +      S ++++S     P   + 
Sbjct: 1533 LLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKG 1592

Query: 790  GPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNR 849
             P       P     PS   +   P +   +  +    GP+ P         P      +
Sbjct: 1593 APSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEK----GPATPAPKGTPTSPPVTPSSLK 1648

Query: 850  PFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGM 909
              P + +S+T        Q   G+         K    A A       +A +R+G     
Sbjct: 1649 DSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGP---- 1704

Query: 910  NQSGLMASSSPYSQP----MNNSSSLMNTQAPPYSMAPAMVNSSAASVGL------ADMM 959
             Q+   +++SP   P     N S   ++T AP   + P   +SS  + G          +
Sbjct: 1705 -QTKKSSATSPPICPDPSAKNGSKGPLSTVAPA-PLLPVQKDSSKTAKGKDASHSPKGPL 1762

Query: 960  SPGESKLPLPLKADGKEEGTPQPESKSKKSSSS 992
            +P ESK   PL A   E+  P+PES S  ++ S
Sbjct: 1763 APPESKASTPLTAAAFEKVLPKPESASVSAAPS 1795



 Score = 75.1 bits (183), Expect = 7e-13
 Identities = 209/971 (21%), Positives = 315/971 (32%), Gaps = 204/971 (21%)

Query: 621  PDLSGSIDDLPT------GTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIP 674
            P L G++   P       GT  TL    +AS +        N      +   +P +    
Sbjct: 675  PFLEGTVSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSPQNTCAPLATLVLAPEIPKSV 734

Query: 675  GGPSPSPVGSPVGSNQ----SRSGPISPASIPGSQMPPQPPGSQSESSSHPA---LSQSP 727
              PS  P G+P G+ +    S +  ++P +    + P +  G+ + +SS      L+ SP
Sbjct: 735  PSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSP 794

Query: 728  MPQERGFMAGTQRNP-QMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQM 786
             P        T+R P +    GP     ++S   SP        +SF   NS    G   
Sbjct: 795  SPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVE------ASFLPENSLSFQG--- 845

Query: 787  SQYGPQGNYS-RPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAG 845
            S+  P   +S  PP+  G P+ S   P    G++                +P    P+  
Sbjct: 846  SKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVT----------------LPPKETPTPS 889

Query: 846  MQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGS 905
            + N PFP                     GP  P     A + A A+   +++  ++R   
Sbjct: 890  VVNLPFPKE-------------------GPATP-----APKQAPALSMTSSSPKKARATP 925

Query: 906  FPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSP-GES 964
             P     G+ AS SP   P   +++  + +  P + +P    +  A    A   SP G  
Sbjct: 926  AP----KGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPA----ATPPSPKGGP 977

Query: 965  KLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEE 1024
              P P  A      TP P  K   ++ S         V                 T    
Sbjct: 978  ATPSPKGAPTPPAATP-PSPKGGPATPSPKGAPTPPAV-----------------TPPSP 1019

Query: 1025 RGSPVSS-LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSL 1083
            +GSP ++  P     P                A    + K    AT L  G  ++ A++L
Sbjct: 1020 KGSPAATPFPKGASTP---------------PAATPPSPKGSPAATPLPKGAPTTPAATL 1064

Query: 1084 KKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSN 1143
                            +G   PP       T   PK  P +P+  G+   P     +   
Sbjct: 1065 PSP----KGGPATPSLKGAPTPPAA-----TPPSPKGGPATPSPKGAPMPPAATPPSPKG 1115

Query: 1144 SMAEVPGDLKPPTPASTP----HGQMTPMQGGRSSTISVHDP-----FSDVSDSSFPKRN 1194
             +A  P    P TPA+TP     G  TP   G  +T +   P      +       P   
Sbjct: 1116 GLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTP 1175

Query: 1195 SMTPNAPYQQGMSMPDVMG--RMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMY 1252
            + TP +P + G++ P   G    P      P GG+        P  T    P S    + 
Sbjct: 1176 AATPPSP-KGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAP-TTPAATPPSPKGGLA 1233

Query: 1253 NQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQP 1312
              SP GA +                     P       +G P+  PP G   P      P
Sbjct: 1234 TPSPKGAPTT--------------------PAATPPSPKGGPATPPPKGAPTPPA-ATPP 1272

Query: 1313 NYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQ-------- 1364
            + K    G+  PP K           S +     +   G+ + P   P   +        
Sbjct: 1273 SLK---GGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPP 1329

Query: 1365 --YPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQG 1422
               P P +       G        P   GGP   SS EGP             P      
Sbjct: 1330 KGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTP-----------PAATPSH 1378

Query: 1423 PGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITR----PP 1478
             GGP   PP P         +P  + +  S  P+ +    P     A   P+TR     P
Sbjct: 1379 KGGPAMTPPSPKRGPA----IPSPKGDPTS--PAVI----PLSPKKAPATPVTREGAATP 1428

Query: 1479 QPSYQTPPSL-PNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGP 1537
                 TPP++ P  + +AP+ +          +P   P  PS K     PT+P   VT P
Sbjct: 1429 SKGDLTPPAVTPVSLKKAPATS----------APKGGPATPSSKGD---PTLPA--VTPP 1473

Query: 1538 PPQPPPIRREI 1548
             P+ PP  +++
Sbjct: 1474 SPKEPPAPKQV 1484



 Score = 70.5 bits (171), Expect = 2e-11
 Identities = 215/1020 (21%), Positives = 327/1020 (32%), Gaps = 168/1020 (16%)

Query: 617  PSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS------PFSPHASPHL 670
            P    D +G       GT    ++A      T S   +++P +       P  P AS   
Sbjct: 649  PLESADPAGVAPTTAKGTSTYTTTASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTAS--- 705

Query: 671  SSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQ--PPGSQ-----SESSSHPAL 723
             + P  PSP    +P+ +      P  P S+P   +PP   PPG++     S +S+   +
Sbjct: 706  ENCPVAPSPQNTCAPLATLVL--APEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPV 763

Query: 724  SQSPM--PQERGFMAGTQRNPQMAQY---GPQQTGPSMSPHPSPGGQMHAGISSFQQSNS 778
            + SP   P E    + T  +     Y    P   G S+SP               +    
Sbjct: 764  ASSPKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTK------------RPPTK 811

Query: 779  SGTYGPQMSQYGPQGNYSRPPA---YSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGA 835
             G+ GP      P GN S P +    S +P  S S  G     +     H   P  P GA
Sbjct: 812  KGSAGPDT----PIGNLSSPVSPVEASFLPENSLSFQGSKDSPATT---HSPTPPSPKGA 864

Query: 836  VPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAA 895
                  PSA     P    +      +P +     P  GP  P     A + A A+   +
Sbjct: 865  PT----PSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATP-----APKQAPALSMTS 915

Query: 896  ANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGL 955
            ++  ++R    P     G+ AS SP   P   +++  + +  P + +P    +  A+   
Sbjct: 916  SSPKKARATPAP----KGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPP 971

Query: 956  ADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWV 1015
            +    P     P P  A      TP P  K   ++ S         V             
Sbjct: 972  SPKGGPAT---PSPKGAPTPPAATP-PSPKGGPATPSPKGAPTPPAV------------- 1014

Query: 1016 DRYLTFMEERGSPVSS-LPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVG 1074
                T    +GSP ++  P     P                A    + K    AT L  G
Sbjct: 1015 ----TPPSPKGSPAATPFPKGASTPP---------------AATPPSPKGSPAATPLPKG 1055

Query: 1075 TSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGP 1134
              ++ A++L                +G   PP       T   PK  P +P+  G+   P
Sbjct: 1056 APTTPAATLPSPK----GGPATPSLKGAPTPPAA-----TPPSPKGGPATPSPKGAPMPP 1106

Query: 1135 QTPQSTGSNSMAEVPGDLKPPTPASTPH----GQMTPMQGGRSSTISVHDP-----FSDV 1185
                 +    +A  P    P TPA+TP     G  TP   G  +T +   P      +  
Sbjct: 1107 AATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATP 1166

Query: 1186 SDSSFPKRNSMTPNAPYQQGMSMPDVMGR--MPYEPNKDPFGGMRKVPGSSEPFMTQGQM 1243
                 P   + TP +P + G++ P   G    P      P GG+        P  T    
Sbjct: 1167 PPKGAPTTPAATPPSP-KGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAP-TTPAAT 1224

Query: 1244 PNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGH 1303
            P S    +   SP GA +                     P       +G P+  PP G  
Sbjct: 1225 PPSPKGGLATPSPKGAPTT--------------------PAATPPSPKGGPATPPPKGAP 1264

Query: 1304 QPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQG 1363
             P      P+ K    G+  PP K           S +     +   G+ + P   P   
Sbjct: 1265 TPPA-ATPPSLK---GGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSP 1320

Query: 1364 Q----------YPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARND- 1412
            +           P P +       G        P   GGP   SS EGP        +  
Sbjct: 1321 KGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKG 1380

Query: 1413 --MPYPYQNRQGPGGPTQA--PPYPGMNRTDDMMVPDQRINHE-SQWPSHVSQRQPYMS- 1466
                 P   ++GP  P+    P  P +        P   +  E +  PS      P ++ 
Sbjct: 1381 GPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTP 1440

Query: 1467 -----SSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPSMK 1521
                 + A+  P   P  PS +  P+LP     +P      + +    SP K+P  P+  
Sbjct: 1441 VSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPM 1500

Query: 1522 MQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRV 1581
                +P V  S      P  P  RR+   P  ++ +     K    +  K+ + P A  V
Sbjct: 1501 GAPTLPAVIPSS-PKEVPATPSSRRDPIAPTATLLSK----KTPATLAPKEALIPPAMTV 1555



 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 122/518 (23%), Positives = 176/518 (33%), Gaps = 82/518 (15%)

Query: 380  PEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRS 439
            P  +    PP P   P   A    +  G             +   +    PA  A +Q  
Sbjct: 850  PATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQA- 908

Query: 440  HPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQR 499
             PA+S  +  P   R+  +P    +   P   G  + P + P    P P G    P P+ 
Sbjct: 909  -PALSMTSSSPKKARATPAPKG--IPASPSPKGAPTPPAATP----PSPKGGPATPSPKW 961

Query: 500  YPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQ 559
             P      TP A      P     G AT        PP        G       P     
Sbjct: 962  AP------TPPAAT----PPSPKGGPATPSPKGAPTPPAATPPSPKG---GPATPSPKGA 1008

Query: 560  PQPPHL-PPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPS 618
            P PP + PP  +  P+ +     P+        G  + P   P  P            P+
Sbjct: 1009 PTPPAVTPPSPKGSPAATPF---PK--------GASTPPAATPPSPKGS---------PA 1048

Query: 619  SLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGP- 677
            + P   G+    PT   ATL S      + S +G  + PA +P SP   P   S  G P 
Sbjct: 1049 ATPLPKGA----PTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPM 1104

Query: 678  -----SPSPVGSPVGSNQSRSGPISPASIP----GSQMPPQPPGSQSESSSHP-----AL 723
                  PSP G  + +   +  P +PA+ P    G    P P G+ +  ++ P      L
Sbjct: 1105 PPAATPPSPKGG-LATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGL 1163

Query: 724  SQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSP---HPSPGGQMHAGISSFQQSNSSG 780
            +  P        A T  +P+     P   G   +P    PSP G    G+++     +  
Sbjct: 1164 ATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG----GLATPSPKGAPT 1219

Query: 781  TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 840
            T  P  +   P+G  +  P+  G P+   + P    G  A     G  P+ P    P   
Sbjct: 1220 T--PAATPPSPKGGLA-TPSPKGAPTTPAATPPSPKGGPATPPPKG-APTPPAATPP--- 1272

Query: 841  MPSAGMQNRPFPG--NMSSMTPSSPGMSQQGGPGMGPP 876
                G+   P  G  N + +TP SP    +GGP   PP
Sbjct: 1273 SLKGGLATPPHKGAPNPAVVTPPSP----KGGPATSPP 1306



 Score = 45.4 bits (106), Expect = 6e-04
 Identities = 114/534 (21%), Positives = 176/534 (32%), Gaps = 69/534 (12%)

Query: 1104 PPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPA---ST 1160
            PPP+   T      P   PPSP    +   P+   +T + +     G L  P+P    +T
Sbjct: 1166 PPPKGAPT-----TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTT 1220

Query: 1161 PHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTP---NAPYQQGMSMPDVMGRMPY 1217
            P       +GG ++      P +  +    PK    TP    AP     + P + G +  
Sbjct: 1221 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLAT 1280

Query: 1218 EPNK-----------DPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMG 1266
             P+K            P GG    P    P       P S         P GA +   + 
Sbjct: 1281 PPHKGAPNPAVVTPPSPKGGPATSPPKGAP-TPPAATPPSPKGSPGTPPPKGAPTPPAVT 1339

Query: 1267 QRQQFPYGASYDRRHEPYGQQYP-------GQGPPSGQPPYGGHQPGLYPQQPNYKRHMD 1319
                 P G        P  +  P       G  PP+  P + G  P + P  P     + 
Sbjct: 1340 PPS--PKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGG-PAMTPPSPKRGPAIP 1396

Query: 1320 GMYGPPAKRHEGDMYNMQYSSQ---QQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQG 1376
               G P       +   +  +    ++       G  + P   P+  +   P +     G
Sbjct: 1397 SPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKA-PATSAPKGG 1455

Query: 1377 PGQIQTHGIP---------PQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPT 1427
            P    + G P         P+    P Q ++S  P++   A    M  P      P  P 
Sbjct: 1456 PATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAP-ATPAPMGAPTLPAVIPSSPK 1514

Query: 1428 QAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQ--PSYQTP 1485
            + P  P   R  D + P   +         +S++ P  ++ A  + +  P    PS +  
Sbjct: 1515 EVPATPSSRR--DPIAPTATL---------LSKKTP--ATLAPKEALIPPAMTVPSPKKT 1561

Query: 1486 PSLPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTV----PTSQVTGPPPQP 1541
            P++P       +P+S + S    ++PS     PS K   + P V    P    T P   P
Sbjct: 1562 PAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTP 1621

Query: 1542 P-PIRREITFPPGSVEASQPVLKQRRK--ITSKDIVTPEAWRVMMSLKSGLLAE 1592
            P P +   T  P     S PV     K   TS   VT +    +     GL A+
Sbjct: 1622 PSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAK 1675



 Score = 43.9 bits (102), Expect = 0.002
 Identities = 274/1278 (21%), Positives = 410/1278 (32%), Gaps = 220/1278 (17%)

Query: 365  LTSPSPMMRSYGGSYPEYSSPSAPP------PPPSQPQSQAAAAGAAA----GGQQAAAG 414
            L  P P   S G + P  ++P AP        PP  P + A A+   A    G   ++A 
Sbjct: 78   LEVPFPQSSS-GTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLKGTPSSSAP 136

Query: 415  MGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMG 474
            + L   +       S A+      S P+++    G  +  S  +P+ P   K        
Sbjct: 137  LALVA-LAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLS--APIAPSEPK-------- 185

Query: 475  SNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKET--- 531
            +N +  P +  P P G+  PP      +     TP  MA +Q      SG A+  +T   
Sbjct: 186  TNLNKVPSEVVPNPKGTPSPPCIVS-TVPYHCVTP--MASIQ------SGVASLPQTTPT 236

Query: 532  --FWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQE 589
                +  PQ     +S      Q P  S   + P  PP A  L +QS     P    SQ+
Sbjct: 237  TTLAIASPQVKDTTISSVLISPQNPG-SLSLKGPVSPPAALSLSTQSL----PVVTSSQK 291

Query: 590  GYGTRSQP--PLAPGK---PNHED----LNLIQQERPSSLPDLSGSIDDLPTGTEATLSS 640
              G  + P  P++ G    P H+     + L+ Q  PS+L D           T  T+S 
Sbjct: 292  TAGPNTPPDFPISLGSHLAPLHQSSFGSVQLLGQTGPSALSD----------PTVKTISV 341

Query: 641  AVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPAS 700
              S++G+       S P+Q    P        +P   +  PV +P        GP + +S
Sbjct: 342  DHSSTGA-------SYPSQRSVIPPLPSRNEVVPATVAAFPVVAP----SVDKGPSTISS 390

Query: 701  IPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHP 760
            I  S     P GS + ++S  +LS +     +     T   P +AQ      G +     
Sbjct: 391  ITCS-----PSGSLNVATSF-SLSPTTSLILKSSPNATYHYPLVAQMPVSSVGTTPLVVT 444

Query: 761  SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISA 820
            +P     A  ++F+ +       P MS  GP  N   P + + +  A  +   P   ++ 
Sbjct: 445  NPCTIAAAPTTTFEVATC---VSPPMSS-GPISNIE-PTSPAALVMAPVAPKEPSTQVAT 499

Query: 821  NNQMHGQGPSQPCGAVP--LGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMP 878
              ++    P  P    P  L  +PS+ +   P   ++ ++  S      +G P   P   
Sbjct: 500  TLRI----PVSPPLPDPEDLKNLPSSVLVKFPTQKDLQTVPASL-----EGAP-FSPAQA 549

Query: 879  TVNRKAQEAAAAVMQAAANSAQSRQG--SFPGMNQS----------------GLMASSSP 920
             +  K       ++QAA  ++ S Q   S P +  S                G  ASS  
Sbjct: 550  GLTTKKDPTVLPLVQAAPKNSPSFQSTSSSPEIPLSPEATLAKKSLGEPLPIGKPASSMT 609

Query: 921  YSQPMNNSSSLMNTQ--APPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKE-- 976
                +N+S+S++ T   A P S  P + +S       A  +   +     P  A G    
Sbjct: 610  SPLGVNSSASVIKTDSYAGPDSAGPLLKSSLITPTVAAFPLESADPAGVAPTTAKGTSTY 669

Query: 977  --------EGTPQPESKSKKSSSSTTTGEKITKVYE----LGNEPERKLWVDRYLTFMEE 1024
                    EGT     K+      T T   +         +   P+        L    E
Sbjct: 670  TTTASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSPQNTCAPLATLVLAPE 729

Query: 1025 --RGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASS 1082
              +  P  SLP  G  P          K++ G++  +                S ++A++
Sbjct: 730  IPKSVPSPSLPPAGTPP--------GTKKVDGISHTSALAPVASSPKECPTEDSGASATA 781

Query: 1083 LKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANS---GSLQGPQTPQS 1139
              K  + YL          + P P   S     K+P  +  S       G+L  P +P  
Sbjct: 782  SSKGTLTYL---------ADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVE 832

Query: 1140 TG---SNSMA-----EVPGDLKPPTPASTPHGQMTPMQGGRSSTISV-----HDPFSDVS 1186
                  NS++     + P     PTP S P G  TP      S   V       P   V 
Sbjct: 833  ASFLPENSLSFQGSKDSPATTHSPTPPS-PKGAPTPSAVTPLSPKGVTLPPKETPTPSVV 891

Query: 1187 DSSFPKRNSMTP---NAPYQQGMSMPDVMGRMPYEPNKDPFG----GMRKVPGSSEPFMT 1239
            +  FPK    TP    AP     S      R    P   P      G    P ++ P   
Sbjct: 892  NLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPK 951

Query: 1240 QGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPP 1299
             G  P +         P+    +   G     P GA       P     P  GP +  P 
Sbjct: 952  GG--PATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATP---PSPKGGPATPSPK 1006

Query: 1300 YGGHQPGLYPQQPN----YKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSG 1355
                 P + P  P           G   PPA        +   +   +        +   
Sbjct: 1007 GAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPS 1066

Query: 1356 PDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPY 1415
            P   P       P  +     P        PP   GGP   S    P          MP 
Sbjct: 1067 PKGGPAT-----PSLKGAPTPPA-----ATPPSPKGGPATPSPKGAP----------MP- 1105

Query: 1416 PYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPIT 1475
            P      P G    PP+ G   T     P  +    +  P             A   P  
Sbjct: 1106 PAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPP-----------KGAPTTPAA 1154

Query: 1476 RPPQP--SYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQ 1533
             PP P     TPP      + A +P S +  L    SP  +P  P+       P  P   
Sbjct: 1155 TPPSPKGGLATPPPKGAPTTPAATPPSPKGGLAT-PSPKGAPTTPA-----ATPPSPKGG 1208

Query: 1534 VTGPPPQPPPIRREITFP 1551
            +  P P+  P     T P
Sbjct: 1209 LATPSPKGAPTTPAATPP 1226


>gi|62122917 filaggrin family member 2 [Homo sapiens]
          Length = 2391

 Score = 91.3 bits (225), Expect = 1e-17
 Identities = 206/877 (23%), Positives = 278/877 (31%), Gaps = 139/877 (15%)

Query: 102  GGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEH-PGLGALGTQQPPVAVP 160
            G      +GGQ    G P  S P  +  +    G    G+ ++  G    G+ Q      
Sbjct: 324  GQGHGCVSGGQPSGCGQPE-SNPCSQSYSQRGYGARENGQPQNCGGQWRTGSSQSSCCGQ 382

Query: 161  GGGGGPAAVPEFNNYYGSAAPASG-------------GPGGRAGPCFDQHGG--QQSPGM 205
             G GG  +     + YGS    S              G G      F+QHG    QS G 
Sbjct: 383  YGSGGSQSCSNGQHEYGSCGRFSNSSSSNEFSKCDQYGSGSSQSTSFEQHGTGLSQSSGF 442

Query: 206  GMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGG-GGGGGGSGG 264
                  S    G           HE    S  +   GY + G+  G   G G  G GSG 
Sbjct: 443  EQHVCGSGQTCG----------QHE----STSSQSLGYDQHGSSSGKTSGFGQHGSGSGQ 488

Query: 265  GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV------LSSPRQQGG 318
              G G  G+G   +       + +  ++G G  G   G S+G+G        SS  Q G 
Sbjct: 489  SSGFGQCGSGSGQSSGFGQHGSVSGQSSGFGQHGSVSGQSSGFGQHESRSRQSSYGQHGS 548

Query: 319  GMMMGPGGG-------------GAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
            G     G G             G  S      G    G  + +G  QH SG+     Q  
Sbjct: 549  GSSQSSGYGQYGSRETSGFGQHGLGSGQSTGFGQYGSGSGQSSGFGQHGSGS----GQSS 604

Query: 366  TSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ--------AAAAGAAAGGQQAAAGMGL 417
                   RS   SY ++SS S+      Q  S+         + +  + G  Q  +G G 
Sbjct: 605  GFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQ 664

Query: 418  GKDMGAQYAAASPAWAAAQQRSHPAMSP-GTPGPTMGRSQGSPMDPMVMKRPQLYGMGSN 476
                G   + +  +    Q  S    S  G  G   G SQ S          Q  G G +
Sbjct: 665  SSGFGQHVSGSGQSSGFGQHESRSGHSSYGQHG--FGSSQSSGYGQHGSSSGQTSGFGQH 722

Query: 477  PHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKE--TFWL 534
              S  Q SS    G +G    Q    G  G   G  +G    + + SG +++ +  +   
Sbjct: 723  ELSSGQSSS---FGQHGSGSGQSSGFGQHGSGSGQSSGFGQHESR-SGQSSYGQHSSGSS 778

Query: 535  MPPQYGQQG---VSGYCQQGQQP--------YYSQQPQPP----HLPPQAQYLPSQSQQR 579
                YGQ G    SG+ Q G           Y S   Q      H     Q       + 
Sbjct: 779  QSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQSAGFGQHGSGSGQSSGFGQHES 838

Query: 580  YQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLS 639
               Q    Q G G+           +    +   Q R SS            +G  +   
Sbjct: 839  RSHQSSYGQHGSGSSQSSGYGQHGSSSGQTSGFGQHRSSSGQYSGFGQHGSGSGQSSGFG 898

Query: 640  SAVSASGSTSSQGD-QSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISP 698
               + SG  S  G  +S   QS +  H S    S   G   S  G   G  Q RSG    
Sbjct: 899  QHGTGSGQYSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTFGFGQHRSGS--- 955

Query: 699  ASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSP 758
                G        GS S  SS     +S   +  GF     R+ Q + YG   +G S S 
Sbjct: 956  ----GQSSGFGQHGSGSGQSSGFGQHESGSGKSSGFGQHESRSSQ-SNYGQHGSGSSQSS 1010

Query: 759  ----HPSPGGQ------------MHAGI----SSFQQSNSSGTYGP---QMSQYGPQGNY 795
                H S  GQ             ++G     S   QS+  G +G    Q S +G   + 
Sbjct: 1011 GYGQHGSSSGQTTGFGQHRSSSGQYSGFGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESR 1070

Query: 796  SRPPAYS--GVPSASYSGPG----------------PGMGISANNQMHGQGPSQPCGAVP 837
            SR  +Y   G  S+  SG G                PG G S+    +G G  Q  G   
Sbjct: 1071 SRQSSYGQHGSGSSQSSGYGQHGSNSGQTSGFGQHRPGSGQSSGFGQYGSGSGQSSGFGQ 1130

Query: 838  --LGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPG 872
               G   S+G     +    SS      G SQ  G G
Sbjct: 1131 HGSGTGKSSGFAQHEYRSGQSSYGQHGTGSSQSSGCG 1167



 Score = 87.8 bits (216), Expect = 1e-16
 Identities = 204/921 (22%), Positives = 291/921 (31%), Gaps = 137/921 (14%)

Query: 60   QQQQQQQQQQQQQQHPISNNNSLG--------GAGGGAPQPGPDMEQP----QHGGAKDS 107
            Q +    Q     QH  S+  + G        G   G  Q G    Q     QHG     
Sbjct: 455  QHESTSSQSLGYDQHGSSSGKTSGFGQHGSGSGQSSGFGQCGSGSGQSSGFGQHGSVSGQ 514

Query: 108  AAG-GQ-ADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGG 165
            ++G GQ     G        +        G+   G  +  G G  G+++        G G
Sbjct: 515  SSGFGQHGSVSGQSSGFGQHESRSRQSSYGQHGSGSSQSSGYGQYGSRETS-GFGQHGLG 573

Query: 166  PAAVPEFNNYYGSAAPASG----GPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGS 221
                  F  Y   +  +SG    G G      F QH  +        HS+ ++ +   G 
Sbjct: 574  SGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQSSGYGQ 633

Query: 222  MDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAV 281
                Q S  G   S  +   G+ + G+G G   G G      G   G G     +G  + 
Sbjct: 634  HGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQSSGFGQHVSGSGQSSGFGQHESRSGHSSY 693

Query: 282  AAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA 341
                  ++ ++G G  G   G ++G+G      +   G     G  G+ S   +  G   
Sbjct: 694  GQHGFGSSQSSGYGQHGSSSGQTSGFG----QHELSSGQSSSFGQHGSGSGQSSGFGQHG 749

Query: 342  GGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQS-QAA 400
             G  + +G  QH S                 RS   SY ++SS S+      Q  S Q +
Sbjct: 750  SGSGQSSGFGQHES-----------------RSGQSSYGQHSSGSSQSSGYGQHGSRQTS 792

Query: 401  AAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPM 460
              G    G   + G G       QY + S   A   Q    +      G    RS  S  
Sbjct: 793  GFGQHGSGSSQSTGFG-------QYGSGSGQSAGFGQHGSGSGQSSGFGQHESRSHQSSY 845

Query: 461  DPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQ 520
                      +G GS+      QSS Y  G +G    Q    G    + G  +G     Q
Sbjct: 846  GQ--------HGSGSS------QSSGY--GQHGSSSGQTSGFGQHRSSSGQYSGFG---Q 886

Query: 521  QDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRY 580
              SG              +GQ G       GQ   + Q     H     Q+    SQ   
Sbjct: 887  HGSGSG--------QSSGFGQHGTGS----GQYSGFGQHESRSHQSSYGQHGSGSSQS-- 932

Query: 581  QPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSS 640
                     GYG         G  + +     Q    S      G      +G  +    
Sbjct: 933  --------SGYGQH-------GSSSGQTFGFGQHRSGSGQSSGFGQHGS-GSGQSSGFGQ 976

Query: 641  AVSASGSTSSQGD-QSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPA 699
              S SG +S  G  +S  +QS +  H S    S   G   S  G   G  Q RS      
Sbjct: 977  HESGSGKSSGFGQHESRSSQSNYGQHGSGSSQSSGYGQHGSSSGQTTGFGQHRSSS---- 1032

Query: 700  SIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSP- 758
               G        GS S+ SS      +   Q  GF     R+ Q + YG   +G S S  
Sbjct: 1033 ---GQYSGFGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESRSRQ-SSYGQHGSGSSQSSG 1088

Query: 759  ---HPSPGGQMHAGISSFQ----QSNSSGTYGP---QMSQYGPQGN-------YSRPPAY 801
               H S  GQ  +G    +    QS+  G YG    Q S +G  G+       +++    
Sbjct: 1089 YGQHGSNSGQT-SGFGQHRPGSGQSSGFGQYGSGSGQSSGFGQHGSGTGKSSGFAQHEYR 1147

Query: 802  SGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLG--RMPSAGMQNRPFPGNMSSMT 859
            SG  S    G G            G GP+   G    G     S+G Q+    G  +   
Sbjct: 1148 SGQSSYGQHGTGSSQSSGCGQHESGSGPTTSFGQHVSGSDNFSSSG-QHISDSGQSTGFG 1206

Query: 860  PSSPGMSQQGGPGMGPPM-----PTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGL 914
                G  Q  G G G         TV+ + +      +    +S QS QG      Q+G 
Sbjct: 1207 QYGSGSGQSTGLGQGESQQVESGSTVHGRQETTHGQTINTTRHS-QSGQGQ---STQTGS 1262

Query: 915  MASSSPYSQPMNNSSSLMNTQ 935
              +    S    NS S ++++
Sbjct: 1263 RVTRRRRSSQSENSDSEVHSK 1283



 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 156/780 (20%), Positives = 245/780 (31%), Gaps = 91/780 (11%)

Query: 60   QQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP 119
            Q      Q     QH     +  G  G G+ Q      Q   G  + S  G      G  
Sbjct: 620  QHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQ-STGFGQYGSGSGQSSGFGQHVSGSGQS 678

Query: 120  LLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSA 179
                  +        G+   G  +  G G  G+     +  G     +        +GS 
Sbjct: 679  SGFGQHESRSGHSSYGQHGFGSSQSSGYGQHGSSSGQTSGFGQHELSSGQSSSFGQHGSG 738

Query: 180  APASGG-----PGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPN 234
            +  S G      G      F QH  +        HS+ ++ +   G     Q S  G   
Sbjct: 739  SGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHG 798

Query: 235  SQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
            S  +   G+ + G+G G   G G  G   G   G G     +   +     + ++ ++G 
Sbjct: 799  SGSSQSTGFGQYGSGSGQSAGFGQHGSGSGQSSGFGQHESRSHQSSYGQHGSGSSQSSGY 858

Query: 295  GGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHP 354
            G  G   G ++G+G      +   G   G G  G+ S   +  G    G  +++G  QH 
Sbjct: 859  GQHGSSSGQTSGFG----QHRSSSGQYSGFGQHGSGSGQSSGFGQHGTGSGQYSGFGQHE 914

Query: 355  SGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQA----------AAAGA 404
            S                 RS+  SY ++ S S+      Q  S +          + +G 
Sbjct: 915  S-----------------RSHQSSYGQHGSGSSQSSGYGQHGSSSGQTFGFGQHRSGSGQ 957

Query: 405  AAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSP-GTPGPTMGRSQGSPMDPM 463
            ++G  Q  +G G     G   + +  +    Q  S  + S  G  G   G SQ S     
Sbjct: 958  SSGFGQHGSGSGQSSGFGQHESGSGKSSGFGQHESRSSQSNYGQHG--SGSSQSSGYGQH 1015

Query: 464  VMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGM-QYPQQQD 522
                 Q  G G +  S  Q S     G +G    Q    G  G   G  +G  QY  +  
Sbjct: 1016 GSSSGQTTGFGQHRSSSGQYSG---FGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESRSR 1072

Query: 523  SGDATWKETFWLMPPQYGQQG-----VSGYCQQGQQP-----YYSQQPQPPHLPPQAQYL 572
                            YGQ G      SGY Q G        +   +P         QY 
Sbjct: 1073 QS-------------SYGQHGSGSSQSSGYGQHGSNSGQTSGFGQHRPGSGQSSGFGQYG 1119

Query: 573  PSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPT 632
                Q          Q G GT      A  +      +  Q    SS     G   +  +
Sbjct: 1120 SGSGQ-----SSGFGQHGSGTGKSSGFAQHEYRSGQSSYGQHGTGSSQSSGCGQ-HESGS 1173

Query: 633  GTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSR 692
            G   +    VS S + SS G            H S    S   G   S  G   G  Q  
Sbjct: 1174 GPTTSFGQHVSGSDNFSSSGQ-----------HISDSGQSTGFGQYGSGSGQSTGLGQGE 1222

Query: 693  SGPI-SPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQ 751
            S  + S +++ G Q   +    Q+ +++  + S      + G     +R    ++    +
Sbjct: 1223 SQQVESGSTVHGRQ---ETTHGQTINTTRHSQSGQGQSTQTGSRVTRRRRSSQSENSDSE 1279

Query: 752  TGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSG 811
                +S   S    +H    S    + S     Q + +G +G+ +R   +SG   ++ +G
Sbjct: 1280 VHSKVSHRHSE--HIHTQAGSHYPKSGSTVRRRQGTTHGQRGDTTR-HGHSGHGQSTQTG 1336



 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 196/871 (22%), Positives = 278/871 (31%), Gaps = 116/871 (13%)

Query: 177  GSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ 236
            GS+   SG  G R+  C    G   S G G   +AS++           Q+   G   +Q
Sbjct: 264  GSSCSGSGDSGRRSHAC----GYSNSSGCGRPQNASSSC----------QSHRFGGQGNQ 309

Query: 237  CNHYPGYSRPGAGGGGGGGGGGGGGSGGGGG-------------GGGAGAGGA--GAGAV 281
             ++     + G  GG G G   GG   G G              G GA   G     G  
Sbjct: 310  FSYIQSGCQSGIKGGQGHGCVSGGQPSGCGQPESNPCSQSYSQRGYGARENGQPQNCGGQ 369

Query: 282  AAAAAAAAAAAGGGGGGGYGGSSAG---YGVLSSPRQQGGGMMMGP----GGGGAASLSK 334
                ++ ++  G  G GG    S G   YG                    G G + S S 
Sbjct: 370  WRTGSSQSSCCGQYGSGGSQSCSNGQHEYGSCGRFSNSSSSNEFSKCDQYGSGSSQSTSF 429

Query: 335  AAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQ 394
               G+   G  + +G  QH  G+  T  Q  ++ S  +      Y ++ S S       Q
Sbjct: 430  EQHGT---GLSQSSGFEQHVCGSGQTCGQHESTSSQSL-----GYDQHGSSSGKTSGFGQ 481

Query: 395  PQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGR 454
                 + +G ++G  Q  +G G     G   + +  +    Q  S    S G  G    R
Sbjct: 482  ---HGSGSGQSSGFGQCGSGSGQSSGFGQHGSVSGQSSGFGQHGSVSGQSSGF-GQHESR 537

Query: 455  SQGSPMDPMVMKRPQLYGMGSNPHSQPQ----------QSSPYPGGSYGPPGPQRYPIGI 504
            S+ S          Q  G G     +            QS+ +  G YG    Q    G 
Sbjct: 538  SRQSSYGQHGSGSSQSSGYGQYGSRETSGFGQHGLGSGQSTGF--GQYGSGSGQSSGFGQ 595

Query: 505  QGRTPGAMAGMQYPQQQDSGDATWKE--TFWLMPPQYGQQG---VSGYCQQGQQP----- 554
             G   G  +G    + + SG +++ +  +       YGQ G    SG+ Q G        
Sbjct: 596  HGSGSGQSSGFGQHESR-SGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQSTG 654

Query: 555  ---YYSQQPQPP----HLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHE 607
               Y S   Q      H+    Q       +         Q G+G+           +  
Sbjct: 655  FGQYGSGSGQSSGFGQHVSGSGQSSGFGQHESRSGHSSYGQHGFGSSQSSGYGQHGSSSG 714

Query: 608  DLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGD-QSNPAQSPFSPHA 666
              +   Q   SS    S       +G  +      S SG +S  G  +S   QS +  H+
Sbjct: 715  QTSGFGQHELSSGQSSSFGQHGSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHS 774

Query: 667  SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQS 726
            S    S   G   S   S  G + S S   +     GS         Q  S S       
Sbjct: 775  SGSSQSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQSAGFGQHGSGSG------ 828

Query: 727  PMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQM 786
               Q  GF     R+ Q + YG   +G S S      G      S F Q  SS       
Sbjct: 829  ---QSSGFGQHESRSHQ-SSYGQHGSGSSQSSGYGQHGSSSGQTSGFGQHRSSSGQYSGF 884

Query: 787  SQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQ--MHGQGPSQPCGAVPLGRMPSA 844
             Q+G     S      G  S  YSG G     S  +    HG G SQ  G    G   S+
Sbjct: 885  GQHGSGSGQSSGFGQHGTGSGQYSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHG--SSS 942

Query: 845  GM-----QNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSA 899
            G      Q+R   G  S       G  Q  G G        +      ++   Q  + S+
Sbjct: 943  GQTFGFGQHRSGSGQSSGFGQHGSGSGQSSGFGQ-------HESGSGKSSGFGQHESRSS 995

Query: 900  QSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMM 959
            QS      G + SG  + SS Y Q  + SSS   T    +  +    +   +  G     
Sbjct: 996  QSNY----GQHGSG-SSQSSGYGQ--HGSSSGQTTGFGQHRSS----SGQYSGFGQHGSG 1044

Query: 960  SPGESKLPLPLKADGKEEGTPQPESKSKKSS 990
            S   S         G+  G  Q ES+S++SS
Sbjct: 1045 SDQSSGFGQHGTGSGQSSGFGQYESRSRQSS 1075



 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 146/676 (21%), Positives = 210/676 (31%), Gaps = 79/676 (11%)

Query: 694  GPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG--FMAGTQRNPQMAQYGPQQ 751
            G +S     G   P   P SQS S       ++  PQ  G  +  G+ ++    QYG   
Sbjct: 328  GCVSGGQPSGCGQPESNPCSQSYSQRGYGARENGQPQNCGGQWRTGSSQSSCCGQYG--- 384

Query: 752  TGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSG 811
            +G S S   S G   +     F  S+SS  +  +  QYG   + S           S+  
Sbjct: 385  SGGSQSC--SNGQHEYGSCGRFSNSSSSNEFS-KCDQYGSGSSQS----------TSFEQ 431

Query: 812  PGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGM-QNRPFPGNMSSMTPSSPGMSQQGG 870
             G G+  S+  + H  G  Q CG        S G  Q+    G  S       G  Q  G
Sbjct: 432  HGTGLSQSSGFEQHVCGSGQTCGQHESTSSQSLGYDQHGSSSGKTSGFGQHGSGSGQSSG 491

Query: 871  PGM-GPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSS 929
             G  G      +   Q  + +   +      S  G   G  Q    +  S Y Q  + SS
Sbjct: 492  FGQCGSGSGQSSGFGQHGSVSGQSSGFGQHGSVSGQSSGFGQHESRSRQSSYGQHGSGSS 551

Query: 930  SLMNTQAPPYSMAPAMVNSSAASVGLADMMSPG----------ESKLPLPLKADGKEEGT 979
                 Q+  Y    +   S     GL    S G           S         G+  G 
Sbjct: 552  -----QSSGYGQYGSRETSGFGQHGLGSGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGF 606

Query: 980  PQPESKSKKSS-SSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKK 1038
             Q ES+S +SS    ++G   +  Y  G    R+       +   + GS  S     G+ 
Sbjct: 607  GQHESRSGQSSYGQHSSGSSQSSGY--GQHGSRQT------SGFGQHGSGSSQSTGFGQY 658

Query: 1039 PLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKI 1098
                 +     + + G  Q +              G     + S    Y Q+ F      
Sbjct: 659  GSGSGQSSGFGQHVSGSGQSS--------------GFGQHESRSGHSSYGQHGFGSSQSS 704

Query: 1099 ERGEEPPPEVFSTGDTKK--QPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPT 1156
              G+       S+G T    Q +L     ++ G   G  + QS+G        G      
Sbjct: 705  GYGQHGS----SSGQTSGFGQHELSSGQSSSFGQ-HGSGSGQSSGFGQHGSGSGQ----- 754

Query: 1157 PASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMP 1216
              S+  GQ     G   S+   H   S  S S + +  S   +   Q G       G   
Sbjct: 755  --SSGFGQHESRSG--QSSYGQHSSGSSQS-SGYGQHGSRQTSGFGQHGSGSSQSTGFGQ 809

Query: 1217 YEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGAS 1276
            Y        G  +    S      GQ  + S Q  Y Q  SG+  + G GQ        S
Sbjct: 810  YGSGSGQSAGFGQHGSGSGQSSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTS 869

Query: 1277 YDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNM 1336
               +H     QY G     GQ   G  Q   + Q         G     ++ H+      
Sbjct: 870  GFGQHRSSSGQYSG----FGQHGSGSGQSSGFGQHGTGSGQYSGFGQHESRSHQSSYGQH 925

Query: 1337 QYSSQQQEMYNQYGGS 1352
               S Q   Y Q+G S
Sbjct: 926  GSGSSQSSGYGQHGSS 941



 Score = 34.3 bits (77), Expect = 1.4
 Identities = 43/151 (28%), Positives = 57/151 (37%), Gaps = 23/151 (15%)

Query: 1224 FGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQ---RQQFPYG--ASYD 1278
            FG      G S  F   GQ  + S Q  Y Q  SG+  + G GQ   RQ   +G   S  
Sbjct: 745  FGQHGSGSGQSSGF---GQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGS 801

Query: 1279 RRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQY 1338
             +   +GQ   G G  +G   +G H  G   Q   + +H        ++ H+        
Sbjct: 802  SQSTGFGQYGSGSGQSAG---FGQHGSG-SGQSSGFGQH-------ESRSHQSSYGQHGS 850

Query: 1339 SSQQQEMYNQYG---GSYSG-PDRRPIQGQY 1365
             S Q   Y Q+G   G  SG    R   GQY
Sbjct: 851  GSSQSSGYGQHGSSSGQTSGFGQHRSSSGQY 881



 Score = 34.3 bits (77), Expect = 1.4
 Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 9/78 (11%)

Query: 1224 FGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEP 1283
            FG      G S  F   GQ  + S Q  Y Q  SG+  + G GQ        S   +   
Sbjct: 1051 FGQHGTGSGQSSGF---GQYESRSRQSSYGQHGSGSSQSSGYGQH------GSNSGQTSG 1101

Query: 1284 YGQQYPGQGPPSGQPPYG 1301
            +GQ  PG G  SG   YG
Sbjct: 1102 FGQHRPGSGQSSGFGQYG 1119



 Score = 33.9 bits (76), Expect = 1.8
 Identities = 53/208 (25%), Positives = 60/208 (28%), Gaps = 41/208 (19%)

Query: 1224 FGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEP 1283
            FG    V G S  F   GQ  + S Q  Y Q         G G  Q   YG    R    
Sbjct: 518  FGQHGSVSGQSSGF---GQHESRSRQSSYGQH--------GSGSSQSSGYGQYGSRETSG 566

Query: 1284 YGQQYPGQGPPSGQPPYG---GHQPGLYPQ------------------QPNYKRHMDGM- 1321
            +GQ   G G  +G   YG   G   G                      Q +Y +H  G  
Sbjct: 567  FGQHGLGSGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSS 626

Query: 1322 ----YGPPAKRHEGDMYNMQYSSQQQEMYNQYG---GSYSGPDRRPI-QGQYPYPYSRER 1373
                YG    R           S Q   + QYG   G  SG  +     GQ       E 
Sbjct: 627  QSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQSSGFGQHVSGSGQSSGFGQHES 686

Query: 1374 MQGPGQIQTHGIPPQMMGGPLQSSSSEG 1401
              G      HG       G  Q  SS G
Sbjct: 687  RSGHSSYGQHGFGSSQSSGYGQHGSSSG 714



 Score = 33.5 bits (75), Expect = 2.4
 Identities = 38/144 (26%), Positives = 54/144 (37%), Gaps = 29/144 (20%)

Query: 743  QMAQYGPQQTGPSMSPHP-SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAY 801
            Q  Q G +  G   S H  S   ++H+G+S    ++S  TYG   SQ+G  G        
Sbjct: 2089 QSTQRGSRTAGRRGSGHSESSDSEVHSGVS---HTHSGHTYGQARSQHGESG-------- 2137

Query: 802  SGVPSASYSGPGPGMGISANNQMHGQ---GPSQPCGAVPLGRMPSAGMQNR--------- 849
                SA +   G   G + +   HGQ   G S   G+   GR  S+  ++          
Sbjct: 2138 ----SAIHGRQGTIHGQTGDTTRHGQSGHGQSTQTGSRTTGRQRSSHSESSDSEVHSEAS 2193

Query: 850  -PFPGNMSSMTPSSPGMSQQGGPG 872
                G+  S   S  G S   G G
Sbjct: 2194 PTHSGHTHSQAGSRHGQSGSSGHG 2217



 Score = 33.1 bits (74), Expect = 3.1
 Identities = 44/151 (29%), Positives = 54/151 (35%), Gaps = 23/151 (15%)

Query: 1224 FGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEP 1283
            FG      G S  F   GQ  + S Q  Y Q  SG+  + G GQ        S   +   
Sbjct: 974  FGQHESGSGKSSGF---GQHESRSSQSNYGQHGSGSSQSSGYGQH------GSSSGQTTG 1024

Query: 1284 YGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGM-----YGPPAKRHEGDMYNMQY 1338
            +GQ     G  SG   +G H  G   Q   + +H  G      +G    R     Y    
Sbjct: 1025 FGQHRSSSGQYSG---FGQHGSG-SDQSSGFGQHGTGSGQSSGFGQYESRSRQSSYGQHG 1080

Query: 1339 S-SQQQEMYNQYG---GSYSG-PDRRPIQGQ 1364
            S S Q   Y Q+G   G  SG    RP  GQ
Sbjct: 1081 SGSSQSSGYGQHGSNSGQTSGFGQHRPGSGQ 1111



 Score = 32.0 bits (71), Expect = 6.8
 Identities = 48/178 (26%), Positives = 57/178 (32%), Gaps = 33/178 (18%)

Query: 1246 SSMQDMYNQ--SPSGAMSNLGM-----GQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQP 1298
            SS    Y Q  S SG  S  G      GQ   F    S   +   +GQ   G G  SG  
Sbjct: 700  SSQSSGYGQHGSSSGQTSGFGQHELSSGQSSSFGQHGSGSGQSSGFGQHGSGSGQSSG-- 757

Query: 1299 PYGGHQPGLYPQQPNYKRHMDGM-----YGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSY 1353
             +G H+      Q +Y +H  G      YG    R           S Q   + QYG   
Sbjct: 758  -FGQHES--RSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGS 814

Query: 1354 ----------SGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEG 1401
                      SG  +    GQ+    SR      GQ   HG       G  Q  SS G
Sbjct: 815  GQSAGFGQHGSGSGQSSGFGQHE---SRSHQSSYGQ---HGSGSSQSSGYGQHGSSSG 866



 Score = 32.0 bits (71), Expect = 6.8
 Identities = 49/196 (25%), Positives = 63/196 (32%), Gaps = 44/196 (22%)

Query: 1241 GQMPNSSMQDMYNQSPSGAMSNLGMGQR-----QQFPYG---------------ASYDRR 1280
            GQ  + S Q  Y Q  SG+  + G GQ      Q F +G                S   +
Sbjct: 911  GQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTFGFGQHRSGSGQSSGFGQHGSGSGQ 970

Query: 1281 HEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGM-----YGPPAKRHEGDMYN 1335
               +GQ   G G  SG   +G H+      Q NY +H  G      YG       G    
Sbjct: 971  SSGFGQHESGSGKSSG---FGQHES--RSSQSNYGQHGSGSSQSSGYGQHGS-SSGQTTG 1024

Query: 1336 MQYSSQQQEMYNQYGGSYSGPDRRPIQGQ----------YPYPYSRERMQGPGQIQTHGI 1385
                      Y+ +G   SG D+    GQ          +    SR R    GQ   HG 
Sbjct: 1025 FGQHRSSSGQYSGFGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESRSRQSSYGQ---HGS 1081

Query: 1386 PPQMMGGPLQSSSSEG 1401
                  G  Q  S+ G
Sbjct: 1082 GSSQSSGYGQHGSNSG 1097


>gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma)
           [Homo sapiens]
          Length = 526

 Score = 91.3 bits (225), Expect = 1e-17
 Identities = 95/314 (30%), Positives = 120/314 (38%), Gaps = 79/314 (25%)

Query: 58  QQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPG 117
           Q   QQ  Q   QQ     S +    G G  +           +G ++++  G Q+ P G
Sbjct: 23  QGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSS--------YSSYGQSQNTGYGTQSTPQG 74

Query: 118 PPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYG 177
                  G    +    G+ +     +PG G    QQP  +   G             YG
Sbjct: 75  YGSTGGYGSSQSSQSSYGQQSS----YPGYG----QQPAPSSTSGS------------YG 114

Query: 178 SAAPASGGPGGRAGPCFDQ--HGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNS 235
           S++ +S     ++G    Q  +GGQQ             + G   S +P Q    GY   
Sbjct: 115 SSSQSSSYGQPQSGSYSQQPSYGGQQQ------------SYGQQQSYNPPQ----GY--G 156

Query: 236 QCNHYPGYSRPGAGGGGGGGGG----------GGGGSGGGGG----GGGAGAGGAGAGAV 281
           Q N Y   S    GGGGGGGGG           GGGSGGG G     GG G+GG G    
Sbjct: 157 QQNQYNSSS---GGGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGSGGYGQQDR 213

Query: 282 AAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA 341
                  +   GGGGGGGY  SS GY     PR +GGG   G GG G         GS  
Sbjct: 214 GGRGRGGSGGGGGGGGGGYNRSSGGY----EPRGRGGG-RGGRGGMG---------GSDR 259

Query: 342 GGFQRFAGQNQHPS 355
           GGF +F G     S
Sbjct: 260 GGFNKFGGPRDQGS 273



 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 45/131 (34%), Positives = 45/131 (34%), Gaps = 24/131 (18%)

Query: 238 NHYPGYSRPGAGGGG--GGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAA----------- 284
           N   G  R G G GG  G GG GGGGSGGGG GG    GG G G   A            
Sbjct: 376 NRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCEN 435

Query: 285 --------AAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMG---PGGGGAASLS 333
                        A    G GGG GGS  G       R   GG   G     GG      
Sbjct: 436 MNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGDRGGFR 495

Query: 334 KAAAGSAAGGF 344
               G   GGF
Sbjct: 496 GGRGGGDRGGF 506



 Score = 46.6 bits (109), Expect = 3e-04
 Identities = 55/203 (27%), Positives = 73/203 (35%), Gaps = 41/203 (20%)

Query: 704 SQMPPQPPGSQS--------ESSSHPALSQSPMPQERGFMAGTQRNPQ------------ 743
           SQ   QP G QS        ++S +   S S   Q +    GTQ  PQ            
Sbjct: 26  SQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNTGYGTQSTPQGYGSTGGYGSSQ 85

Query: 744 --MAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSN----SSGTY------GPQMSQYGP 791
              + YG Q + P     P+P     +  SS Q S+     SG+Y      G Q   YG 
Sbjct: 86  SSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSGSYSQQPSYGGQQQSYGQ 145

Query: 792 QGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPF 851
           Q +Y+ P  Y      + S  G G G    N  +GQ  S    ++  G     G  N+  
Sbjct: 146 QQSYNPPQGYGQQNQYNSSSGGGGGGGGGGN--YGQDQS----SMSSGGGSGGGYGNQDQ 199

Query: 852 PGNMSSMTPSSPGMSQQGGPGMG 874
            G   S      G   +GG G G
Sbjct: 200 SGGGGS---GGYGQQDRGGRGRG 219



 Score = 46.6 bits (109), Expect = 3e-04
 Identities = 25/57 (43%), Positives = 28/57 (49%), Gaps = 12/57 (21%)

Query: 243 YSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGG 299
           ++R G  G GG G GG  G GG GGGG  G G  G              +GGGGGGG
Sbjct: 375 FNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGG------------FPSGGGGGGG 419



 Score = 45.8 bits (107), Expect = 5e-04
 Identities = 74/289 (25%), Positives = 91/289 (31%), Gaps = 59/289 (20%)

Query: 547 YCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNH 606
           Y QQ  Q Y +   QP             SQQ  QP    S  GY ++S      G+ ++
Sbjct: 6   YTQQATQSYGAYPTQPGQ---------GYSQQSSQPYGQQSYSGY-SQSTDTSGYGQSSY 55

Query: 607 EDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHA 666
                             G   +   GT++T     S  G  SSQ  QS+  Q       
Sbjct: 56  SSY---------------GQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQ------ 94

Query: 667 SPHLSSIPG---GPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQS---ESSSH 720
               SS PG    P+PS      GS+   S    P S   SQ P      QS   + S +
Sbjct: 95  ----SSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSGSYSQQPSYGGQQQSYGQQQSYN 150

Query: 721 PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 780
           P        Q      G         YG  Q+        S GG    G  +  QS   G
Sbjct: 151 PPQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSS------MSSGGGSGGGYGNQDQSGGGG 204

Query: 781 TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGP 829
           + G     YG Q    R    SG       G G G G   N    G  P
Sbjct: 205 SGG-----YGQQDRGGRGRGGSG-------GGGGGGGGGYNRSSGGYEP 241



 Score = 45.8 bits (107), Expect = 5e-04
 Identities = 44/143 (30%), Positives = 49/143 (34%), Gaps = 28/143 (19%)

Query: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMD------PLQNSHE 230
           G      GGP GR G      GG    G G   S      G   + D        +N + 
Sbjct: 382 GRGGRGRGGPMGRGGY---GGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNF 438

Query: 231 GYPNSQCNHYPGYSRPGAGGGGGGGGGGG-------GGSGGGGGGGGAGAGGAGAGAVAA 283
            + N +CN        G GGG GG   GG       GG GG   GG  G GG   G    
Sbjct: 439 SWRN-ECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGDRGGF--- 494

Query: 284 AAAAAAAAAGGGGGGGYGGSSAG 306
                    GG GGG  GG   G
Sbjct: 495 --------RGGRGGGDRGGFGPG 509



 Score = 44.3 bits (103), Expect = 0.001
 Identities = 43/155 (27%), Positives = 53/155 (34%), Gaps = 30/155 (19%)

Query: 50  QQLNQFQQQQQQQQQQQQQQQQ---QQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKD 106
           QQ +   QQQ   QQQ     Q   QQ+  ++++  GG GGG    G D      GG   
Sbjct: 132 QQPSYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSSMSSGGGSG 191

Query: 107 SAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGP 166
              G Q    G                 G    G+ +  G G  G+         GGGG 
Sbjct: 192 GGYGNQDQSGGG----------------GSGGYGQQDRGGRGRGGS---------GGGGG 226

Query: 167 AAVPEFNNYYGSAAP--ASGGPGGRAGPCFDQHGG 199
                +N   G   P    GG GGR G      GG
Sbjct: 227 GGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGG 261



 Score = 39.7 bits (91), Expect = 0.033
 Identities = 61/263 (23%), Positives = 83/263 (31%), Gaps = 56/263 (21%)

Query: 173 NNYYGSAAPASGGPGGRAGPCFDQHGGQ---QSPGMGMMHSASAAAAGAPGSMDPLQNSH 229
           N+Y   A  + G    + G  + Q   Q   Q    G   S   +  G        Q+S+
Sbjct: 4   NDYTQQATQSYGAYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGYG--------QSSY 55

Query: 230 EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGG------GGGGAGAGGAGAGAVAA 283
             Y  SQ   Y   S P   G  GG G         G      G G   A  + +G+  +
Sbjct: 56  SSYGQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGS 115

Query: 284 AAAAAAAAAGGGGG----GGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGS 339
           ++ +++      G       YGG    YG     +QQ      G G     + S    G 
Sbjct: 116 SSQSSSYGQPQSGSYSQQPSYGGQQQSYG-----QQQSYNPPQGYGQQNQYNSSSGGGGG 170

Query: 340 AAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQA 399
             GG     GQ+Q                   M S GGS   Y +           Q Q+
Sbjct: 171 GGGGGNY--GQDQSS-----------------MSSGGGSGGGYGN-----------QDQS 200

Query: 400 AAAGAAAGGQQAAAGMGLGKDMG 422
              G+   GQQ   G G G   G
Sbjct: 201 GGGGSGGYGQQDRGGRGRGGSGG 223



 Score = 38.1 bits (87), Expect = 0.096
 Identities = 46/177 (25%), Positives = 61/177 (34%), Gaps = 25/177 (14%)

Query: 1194 NSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYN 1253
            N  T  A    G + P   G+   + +  P+G  +   G S+   T G   +S      +
Sbjct: 4    NDYTQQATQSYG-AYPTQPGQGYSQQSSQPYG-QQSYSGYSQSTDTSGYGQSSYSSYGQS 61

Query: 1254 QSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQ--YPGQGPP-------------SGQP 1298
            Q+      +   G      YG+S   +   YGQQ  YPG G               S   
Sbjct: 62   QNTGYGTQSTPQGYGSTGGYGSSQSSQSS-YGQQSSYPGYGQQPAPSSTSGSYGSSSQSS 120

Query: 1299 PYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSG 1355
             YG  Q G Y QQP+Y       YG      +   YN      QQ  YN   G   G
Sbjct: 121  SYGQPQSGSYSQQPSYGGQQQS-YG------QQQSYNPPQGYGQQNQYNSSSGGGGG 170



 Score = 37.4 bits (85), Expect = 0.16
 Identities = 31/106 (29%), Positives = 37/106 (34%), Gaps = 46/106 (43%)

Query: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQ 316
           GGG G GG G GG  G GG G G            +GGGG GG+                
Sbjct: 378 GGGNGRGGRGRGGPMGRGGYGGGG-----------SGGGGRGGF---------------- 410

Query: 317 GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLN 362
                  P GGG             GG Q+ AG  + P+     +N
Sbjct: 411 -------PSGGGG------------GGGQQRAGDWKCPNPTCENMN 437



 Score = 33.5 bits (75), Expect = 2.4
 Identities = 37/150 (24%), Positives = 45/150 (30%), Gaps = 23/150 (15%)

Query: 474 GSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFW 533
           G+ P    Q  S      YG      Y         G  +   Y Q Q++G  T      
Sbjct: 15  GAYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNTGYGTQST--- 71

Query: 534 LMPPQYGQQG--------VSGYCQQGQQPYYSQQPQPPHL--------PPQAQYLPSQSQ 577
             P  YG  G         S Y QQ   P Y QQP P              +   P    
Sbjct: 72  --PQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSGS 129

Query: 578 QRYQPQQDMSQEGYGTRS--QPPLAPGKPN 605
              QP     Q+ YG +    PP   G+ N
Sbjct: 130 YSQQPSYGGQQQSYGQQQSYNPPQGYGQQN 159



 Score = 32.3 bits (72), Expect = 5.2
 Identities = 30/119 (25%), Positives = 46/119 (38%), Gaps = 5/119 (4%)

Query: 826 GQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQ 885
           GQG SQ   + P G+   +G             + SS G SQ  G G      +  +   
Sbjct: 22  GQGYSQQ-SSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNTGYGT----QSTPQGYG 76

Query: 886 EAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPA 944
                    ++ S+  +Q S+PG  Q    +S+S      + SSS    Q+  YS  P+
Sbjct: 77  STGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSGSYSQQPS 135



 Score = 32.0 bits (71), Expect = 6.8
 Identities = 45/190 (23%), Positives = 57/190 (30%), Gaps = 19/190 (10%)

Query: 337 AGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQ 396
           A  + G +    GQ      + P   Q  +  S    + G     YSS           Q
Sbjct: 10  ATQSYGAYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYG---------Q 60

Query: 397 SQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQ 456
           SQ    G  +  Q   +  G G    +Q +         QQ S+P         +   S 
Sbjct: 61  SQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYG-------QQSSYPGYGQQPAPSSTSGSY 113

Query: 457 GSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPP---GPQRYPIGIQGRTPGAMA 513
           GS        +PQ       P    QQ S     SY PP   G Q       G   G   
Sbjct: 114 GSSSQSSSYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGG 173

Query: 514 GMQYPQQQDS 523
           G  Y Q Q S
Sbjct: 174 GGNYGQDQSS 183


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 90.9 bits (224), Expect = 1e-17
 Identities = 212/915 (23%), Positives = 314/915 (34%), Gaps = 131/915 (14%)

Query: 104 AKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQ-QPPVAVPGG 162
           AK  AA        P LL+        PP    PA  R     LGA G   + P+A   G
Sbjct: 8   AKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRV----LGAAGAVGRKPLAERAG 63

Query: 163 GGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSM 222
           G G A +PE       +AP       RAGP        +S G    + AS   A   G  
Sbjct: 64  GIGGATIPE-------SAP-------RAGPT-------RSAGTSSRNPASRPPASGRGER 102

Query: 223 DPLQNSHEGYPNSQCNHYPGYSRPGAGGGGG-----------GGGGGGGGSGGGGGGGGA 271
            P   +    P S      G +RPG  G  G           G             G   
Sbjct: 103 APPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARR 162

Query: 272 GAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAAS 331
              G   G  + A A  + AAG   G      SA       PR    G           S
Sbjct: 163 DTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA------RPRPPTEGPRKSVSSASEHS 216

Query: 332 LSKAAAG-----SAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPS 386
            ++ +       SA GG QR A ++   S ATP  +   + PS        ++P    P 
Sbjct: 217 TTEPSPAARRRPSAGGGLQRPASRSLS-SSATPLSSPARSGPSARGTPRAPAHPSQPKPK 275

Query: 387 A----PPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPA 442
                 PP  + P+  AA A     G  +++ +       A  + A P   A    S   
Sbjct: 276 GLQALRPPQVTPPRKDAAPAL----GPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLT 331

Query: 443 MSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGG-------SYGPP 495
               TP P    S  +P        P L  + S P + P Q++   G        S+ P 
Sbjct: 332 CQLATPLPLAPPSPSAP--------PSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPS 383

Query: 496 GPQRYPIGIQGRTPGAMA--GMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQ 553
            P         + P A+A   +Q P    +            PP       S        
Sbjct: 384 PPLSPLATPPPQAPPALALPPLQAPPSPPAS-----------PPLSPLATPSPQAPNALA 432

Query: 554 PYYSQQP--QPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA--PGKPNHEDL 609
            +  Q P   PP  P QA + P  S     P      +   + + PPL   P  P    +
Sbjct: 433 VHLLQAPFSPPPSPPVQAPFSPPASPP-VSPSATPPSQAPPSLAAPPLQVPPSPPASPPM 491

Query: 610 NLIQQERPSSLPDLSGSIDDL----PTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPH 665
           +      P + P L+     L    P    A  +  + A  S  +    S P Q+PFSP 
Sbjct: 492 SPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPA----SFPGQAPFSPS 547

Query: 666 ASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESS-SHPALS 724
           AS  +S +    +P P   PV +      P SP + P  Q P +PP    ++S S P L+
Sbjct: 548 ASLPMSPL---ATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLT 604

Query: 725 QSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGP 784
            +  P   G      R+P     GP   G S S   +P  +   G  S  +  ++ +  P
Sbjct: 605 LALAP---GPPPPPSRSPSSTLSGPDLAGHSSSATSTP--EELRGYDSGPEGGAAASPPP 659

Query: 785 --QMSQYGPQGNYSRPP----AYSGVPSASY-----SGPGPGMGISANNQMHGQGPSQPC 833
             +++   P   +SR P    A+ G P A       +GPG   G+    +  G   + P 
Sbjct: 660 DAELAACHPAA-WSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPA 718

Query: 834 -GAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVM 892
            GA+  G  P      +   G  +  +  SP  ++ G   +G    +V +     +  ++
Sbjct: 719 PGALDPGPSPGTS-GGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHL--LSRTLL 775

Query: 893 QAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAAS 952
            AAA  A    G  PG  + G +   +         ++L + +   ++   + ++ S AS
Sbjct: 776 LAAAEGAAGGSGGGPGGAEGGGVTGGA--------RAALSDAELGRWAELLSPLDESRAS 827

Query: 953 VGLADMMSPGESKLP 967
           +      SP +   P
Sbjct: 828 ITSVTSFSPDDVASP 842



 Score = 84.7 bits (208), Expect = 9e-16
 Identities = 161/739 (21%), Positives = 236/739 (31%), Gaps = 120/739 (16%)

Query: 327 GGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPS 386
           G A ++ +      AGG          P  A PT +   +S +P  R       E  +P 
Sbjct: 48  GAAGAVGRKPLAERAGGIGGATIPESAPR-AGPTRSAGTSSRNPASRPPASGRGE-RAPP 105

Query: 387 APPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMG-----AQYAAASPAWAAAQQRSHP 441
           A    P    S   A+G    G     G+ +  +       A  A    A +A  +R   
Sbjct: 106 AKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTS 165

Query: 442 AMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYP 501
             +PGTP P M R   +    + + RP       +   +P    P    S         P
Sbjct: 166 GPTPGTPSPAMARRSRAAGTEVGLPRP-----APSARPRPPTEGPRKSVSSASEHSTTEP 220

Query: 502 IGIQGRTPGAMAGMQYPQQQD-SGDATWKETFWLMPPQYGQQGVSGYCQQG--QQPYYSQ 558
                R P A  G+Q P  +  S  AT                 SG   +G  + P +  
Sbjct: 221 SPAARRRPSAGGGLQRPASRSLSSSAT----------PLSSPARSGPSARGTPRAPAHPS 270

Query: 559 QPQPPHL---------PPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDL 609
           QP+P  L         PP+    P+       P    S         PP  P  P+   L
Sbjct: 271 QPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSL 330

Query: 610 NLIQQERPSSL----PDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPH 665
              Q   P  L    P    S+  LP+      S A ++ GS + Q   S     P SP 
Sbjct: 331 TC-QLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPL 389

Query: 666 ASPH--------LSSIPGGPSP--SPVGSPVGSNQSRS----------GPISPASIPGSQ 705
           A+P         L  +   PSP  SP  SP+ +   ++           P SP   P  Q
Sbjct: 390 ATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQ 449

Query: 706 MPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQ 765
            P  PP S   S S    SQ+P       +      P      P  T P  +P P     
Sbjct: 450 APFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPP 509

Query: 766 MHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMH 825
           +                  Q+++  PQ     PPA +  P  +   P             
Sbjct: 510 L------------------QLAKPPPQA----PPALATPPLQALPSPPA--------SFP 539

Query: 826 GQGPSQPCGAVPLGRMPSAGMQNRPF---------PGNMSSMTPSSPGMSQQGGP----- 871
           GQ P  P  ++P+  + +   Q  P          P   +S T  +P      GP     
Sbjct: 540 GQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVS 599

Query: 872 --------GMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMN---QSGLMASSSP 920
                     GPP P     +   +   +   ++SA S      G +   + G  AS  P
Sbjct: 600 GPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPP 659

Query: 921 YSQ-PMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESK-LPLPLKADGKEEG 978
            ++    + ++     APP     A   +  A +       PG +  L    + +G E  
Sbjct: 660 DAELAACHPAAWSRGPAPPL----AFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESA 715

Query: 979 TPQPESKSKKSSSSTTTGE 997
           TP P +     S  T+ G+
Sbjct: 716 TPAPGALDPGPSPGTSGGK 734



 Score = 44.3 bits (103), Expect = 0.001
 Identities = 54/187 (28%), Positives = 71/187 (37%), Gaps = 30/187 (16%)

Query: 1414 PYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQP 1473
            P P    Q P  P  +PP    + T     P        Q P       P MS SA+  P
Sbjct: 442  PPPSPPVQAPFSPPASPPV-SPSATPPSQAPPSLAAPPLQVPPSPPASPP-MSPSATPPP 499

Query: 1474 ITRPP---------QPSYQTPPSLPNHISRA-PSP-ASFQRSLENRMSPSKSPFLPSMKM 1522
               PP         +P  Q PP+L     +A PSP ASF         P ++PF PS  +
Sbjct: 500  QAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASF---------PGQAPFSPSASL 550

Query: 1523 QKVMPTVPTSQVTGPPPQPPPI-RREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRV 1581
                   P S +  PPPQ PP+    +   P S  AS  +   RR  T     +    R+
Sbjct: 551  -------PMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRL 603

Query: 1582 MMSLKSG 1588
             ++L  G
Sbjct: 604  TLALAPG 610



 Score = 43.9 bits (102), Expect = 0.002
 Identities = 64/257 (24%), Positives = 80/257 (31%), Gaps = 86/257 (33%)

Query: 90  PQPGPDMEQPQHGGAKDSAAGGQADPP-----------GPPLLSKPGDEDDAPPKM---- 134
           P PGPD       G + + A     PP           GP L          P ++    
Sbjct: 590 PTPGPDTSV---SGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYD 646

Query: 135 GEPAGGRYE-----------HPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPAS 183
             P GG              HP   + G   PP+A  G  G P   P          PA+
Sbjct: 647 SGPEGGAAASPPPDAELAACHPAAWSRGPA-PPLAFRGAPGAPLPWP----------PAT 695

Query: 184 GGPGGRAGPC--FDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYP 241
           G PG   G C  ++  G +             +A  APG++DP  +              
Sbjct: 696 G-PGSADGLCTIYETEGPE-------------SATPAPGALDPGPS-------------- 727

Query: 242 GYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGA------------GAVAAAAAAAA 289
               PG  GG    G G G S         G    GA              + AAA  AA
Sbjct: 728 ----PGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAA 783

Query: 290 AAAGGGGGGGYGGSSAG 306
             +GGG GG  GG   G
Sbjct: 784 GGSGGGPGGAEGGGVTG 800



 Score = 39.7 bits (91), Expect = 0.033
 Identities = 95/480 (19%), Positives = 149/480 (31%), Gaps = 62/480 (12%)

Query: 1121 QPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPT-PASTPHGQMTPMQGGRSSTISVH 1179
            +PP P    +L+      + G   +AE  G +   T P S P    T   G  S   +  
Sbjct: 34   RPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASR 93

Query: 1180 DPFSDVSDSSFPKRNSM---TPNAPYQQGMSMPDVMGRMPYEPNKDPF---GGMRKVPGS 1233
             P S   + + P +N+      +     G + P  +G+     + +     G   + P  
Sbjct: 94   PPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKR 153

Query: 1234 SEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGP 1293
            S   ++ G   ++S       SP+ A  +   G     P  A   R   P       +GP
Sbjct: 154  SA--LSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPT------EGP 205

Query: 1294 PSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSY 1353
                     H           +    G    PA R      ++  S+       + G S 
Sbjct: 206  RKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASR------SLSSSATPLSSPARSGPSA 259

Query: 1354 SGPDRRPIQGQYPYPYSRERMQGP-------------GQIQTHGIPPQMMGGPLQSSSSE 1400
             G  R P     P P   + ++ P             G + +  +        LQS +  
Sbjct: 260  RGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPP 319

Query: 1401 G----PQQNMWAARNDMPYPYQNRQGPGGPT-----QAPPYPGMNRTDDMMVPDQRINHE 1451
                 P  +    +   P P         P+       P  P    T  +  P  +  H 
Sbjct: 320  TLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHS 379

Query: 1452 ---SQWPSHVSQRQPYMSSSASMQPITRPPQP------------SYQTPPSLPNHISRAP 1496
               S   S ++   P    + ++ P+  PP P            S Q P +L  H+ +AP
Sbjct: 380  FLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAP 439

Query: 1497 SPASFQRSLENRMSPSKS-PFLPSMKMQKVMP---TVPTSQVTGPPPQPPPIRREITFPP 1552
                    ++   SP  S P  PS       P     P  QV   PP  PP+    T PP
Sbjct: 440  FSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP 499



 Score = 39.3 bits (90), Expect = 0.043
 Identities = 50/198 (25%), Positives = 63/198 (31%), Gaps = 14/198 (7%)

Query: 92  PGPDMEQPQHGGAKDSAA-------GGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEH 144
           P   +  P   G   SA        G  + P G    S P D + A       A  R   
Sbjct: 619 PSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAA--CHPAAWSRGPA 676

Query: 145 PGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRA---GPCFDQHGGQQ 201
           P L   G    P+  P   G P +       Y +  P S  P   A   GP     GG+ 
Sbjct: 677 PPLAFRGAPGAPLPWPPATG-PGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKA 735

Query: 202 SPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGG 261
           + G G   S+ +      G + PL            +     +      GG GGG GG  
Sbjct: 736 AAGAGAGASSRSPKQARLGEL-PLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAE 794

Query: 262 SGGGGGGGGAGAGGAGAG 279
            GG  GG  A    A  G
Sbjct: 795 GGGVTGGARAALSDAELG 812



 Score = 33.9 bits (76), Expect = 1.8
 Identities = 36/126 (28%), Positives = 47/126 (37%), Gaps = 16/126 (12%)

Query: 85  AGGGAPQPGPDMEQPQHGGAKDS-AAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
           AG      GP    P    A+ S AAG +   P P   ++P    + P K    A    E
Sbjct: 158 AGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSAS---E 214

Query: 144 HPGLGALGTQQPPVAV---PGGGGG---PAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
           H       T +P  A    P  GGG   PA+    ++    ++PA  GP  R  P    H
Sbjct: 215 H------STTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAH 268

Query: 198 GGQQSP 203
             Q  P
Sbjct: 269 PSQPKP 274



 Score = 33.5 bits (75), Expect = 2.4
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 15/82 (18%)

Query: 1104 PPPEVFSTGDTKKQPKLQ-PPSPANSGSLQGPQTPQSTGSN--------SMAEVPGDLKP 1154
            PPP+          P LQ PPSP  S +LQ P+ P + G +        ++A  PG   P
Sbjct: 558  PPPQA---PPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPG--PP 612

Query: 1155 PTPASTPHGQMT-PMQGGRSST 1175
            P P+ +P   ++ P   G SS+
Sbjct: 613  PPPSRSPSSTLSGPDLAGHSSS 634



 Score = 32.7 bits (73), Expect = 4.0
 Identities = 46/230 (20%), Positives = 81/230 (35%), Gaps = 28/230 (12%)

Query: 1351 GSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAAR 1410
            G  + P +    G    P        PG +   G+         +  ++E P+++  +A 
Sbjct: 100  GERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAG 159

Query: 1411 NDMPYPYQNRQGPGGPTQAPPYPGMNRTD-----DMMVPDQRINHESQWPSHVSQRQPYM 1465
                     R+   GPT   P P M R       ++ +P    +   + P+      P  
Sbjct: 160  A--------RRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTE----GPRK 207

Query: 1466 SSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKS----------P 1515
            S S++ +  T  P P+ +  PS    + R P+  S   S     SP++S          P
Sbjct: 208  SVSSASEHSTTEPSPAARRRPSAGGGLQR-PASRSLSSSATPLSSPARSGPSARGTPRAP 266

Query: 1516 FLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQR 1565
              PS    K +  +   QVT P     P    ++  P +  +    L+ +
Sbjct: 267  AHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQ 316


>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
          Length = 1838

 Score = 90.5 bits (223), Expect = 2e-17
 Identities = 208/836 (24%), Positives = 273/836 (32%), Gaps = 126/836 (15%)

Query: 111  GQADPPGPPLLS----KPGDEDDAPPKMGEPAG-GRYEHPGLGALGTQQPPVAVPGGGGG 165
            G   PPGPP ++    +PG + +  P+ GEP   G+  +PG   L   Q  +  PG  G 
Sbjct: 688  GPPGPPGPPGVTGMDGQPGPKGNVGPQ-GEPGPPGQQGNPGAQGLPGPQGAIGPPGEKG- 745

Query: 166  PAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPG----- 220
            P   P      G+  P  G PG    P   + GGQ  PG            G PG     
Sbjct: 746  PLGKPGLPGMPGADGPP-GHPGKEGPP--GEKGGQGPPG-------PQGPIGYPGPRGVK 795

Query: 221  SMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGA 280
              D ++           + +PG+       G  G  G  G  G  G  G  G GG     
Sbjct: 796  GADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDP 855

Query: 281  VAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSA 340
                        G  G  GY G     G +  P   G     G  G       +   G  
Sbjct: 856  GPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPT 915

Query: 341  AGGFQRFAGQNQHPSGAT----PTLNQLLTSPSPMMRSYGGSYPE----YSSPSAPPPPP 392
                +R       P G T    P  N     P+      G + P+    +  P  PP PP
Sbjct: 916  GPRGER------GPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPP 969

Query: 393  SQPQSQAAAAGAAAGGQQAAAGM-GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPG-- 449
             +             G Q   G  G    +G Q            +R HP   PG PG  
Sbjct: 970  GKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETG--PMGERGHPG-PPGPPGEQ 1026

Query: 450  --PTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYG---------PPGP- 497
              P +   +G+  DP     P   G          +  P P G+ G         PPGP 
Sbjct: 1027 GLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPA 1086

Query: 498  ----QRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQ 553
                +R P G  G  P  + G   PQ    G A  K      P + G QG +G  + G Q
Sbjct: 1087 GSPGERGPAGAAG--PIGIPGRPGPQGPP-GPAGEKGA----PGEKGPQGPAG--RDGLQ 1137

Query: 554  -PYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQP-------PLAPGKPN 605
             P     P  P  PP          +  +P Q  S+   G +  P       P+    P+
Sbjct: 1138 GPVGLPGPAGPVGPPGED---GDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPS 1194

Query: 606  HED--------LNLIQQ---ERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQ 654
              D          L  Q   E P   P   G     P G +  L       G T   G  
Sbjct: 1195 GADGEPGPRGQQGLFGQKGDEGPRGFPGPPG-----PVGLQG-LPGPPGEKGETGDVGQM 1248

Query: 655  SNPAQ-SPFSPHASPHLSSIPGGPSPSPVGSPVG-SNQSRSGPISPASIPGSQMPPQPPG 712
              P    P  P  +P     P GP P  +G+P     +   G      +PG   PP P G
Sbjct: 1249 GPPGPPGPRGPSGAPGADG-PQGP-PGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKG 1306

Query: 713  SQSE--SSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPS-----PGGQ 765
             + E   S     +  P P+      G + +P    + P   GP   P P+     PG +
Sbjct: 1307 ERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGF-PGDPGPPGEPGPAGQDGPPGDK 1365

Query: 766  MHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPS-ASYSGPGPGMGISANNQM 824
               G     +   +G+ GP   + GP G    PP   G P  A   G     G      +
Sbjct: 1366 GDDG-----EPGQTGSPGP-TGEPGPSG----PPGKRGPPGPAGPEGRQGEKGAKGEAGL 1415

Query: 825  HG----QGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPP 876
             G     GP  P GA   G+    G++  P P     + P SPG     GP MGPP
Sbjct: 1416 EGPPGKTGPIGPQGAP--GKPGPDGLRGIPGPVGEQGL-PGSPGPDGPPGP-MGPP 1467



 Score = 90.1 bits (222), Expect = 2e-17
 Identities = 201/802 (25%), Positives = 251/802 (31%), Gaps = 155/802 (19%)

Query: 111  GQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPP--VAVPGGGGGPA- 167
            G+    G P + +PG   + PP    PAG        G  GT  P   V  PG  G P  
Sbjct: 450  GEKGQKGEPAIIEPGMLIEGPPGPEGPAGLP------GPPGTMGPTGQVGDPGERGPPGR 503

Query: 168  -AVPEFNNYYGSAA-----PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGS 221
              +P  +   G        P   G GG AG        Q+S    ++  A  A  G  G 
Sbjct: 504  PGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGP 563

Query: 222  MDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAV 281
            M                  PG   P   GG  G  G  G  G  G  G  G  G      
Sbjct: 564  MG-------------LTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPG--- 607

Query: 282  AAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA 341
                A +  A G  G  G  G     G+   P ++G     GP G           G   
Sbjct: 608  RRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSG---------PPGPPG 658

Query: 342  GGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAA 401
               +R       P G       L   P P  R   G       P  PP PP  P      
Sbjct: 659  DDGERGDDGEVGPRG-------LPGEPGP--RGLLG-------PKGPPGPPGPP------ 696

Query: 402  AGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMD 461
                  GQ    G     ++G Q     P      Q+ +P  + G PGP    + G P +
Sbjct: 697  GVTGMDGQPGPKG-----NVGPQGEPGPPG-----QQGNPG-AQGLPGPQ--GAIGPPGE 743

Query: 462  PMVMKRPQLYGM--GSNPHSQPQQSSPYPG--GSYGPPGPQRYPIGIQGRTPGAMAGMQY 517
               + +P L GM     P   P +  P PG  G  GPPGPQ  PIG  G  P  + G   
Sbjct: 744  KGPLGKPGLPGMPGADGPPGHPGKEGP-PGEKGGQGPPGPQG-PIGYPG--PRGVKGA-- 797

Query: 518  PQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQ 577
                  G    K T      + G+ G  G+  +G       + +     P+ +  P   +
Sbjct: 798  -----DGIRGLKGT----KGEKGEDGFPGF--KGDMGIKGDRGEIGPPGPRGEDGPEGPK 846

Query: 578  QRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEAT 637
             R  P  D    G      PP   GK                +P L G            
Sbjct: 847  GRGGPNGDPGPLG------PPGEKGK--------------LGVPGLPGYPGRQGPKGSIG 886

Query: 638  LSSAVSASGSTSSQGDQSNPA----QSPFSPHASPHLSSIPGGPSP-------SPVGSPV 686
                  A+G    +G    P     + P  P        I G P P        P G P 
Sbjct: 887  FPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPP- 945

Query: 687  GSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQ 746
               +  +GP  P   PG + PP PPG       HP         E GF   T        
Sbjct: 946  -GERGPNGPQGPTGFPGPKGPPGPPGKDG-LPGHPG-----QRGETGFQGKTGPPGPPGV 998

Query: 747  YGPQ----QTGP-SMSPHPSPGGQM-HAGISSFQQSNSSGTYGPQMSQYGPQG--NYSRP 798
             GPQ    +TGP     HP P G     G+     +   GT G      GP G      P
Sbjct: 999  VGPQGPTGETGPMGERGHPGPPGPPGEQGLPGL--AGKEGTKGDP----GPAGLPGKDGP 1052

Query: 799  PAYSGVP-SASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSS 857
            P   G P      GP   +G+  N      GP  P G+ P  R P+        PG    
Sbjct: 1053 PGLRGFPGDRGLPGPVGALGLKGNE--GPPGPPGPAGS-PGERGPAGAAGPIGIPGRPGP 1109

Query: 858  MTPSSPGMSQQGGPG-MGPPMP 878
              P  P   ++G PG  GP  P
Sbjct: 1110 QGPPGPA-GEKGAPGEKGPQGP 1130



 Score = 87.8 bits (216), Expect = 1e-16
 Identities = 237/975 (24%), Positives = 301/975 (30%), Gaps = 169/975 (17%)

Query: 58   QQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPG 117
            Q+ Q Q   QQ +      +    L G  G    PG    + + G        G   PPG
Sbjct: 542  QESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPPG 601

Query: 118  PPLLSKPG-------DEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVP 170
            P    KPG       D     P    P G R    GL  L  ++     P G  GP   P
Sbjct: 602  P--AGKPGRRGRAGSDGARGMPGQTGPKGDR-GFDGLAGLPGEKGHRGDP-GPSGPPGPP 657

Query: 171  EFNNYYGS-------AAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMD 223
              +   G          P   GP G  GP     G    PG+  M        G  G++ 
Sbjct: 658  GDDGERGDDGEVGPRGLPGEPGPRGLLGP-KGPPGPPGPPGVTGMD----GQPGPKGNVG 712

Query: 224  PLQNSHEGYPNSQCNHYPGYSRPGAGG--GGGGGGGGGGGSGGGGGGGGAGAGGAGAGAV 281
            P      G P  Q N       PGA G  G  G  G  G  G  G  G  G  GA     
Sbjct: 713  P--QGEPGPPGQQGN-------PGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGAD---- 759

Query: 282  AAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGP----GGGGAASLSKAAA 337
                       G  G  G  G   G G    P  QG     GP    G  G   L     
Sbjct: 760  --------GPPGHPGKEGPPGEKGGQG---PPGPQGPIGYPGPRGVKGADGIRGLKGTKG 808

Query: 338  GSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQS 397
                 GF  F G      G      + +  P P              P+  P P   P  
Sbjct: 809  EKGEDGFPGFKGD----MGIKGDRGE-IGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGE 863

Query: 398  QAAAAGAAAGGQQAAAGM-GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQ 456
            +         G+    G+ G     G + +   P +  A        +PG PGP   R Q
Sbjct: 864  K---------GKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGP---RGQ 911

Query: 457  GSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQ 516
              P  P   + P+  G+   P  +       P    GPPG +R P G QG  P    G +
Sbjct: 912  RGPTGPRGERGPR--GITGKPGPKGNSGGDGPA---GPPG-ERGPNGPQG--PTGFPGPK 963

Query: 517  YPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQS 576
             P      D         +P   GQ+G +G+  QG+    +  P PP +           
Sbjct: 964  GPPGPPGKDG--------LPGHPGQRGETGF--QGK----TGPPGPPGV----------- 998

Query: 577  QQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEA 636
                 PQ    + G       P  PG P  +            LP L+G          A
Sbjct: 999  ---VGPQGPTGETGPMGERGHPGPPGPPGEQ-----------GLPGLAGKEGTKGDPGPA 1044

Query: 637  TLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPS-PSPVGSPVGSNQSRSGP 695
             L       G     GD+  P      P  +  L    G P  P P GSP    +  +G 
Sbjct: 1045 GLPGKDGPPGLRGFPGDRGLP-----GPVGALGLKGNEGPPGPPGPAGSP--GERGPAGA 1097

Query: 696  ISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYG-PQQTGP 754
              P  IPG   P  PPG   E  +         P E+G      R+      G P   GP
Sbjct: 1098 AGPIGIPGRPGPQGPPGPAGEKGA---------PGEKGPQGPAGRDGLQGPVGLPGPAGP 1148

Query: 755  SMSPHPSPGGQMHAGISSFQQSNSSGTYGPQ--MSQYGPQGNYSRPPAYSGVPSASYSGP 812
             + P    G +   G     Q  S G  G Q      GPQG   +P      PS +   P
Sbjct: 1149 -VGPPGEDGDKGEIGEPG--QKGSKGDKGEQGPPGPTGPQGPIGQPG-----PSGADGEP 1200

Query: 813  GPGMGISANNQMHGQGP---SQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSP--GMSQ 867
            GP        Q   +GP     P G V L  +P    + +   G++  M P  P      
Sbjct: 1201 GPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGE-KGETGDVGQMGPPGPPGPRGP 1259

Query: 868  QGGPG----MGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQ 923
             G PG     GPP    N  A        +A         G      + G    S P   
Sbjct: 1260 SGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGP--- 1316

Query: 924  PMNNSSSLMNTQAPPYSMAPAMVNSSAASVGL-ADMMSPGESKLPLPLKADGKEEGTPQP 982
              + ++     + PP    P     S   VG   D   PGE   P P   DG   G    
Sbjct: 1317 --SGAAGPPGPKGPPGDDGP---KGSPGPVGFPGDPGPPGE---PGPAGQDG-PPGDKGD 1367

Query: 983  ESKSKKSSSSTTTGE 997
            + +  ++ S   TGE
Sbjct: 1368 DGEPGQTGSPGPTGE 1382



 Score = 85.9 bits (211), Expect = 4e-16
 Identities = 179/702 (25%), Positives = 215/702 (30%), Gaps = 132/702 (18%)

Query: 83   GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP----LLSKPGDEDDA-------- 130
            G +GG  P  GP  E+  +G    +   G   PPGPP    L   PG   +         
Sbjct: 934  GNSGGDGPA-GPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGP 992

Query: 131  --PPKMGEPAGGRYEHPGLGALGTQQPP-----VAVPG--------GGGGPAAVPEFNNY 175
              PP +  P G   E   +G  G   PP       +PG        G  GPA +P     
Sbjct: 993  PGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLP----- 1047

Query: 176  YGSAAPAS--GGPGGRAGP----CFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSH 229
             G   P    G PG R  P         G +  PG           AG+PG   P   + 
Sbjct: 1048 -GKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPG-------PPGPAGSPGERGPAGAAG 1099

Query: 230  E-GYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAA 288
              G P       PG   P    G  G  G  G  G  G  G  G  G    A        
Sbjct: 1100 PIGIPGR-----PGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGE 1154

Query: 289  AAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLSKAAAGSAAGGFQRF 347
                G  G  G  GS    G    P   G    +G PG  GA             G +  
Sbjct: 1155 DGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGD 1214

Query: 348  AGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAG 407
             G    P    P   Q L  P P  +   G   +       PP P  P+  + A GA  G
Sbjct: 1215 EGPRGFPGPPGPVGLQGLPGP-PGEKGETGDVGQMG-----PPGPPGPRGPSGAPGAD-G 1267

Query: 408  GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAM--SPGTPGPTMGRSQGSPMDPMVM 465
             Q    G+G   + GA      P  A       P +    G PGP   R +     P   
Sbjct: 1268 PQGPPGGIG---NPGAVGEKGEPGEAG-----EPGLPGEGGPPGPKGERGEKGESGPSGA 1319

Query: 466  KRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGD 525
              P   G    P     + SP P G  G PGP   P           AG   P      D
Sbjct: 1320 AGPP--GPKGPPGDDGPKGSPGPVGFPGDPGPPGEP---------GPAGQDGPPGDKGDD 1368

Query: 526  ATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQD 585
                      P Q G  G +G       P     P P          P   Q     + +
Sbjct: 1369 GE--------PGQTGSPGPTGEPGPSGPPGKRGPPGPAG--------PEGRQGEKGAKGE 1412

Query: 586  MSQEGYGTRSQP---PLAPGKPNHEDLNLI-----QQERPSS--------------LPDL 623
               EG   ++ P     APGKP  + L  I     +Q  P S              LP L
Sbjct: 1413 AGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGL 1472

Query: 624  SGSIDDLPTGTEAT--LSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGP--SP 679
             G  D  P G +    L   +   G    +GD+  P     S        + P GP   P
Sbjct: 1473 KG--DSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPP 1530

Query: 680  SPVG-----SPVGSNQSRSGPISPASIPGSQMPPQPPGSQSE 716
             P G      P G+  S SGP  P    G   PP PPG   E
Sbjct: 1531 GPPGLPGPPGPKGAKGS-SGPTGPKGEAGHPGPPGPPGPPGE 1571



 Score = 69.7 bits (169), Expect = 3e-11
 Identities = 144/579 (24%), Positives = 182/579 (31%), Gaps = 81/579 (13%)

Query: 76   ISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMG 135
            +  N    G  G A  PG   E+   G A      G+  P GPP    P  E  AP + G
Sbjct: 1073 LKGNEGPPGPPGPAGSPG---ERGPAGAAGPIGIPGRPGPQGPP---GPAGEKGAPGEKG 1126

Query: 136  E--PAGGRYEHPGL-GALGTQQP--PVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRA 190
               PAG      GL G +G   P  PV  PG  G    + E             GP G  
Sbjct: 1127 PQGPAG----RDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPT 1182

Query: 191  GPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPL----QNSHEGYPNSQCNHYPGYSRP 246
            GP     G    PG        + A G PG         Q   EG P      +PG   P
Sbjct: 1183 GP----QGPIGQPG-------PSGADGEPGPRGQQGLFGQKGDEG-PRG----FPGPPGP 1226

Query: 247  GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG 306
                G  G  G  G +G  G  G  G  G    + A  A       GG G  G  G    
Sbjct: 1227 VGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGE 1286

Query: 307  YGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLT 366
             G    P   G G   GP G          +G+A     +    +  P G          
Sbjct: 1287 PGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKG---------- 1336

Query: 367  SPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAG-MGLGKDMGAQY 425
            SP P+       +P    P   P P  Q             GQ  + G  G     G   
Sbjct: 1337 SPGPV------GFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPG 1390

Query: 426  AAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPM-VMKRPQLYGMGSNPHSQPQQS 484
                P  A  + R     + G  G      +  P+ P     +P   G+   P    +Q 
Sbjct: 1391 KRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQG 1450

Query: 485  SPYPGGSYGPPGPQRYP--IGIQGRT--------PGAMAGMQYP-QQQDSGDATWKETFW 533
             P   G  GPPGP   P   G++G +        PG +  +  P +Q + GD        
Sbjct: 1451 LPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQG 1510

Query: 534  LMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQD--MSQEGY 591
               P+ G+QG++G             P  P  PP    LP     +           +G 
Sbjct: 1511 SSGPK-GEQGITG-------------PSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGE 1556

Query: 592  GTRSQPPLAPGKPNHEDLNL-IQQERPSSLPDLSGSIDD 629
                 PP  PG P      L IQ  R     D S  +DD
Sbjct: 1557 AGHPGPPGPPGPPGEVIQPLPIQASRTRRNIDASQLLDD 1595



 Score = 32.3 bits (72), Expect = 5.2
 Identities = 47/213 (22%), Positives = 69/213 (32%), Gaps = 55/213 (25%)

Query: 1112 GDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGG 1171
            G+T  Q K  PP P     + GPQ P  TG        G   PP P   P  Q  P   G
Sbjct: 982  GETGFQGKTGPPGPPG---VVGPQGP--TGETGPMGERGHPGPPGP---PGEQGLPGLAG 1033

Query: 1172 RSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVP 1231
            +  T        D   +  P ++       +     +P  +G +  + N+ P       P
Sbjct: 1034 KEGTKG------DPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGP-------P 1080

Query: 1232 GSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQ 1291
            G   P  + G+           + P+GA   +G+                       PG+
Sbjct: 1081 GPPGPAGSPGE-----------RGPAGAAGPIGI-----------------------PGR 1106

Query: 1292 GPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGP 1324
              P G P   G +     + P      DG+ GP
Sbjct: 1107 PGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGP 1139


>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
          Length = 1690

 Score = 89.0 bits (219), Expect = 5e-17
 Identities = 213/863 (24%), Positives = 252/863 (29%), Gaps = 183/863 (21%)

Query: 84   GAGGGAPQPGP-----DMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPA 138
            G  G A  PGP     DM  P  GG K S+  G   PPGPP       +   P   G+PA
Sbjct: 710  GTPGTAEIPGPPGFRGDMGDPGFGGEKGSSPVG---PPGPPGSPGVNGQKGIP---GDPA 763

Query: 139  GGRYEHPG---LGALGTQQPPVAVPG--GGGGPAAVPEFNNYYGSAAPASGGPGGRAGPC 193
             G    PG   L  +   + P   PG  G  GPA +P F    G        P GR G  
Sbjct: 764  FGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEGPAGIPGFLGLKG--------PKGREG-- 813

Query: 194  FDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGG 253
               H G         HS    A G PG     Q    GYP S      G  +PG  G  G
Sbjct: 814  ---HAGFPGVPGPPGHSCERGAPGIPG-----QPGLPGYPGSP-GAPGGKGQPGDVGPPG 864

Query: 254  GGGGGG-----GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308
              G  G     G  G  G  G  G  G                 G  G  G+ G     G
Sbjct: 865  PAGMKGLPGLPGRPGAHGPPGLPGIPGPFGDDGLPGPPGPKGPRGLPGFPGFPGERGKPG 924

Query: 309  VLSSPRQQGG----GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQL 364
                P  +G     GM   PG  G      A       G      Q   P    P  +  
Sbjct: 925  AEGCPGAKGEPGEKGMSGLPGDRGLRGAKGAIGPPGDEGEMAIISQKGTPGEPGPPGDDG 984

Query: 365  LTSP-----SPMMRSYGGSYPEYSSPS------------APPPPPSQPQSQAAAAGAAAG 407
                     +P M+   G    Y  P              PP PP  P S          
Sbjct: 985  FPGERGDKGTPGMQGRRGEPGRYGPPGFHRGEPGEKGQPGPPGPPGPPGST--------- 1035

Query: 408  GQQAAAGM-GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMK 466
            G +   G  GL  D G   +   P ++       P  + G P    G             
Sbjct: 1036 GLRGFIGFPGLPGDQGEPGSPGPPGFSGIDGARGPKGNKGDPASHFGP------------ 1083

Query: 467  RPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDA 526
                      P  + +  SP   G +G  G Q  P GIQG  P    G   P        
Sbjct: 1084 ----------PGPKGEPGSPGCPGHFGASGEQGLP-GIQG--PRGSPGRPGPPGSSGPPG 1130

Query: 527  TWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDM 586
                     P  +G  G+ G      QP     P P  L                 Q D 
Sbjct: 1131 C--------PGDHGMPGLRG------QPGEMGDPGPRGL-----------------QGDP 1159

Query: 587  SQEGYGTRSQPPLAPGKPNHEDLN-LIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSAS 645
               G      PP   G      LN L   +        SG  D  P G        V   
Sbjct: 1160 GIPG------PPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVGPPGP-------VGIP 1206

Query: 646  GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQ 705
            G    +GD  +P  SP  P         PG P  S    P G+       I     PG Q
Sbjct: 1207 GLKGERGDPGSPGISPPGPRGK---KGPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQ 1263

Query: 706  MPPQP------PGSQSESSSHPALSQSP-------------MPQERGFMAGTQRNPQMAQ 746
             PP P      PG      S   L   P              P   G+      + +  Q
Sbjct: 1264 GPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPPGPPGPPGYKGFPGCDGKDGQ 1323

Query: 747  YGPQQTGPSMSPHPSPGGQMHAGISSFQ-QSNSSGTYGPQMSQYGPQGNYSRPPAYSGVP 805
             GP        PH  PG     G+     +   +G  GP+  + GP  +    P   G+P
Sbjct: 1324 KGPVGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPR-GEPGPPADVDDCPRIPGLP 1382

Query: 806  SA-SYSGPGPGMGISANNQMHGQGPSQP-CGAVP--LGRMPSAGMQNRPFPGNMSSMT-- 859
             A    GP   MG+        +GPS P C   P   GR    G+   P P      T  
Sbjct: 1383 GAPGMRGPEGAMGLPGM-----RGPSGPGCKGEPGLDGRRGVDGVPGSPGPPGRKGDTGE 1437

Query: 860  ------PSSPGMSQQGGP-GMGP 875
                  P  PG     GP G GP
Sbjct: 1438 DGYPGGPGPPGPIGDPGPKGFGP 1460



 Score = 79.3 bits (194), Expect = 4e-14
 Identities = 203/809 (25%), Positives = 264/809 (32%), Gaps = 153/809 (18%)

Query: 137 PAGGR-----YEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAG 191
           P GGR     +  P  G+ G   PP   P G  GP   P              GP G +G
Sbjct: 46  PCGGRDCSVCHCVPEKGSRGPPGPPG--PQGPIGPLGAP--------------GPIGLSG 89

Query: 192 PCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGG 251
                 G +  PG          AAG  G   P      G+P    +  PG+  P    G
Sbjct: 90  EK-GMRGDRGPPG----------AAGDKGDKGP--TGVPGFPG--LDGIPGHPGPPGPRG 134

Query: 252 GGGGGGGGGGSGGGGGGGGAGAGGAGA-----------GAVAAAAAAAAAAAGGGGGGGY 300
             G  G  G  G  G  GG GA G G            G       A     G  G  G 
Sbjct: 135 KPGMSGHNGSRGDPGFPGGRGALGPGGPLGHPGEKGEKGNSVFILGAVKGIQGDRGDPGL 194

Query: 301 GG--SSAGYGVLSSPRQQGG--GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSG 356
            G   S G G  + P    G  G++  PG  G   L K   G    G     G+      
Sbjct: 195 PGLPGSWGAGGPAGPTGYPGEPGLVGPPGQPGRPGL-KGNPGVGVKGQMGDPGEVGQQGS 253

Query: 357 ATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM- 415
             PT   LL  P P    Y G       P     P   P  +   +G  A G++   G  
Sbjct: 254 PGPT---LLVEP-PDFCLYKGEKGIKGIPGMVGLP--GPPGRKGESGIGAKGEKGIPGFP 307

Query: 416 GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGR----SQGSPMDPMVMKRPQLY 471
           G   D G+     SP +   +        PG  G    +    ++G P  P V+  P L 
Sbjct: 308 GPRGDPGSY---GSPGFPGLKGELGLVGDPGLFGLIGPKGDPGNRGHPGPPGVLVTPPL- 363

Query: 472 GMGSNPHSQPQQSSPYPG-----GSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDA 526
                P   P     +PG     G  GPPGP     G+ GR   A AGM  P        
Sbjct: 364 -----PLKGPPGDPGFPGRYGETGDVGPPGPP----GLLGRPGEACAGMIGP-------- 406

Query: 527 TWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLP--PQAQYLPSQSQQRYQPQQ 584
              + F  +P   G+ G+ G  +    P    +P  P LP  P  Q LP  S   Y    
Sbjct: 407 PGPQGFPGLPGLPGEAGIPG--RPDSAPGKPGKPGSPGLPGAPGLQGLPG-SSVIYCSVG 463

Query: 585 DMSQEGYGTRSQPPLA---PGKPNHEDLNLIQ-----QERPSSLPDLSGSIDDLPTGTEA 636
           +   +G   +  PP      G+  +E L   +        P  LP   GS  DL      
Sbjct: 464 NPGPQGIKGKVGPPGGRGPKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKGDL------ 517

Query: 637 TLSSAVSASGSTSSQGDQSNP-AQSPFSPHASPHLSSIPG--GPSPSPVGSPVGSNQSRS 693
                    G   ++GD   P A+ P         S  PG  G     V S V  ++   
Sbjct: 518 ------GLPGWLGTKGDPGPPGAEGPPGLPGKHGASGPPGNKGAKGDMVVSRVKGHKGER 571

Query: 694 GPISPASIP------------GSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRN 741
           GP  P   P            G +  P PPG   +++  P     P P      AG    
Sbjct: 572 GPDGPPGFPGQPGSHGRDGHAGEKGDPGPPGDHEDAT--PGGKGFPGPLGPPGKAGPVGP 629

Query: 742 PQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAY 801
           P +   GP    P    HP   G  H G+         G  G  +S          PP +
Sbjct: 630 PGLGFPGP----PGERGHPGVPG--HPGVRG--PDGLKGQKGDTISCNVTYPGRHGPPGF 681

Query: 802 SGVPS-ASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSM-- 858
            G P    + GP    G+S ++   G+  +     +P        M +  F G   S   
Sbjct: 682 DGPPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTAEIPGPPGFRGDMGDPGFGGEKGSSPV 741

Query: 859 ----TPSSPGMS-QQGGPG------MGPP 876
                P SPG++ Q+G PG      +GPP
Sbjct: 742 GPPGPPGSPGVNGQKGIPGDPAFGHLGPP 770



 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 253/1039 (24%), Positives = 313/1039 (30%), Gaps = 203/1039 (19%)

Query: 84   GAGGGAPQPG-PDMEQPQHGGAK----DSAAGGQADPPGPPLLSKPGD---------EDD 129
            G  G   QPG P ++     G K    D    GQ   PGP LL +P D            
Sbjct: 217  GLVGPPGQPGRPGLKGNPGVGVKGQMGDPGEVGQQGSPGPTLLVEPPDFCLYKGEKGIKG 276

Query: 130  APPKMGEPA-GGRYEHPGLGALGTQQPPVAVPGGGGGPAAV--PEFNNYYGSAAPASGGP 186
             P  +G P   GR    G+GA G +  P   PG  G P +   P F    G      G P
Sbjct: 277  IPGMVGLPGPPGRKGESGIGAKGEKGIP-GFPGPRGDPGSYGSPGFPGLKGELG-LVGDP 334

Query: 187  G--GRAGPCFDQHGGQQSPG-MGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCN----H 239
            G  G  GP  D  G +  PG  G++ +      G PG  DP      G+P          
Sbjct: 335  GLFGLIGPKGDP-GNRGHPGPPGVLVTPPLPLKGPPG--DP------GFPGRYGETGDVG 385

Query: 240  YPG----YSRPG-AGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
             PG      RPG A  G  G  G  G  G  G  G AG  G    A        +    G
Sbjct: 386  PPGPPGLLGRPGEACAGMIGPPGPQGFPGLPGLPGEAGIPGRPDSAPGKPGKPGSPGLPG 445

Query: 295  GGG-GGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA------------ 341
              G  G  GSS  Y  + +P  QG    +GP GG      K   G  A            
Sbjct: 446  APGLQGLPGSSVIYCSVGNPGPQGIKGKVGPPGGRGPKGEKGNEGLCACEPGPMGPPGPP 505

Query: 342  --GGFQRFAGQ-----------NQHPSGA--TPTLNQLLTSPSP---------MMRSYGG 377
               G Q   G            +  P GA   P L     +  P         M+ S   
Sbjct: 506  GLPGRQGSKGDLGLPGWLGTKGDPGPPGAEGPPGLPGKHGASGPPGNKGAKGDMVVSRVK 565

Query: 378  SYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQ 437
             +     P  PP  P QP S      A   G     G       G +     P       
Sbjct: 566  GHKGERGPDGPPGFPGQPGSHGRDGHAGEKGDPGPPGDHEDATPGGK---GFPGPLGPPG 622

Query: 438  RSHPAMSPGT--PGPTMGRSQ-GSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG----- 489
            ++ P   PG   PGP   R   G P  P V     L G   +  S    +  YPG     
Sbjct: 623  KAGPVGPPGLGFPGPPGERGHPGVPGHPGVRGPDGLKGQKGDTIS---CNVTYPGRHGPP 679

Query: 490  GSYGPPGPQRYPIGIQGR-----------TPGAMAGMQYP-------QQQDSGDATWKET 531
            G  GPPGP+ +P G QG             PG     + P          D G    K +
Sbjct: 680  GFDGPPGPKGFP-GPQGAPGLSGSDGHKGRPGTPGTAEIPGPPGFRGDMGDPGFGGEKGS 738

Query: 532  FWLMPP-QYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQY----LPSQSQQRYQPQQDM 586
              + PP   G  GV+G      Q      P   HL P  +     +P     R  P    
Sbjct: 739  SPVGPPGPPGSPGVNG------QKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRGDPGCPG 792

Query: 587  SQ--------------EGYGTRSQPPLAPGKPNHEDLNLIQQERPS-----SLPDLSGSI 627
            ++              +G    +  P  PG P H      ++  P       LP   GS 
Sbjct: 793  AEGPAGIPGFLGLKGPKGREGHAGFPGVPGPPGHS----CERGAPGIPGQPGLPGYPGS- 847

Query: 628  DDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVG 687
               P G        V   G    +G    P +     H  P L  IPG      +  P G
Sbjct: 848  PGAPGGKGQ--PGDVGPPGPAGMKGLPGLPGRP--GAHGPPGLPGIPGPFGDDGLPGPPG 903

Query: 688  SNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQY 747
                R  P  P   PG +  P   G             S +P +RG          +   
Sbjct: 904  PKGPRGLPGFP-GFPGERGKPGAEGCPGAKGEPGEKGMSGLPGDRGLRGA---KGAIGPP 959

Query: 748  GPQQTGPSMSPHPSPGGQMHAGISSFQ-QSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPS 806
            G +     +S   +PG     G   F  +    GT G Q  + G  G Y  P  + G P 
Sbjct: 960  GDEGEMAIISQKGTPGEPGPPGDDGFPGERGDKGTPGMQ-GRRGEPGRYGPPGFHRGEPG 1018

Query: 807  ASYSGPGPGMGISANNQMHGQGPSQPCGAVPL-------GRMPSAGMQNRPFPGNMSSMT 859
                 PGP             GP  P G+  L       G     G    P P   S + 
Sbjct: 1019 EK-GQPGP------------PGPPGPPGSTGLRGFIGFPGLPGDQGEPGSPGPPGFSGID 1065

Query: 860  PSSPGMSQQGGPG--MGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMAS 917
             +      +G P    GPP P    K +  +               G F    + GL   
Sbjct: 1066 GARGPKGNKGDPASHFGPPGP----KGEPGSPGC-----------PGHFGASGEQGLPGI 1110

Query: 918  SSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEE 977
              P   P            PP S  P          GL     PGE   P P    G + 
Sbjct: 1111 QGPRGSP--------GRPGPPGSSGPPGCPGDHGMPGLRG--QPGEMGDPGPRGLQG-DP 1159

Query: 978  GTPQPESKSKKSSSSTTTG 996
            G P P      S S    G
Sbjct: 1160 GIPGPPGIKGPSGSPGLNG 1178



 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 67/219 (30%), Positives = 74/219 (33%), Gaps = 25/219 (11%)

Query: 84   GAGGGAPQPGPDMEQP-QHGGAKDSAAGGQADPPGPP-----LLSKPGDED-DAPPKMGE 136
            GA G AP+  PD   P   G        G   PPG P     L  +PGD     PP    
Sbjct: 1245 GATGRAPKDIPDPGPPGDQGPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPPG 1304

Query: 137  PAG--GRYEHPGLGALGTQQPPVAVPGGGG-----GPAAVPEFNNYYGSAAPAS-GGPGG 188
            P G  G    PG      Q+ PV  PG  G     GP          G   P    GP G
Sbjct: 1305 PPGPPGYKGFPGCDGKDGQKGPVGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPRG 1364

Query: 189  RAGPCFDQHGGQQSPGM----GMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ----CNHY 240
              GP  D     + PG+    GM       A G PG   P     +G P        +  
Sbjct: 1365 EPGPPADVDDCPRIPGLPGAPGMR--GPEGAMGLPGMRGPSGPGCKGEPGLDGRRGVDGV 1422

Query: 241  PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAG 279
            PG   P    G  G  G  GG G  G  G  G  G G G
Sbjct: 1423 PGSPGPPGRKGDTGEDGYPGGPGPPGPIGDPGPKGFGPG 1461



 Score = 39.7 bits (91), Expect = 0.033
 Identities = 114/495 (23%), Positives = 148/495 (29%), Gaps = 98/495 (19%)

Query: 84   GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDED--------DAPPKMG 135
            G  G   +PG       H G  +    GQ  PPGPP    PG             P   G
Sbjct: 996  GMQGRRGEPGRYGPPGFHRG--EPGEKGQPGPPGPP--GPPGSTGLRGFIGFPGLPGDQG 1051

Query: 136  EPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPC-F 194
            EP  G    PG   +   + P    G  G PA+      ++G   P  G PG    P  F
Sbjct: 1052 EP--GSPGPPGFSGIDGARGP---KGNKGDPAS------HFGPPGP-KGEPGSPGCPGHF 1099

Query: 195  DQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNH-YPGY-SRPGAGGGG 252
               G Q  PG+           G+PG   P  +S  G P    +H  PG   +PG  G  
Sbjct: 1100 GASGEQGLPGI-------QGPRGSPGRPGPPGSS--GPPGCPGDHGMPGLRGQPGEMGDP 1150

Query: 253  GGGG--GGGGGSGGGGGGGGAGAGGAGA-----GAVAAAAAAAAAAAGGGGGGGYGGSSA 305
            G  G  G  G  G  G  G +G+ G        G      A+     G  G  G  G   
Sbjct: 1151 GPRGLQGDPGIPGPPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVGPPGPVGIPGLKG 1210

Query: 306  GYGVLSSP--RQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQ 363
              G   SP     G     GP G   +S     AG+     +             P  + 
Sbjct: 1211 ERGDPGSPGISPPGPRGKKGPPGPPGSSGPPGPAGATGRAPKDIPDPGPPGDQGPPGPDG 1270

Query: 364  LLTSPSP--------MMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM 415
               +P P        ++R   G       P  PP PP  P  +         GQ+   G 
Sbjct: 1271 PRGAPGPPGLPGSVDLLRGEPGDCG-LPGPPGPPGPPGPPGYKGFPGCDGKDGQKGPVGF 1329

Query: 416  ----------------------------GLGKDMGAQYAAAS-------PAWAAAQQRSH 440
                                        GL    G     A        P    A     
Sbjct: 1330 PGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPRGEPGPPADVDDCPRIPGLPGAPGMRG 1389

Query: 441  PAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSS---------PYPGGS 491
            P  + G PG       G   +P +  R  + G+  +P    ++           P P G 
Sbjct: 1390 PEGAMGLPGMRGPSGPGCKGEPGLDGRRGVDGVPGSPGPPGRKGDTGEDGYPGGPGPPGP 1449

Query: 492  YGPPGPQRYPIGIQG 506
             G PGP+ +  G  G
Sbjct: 1450 IGDPGPKGFGPGYLG 1464


>gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo
            sapiens]
          Length = 1494

 Score = 89.0 bits (219), Expect = 5e-17
 Identities = 241/920 (26%), Positives = 291/920 (31%), Gaps = 185/920 (20%)

Query: 80   NSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAG 139
            + + G  G    PGP  E    G   D        PPG P    PG    A P  G P  
Sbjct: 568  DGIPGTPGVKGLPGPKGELALSGEKGDQG------PPGDP--GSPGSPGPAGPA-GPPGY 618

Query: 140  GRYEHPGLGALGTQQPPVAVPGGGGGPA-AVPEFNNYYGSAAPASGGPGGRAGPCFDQHG 198
            G    PGL   GTQ     VPG  G P  A P       +  P   GP G  G     H 
Sbjct: 619  GPQGEPGLQ--GTQ----GVPGAPGPPGEAGPRGELSVSTPVPGPPGPPGPPG-----HP 667

Query: 199  GQQSPGMGMMHSASAAAAGAPGSM----DPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGG 254
            G Q P             G PGS+    DP     +G P      +PG   P    G  G
Sbjct: 668  GPQGP------------PGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPG 715

Query: 255  GGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPR 314
              G  G  G  G  G  G  G   GA    A A     G  G  G  G+S  +G +  P 
Sbjct: 716  TKGSLGCPGKMGEPGLPGKPGL-PGAKGEPAVAMPGGPGTPGFPGERGNSGEHGEIGLPG 774

Query: 315  QQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN-QHPSGAT--PTLNQLLTS---- 367
              G  +   PG  G              G Q   G+  + P GA   P LN L       
Sbjct: 775  LPG--LPGTPGNEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRR 832

Query: 368  --------PSPMMRSYGGSYPEYSSPSAPPPPPSQ-PQSQAAAAG----AAAGGQQAAAG 414
                    P        G   E  SP  P       P  Q    G        G+    G
Sbjct: 833  GKTGPKGDPGIPGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIG 892

Query: 415  MGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPG-------PTMGRSQGSPMDPMVMK- 466
            M     MG   A   P             SPG PG       P     QG   +P   + 
Sbjct: 893  M-----MGFPGAIGPPGPPGNPGTPGQRGSPGIPGVKGQRGTPGAKGEQGDKGNPGPSEI 947

Query: 467  --------RPQLYGMGSNPHSQPQQSSP-YPG--------GSYGPPGPQRYPIGIQGRT- 508
                     P L G   NP  +  +  P  PG        G  GPPGP R  +G  G   
Sbjct: 948  SHVIGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGP-RGDLGSTGNPG 1006

Query: 509  -------PGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSG-YCQQGQ--QPYYSQ 558
                   PG+M  M  P  +       K      P + G+ G+ G +  QG   +P YS+
Sbjct: 1007 EPGLRGIPGSMGNMGMPGSKG------KRGTLGFPGRAGRPGLPGIHGLQGDKGEPGYSE 1060

Query: 559  QPQP-PHLPPQAQYLPSQSQQRYQPQQD--------MSQEGYGTRSQPPLAPGKPN-HED 608
              +P P  P     LP    ++ +  Q            EG       P  PGKP  H D
Sbjct: 1061 GTRPGPPGPTGDPGLPGDMGKKGEMGQPGPPGHLGPAGPEGAPGSPGSPGLPGKPGPHGD 1120

Query: 609  LNLIQQER---------PSSLPDLSGSIDDLPTGTEAT-----LSSAVSASGST----SS 650
            L     +          P  LP   GS    P G         +       G T    + 
Sbjct: 1121 LGFKGIKGLLGPPGIRGPPGLPGFPGSPG--PMGIRGDQGRDGIPGPAGEKGETGLLRAP 1178

Query: 651  QGDQSNP-AQSPFSPHASPHLSSIPG-----------GPS-----PSPVGSP---VGSNQ 690
             G + NP AQ       +P    +PG           GP+     P P G P   +    
Sbjct: 1179 PGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPRGPTGIEGFPGPPGLPGAIIPGQT 1238

Query: 691  SRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQS-PMPQERGFMAGTQRNPQMAQYGP 749
               GP      PG+  PP PPGS          S   P P+     AG    P   + G 
Sbjct: 1239 GNRGPPGSRGSPGAPGPPGPPGSHVIGIKGDKGSMGHPGPKGPPGTAGDMGPP--GRLGA 1296

Query: 750  QQTGPSMSPHPSPGGQMHAGISSFQQSNSS--GTYGPQMSQYGPQGNYSRPPAYSGVPSA 807
              T     P   PG Q   G+   ++ N    G+ GP     GP+G    PP   G P  
Sbjct: 1297 PGTPGLPGPRGDPGFQGFPGVKG-EKGNPGFLGSIGPP-GPIGPKG----PPGVRGDPGT 1350

Query: 808  ----SYSG-PGPGMGISANNQMHGQ-GPSQPCGAV----PLGRMPSAGMQNRPFP----G 853
                S  G PGP  G      M G+ GP  P G +    P G+    G    P P    G
Sbjct: 1351 LKIISLPGSPGP-PGTPGEPGMQGEPGPPGPPGNLGPCGPRGKPGKDGKPGTPGPAGEKG 1409

Query: 854  NMSSMTPSSPGMSQQGGPGM 873
            N  S     P  S  G PG+
Sbjct: 1410 NKGSKGEPGPAGS-DGLPGL 1428



 Score = 75.1 bits (183), Expect = 7e-13
 Identities = 162/681 (23%), Positives = 207/681 (30%), Gaps = 144/681 (21%)

Query: 79   NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPK--MGE 136
            N  L G  G   QPGP  EQ   G   +   G Q  P    L  + G      PK   G 
Sbjct: 784  NEGLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGDPGI 843

Query: 137  PAGGRYEHPG-------------LGALGTQ----QPPVAVPGGGGGPAAVPEFNNYYGSA 179
            P   R   PG             +G LG +     P +  P G  G   +  F    G  
Sbjct: 844  PGLDRSGFPGETGSPGIPGHQGEMGPLGQRGYPGNPGILGPPGEDGVIGMMGFPGAIGPP 903

Query: 180  APAS--GGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPN-SQ 236
             P    G PG R  P      GQ+               G PG+    +   +G P  S+
Sbjct: 904  GPPGNPGTPGQRGSPGIPGVKGQR---------------GTPGAKG--EQGDKGNPGPSE 946

Query: 237  CNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG 296
             +H  G        G  G  G  G  G  G  G  G  G    A          + G  G
Sbjct: 947  ISHVIGDKGEPGLKGFAGNPGEKGNRGVPGMPGLKGLKGLPGPAGPPGPRGDLGSTGNPG 1006

Query: 297  GGGYGGSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLSKAAAGSAAGGFQRFAGQNQHPS 355
              G  G     G +  P  +G    +G PG  G   L          G Q   G+  +  
Sbjct: 1007 EPGLRGIPGSMGNMGMPGSKGKRGTLGFPGRAGRPGL------PGIHGLQGDKGEPGYSE 1060

Query: 356  GATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAG- 414
            G  P                            PP P   P            GQ    G 
Sbjct: 1061 GTRP---------------------------GPPGPTGDPGLPGDMGKKGEMGQPGPPGH 1093

Query: 415  MGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGP--TMGRS--QGSPMDPMVMKRPQL 470
            +G     GA  +  SP              PG PGP   +G    +G    P +   P L
Sbjct: 1094 LGPAGPEGAPGSPGSPG------------LPGKPGPHGDLGFKGIKGLLGPPGIRGPPGL 1141

Query: 471  YGMGSNP------HSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSG 524
             G   +P        Q +   P P G  G  G  R P G +G  PGA        + D G
Sbjct: 1142 PGFPGSPGPMGIRGDQGRDGIPGPAGEKGETGLLRAPPGPRG-NPGAQGA-----KGDRG 1195

Query: 525  DATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQ 584
               +       P   G++G  G             P PP LP     +P Q+  R  P  
Sbjct: 1196 APGF-------PGLPGRKGAMGDAGPRGPTGIEGFPGPPGLP--GAIIPGQTGNRGPP-- 1244

Query: 585  DMSQEGYGTRSQP--PLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLS--S 640
                   G+R  P  P  PG P    + +   +     P   G     P GT   +    
Sbjct: 1245 -------GSRGSPGAPGPPGPPGSHVIGIKGDKGSMGHPGPKG-----PPGTAGDMGPPG 1292

Query: 641  AVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPS-------PSPVGSPVGSNQSRS 693
             + A G+    G + +P    F     P +    G P        P P+G P G    R 
Sbjct: 1293 RLGAPGTPGLPGPRGDPGFQGF-----PGVKGEKGNPGFLGSIGPPGPIG-PKGPPGVRG 1346

Query: 694  GP--ISPASIPGSQMPPQPPG 712
             P  +   S+PGS  PP  PG
Sbjct: 1347 DPGTLKIISLPGSPGPPGTPG 1367



 Score = 72.8 bits (177), Expect = 4e-12
 Identities = 217/911 (23%), Positives = 283/911 (31%), Gaps = 207/911 (22%)

Query: 106 DSAAG--GQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGG 163
           D A G  G+   PGPP    PG +    P+      G    PGL       P +    G 
Sbjct: 42  DGAKGEKGEKGFPGPP--GSPGQKGFTGPEGLPGPQGPKGFPGL-------PGLTGSKGV 92

Query: 164 GGPAAVPEFNNYYG-SAAPASGGPGGRAGP--CFDQHGGQQSPGM-------GMMHSASA 213
            G + +P F+   G    P + GP G  G   C    G Q  PG+       G+  +A  
Sbjct: 93  RGISGLPGFSGSPGLPGTPGNTGPYGLVGVPGCSGSKGEQGFPGLPGTLGYPGIPGAAGL 152

Query: 214 AAA-GAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAG 272
               GAP   + ++   +G P       PG   P    G  G  G  G  G  G  G  G
Sbjct: 153 KGQKGAPAKEEDIELDAKGDPG-----LPGAPGPQGLPGPPGFPGPVGPPGPPGFFGFPG 207

Query: 273 AGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV----LSSPRQQGG--------GM 320
           A G   G             G  G  G  G     G     L+ P  +          G 
Sbjct: 208 AMGP-RGPKGHMGERVIGHKGERGVKGLTGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGA 266

Query: 321 MMGPGGGGAASLSKAAAGSAAG-----GFQRFAGQNQHPS-----------------GAT 358
           M  PG  G + L   + GS  G     G Q   G++  P                  G  
Sbjct: 267 MGEPGPPGPSGLPGESYGSEKGAPGDPGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMGED 326

Query: 359 PTLNQLLTSPSPMMRS---YGGSYPEYSSPSAPPPP----------PSQPQSQAAAAGAA 405
               Q      P  R    Y  +Y E      P PP          PS P     + G++
Sbjct: 327 GIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGPRGARGPQGPSGPPGVPGSPGSS 386

Query: 406 AGGQQAAAGM-GL----------GKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGR 454
             G + A G  GL          GKD  A     SP  A +         PG PG  + R
Sbjct: 387 RPGLRGAPGWPGLKGSKGERGRPGKD--AMGTPGSPGCAGSPGLPGSPGPPGPPGDIVFR 444

Query: 455 SQGSPMD---PMVMKRPQLYGMGSNPHSQPQ---QSSPYPGGSYGPPGPQRYPIGIQGRT 508
            +G P D   P  +  P + G+   P  +P       PY  G  G PG            
Sbjct: 445 -KGPPGDHGLPGYLGSPGIPGV-DGPKGEPGLLCTQCPYIPGPPGLPG-----------L 491

Query: 509 PGAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQ 568
           PG       P                     G+QG +G       P  +  P  P  P  
Sbjct: 492 PGLHGVKGIP---------------------GRQGAAGLKGSPGSPGNTGLPGFPGFPG- 529

Query: 569 AQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSID 628
           AQ  P    ++ +  Q   Q   G    P L  G+P  + L+ I       +  L G   
Sbjct: 530 AQGDPGLKGEKGETLQPEGQ--VGVPGDPGLR-GQPGRKGLDGIPGT--PGVKGLPGPKG 584

Query: 629 DLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSS---IPGGPSP------ 679
           +L    E          GS  S G         + P   P L     +PG P P      
Sbjct: 585 ELALSGEKGDQGPPGDPGSPGSPGPAGPAGPPGYGPQGEPGLQGTQGVPGAPGPPGEAGP 644

Query: 680 -------SPVGSPVG--SNQSRSGPISPASIPGS-----------------------QMP 707
                  +PV  P G        GP  P  IPGS                         P
Sbjct: 645 RGELSVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIPGIGFPGP 704

Query: 708 PQP------PGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPS 761
           P P      PG++        + +  +P + G + G +  P +A  G    GP     P 
Sbjct: 705 PGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPG-LPGAKGEPAVAMPG----GPGTPGFPG 759

Query: 762 PGGQM--HAGISSFQQSNSSGTYGPQMSQYGPQGNYSR--PPAYSGVPSASYSGPGPGMG 817
             G    H  I         GT G +    GP+G+  +  PP   G P     GP    G
Sbjct: 760 ERGNSGEHGEIGLPGLPGLPGTPGNE-GLDGPRGDPGQPGPPGEQGPPGRCIEGPRGAQG 818

Query: 818 ISANNQMHGQ-------GPSQPCGAVPLGRMPSAGMQNRP-FPGNMSSMTPSSPGMSQQG 869
           +   N + GQ       GP    G   L R    G    P  PG+   M P    + Q+G
Sbjct: 819 LPGLNGLKGQQGRRGKTGPKGDPGIPGLDRSGFPGETGSPGIPGHQGEMGP----LGQRG 874

Query: 870 GPG----MGPP 876
            PG    +GPP
Sbjct: 875 YPGNPGILGPP 885



 Score = 70.9 bits (172), Expect = 1e-11
 Identities = 202/860 (23%), Positives = 267/860 (31%), Gaps = 174/860 (20%)

Query: 88  GAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-------------LLSKPGDEDDAPPK- 133
           GAP    D+E    G      A G    PGPP                 PG      PK 
Sbjct: 157 GAPAKEEDIELDAKGDPGLPGAPGPQGLPGPPGFPGPVGPPGPPGFFGFPGAMGPRGPKG 216

Query: 134 -MGEPAGGRYEHPGL-GALGTQQPPVAVPGGGGGPAAVPEFNNYYG-SAAPASGGPGGRA 190
            MGE   G     G+ G  G   PP  V     GP    +     G   A    GP G +
Sbjct: 217 HMGERVIGHKGERGVKGLTGPPGPPGTVIVTLTGPDNRTDLKGEKGDKGAMGEPGPPGPS 276

Query: 191 GPCFDQHGGQQSPGMGMMHSASAAAAGAPGSM-DPLQNSHEGYPNSQ----CNHYPG-YS 244
           G   + +G ++             A G PG    P ++   G+P S+       +PG   
Sbjct: 277 GLPGESYGSEK------------GAPGDPGLQGKPGKDGVPGFPGSEGVKGNRGFPGLMG 324

Query: 245 RPGAGGGGGGGGGGG--------------GGSGGGGGGGGAGAGG--AGAGAVAAAAAAA 288
             G  G  G  G  G              G  G  G  G  GA G    +G      +  
Sbjct: 325 EDGIKGQKGDIGPPGFRGPTEYYDTYQEKGDEGTPGPPGPRGARGPQGPSGPPGVPGSPG 384

Query: 289 AAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFA 348
           ++  G  G  G+ G     G    P +   G    PG  G+  L  +       G   F 
Sbjct: 385 SSRPGLRGAPGWPGLKGSKGERGRPGKDAMGTPGSPGCAGSPGLPGSPGPPGPPGDIVF- 443

Query: 349 GQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAP--PPPPSQPQSQAAAAGAAA 406
              + P G       L +   P +    G  P       P  P PP  P           
Sbjct: 444 --RKGPPGDHGLPGYLGSPGIPGVDGPKGE-PGLLCTQCPYIPGPPGLPGLPGLHGVKGI 500

Query: 407 GGQQAAAGM-GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTM--GRSQGSPMDPM 463
            G+Q AAG+ G     G       P +  AQ    P +  G  G T+      G P DP 
Sbjct: 501 PGRQGAAGLKGSPGSPGNTGLPGFPGFPGAQ--GDPGLK-GEKGETLQPEGQVGVPGDPG 557

Query: 464 VMKRPQLYGMGSNPHSQPQQSSPYP---------GGSYGPPGPQRYPIGIQGRTPGAMAG 514
           +  +P   G+   P +   +  P P          G  GPPG    P G  G  P   AG
Sbjct: 558 LRGQPGRKGLDGIPGTPGVKGLPGPKGELALSGEKGDQGPPGDPGSP-GSPG--PAGPAG 614

Query: 515 MQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPS 574
                                PP YG QG  G   QG Q             P A   P 
Sbjct: 615 ---------------------PPGYGPQGEPGL--QGTQGV-----------PGAPGPPG 640

Query: 575 QSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDD--LPT 632
           ++  R +        G      PP  PG P H        + P  +P   G   D  LP 
Sbjct: 641 EAGPRGELSVSTPVPG------PPGPPGPPGHPG-----PQGPPGIPGSLGKCGDPGLPG 689

Query: 633 GTEATLSSAVSASGSTSSQGDQSNP-AQSPFSPHASPHLSSIPGGPS-PSPVGSPVGSNQ 690
                    +   G    +GDQ  P  +             +PG P  P   G P     
Sbjct: 690 PDGEPGIPGIGFPGPPGPKGDQGFPGTKGSLGCPGKMGEPGLPGKPGLPGAKGEPA---- 745

Query: 691 SRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQM--AQYG 748
                    ++PG    P  PG +  S  H  +    +P     + GT  N  +   +  
Sbjct: 746 --------VAMPGGPGTPGFPGERGNSGEHGEIGLPGLPG----LPGTPGNEGLDGPRGD 793

Query: 749 PQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQ--MSQYGPQGNYSRPPAYSGVPS 806
           P Q GP     P PG  +     +      +G  G Q    + GP+G+    P   G+  
Sbjct: 794 PGQPGPPGEQGP-PGRCIEGPRGAQGLPGLNGLKGQQGRRGKTGPKGD----PGIPGLDR 848

Query: 807 ASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPG-- 864
           + + G     GI  +     QG   P G              R +PGN   + P  PG  
Sbjct: 849 SGFPGETGSPGIPGH-----QGEMGPLG-------------QRGYPGNPGILGP--PGED 888

Query: 865 --MSQQGGPG-MGPPMPTVN 881
             +   G PG +GPP P  N
Sbjct: 889 GVIGMMGFPGAIGPPGPPGN 908


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.129    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,549,811
Number of Sequences: 37866
Number of extensions: 7807629
Number of successful extensions: 157798
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1373
Number of HSP's successfully gapped in prelim test: 2226
Number of HSP's that attempted gapping in prelim test: 51110
Number of HSP's gapped (non-prelim): 51652
length of query: 2191
length of database: 18,247,518
effective HSP length: 118
effective length of query: 2073
effective length of database: 13,779,330
effective search space: 28564551090
effective search space used: 28564551090
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 70 (31.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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