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Search of human proteins with 40068462
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
(2178 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 4493 0.0
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 4484 0.0
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 4468 0.0
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 2071 0.0
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 1818 0.0
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 118 7e-26
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 116 2e-25
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 115 5e-25
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 115 6e-25
gi|48762934 alpha 2 type I collagen [Homo sapiens] 111 9e-24
gi|5453638 AT rich interactive domain 3B [Homo sapiens] 106 3e-22
gi|57864582 hornerin [Homo sapiens] 105 5e-22
gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ... 104 8e-22
gi|62122917 filaggrin family member 2 [Homo sapiens] 102 4e-21
gi|55750053 atrophin-1 [Homo sapiens] 102 4e-21
gi|55750041 atrophin-1 [Homo sapiens] 102 4e-21
gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo s... 102 5e-21
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 101 7e-21
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 100 1e-20
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 100 1e-20
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 100 1e-20
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 100 2e-20
gi|109255251 loricrin [Homo sapiens] 99 3e-20
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 97 1e-19
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 97 1e-19
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 97 2e-19
gi|55956910 meningioma 1 [Homo sapiens] 96 3e-19
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 96 3e-19
gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens] 96 4e-19
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 95 7e-19
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo
sapiens]
Length = 2178
Score = 4493 bits (11653), Expect = 0.0
Identities = 2178/2178 (100%), Positives = 2178/2178 (100%)
Query: 1 METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60
METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ
Sbjct: 1 METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60
Query: 61 QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120
QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL
Sbjct: 61 QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120
Query: 121 LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180
LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA
Sbjct: 121 LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180
Query: 181 PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240
PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY
Sbjct: 181 PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240
Query: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
Query: 301 GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT
Sbjct: 301 GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
Query: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD
Sbjct: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
Query: 421 MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ
Sbjct: 421 MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
Query: 481 PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQ 540
PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQ
Sbjct: 481 PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQ 540
Query: 541 PYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQ 600
PYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQ
Sbjct: 541 PYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQ 600
Query: 601 QERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSI 660
QERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSI
Sbjct: 601 QERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSI 660
Query: 661 PGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG 720
PGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG
Sbjct: 661 PGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG 720
Query: 721 FMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQG 780
FMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQG
Sbjct: 721 FMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQG 780
Query: 781 NYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPG 840
NYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPG
Sbjct: 781 NYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPG 840
Query: 841 NMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSG 900
NMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSG
Sbjct: 841 NMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSG 900
Query: 901 LMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKAD 960
LMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKAD
Sbjct: 901 LMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKAD 960
Query: 961 GKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLP 1020
GKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLP
Sbjct: 961 GKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLP 1020
Query: 1021 AVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFA 1080
AVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFA
Sbjct: 1021 AVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFA 1080
Query: 1081 FECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLK 1140
FECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLK
Sbjct: 1081 FECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLK 1140
Query: 1141 PPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMG 1200
PPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMG
Sbjct: 1141 PPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMG 1200
Query: 1201 RMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPY 1260
RMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPY
Sbjct: 1201 RMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPY 1260
Query: 1261 GASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDM 1320
GASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDM
Sbjct: 1261 GASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDM 1320
Query: 1321 YNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGP 1380
YNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGP
Sbjct: 1321 YNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGP 1380
Query: 1381 LQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQ 1440
LQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQ
Sbjct: 1381 LQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQ 1440
Query: 1441 WPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSK 1500
WPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSK
Sbjct: 1441 WPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSK 1500
Query: 1501 SPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDI 1560
SPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDI
Sbjct: 1501 SPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDI 1560
Query: 1561 VTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCL 1620
VTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCL
Sbjct: 1561 VTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCL 1620
Query: 1621 IDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDDDEEDEEDEEED 1680
IDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDDDEEDEEDEEED
Sbjct: 1621 IDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDDDEEDEEDEEED 1680
Query: 1681 SEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQE 1740
SEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQE
Sbjct: 1681 SEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQE 1740
Query: 1741 FNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKEQEGKGDSEEQQEK 1800
FNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKEQEGKGDSEEQQEK
Sbjct: 1741 FNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKEQEGKGDSEEQQEK 1800
Query: 1801 SIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKLLEDEPRSRDETPL 1860
SIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKLLEDEPRSRDETPL
Sbjct: 1801 SIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKLLEDEPRSRDETPL 1860
Query: 1861 CTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRA 1920
CTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRA
Sbjct: 1861 CTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRA 1920
Query: 1921 PQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDG 1980
PQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDG
Sbjct: 1921 PQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDG 1980
Query: 1981 LLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKF 2040
LLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKF
Sbjct: 1981 LLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKF 2040
Query: 2041 YATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQ 2100
YATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQ
Sbjct: 2041 YATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQ 2100
Query: 2101 YQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVL 2160
YQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVL
Sbjct: 2101 YQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVL 2160
Query: 2161 NSLVASVICDVLFQIGQL 2178
NSLVASVICDVLFQIGQL
Sbjct: 2161 NSLVASVICDVLFQIGQL 2178
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 [Homo
sapiens]
Length = 2191
Score = 4484 bits (11629), Expect = 0.0
Identities = 2178/2191 (99%), Positives = 2178/2191 (99%), Gaps = 13/2191 (0%)
Query: 1 METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60
METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ
Sbjct: 1 METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60
Query: 61 QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120
QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL
Sbjct: 61 QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120
Query: 121 LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180
LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA
Sbjct: 121 LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180
Query: 181 PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240
PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY
Sbjct: 181 PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240
Query: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
Query: 301 GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT
Sbjct: 301 GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
Query: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD
Sbjct: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
Query: 421 MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ
Sbjct: 421 MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
Query: 481 PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQ-------------MPPQYG 527
PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQ MPPQYG
Sbjct: 481 PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMPPQYG 540
Query: 528 QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA 587
QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA
Sbjct: 541 QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA 600
Query: 588 PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS 647
PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS
Sbjct: 601 PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS 660
Query: 648 PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH 707
PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH
Sbjct: 661 PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSH 720
Query: 708 PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 767
PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG
Sbjct: 721 PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 780
Query: 768 TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 827
TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR
Sbjct: 781 TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 840
Query: 828 MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ 887
MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ
Sbjct: 841 MPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ 900
Query: 888 SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS 947
SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS
Sbjct: 901 SRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMS 960
Query: 948 PGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLT 1007
PGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLT
Sbjct: 961 PGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLT 1020
Query: 1008 FMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAA 1067
FMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAA
Sbjct: 1021 FMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAA 1080
Query: 1068 SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQST 1127
SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQST
Sbjct: 1081 SSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQST 1140
Query: 1128 GSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNA 1187
GSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNA
Sbjct: 1141 GSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNA 1200
Query: 1188 PYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAM 1247
PYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAM
Sbjct: 1201 PYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAM 1260
Query: 1248 SNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDG 1307
SNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDG
Sbjct: 1261 SNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDG 1320
Query: 1308 MYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQI 1367
MYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQI
Sbjct: 1321 MYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQI 1380
Query: 1368 QTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDD 1427
QTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDD
Sbjct: 1381 QTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDD 1440
Query: 1428 MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1487
MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS
Sbjct: 1441 MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1500
Query: 1488 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQP 1547
FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQP
Sbjct: 1501 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQP 1560
Query: 1548 VLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSG 1607
VLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSG
Sbjct: 1561 VLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSG 1620
Query: 1608 FLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECI 1667
FLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECI
Sbjct: 1621 FLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECI 1680
Query: 1668 DDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLF 1727
DDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLF
Sbjct: 1681 DDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLF 1740
Query: 1728 VVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKE 1787
VVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKE
Sbjct: 1741 VVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKE 1800
Query: 1788 QEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKL 1847
QEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKL
Sbjct: 1801 QEGKGDSEEQQEKSIIATIDDVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKL 1860
Query: 1848 LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKL 1907
LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKL
Sbjct: 1861 LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKL 1920
Query: 1908 ILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS 1967
ILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS
Sbjct: 1921 ILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS 1980
Query: 1968 AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL 2027
AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL
Sbjct: 1981 AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL 2040
Query: 2028 ILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGN 2087
ILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGN
Sbjct: 2041 ILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGN 2100
Query: 2088 LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH 2147
LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH
Sbjct: 2101 LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH 2160
Query: 2148 EGRLLDISISAVLNSLVASVICDVLFQIGQL 2178
EGRLLDISISAVLNSLVASVICDVLFQIGQL
Sbjct: 2161 EGRLLDISISAVLNSLVASVICDVLFQIGQL 2191
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo
sapiens]
Length = 2231
Score = 4468 bits (11589), Expect = 0.0
Identities = 2178/2231 (97%), Positives = 2178/2231 (97%), Gaps = 53/2231 (2%)
Query: 1 METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60
METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ
Sbjct: 1 METGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQ 60
Query: 61 QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120
QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL
Sbjct: 61 QQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPL 120
Query: 121 LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180
LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA
Sbjct: 121 LSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180
Query: 181 PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240
PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY
Sbjct: 181 PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHY 240
Query: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY
Sbjct: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
Query: 301 GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT
Sbjct: 301 GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
Query: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD
Sbjct: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
Query: 421 MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ
Sbjct: 421 MGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQ 480
Query: 481 PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQ 540
PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQ
Sbjct: 481 PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQ 540
Query: 541 PYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQ 600
PYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQ
Sbjct: 541 PYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQ 600
Query: 601 QERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSI 660
QERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSI
Sbjct: 601 QERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSI 660
Query: 661 PGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG 720
PGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG
Sbjct: 661 PGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG 720
Query: 721 FMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQG 780
FMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQG
Sbjct: 721 FMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQG 780
Query: 781 NYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPG 840
NYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPG
Sbjct: 781 NYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPG 840
Query: 841 NMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSG 900
NMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSG
Sbjct: 841 NMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSG 900
Query: 901 LMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKAD 960
LMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKAD
Sbjct: 901 LMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKAD 960
Query: 961 GKEEGTPQPESKSK---------------------------------------------- 974
GKEEGTPQPESKSK
Sbjct: 961 GKEEGTPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGW 1020
Query: 975 -------KSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPL 1027
KSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPL
Sbjct: 1021 PKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPL 1080
Query: 1028 DLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIER 1087
DLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIER
Sbjct: 1081 DLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIER 1140
Query: 1088 GEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPAST 1147
GEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPAST
Sbjct: 1141 GEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPAST 1200
Query: 1148 PHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPN 1207
PHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPN
Sbjct: 1201 PHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPN 1260
Query: 1208 KDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRR 1267
KDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRR
Sbjct: 1261 KDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRR 1320
Query: 1268 HEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSS 1327
HEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSS
Sbjct: 1321 HEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSS 1380
Query: 1328 QQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSE 1387
QQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSE
Sbjct: 1381 QQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSE 1440
Query: 1388 GPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQ 1447
GPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQ
Sbjct: 1441 GPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQ 1500
Query: 1448 RQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPSM 1507
RQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPSM
Sbjct: 1501 RQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPSM 1560
Query: 1508 KMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWR 1567
KMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWR
Sbjct: 1561 KMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWR 1620
Query: 1568 VMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGIL 1627
VMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGIL
Sbjct: 1621 VMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGIL 1680
Query: 1628 MEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDDDEEDEEDEEEDSEKTESD 1687
MEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDDDEEDEEDEEEDSEKTESD
Sbjct: 1681 MEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDDDEEDEEDEEEDSEKTESD 1740
Query: 1688 EKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLH 1747
EKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLH
Sbjct: 1741 EKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLH 1800
Query: 1748 WQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKEQEGKGDSEEQQEKSIIATID 1807
WQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKEQEGKGDSEEQQEKSIIATID
Sbjct: 1801 WQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKEQEGKGDSEEQQEKSIIATID 1860
Query: 1808 DVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKLLEDEPRSRDETPLCTIAHWQ 1867
DVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKLLEDEPRSRDETPLCTIAHWQ
Sbjct: 1861 DVLSARPGALPEDANPGPQTESSKFPFGIQQAKSHRNIKLLEDEPRSRDETPLCTIAHWQ 1920
Query: 1868 DSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKE 1927
DSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKE
Sbjct: 1921 DSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKE 1980
Query: 1928 EDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVC 1987
EDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVC
Sbjct: 1981 EDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVC 2040
Query: 1988 PSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRY 2047
PSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRY
Sbjct: 2041 PSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRY 2100
Query: 2048 VGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHN 2107
VGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHN
Sbjct: 2101 VGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHN 2160
Query: 2108 LMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASV 2167
LMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASV
Sbjct: 2161 LMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASV 2220
Query: 2168 ICDVLFQIGQL 2178
ICDVLFQIGQL
Sbjct: 2221 ICDVLFQIGQL 2231
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 2071 bits (5366), Expect = 0.0
Identities = 1220/2362 (51%), Positives = 1444/2362 (61%), Gaps = 376/2362 (15%)
Query: 107 SAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGP 166
+AA +PP PP P + A + E AGG E A + A GP
Sbjct: 8 AAASSLGNPPPPP----PSELKKAEQQQREEAGG--EAAAAAAAERGEMKAAAGQESEGP 61
Query: 167 AAVPE--FNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
A P A ++GG GG GG A + G PG+
Sbjct: 62 AVGPPQPLGKELQDGAESNGGGGG---------GG-------------AGSGGGPGAEPD 99
Query: 225 LQNSH-EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGA----- 278
L+NS+ P N+ + P GGGGG G G A G G
Sbjct: 100 LKNSNGNAGPRPALNN--NLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRS 157
Query: 279 -GAVAAAAAAA-------------AAAAGGGGGG--GYGG---SSAGYG----------- 308
AVAAAAAA AA GGGGG Y G +S +G
Sbjct: 158 PSAVAAAAAAVFHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYP 217
Query: 309 ------------VLSSPRQQGGGMMMGPGGGGAASL-------SKAAAGSAAGGF--QRF 347
LSSPR GG PG G AA+ S A+A S++ F QRF
Sbjct: 218 NRSAYPPPAPAYALSSPR---GGT---PGSGAAAAAGSKPPPSSSASASSSSSSFAQQRF 271
Query: 348 ----------AGQNQHPSGATPTLNQLLTSPSPMMRSY----GGSYPEYSSPSAPPPPPS 393
AG ATPTLNQLLTSPS R Y GG Y P+
Sbjct: 272 GAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSA-RGYQGYPGGDYSGGPQDGGAGKGPA 330
Query: 394 QPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPA-MSPGTPG--- 449
SQ A AAA AA+G AQQRSH A MSPG+ G
Sbjct: 331 DMASQCWGAAAAAAAAAAASG-------------------GAQQRSHHAPMSPGSSGGGG 371
Query: 450 -PTMGRSQ-GSPMDPMVMKRPQLYGMGSNPHSQ-------PQQSSPYPGGSYGPPGPQRY 500
P Q SPMD M RPQ YG G+NP+SQ PQQ YPG YG PQRY
Sbjct: 372 QPLARTPQPSSPMDQMGKMRPQPYG-GTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRY 430
Query: 501 PI------------------------------GIQGRTPGAMAGMQYPQQQMPPQYGQQG 530
P+ G QG+TP +PQQQ PP Y QQ
Sbjct: 431 PMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPP-YSQQP 489
Query: 531 VS-------GYCQQGQ---------QPYYSQQP-------------------------QP 549
S Y QQ Q QP YSQQP QP
Sbjct: 490 PSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQP 549
Query: 550 PHLPPQAQ-----YLPSQ-------------------------SQQRYQPQQDMSQEGYG 579
P+ PQAQ P Q SQQR+ P Q++SQ+ +G
Sbjct: 550 PYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFG 609
Query: 580 TR--SQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSS 637
++ S P + K ED+NL Q RPSSLPDLSGSIDDLP GTE LS VS SG +SS
Sbjct: 610 SQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSS 669
Query: 638 QGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQP 697
QG+QSNPAQSPFSPH SPHL I G PSPSPVGSP QSRSGP+SPA++PG+QMPP+P
Sbjct: 670 QGEQSNPAQSPFSPHTSPHLPGIRG-PSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRP 728
Query: 698 PGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGI 757
P QS+S HP+++QS + Q+RG+M QRNPQM QY Q G ++SP GGQ+H G+
Sbjct: 729 PSGQSDSIMHPSMNQSSIAQDRGYM---QRNPQMPQYSSPQPGSALSPRQPSGGQIHTGM 785
Query: 758 SSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGIS---ANNQMHGQ 814
S+QQ NS G+YGPQ QYGPQG Y R P Y+ +P+A+Y G GI+ A QMHGQ
Sbjct: 786 GSYQQ-NSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQ 844
Query: 815 GPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEA 874
P G +P GRM A M NRP+ NM++M P Q G GM PP +NRK QE
Sbjct: 845 PGIPPYGTLPPGRMSHASMGNRPYGPNMANMPP-------QVGSGMCPPPGGMNRKTQET 897
Query: 875 AAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVN 934
A A M AANS Q+R +P MNQ G+M + PY Q +N+ + ++N Q PPYSM M N
Sbjct: 898 AVA-MHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMAN 956
Query: 935 SSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGN 994
+SA +MM G+ KL K + K +GTP+ ESKSKKSSSSTTT EKITK+YELG
Sbjct: 957 NSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGG 1016
Query: 995 EPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWREL 1054
EPERK+WVDRYL F EE+ +++LPAVG+KPLDL+RLYV VKEIGGL QVNKNKKWREL
Sbjct: 1017 EPERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWREL 1076
Query: 1055 ATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKK-QPKLQPPSPA 1113
ATNLNVGTSSSAASSLKKQYIQ L+AFECKIERGE+PPP++F+ D+KK QPK+QPPSPA
Sbjct: 1077 ATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPA 1136
Query: 1114 NSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQG-GRSSTISVHDPFSDV 1172
SGS+QGPQTPQST S+SMAE GDLKPPTPASTPH Q+ P+ G RS+++ + D F+D
Sbjct: 1137 GSGSMQGPQTPQST-SSSMAE-GGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDG 1194
Query: 1173 SDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPN 1232
SDS+F KRNSMTPN YQ M+ D+MGRM YEPNKDP+G MRK PGS +PFM+ GQ PN
Sbjct: 1195 SDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGS-DPFMSSGQGPN 1253
Query: 1233 SSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDR-------------------------- 1266
M D Y+++ + N+ MG RQ +PYG YDR
Sbjct: 1254 GGMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSN 1313
Query: 1267 ---------------------RHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQP-NYKRH 1304
RH+ YG Q+ QG PSG P + Q +Y QQ NYKR
Sbjct: 1314 PDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPSGSP-FPSQQTTMYQQQQQNYKRP 1372
Query: 1305 MDGMYGPPAKRHEGDMYNMQYS---------------------------SQQQEMYNQYG 1337
MDG YGPPAKRHEG+MY++ YS S QQ++YNQYG
Sbjct: 1373 MDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYG 1432
Query: 1338 GSY-----SGPDRRPI---QGQYPYPYSRERMQGP-GQIQTHGIPPQMMGGPLQSSSSEG 1388
+Y + +RRP Q Q+P+ + R+R+ P G +PPQMMGGP+Q+S+
Sbjct: 1433 NAYPATATAATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVA 1492
Query: 1389 PQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQR 1448
Q MW RNDM Y Y NRQ G Q P Y G+NRTD+M+ DQR NHE WPSH +++
Sbjct: 1493 QQGTMWQGRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGSWPSHGTRQ 1552
Query: 1449 QPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPS-M 1507
PY SA + P+TRPP +YQ PPS+ NHI + SPA R +ENR SPSKSPFL S M
Sbjct: 1553 PPY-GPSAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGM 1611
Query: 1508 KMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWR 1567
KMQK P VP S + P QPP IRR+ITFPPGSVEA+QPVLKQRR++T KDI TPEAWR
Sbjct: 1612 KMQKAGPPVPASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWR 1671
Query: 1568 VMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGIL 1627
VMMSLKSGLLAESTWALDTINILLYDD+++ TFNLSQL G LELLVEYFR+CLI+IFGIL
Sbjct: 1672 VMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGIL 1731
Query: 1628 MEYEVGDPSQKALDHNAARKDDSQSLADDSGKEEEDAECIDDDEEDEEDEEEDSEKTESD 1687
EYEVGDP Q+ L S + G+EEE E + E+EE+EE E+D
Sbjct: 1732 KEYEVGDPGQRTLLDPGRFSKVSSPAPMEGGEEEE--ELLGPKLEEEEEEEV----VEND 1785
Query: 1688 EKSSIALTAPDAAADPKEKPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLH 1747
E+ IA + D A + K SKFDKLP+KIV+KN+ FVVD SDKLGRVQEF+SGLLH
Sbjct: 1786 EE--IAFSGKDKPASENSEEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLH 1843
Query: 1748 WQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKK--EQEGKGDSEEQQ------- 1798
W++GGGDTTEHIQTHFESK E+ P R P P A RK EG + +Q+
Sbjct: 1844 WRIGGGDTTEHIQTHFESKTELLPSR-PHAPCPPAPRKHVTTAEGTPGTTDQEGPPPDGP 1902
Query: 1799 -EKSIIATIDDVLSARPGALPEDANPGPQT--ESSKFPFGIQQAKSHRNIKLLEDEPRSR 1855
EK I AT+DD+LS R L ED + ESSKFPFGI A+SHRNIK+LEDEP S+
Sbjct: 1903 PEKRITATMDDMLSTRSSTLTEDGAKSSEAIKESSKFPFGISPAQSHRNIKILEDEPHSK 1962
Query: 1856 DETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHP 1915
DETPLCT+ WQDSLAKRC+CVSN +RSLSFVPGND EMSKHPGL+LILGKLILLHH+HP
Sbjct: 1963 DETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHP 2022
Query: 1916 ERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICL 1975
ERK+AP TYEKEE++D+GV+C+K EWWWDCLE+LR+NTLVTLANISGQLDLS Y ESICL
Sbjct: 2023 ERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICL 2082
Query: 1976 PILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFS 2035
P+LDGLLHW VCPSAEAQDPF T+GPN+VLSPQRLVLETL KLSIQDNNVDLILATPPFS
Sbjct: 2083 PVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFS 2142
Query: 2036 RQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDG 2095
R EK Y+T+VR++ DRKNPVCREM++ LL+NLAQGD+LAARAIAVQKGSIGNL+ FLED
Sbjct: 2143 RLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDS 2202
Query: 2096 VTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDIS 2155
+ Q+QQSQ +L+HMQ PP EP SVDMM RAA+ALLA+A+VDEN SEF L+E RLLDIS
Sbjct: 2203 LAATQFQQSQASLLHMQNPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDIS 2262
Query: 2156 ISAVLNSLVASVICDVLFQIGQ 2177
+S ++NSLV+ VICDVLF IGQ
Sbjct: 2263 VSPLMNSLVSQVICDVLFLIGQ 2284
Score = 52.0 bits (123), Expect = 6e-06
Identities = 230/1051 (21%), Positives = 313/1051 (29%), Gaps = 216/1051 (20%)
Query: 16 EAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHP 75
+ P+ PPHQQ A + QQ Q Q Q QQQQ Q P
Sbjct: 520 QQPSQPPHQQSP-----------APYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQP 568
Query: 76 ISNNNSLGGAGGGAPQPGPDMEQ---------PQHGGAKDSAAGGQADPPGPPLLSKPGD 126
+ S A PQP Q P + G QA SK G
Sbjct: 569 APSTLSQQAA---YPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQ 625
Query: 127 ED-----DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG-----GGGGPAAVPEFNNYY 176
ED + P G + +G G P V+ G G A F+ +
Sbjct: 626 EDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHT 685
Query: 177 GSAAPASGGPG----GRAGPCFDQHGGQQSPGM--GMMHSASAAAAGAPGSMDPLQN--- 227
P GP G G SP G + + M P N
Sbjct: 686 SPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSS 745
Query: 228 --SHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGG--------------GSGGGGGGGGA 271
GY P YS P G GG GS G GG
Sbjct: 746 IAQDRGYMQRN-PQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYG 804
Query: 272 GAGG----AGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG------YGVL----------- 310
GG A+ A +A AGG G GG G YG L
Sbjct: 805 PQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPPGRMSHASMG 864
Query: 311 ---------SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTL 361
+ P Q G GM PGG + A A A + QN+ P P +
Sbjct: 865 NRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAAN----SIQNRPP--GYPNM 918
Query: 362 NQLLTSPSPMMRSYGGSYPEY----SSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGL 417
NQ MM G+ P Y +S + P P S + G A+ M
Sbjct: 919 NQ-----GGMM----GTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMAASPEM-- 967
Query: 418 GKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNP 477
MG +PA + + GTP + S K +LY +G P
Sbjct: 968 ---MGLGDVKLTPATKMNNK------ADGTPKTESKSKKSSSSTTTNEKITKLYELGGEP 1018
Query: 478 HSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQ 537
+ G P GR P + + ++ + G Q
Sbjct: 1019 ERKMWVDRYLAFTEEKAMGMTNLP--AVGRKPLDLYRLYVSVKE---------IGGLTQV 1067
Query: 538 GQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQ--------------PQQDMSQEGYGTRSQ 583
+ + + ++ + S +Q Q P D+ +SQ
Sbjct: 1068 NKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQ 1127
Query: 584 PPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSN 643
P + P PS P SGS+ P ++T S S + GD
Sbjct: 1128 PKIQP---------------PS--PAGSGSMQG-PQTPQST-------SSSMAEGGDLKP 1162
Query: 644 PAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSE 703
P +P ++PH S IP P G ++S S I A GS Q S +
Sbjct: 1163 P-----TPASTPH-SQIPPLP---------GMSRSNSVGIQDAFNDGSDSTFQKRNSMTP 1207
Query: 704 SSSH-PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQ 762
+ + P+++ S M M P YG + P P S G + G+
Sbjct: 1208 NPGYQPSMNTSDM------MGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGD-PY 1260
Query: 763 SNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQP-CG 821
S ++G G GP+ +Y Y V + G GP +S PS P G
Sbjct: 1261 SRAAGP-GLGNVAMGPRQHYPYGGPYDRV--RTEPGIGPEGNMSTGAPQPNLMPSNPDSG 1317
Query: 822 AVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQA 881
R P Q + S QG P G P P+ + Q
Sbjct: 1318 MYSPSRYPPQQQQQQ-----QQRHDSYGNQFSTQGTPS-GSPFPS------QQTTMYQQQ 1365
Query: 882 AANSAQSRQGSF--PGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAAS 939
N + G++ P G M S PYS Q PP PA +A
Sbjct: 1366 QQNYKRPMDGTYGPPAKRHEGEM-YSVPYS---TGQGQPQQQQLPPAQPQPASQQQAAQP 1421
Query: 940 VGLADMMSPGESKLPLPLKA--DGKEEGTPQ 968
D+ + + P A + + G PQ
Sbjct: 1422 SPQQDVYNQYGNAYPATATAATERRPAGGPQ 1452
Score = 50.1 bits (118), Expect = 2e-05
Identities = 219/1053 (20%), Positives = 324/1053 (30%), Gaps = 183/1053 (17%)
Query: 21 PPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQ-----------QQQQQQQQQQQQ 69
PP+ Q + ++ H QQQ QQ QQQ Q Q Q
Sbjct: 452 PPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQL 511
Query: 70 QQQQHPISNNNSL-GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDED 128
Q Q P S S AP P QH ++ + QA P + +
Sbjct: 512 QSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSP----YQQQQPQQ 567
Query: 129 DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGG 188
AP + + A Y P +QQ P + +GS A +
Sbjct: 568 PAPSTLSQQAA--YPQP-----QSQQSQQTAYSQQRFPPPQELSQDSFGSQASS------ 614
Query: 189 RAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGA 248
A GGQ+ + + S ++ GS+D L EG + PG S G
Sbjct: 615 -APSMTSSKGGQEDMNLS-LQSRPSSLPDLSGSIDDLPMGTEGALS------PGVSTSGI 666
Query: 249 GGGGGGGGGGGGGSGGGGGGGG-AGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGY 307
G G G V + A+ A + +G G+
Sbjct: 667 SSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQ--- 723
Query: 308 GVLSSPRQQGG--GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
PR G +M P S+++++ G QR Q P ++P L
Sbjct: 724 ---MPPRPPSGQSDSIMHP------SMNQSSIAQDRGYMQR---NPQMPQYSSPQPGSAL 771
Query: 366 TSPSP---------------MMRSYGGSYPEYSSPSAPPPPPSQ---PQSQAAAAGAAAG 407
+ P M SYG +Y P P+ P + +AG A G
Sbjct: 772 SPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGG 831
Query: 408 GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGR---SQGSPMDPM- 463
MG G M Q + SH +M GP M GS M P
Sbjct: 832 ----INPMGAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPP 887
Query: 464 --VMKRPQLYGMGSNPHSQPQQSSP--YP----GGSYGPPGPQRYPIGIQGRTPGAMAGM 515
+ ++ Q + + + Q+ P YP GG G P G+ +MAGM
Sbjct: 888 GGMNRKTQETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPP-------YGQGINSMAGM 940
Query: 516 QYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQ 575
PQ P Y G G + P+ + + P M+
Sbjct: 941 INPQ---GPPYSMGGTMANNSAGM----AASPE----------MMGLGDVKLTPATKMNN 983
Query: 576 EGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGST 635
+ GT P K + E+ + L +L G + + A G T
Sbjct: 984 KADGT----PKTESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYLAFTEEKAMGMT 1039
Query: 636 SSQGDQSNPA---QSPFSPHASPHLSSIPGGPSPSPVGS--PVGSNQSRSGPISPASIP- 689
+ P + S L+ + + + VG++ S + + I
Sbjct: 1040 NLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQC 1099
Query: 690 ----------GSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQT 739
G PP + S P + Q P P G M G Q PQ +
Sbjct: 1100 LYAFECKIERGEDPPPDIFAAADSKKSQPKI-QPPSPAGSGSMQGPQ-TPQSTSSSMAEG 1157
Query: 740 G------PSMSPH----PSPGGQMHAGI-----------SSFQQSNS---SGTYGPQMSQ 775
G P+ +PH P PG + S+FQ+ NS + Y P M+
Sbjct: 1158 GDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNT 1217
Query: 776 YGPQGNYSRPP---AYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAG 832
G S P Y + A S P G N M G S+ G LG +
Sbjct: 1218 SDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGM-GDPYSRAAGP-GLGNVAMGP 1275
Query: 833 MQNRPFPGNMSSMTPSSPGMSQQGGPGMGPP----MPTVNRKAQEAAAAVMQAAANSAQS 888
Q+ P+ G + + PG+ +G G P MP+ + + Q
Sbjct: 1276 RQHYPYGGPYDRVR-TEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQ 1334
Query: 889 RQGSFPGMNQSGLMASSSPY---------SQPMNNSSSLMNTQAPPYSMAPAMVNSSAAS 939
R S+ + S SP+ Q N + T PP + S S
Sbjct: 1335 RHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYS 1394
Query: 940 VGLADMMSPGESKLP--LPLKADGKEEGTPQPE 970
G P + +LP P A ++ P P+
Sbjct: 1395 TGQG---QPQQQQLPPAQPQPASQQQAAQPSPQ 1424
Score = 37.4 bits (85), Expect = 0.16
Identities = 45/179 (25%), Positives = 59/179 (32%), Gaps = 28/179 (15%)
Query: 53 NQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPD--MEQPQHGGAKDSAAG 110
+++ QQQQQQQQ+ N S G G+P P M Q Q K G
Sbjct: 1322 SRYPPQQQQQQQQRHDS------YGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDG 1375
Query: 111 GQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVP 170
GPP G+ P G+ P L QP A P+
Sbjct: 1376 TY----GPPAKRHEGEMYSVPYSTGQ------GQPQQQQLPPAQPQPASQQQAAQPSPQQ 1425
Query: 171 EFNNYYGSAAPA----------SGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAP 219
+ N YG+A PA +GGP + F + PG + G P
Sbjct: 1426 DVYNQYGNAYPATATAATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGP 1484
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 1818 bits (4709), Expect = 0.0
Identities = 1121/2278 (49%), Positives = 1330/2278 (58%), Gaps = 425/2278 (18%)
Query: 107 SAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGP 166
+AA +PP PP P + A + E AGG E A + A GP
Sbjct: 8 AAASSLGNPPPPP----PSELKKAEQQQREEAGG--EAAAAAAAERGEMKAAAGQESEGP 61
Query: 167 AAVPE--FNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
A P A ++GG GG GG A + G PG+
Sbjct: 62 AVGPPQPLGKELQDGAESNGGGGG---------GG-------------AGSGGGPGAEPD 99
Query: 225 LQNSH-EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGA----- 278
L+NS+ P N+ + P GGGGG G G A G G
Sbjct: 100 LKNSNGNAGPRPALNN--NLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRS 157
Query: 279 -GAVAAAAAAA-------------AAAAGGGGGG--GYGG---SSAGYG----------- 308
AVAAAAAA AA GGGGG Y G +S +G
Sbjct: 158 PSAVAAAAAAVFHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYP 217
Query: 309 ------------VLSSPRQQGGGMMMGPGGGGAASL-------SKAAAGSAAGGF--QRF 347
LSSPR GG PG G AA+ S A+A S++ F QRF
Sbjct: 218 NRSAYPPPAPAYALSSPR---GGT---PGSGAAAAAGSKPPPSSSASASSSSSSFAQQRF 271
Query: 348 ----------AGQNQHPSGATPTLNQLLTSPSPMMRSY----GGSYPEYSSPSAPPPPPS 393
AG ATPTLNQLLTSPS R Y GG Y P+
Sbjct: 272 GAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSA-RGYQGYPGGDYSGGPQDGGAGKGPA 330
Query: 394 QPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPA-MSPGTPG--- 449
SQ A AAA AA+G AQQRSH A MSPG+ G
Sbjct: 331 DMASQCWGAAAAAAAAAAASG-------------------GAQQRSHHAPMSPGSSGGGG 371
Query: 450 -PTMGRSQ-GSPMDPMVMKRPQLYGMGSNPHSQ-------PQQSSPYPGGSYGPPGPQRY 500
P Q SPMD M RPQ YG G+NP+SQ PQQ YPG YG PQRY
Sbjct: 372 QPLARTPQPSSPMDQMGKMRPQPYG-GTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRY 430
Query: 501 PI------------------------------GIQGRTPGAMAGMQYPQQQMPPQYGQQG 530
P+ G QG+TP +PQQQ PP Y QQ
Sbjct: 431 PMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPP-YSQQP 489
Query: 531 VS-------GYCQQGQ---------QPYYSQQP-------------------------QP 549
S Y QQ Q QP YSQQP QP
Sbjct: 490 PSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQP 549
Query: 550 PHLPPQAQ-----YLPSQ-------------------------SQQRYQPQQDMSQEGYG 579
P+ PQAQ P Q SQQR+ P Q++SQ+ +G
Sbjct: 550 PYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFG 609
Query: 580 TR--SQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSS 637
++ S P + K ED+NL Q RPSSLPDLSGSIDDLP GTE LS VS SG +SS
Sbjct: 610 SQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSS 669
Query: 638 QGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQP 697
QG+QSNPAQSPFSPH SPHL I G PSPSPVGSP QSRSGP+SPA++PG+QMPP+P
Sbjct: 670 QGEQSNPAQSPFSPHTSPHLPGIRG-PSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRP 728
Query: 698 PGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGI 757
P QS+S HP+++QS + Q+RG+M QRNPQM QY Q G ++SP GGQ+H G+
Sbjct: 729 PSGQSDSIMHPSMNQSSIAQDRGYM---QRNPQMPQYSSPQPGSALSPRQPSGGQIHTGM 785
Query: 758 SSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGIS---ANNQMHGQ 814
S+QQ NS G+YGPQ QYGPQG Y R P Y+ +P+A+Y G GI+ A QMHGQ
Sbjct: 786 GSYQQ-NSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQ 844
Query: 815 GPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEA 874
P G +P GRM A M NRP+ NM++M P Q G GM PP +NRK QE
Sbjct: 845 PGIPPYGTLPPGRMSHASMGNRPYGPNMANMPP-------QVGSGMCPPPGGMNRKTQET 897
Query: 875 AAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVN 934
A A M AANS Q+R +P MNQ G+M + PY Q +N+ + ++N Q PPYSM M N
Sbjct: 898 AVA-MHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMAN 956
Query: 935 SSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGN 994
+SA +MM G+ KL K + K +GTP+ ESKSKKSSSSTTT EKITK+YELG
Sbjct: 957 NSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGG 1016
Query: 995 EPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWREL 1054
EPERK+WVDRYL F EE+ +++LPAVG+KPLDL+RLYV VKEIGGL QVNKNKKWREL
Sbjct: 1017 EPERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWREL 1076
Query: 1055 ATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKK-QPKLQPPSPA 1113
ATNLNVGTSSSAASSLKKQYIQ L+AFECKIERGE+PPP++F+ D+KK QPK+QPPSPA
Sbjct: 1077 ATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPA 1136
Query: 1114 NSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQG-GRSSTISVHDPFSDV 1172
SGS+QGPQTPQST S+SMAE GDLKPPTPASTPH Q+ P+ G RS+++ + D F+D
Sbjct: 1137 GSGSMQGPQTPQST-SSSMAE-GGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDG 1194
Query: 1173 SDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPN 1232
SDS+F KRNSMTPN YQ M+ D+MGRM YEPNKDP+G MRK PG S+PFM+ GQ PN
Sbjct: 1195 SDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPG-SDPFMSSGQGPN 1253
Query: 1233 SSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQP 1292
M D Y+++ + N+ MG RQ +PYG YDR + PG G P G G QP
Sbjct: 1254 GGMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDR-----VRTEPGIG-PEGNMSTGAPQP 1307
Query: 1293 GLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQY 1352
L P P+ GMY P Y Q QQQ+ ++ YG +S
Sbjct: 1308 NLMPSNPD-----SGMYSP-------SRYPPQQQQQQQQRHDSYGNQFS----------- 1344
Query: 1353 PYPYSRERMQGPGQIQTHGIPPQMMGGPLQS-SSSEGPQQNMWAARNDMPYPYQNRQGPG 1411
T G P G P S ++ QQ ++ +P P +NR P
Sbjct: 1345 ----------------TQGTP---SGSPFPSQQTTMYQQQQQVSSPAPLPRPMENRTSP- 1384
Query: 1412 GPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQT 1471
+ P++ S MQ PP P+
Sbjct: 1385 -----------------------------------SKSPFLHSGMKMQK-AGPPVPA--- 1405
Query: 1472 PPSLPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPI 1531
+HI+ AP V P + +T PP
Sbjct: 1406 -----SHIAPAP----------------------------VQPPMIRRDITFPP------ 1426
Query: 1532 RREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILL 1591
GSVEA+QPVLKQRR++T KDI TPEAWRVMMSLKSGLLAESTWALDTINILL
Sbjct: 1427 --------GSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILL 1478
Query: 1592 YDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNAARKDDSQ 1651
YDD+++ TFNLSQL G LELLVEYFR+CLI+IFGIL EYEVGDP Q+ L S
Sbjct: 1479 YDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPGRFSKVSS 1538
Query: 1652 SLADDSGKEEEDAECIDDDEEDEEDEEEDSEKTESDEKSSIALTAPDAAADPKEKPKQAS 1711
+ G+EEE E + E+EE+E E E+DE+ IA + D A + K S
Sbjct: 1539 PAPMEGGEEEE--ELLGPKLEEEEEE----EVVENDEE--IAFSGKDKPASENSEEKLIS 1590
Query: 1712 KFDKLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPP 1771
KFDKLP+KIV+KN+ FVVD SDKLGRVQEF+SGLLHW++GGGDTTEHIQTHFESK E+ P
Sbjct: 1591 KFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELLP 1650
Query: 1772 RRRPPPPLSSAGRK--KEQEGKGDSEEQQ--------EKSIIATIDDVLSARPGALPEDA 1821
RP P A RK EG + +Q+ EK I AT+DD+LS R L ED
Sbjct: 1651 -SRPHAPCPPAPRKHVTTAEGTPGTTDQEGPPPDGPPEKRITATMDDMLSTRSSTLTEDG 1709
Query: 1822 NPGPQT--ESSKFPFGIQQAKSHRNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSN 1879
+ ESSKFPFGI A+SHRNIK+LEDEP S+DETPLCT+ WQDSLAKRC+CVSN
Sbjct: 1710 AKSSEAIKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSN 1769
Query: 1880 IVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACSKD 1939
+RSLSFVPGND EMSKHPGL+LILGKLILLHH+HPERK+AP TYEKEE++D+GV+C+K
Sbjct: 1770 TIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKV 1829
Query: 1940 EWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTV 1999
EWWWDCLE+LR+NTLVTLANISGQLDLS Y ESICLP+LDGLLHW VCPSAEAQDPF T+
Sbjct: 1830 EWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTL 1889
Query: 2000 GPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREM 2059
GPN+VLSPQRLVLETL KLSIQDNNVDLILATPPFSR EK Y+T+VR++ DRKNPVCREM
Sbjct: 1890 GPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREM 1949
Query: 2060 SMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPP 2119
++ LL+NLAQGD+LAARAIAVQKGSIGNL+ FLED + Q+QQSQ +L+HMQ PP EP
Sbjct: 1950 AVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEPT 2009
Query: 2120 SVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQ 2177
SVDMM RAA+ALLA+A+VDEN SEF L+E RLLDIS+S ++NSLV+ VICDVLF IGQ
Sbjct: 2010 SVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQ 2067
Score = 53.1 bits (126), Expect = 3e-06
Identities = 224/1015 (22%), Positives = 302/1015 (29%), Gaps = 218/1015 (21%)
Query: 16 EAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHP 75
+ P+ PPHQQ A + QQ Q Q Q QQQQ Q P
Sbjct: 520 QQPSQPPHQQSP-----------APYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQP 568
Query: 76 ISNNNSLGGAGGGAPQPGPDMEQ---------PQHGGAKDSAAGGQADPPGPPLLSKPGD 126
+ S A PQP Q P + G QA SK G
Sbjct: 569 APSTLSQQAA---YPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQ 625
Query: 127 ED-----DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG-----GGGGPAAVPEFNNYY 176
ED + P G + +G G P V+ G G A F+ +
Sbjct: 626 EDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHT 685
Query: 177 GSAAPASGGPG----GRAGPCFDQHGGQQSPGM--GMMHSASAAAAGAPGSMDPLQN--- 227
P GP G G SP G + + M P N
Sbjct: 686 SPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSS 745
Query: 228 --SHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGG--------------GSGGGGGGGGA 271
GY P YS P G GG GS G GG
Sbjct: 746 IAQDRGYMQRN-PQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYG 804
Query: 272 GAGG----AGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG------YGVL----------- 310
GG A+ A +A AGG G GG G YG L
Sbjct: 805 PQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPPGRMSHASMG 864
Query: 311 ---------SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTL 361
+ P Q G GM PGG + A A A + QN+ P P +
Sbjct: 865 NRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHVAAN----SIQNRPP--GYPNM 918
Query: 362 NQLLTSPSPMMRSYGGSYPEY----SSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGL 417
NQ MM G+ P Y +S + P P S + G A+ M
Sbjct: 919 NQ-----GGMM----GTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMAASPEM-- 967
Query: 418 GKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNP 477
MG +PA + + GTP + S K +LY +G P
Sbjct: 968 ---MGLGDVKLTPATKMNNK------ADGTPKTESKSKKSSSSTTTNEKITKLYELGGEP 1018
Query: 478 HSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQ 537
+ G P GR P + + ++ + G Q
Sbjct: 1019 ERKMWVDRYLAFTEEKAMGMTNLP--AVGRKPLDLYRLYVSVKE---------IGGLTQV 1067
Query: 538 GQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQ--------------PQQDMSQEGYGTRSQ 583
+ + + ++ + S +Q Q P D+ +SQ
Sbjct: 1068 NKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQ 1127
Query: 584 PPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSN 643
P + P PS P SGS+ P ++T S S + GD
Sbjct: 1128 PKIQP---------------PS--PAGSGSMQG-PQTPQST-------SSSMAEGGDLKP 1162
Query: 644 PAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSE 703
P +P ++PH S IP P G ++S S I A GS Q S +
Sbjct: 1163 P-----TPASTPH-SQIPPLP---------GMSRSNSVGIQDAFNDGSDSTFQKRNSMTP 1207
Query: 704 SSSH-PALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQ 762
+ + P+++ S M M P YG + P P S G + G+
Sbjct: 1208 NPGYQPSMNTSDM------MGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGD-PY 1260
Query: 763 SNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQP-CG 821
S ++G G GP+ +Y Y V + G GP +S PS P G
Sbjct: 1261 SRAAGP-GLGNVAMGPRQHYPYGGPYDRV--RTEPGIGPEGNMSTGAPQPNLMPSNPDSG 1317
Query: 822 AVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQA 881
R P Q + S QG P G P P+ Q
Sbjct: 1318 MYSPSRYPPQQQQQQ-----QQRHDSYGNQFSTQGTPS-GSPFPS-------------QQ 1358
Query: 882 AANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPY---SMAPAMV 933
Q +Q S P + +SP P +S M PP +APA V
Sbjct: 1359 TTMYQQQQQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAPV 1413
Score = 46.6 bits (109), Expect = 3e-04
Identities = 197/935 (21%), Positives = 290/935 (31%), Gaps = 165/935 (17%)
Query: 21 PPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQ-----------QQQQQQQQQQQQ 69
PP+ Q + ++ H QQQ QQ QQQ Q Q Q
Sbjct: 452 PPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQL 511
Query: 70 QQQQHPISNNNSL-GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDED 128
Q Q P S S AP P QH ++ + QA P + +
Sbjct: 512 QSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSP----YQQQQPQQ 567
Query: 129 DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGG 188
AP + + A Y P +QQ P + +GS A +
Sbjct: 568 PAPSTLSQQAA--YPQP-----QSQQSQQTAYSQQRFPPPQELSQDSFGSQASS------ 614
Query: 189 RAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGA 248
A GGQ+ + + S ++ GS+D L EG + PG S G
Sbjct: 615 -APSMTSSKGGQEDMNLS-LQSRPSSLPDLSGSIDDLPMGTEGALS------PGVSTSGI 666
Query: 249 GGGGGGGGGGGGGSGGGGGGGG-AGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGY 307
G G G V + A+ A + +G G+
Sbjct: 667 SSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQ--- 723
Query: 308 GVLSSPRQQGG--GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
PR G +M P S+++++ G QR Q P ++P L
Sbjct: 724 ---MPPRPPSGQSDSIMHP------SMNQSSIAQDRGYMQR---NPQMPQYSSPQPGSAL 771
Query: 366 TSPSP---------------MMRSYGGSYPEYSSPSAPPPPPSQ---PQSQAAAAGAAAG 407
+ P M SYG +Y P P+ P + +AG A G
Sbjct: 772 SPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGG 831
Query: 408 GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGR---SQGSPMDPM- 463
MG G M Q + SH +M GP M GS M P
Sbjct: 832 ----INPMGAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPP 887
Query: 464 --VMKRPQLYGMGSNPHSQPQQSSP--YP----GGSYGPPGPQRYPIGIQGRTPGAMAGM 515
+ ++ Q + + + Q+ P YP GG G P G+ +MAGM
Sbjct: 888 GGMNRKTQETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPP-------YGQGINSMAGM 940
Query: 516 QYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQ 575
PQ P Y G G + P+ + + P M+
Sbjct: 941 INPQ---GPPYSMGGTMANNSAGM----AASPE----------MMGLGDVKLTPATKMNN 983
Query: 576 EGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGST 635
+ GT P K + E+ + L +L G + + A G T
Sbjct: 984 KADGT----PKTESKSKKSSSSTTTNEKITKLYELGGEPERKMWVDRYLAFTEEKAMGMT 1039
Query: 636 SSQGDQSNPA---QSPFSPHASPHLSSIPGGPSPSPVGS--PVGSNQSRSGPISPASIP- 689
+ P + S L+ + + + VG++ S + + I
Sbjct: 1040 NLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQC 1099
Query: 690 ----------GSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQT 739
G PP + S P + Q P P G M G Q PQ +
Sbjct: 1100 LYAFECKIERGEDPPPDIFAAADSKKSQPKI-QPPSPAGSGSMQGPQ-TPQSTSSSMAEG 1157
Query: 740 G------PSMSPH----PSPGGQMHAGI-----------SSFQQSNS---SGTYGPQMSQ 775
G P+ +PH P PG + S+FQ+ NS + Y P M+
Sbjct: 1158 GDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNT 1217
Query: 776 YGPQGNYSRPP---AYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAG 832
G S P Y + A S P G N M G S+ G LG +
Sbjct: 1218 SDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGM-GDPYSRAAGP-GLGNVAMGP 1275
Query: 833 MQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTV 867
Q+ P+ G + + PG+ +G G P P +
Sbjct: 1276 RQHYPYGGPYDRVR-TEPGIGPEGNMSTGAPQPNL 1309
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 118 bits (295), Expect = 7e-26
Identities = 234/1002 (23%), Positives = 316/1002 (31%), Gaps = 154/1002 (15%)
Query: 59 QQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADP--- 115
Q Q +Q + Q+ P + +G G PQ GP EQ G D G P
Sbjct: 24 QGQDVRQPGPKGQKGEPGDIKDIVGPKGPPGPQ-GPAGEQGPRGDRGDKGEKGAPGPRGR 82
Query: 116 ---------PGPPLLSKPGDEDDAPPKMG-----EPAGGRYEHPGLGALGTQQPPVAV-- 159
PGPP PG PP +G + AGG E G LG Q P+
Sbjct: 83 DGEPGTPGNPGPP--GPPGPP--GPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMG 138
Query: 160 PGGGGGPAAVPEFNNYYGSAA----PASGGPGGRAGPCF-------DQHGGQQSPGMGMM 208
P G GPA P + G+ P GP G GP D G+
Sbjct: 139 PRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERG 198
Query: 209 HSASAAAAGAPGSMD-PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG-------- 259
A G PG+ P H GYP PG G G G G
Sbjct: 199 PPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEA-GAPGVKGESGSPGENGSPGPMGPR 257
Query: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV---------- 309
G G G G AGA GA A G GG G+ G+ G
Sbjct: 258 GLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPE 317
Query: 310 -LSSPRQQGG--------GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN--QHPSGAT 358
PR + G G PG G +A G F G P GAT
Sbjct: 318 GAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGAT 377
Query: 359 PTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAG--AAAGGQQAAAGMG 416
L + P + + G P P+ PQ AG G + G+G
Sbjct: 378 GPLGPKGQTGEPGIAGFKGEQGPKGEPG-----PAGPQGAPGPAGEEGKRGARGEPGGVG 432
Query: 417 LGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPT-MGRSQGSPMDPMVMKRPQLYG--- 472
G + A + + + P +PG GP+ + +G+ DP P L G
Sbjct: 433 PIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARG 492
Query: 473 -MGSNPHSQPQ-----QSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQ--QQMPP 524
G + PQ +P G GPPGPQ G +G+ PG M G P+ P
Sbjct: 493 LTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQ----GARGQ-PGVM-GFPGPKGANGEPG 546
Query: 525 QYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQP 584
+ G++G+ G G + + + P P+ + +G P
Sbjct: 547 KAGEKGLPG--APGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGP 604
Query: 585 PLAPGKPNHEDL-------NLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSS 637
P GKP + + L+ P GS P + + T
Sbjct: 605 PGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGS----PGAQGLQGPRGLPGTPGTDG 660
Query: 638 QGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVG-----------------SNQSRS 680
S PA P P L +PG + + P G + +
Sbjct: 661 PKGASGPAGPP-GAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLT 719
Query: 681 GPISPASIPGSQ------MPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQY 734
GPI P G+ PP P GS + ++ P GF + Q
Sbjct: 720 GPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAK 779
Query: 735 GPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSA 794
G Q +PG Q +G Q +G GP+ ++ G QG PP +G P A
Sbjct: 780 GEQGEAGQKGDAGAPGPQGPSGAPGPQ--GPTGVTGPKGAR-GAQG----PPGATGFPGA 832
Query: 795 SYSGPGPGMGISANNQMHGQGPSQPCGA-VPLGRMPSAGMQNRPFPGNMSSMTPSSPGMS 853
+ PG +N GP P G P G +G R G P+ P
Sbjct: 833 AGRVGPPG----SNGNPGPPGPPGPSGKDGPKGARGDSGPPGR--AGEPGLQGPAGP-PG 885
Query: 854 QQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQP-M 912
++G PG P + A Q + FPG+ P +P
Sbjct: 886 EKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGL--------PGPSGEPGK 937
Query: 913 NNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLP 954
+ + PP + P + A G SPG P
Sbjct: 938 QGAPGASGDRGPPGPVGPPGLTGPAGEPGREG--SPGADGPP 977
Score = 112 bits (281), Expect = 3e-24
Identities = 180/642 (28%), Positives = 213/642 (33%), Gaps = 94/642 (14%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS-KPGDEDDAPPKMGEPA--GG 140
GA G GP E+ + G S G PPGPP KPGD+ P + G P G
Sbjct: 570 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQG-VPGEAGAPGLVGP 628
Query: 141 RYEHPGLGALGTQQPPVAVPGGGG--GPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHG 198
R E G G+ PG G GP +P P + GP G +GP G
Sbjct: 629 RGERGFPGERGS-------PGAQGLQGPRGLP--------GTPGTDGPKGASGPA-GPPG 672
Query: 199 GQQSPGMGMMHSASAAA--AGAPGSM-DPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGG 255
Q PG+ M AA AG G D + EG P G + P G G
Sbjct: 673 AQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGR--GLTGPIGPPGPAGA 730
Query: 256 GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
G G G G G AGA GA A AG G G G+ G
Sbjct: 731 NGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGD 790
Query: 316 QGGGMMMGPGGG-GAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRS 374
G GP G G + A G Q G P A
Sbjct: 791 AGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAA----------------- 833
Query: 375 YGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAA-GGQQAAAGMGLGKDMGAQYAAASPAWA 433
G P S+ + PP P P + GA G AG + G Q A P
Sbjct: 834 -GRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAG-----EPGLQGPAGPPGEK 887
Query: 434 AAQQRSHPAMSPGTPGPTMGRSQ----GSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG 489
P+ + G PGP Q G P P L G P +Q +P
Sbjct: 888 GEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPG---KQGAPGAS 944
Query: 490 GSYGPPGPQRYPIGIQGRTPGAMAGMQ-YPQQQMPP-QYGQQGVSGYCQQGQQPYYSQQP 547
G GPPGP P G+ G P G + P PP + G GV G + P
Sbjct: 945 GDRGPPGPVGPP-GLTG--PAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAP 1001
Query: 548 QPPHLPPQAQYLPSQSQQ-RYQPQQDMSQEG-YGTRS-QPPLAP-------GKPNHEDLN 597
PP P A Q + Q M G G R Q P P G+P L
Sbjct: 1002 GPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLK 1061
Query: 598 LIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHL 657
+ L L G P G S ASG G + P P P
Sbjct: 1062 --GHRGFTGLQGLPG-----PPGP----SGDQGASGPAGPSGPRGPPG--PVGPSGKDGA 1108
Query: 658 SSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPG 699
+ IPG P+G P + RSG PA PG+ PP PPG
Sbjct: 1109 NGIPG-----PIGPP--GPRGRSGETGPAGPPGNPGPPGPPG 1143
Score = 108 bits (271), Expect = 4e-23
Identities = 227/904 (25%), Positives = 282/904 (31%), Gaps = 194/904 (21%)
Query: 83 GGAGGGAPQ--PGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPA-- 138
G G PQ GP + Q G + G+ P G P P AP GE
Sbjct: 366 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEP---GPAGPQGAPGPAGEEGKR 422
Query: 139 GGRYEHPGLGALGTQQPPVAVPGGGGGPA--AVPEFNNYYG-SAAPASGGPGGRAGPCFD 195
G R E G+G P+ PG G P P + G AP GP G AGP
Sbjct: 423 GARGEPGGVG-------PIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPK-G 474
Query: 196 QHGGQQSPGMGMMHSASAAAAGAPGSMDPL----------QNSHEGYPNSQ-CNHYPGYS 244
+G PG + A G PG P ++ G P Q PG
Sbjct: 475 ANGDPGRPGEPGLPGARGLT-GRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVM 533
Query: 245 RPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSS 304
G G G G G G G G G AA A AG G G G S
Sbjct: 534 GFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPS 593
Query: 305 AGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQL 364
G+ P G G PG G + A G + F G+ P Q
Sbjct: 594 GFQGLPGPPGPPGEGGK--PGDQGVPGEAGAPGLVGPRGERGFPGERGSPGA------QG 645
Query: 365 LTSPSPMMRSYGGSYPEYSS-PSAPP----PPPSQPQSQAAAAGAAAG-----------G 408
L P + + G P+ +S P+ PP PP Q A AG G
Sbjct: 646 LQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKG 705
Query: 409 QQAAAGMGLGKDMGAQYAAASPAWAAAQQRS----HPAMSPGTPGPTMGRSQGSPMDPMV 464
+ A G G+ + PA A ++ PA S G G R + P P
Sbjct: 706 PEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAG 765
Query: 465 MKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQ----Q 520
P G P ++ +Q G G PGPQ P G G P G+ P+
Sbjct: 766 FAGPP--GADGQPGAKGEQGEAGQKGDAGAPGPQG-PSGAPG--PQGPTGVTGPKGARGA 820
Query: 521 QMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLP-PQAQYLPSQSQQRYQPQQDMSQEGYG 579
Q PP G G G + P + P PP P P + P ++ P + G
Sbjct: 821 QGPP--GATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQ 878
Query: 580 TRSQPPLAPGKPNHED-------------------LNLIQQERPSSLPDLSGSIDDLPTG 620
+ PP G+P + + L Q P L G P+G
Sbjct: 879 GPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPG-----PSG 933
Query: 621 TEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPG--GP-------------- 664
E A ASG G P + P P PG GP
Sbjct: 934 -EPGKQGAPGASGDRGPPGPVGPPGLT--GPAGEPGREGSPGADGPPGRDGAAGVKGDRG 990
Query: 665 ---------SPSPVGSPVGSN-------------QSRSGPISPASIPGSQMPPQPPGSQS 702
+P P GSP + Q GP PA G Q P P G +
Sbjct: 991 ETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKG 1050
Query: 703 ESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQ 762
E+ P ERG GP P P G A
Sbjct: 1051 EAGE---------PGERGLKGHRGFTGLQGLPGP----------PGPSGDQGA------- 1084
Query: 763 SNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHG-QGPSQPCG 821
SG GP GP+G PGP +G S + +G GP P G
Sbjct: 1085 ---SGPAGPS----GPRG-----------------PPGP-VGPSGKDGANGIPGPIGPPG 1119
Query: 822 AVPLGRMPSAGMQNRP-FPGNMSSMTPSSPGMSQQGGPGMGP----PMPTVNRKAQEAAA 876
P GR G P PG P PG+ G+GP P P +A +AA
Sbjct: 1120 --PRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGPDPLQYMRADQAAG 1177
Query: 877 AVMQ 880
+ Q
Sbjct: 1178 GLRQ 1181
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 116 bits (291), Expect = 2e-25
Identities = 207/809 (25%), Positives = 256/809 (31%), Gaps = 120/809 (14%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGP---PLLSKPGDEDDAPPKMGEPAGG 140
G G PG G A + A G P GP P P E AP G P G
Sbjct: 462 GEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAG-PRGA 520
Query: 141 RYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQ 200
E PG + +PG GGP + + P S G GR GP G +
Sbjct: 521 AGE-PGRDGVPGGPGMRGMPGSPGGPGSDGK------PGPPGSQGESGRPGPP-GPSGPR 572
Query: 201 QSPG-MGMM----------HSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAG 249
PG MG + G PG P + E P PG + PG
Sbjct: 573 GQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGP----PGPTGPGGD 628
Query: 250 GGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV 309
G G G G G G GG G G A A A GG G G G G+
Sbjct: 629 KGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGL 688
Query: 310 LSSPRQQGGGMMMGP-GGGGAASLSKAAAGSAAGGFQRFAGQ------------------ 350
+P +GG GP GG GAA + G Q G+
Sbjct: 689 AGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGG 748
Query: 351 --------NQHPSGATPTLNQLLTSPSPMMRSYGGS--YPEYSSPSAPPPPPSQPQSQAA 400
P G T + + P + GG+ P + P P +
Sbjct: 749 PGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGP 808
Query: 401 AAGAAAGGQQA-AAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSP 459
A A GQ G G G + P A S PA PG G + +GSP
Sbjct: 809 AGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQG--VKGERGSP 866
Query: 460 MDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQ 519
P P G+ P S P P GS G GP PG P
Sbjct: 867 GGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGP-----------PGPAGNTGAP- 914
Query: 520 QQMPPQYGQQGVSGYCQQGQQPYYSQQP---QPPHLPPQAQYLPSQSQQRYQPQQDMSQE 576
G GVSG QP P PP P + M
Sbjct: 915 -------GSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGM--P 965
Query: 577 GYGTRSQPPLAPGKPNHEDLNLIQQER----PSSLPDLSGSIDDLPTGTEATLSSAVSAS 632
G P G+ N + ER P LP L+G+ +
Sbjct: 966 GPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRD 1025
Query: 633 GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPS-PSPVGSPVGSNQSR--SGPISPASIP 689
GS +GD+ + SP PG P P PVG P G + R SGP PA P
Sbjct: 1026 GSPGGKGDRGE--------NGSPGAPGAPGHPGPPGPVG-PAGKSGDRGESGPAGPAGAP 1076
Query: 690 ---GSQMPPQPPGSQSESSSHPALSQSPMPQERGFMA--GTQRNPQMAQYGPQ-QTGPSM 743
GS+ P P G + + + + RGF G +P GP Q G
Sbjct: 1077 GPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSP-----GPAGQQGAIG 1131
Query: 744 SPHPSPGGQMHAGISSFQ-QSNSSGTYGPQMSQYGPQGNYSR-----PPAYSGVPS--AS 795
SP P+ G + G S + +SG GP + GP+GN P + G P
Sbjct: 1132 SPGPA-GPRGPVGPSGPPGKDGTSGHPGP-IGPPGPRGNRGERGSEGSPGHPGQPGPPGP 1189
Query: 796 YSGPGPGMGISANNQMHGQGPSQPCGAVP 824
PGP G + G G + G P
Sbjct: 1190 PGAPGPCCGGVGAAAIAGIGGEKAGGFAP 1218
Score = 110 bits (276), Expect = 1e-23
Identities = 241/989 (24%), Positives = 305/989 (30%), Gaps = 168/989 (16%)
Query: 65 QQQQQQQQQHPISNNNSLGGAGG---GAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLL 121
Q Q + + + ++GG G A PGP G + G PPG P
Sbjct: 149 QNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQ 208
Query: 122 SKPGDEDDAPPKMGE--PAG--GRYEHPGL-GALGTQQPPVAVPGGGGGPAAVPEFNNYY 176
+ P P +G PAG G PG G G PP G GPA +P F
Sbjct: 209 AGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPP-----GIKGPAGIPGFPGMK 263
Query: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ 236
G G GR G + G +PG+ + GAPG M P G P +
Sbjct: 264 GHR-----GFDGRNG----EKGETGAPGL-KGENGLPGENGAPGPMGP-----RGAPGER 308
Query: 237 CNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGG 296
RPG G G G G G G G A + A G G
Sbjct: 309 -------GRPGLPGAAGA-------RGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVG 354
Query: 297 GGGYGGSSAGYGVLSSPRQQGGGMMMGPGG--------GGAASLSKAAAGSAAG-----G 343
G GS+ G P QG GP G GG + A A G G
Sbjct: 355 PAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARG 414
Query: 344 FQRFAGQNQHP----SGATPTLNQLLTSPSPM-------MRSYGGSYPEYSSPSAPPPPP 392
AG N P P N P P + G+ E +P P
Sbjct: 415 PPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPG 474
Query: 393 SQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTP-GPT 451
+ AA A G + A G+ + G +P A + + G P GP
Sbjct: 475 ANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPG 534
Query: 452 MGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGP---PGPQRYP-----IG 503
M GSP P +P P SQ + P P G GP PG +P G
Sbjct: 535 MRGMPGSPGGPGSDGKP------GPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDG 588
Query: 504 IQGRTPGAMAGMQYPQQQMPP----QYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYL 559
G+ G G P Q PP + G QG G G + P P L Q L
Sbjct: 589 APGKN-GERGGPGGPGPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGL----QGL 643
Query: 560 PSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHE-DLNLIQQERPSSL---PDLSGSID 615
P P + + G APG P + D + P L P L G
Sbjct: 644 PGTG----GPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAG 699
Query: 616 DLPTGTEATLSSA-----------------------VSASGSTSSQGDQSNPAQSPFSPH 652
P G E +A + + G +G+ P
Sbjct: 700 --PPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGK 757
Query: 653 ASPHLSSIPGGPSPSPVGSP----VGSNQSRSGPISPASIPGSQ---MPPQP---PGSQS 702
P + P GP P P G P G G P PG + PP P PG+
Sbjct: 758 DGPRGPTGPIGP-PGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPG 816
Query: 703 ESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHP--------SPGGQMH 754
++ + P E+G + P P +GP+ P P SPGG
Sbjct: 817 QNGEPGGKGERGAPGEKG-----EGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGA 871
Query: 755 AGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQ 814
AG + G GP G GN PP SG P PGP A
Sbjct: 872 AGF-----PGARGLPGPP----GSNGN-PGPPGPSGSPGKD-GPPGPAGNTGAPGSPGVS 920
Query: 815 GPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEA 874
GP G G S G Q P + + G PGM P P + Q
Sbjct: 921 GPKGDAGQP--GEKGSPGAQGPPGAPGPLGIAGITGARGLAGPPGM--PGPRGSPGPQGV 976
Query: 875 AAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMN-NSSSLMNTQAPPYSMAPAMV 933
+ AN +G GL ++ + N S L P
Sbjct: 977 KGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGE 1036
Query: 934 NSSAASVGLADMMSPGESKLPLPLKADGK 962
N S + G +PG P P+ GK
Sbjct: 1037 NGSPGAPG-----APGHPGPPGPVGPAGK 1060
Score = 84.3 bits (207), Expect = 1e-15
Identities = 132/499 (26%), Positives = 162/499 (32%), Gaps = 77/499 (15%)
Query: 84 GAGGGAPQPGPDMEQ-----PQHGGAKDSAAG-GQADPPGPPLLSKPGDEDDAPPKMGEP 137
G G A QPG E P G + S G+ PPGP PG AP + GEP
Sbjct: 768 GPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPA--GFPG----APGQNGEP 821
Query: 138 AGGRYEHPGLGALGTQQPP-VAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQ 196
GG+ E G G PP VA P GG GPA P G G PGG F
Sbjct: 822 -GGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGER----GSPGGPGAAGFPG 876
Query: 197 HGGQQSPGMGMMHSASAAAAGAPGSMDPLQNS-HEGYPNSQCNHYPGYSRPGAGGGGGGG 255
G P + +G+PG P + + G P S PG S P G G
Sbjct: 877 ARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTGAPGS-----PGVSGPKGDAGQPGE 931
Query: 256 GGGGGGSGGGGGGGGAG-AGGAGAGAVAAAAAAAAAAAGGG-----GGGGYGGSSAGYGV 309
G G G G G G AG GA +A G G G G++ G
Sbjct: 932 KGSPGAQGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGE 991
Query: 310 LSSPRQQGGGMMMG----------PGGGGAASLSKAAAGSA---AGGFQRFAGQNQHPSG 356
P QG + G PG G + G G G HP
Sbjct: 992 RGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGP 1051
Query: 357 ATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQ---PQSQAAAAGAAAGGQQAAA 413
P P+ G S P + P+ P P P Q G++ AA
Sbjct: 1052 PGPV------GPAGKSGDRGESGP--AGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAA 1103
Query: 414 GMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRS-----QGSPMDPMVMKRP 468
G+ + A A QQ + + P P +G S G+ P + P
Sbjct: 1104 GIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPP 1163
Query: 469 QLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQ 528
G N + + SP G GPPGP P G A
Sbjct: 1164 ---GPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGVGAAAIA-------------- 1206
Query: 529 QGVSGYCQQGQQPYYSQQP 547
G+ G G PYY +P
Sbjct: 1207 -GIGGEKAGGFAPYYGDEP 1224
Score = 80.1 bits (196), Expect = 2e-14
Identities = 181/753 (24%), Positives = 228/753 (30%), Gaps = 167/753 (22%)
Query: 160 PGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAP 219
P G GP +P N G P G G GP PG+ + P
Sbjct: 107 PKGDPGPPGIPGRNGDPG--IPGQPGSPGSPGP----------PGI------CESCPTGP 148
Query: 220 GSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAG 279
+ P +S++ GY P G G G G G G G G G
Sbjct: 149 QNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQ 208
Query: 280 AVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGS 339
A + A G G G G S PG G L
Sbjct: 209 AGPSGPPGPPGAIGPSGPAGKDGESG-----------------RPGRPGERGLPGPPGIK 251
Query: 340 AAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPP---PPSQPQ 396
G F G H G + + +P ++ G E +P P P + +
Sbjct: 252 GPAGIPGFPGMKGH-RGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPGERGR 310
Query: 397 SQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGT--------- 447
A A G A G G A P A+ PA SPG+
Sbjct: 311 PGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGE 370
Query: 448 PGPT-MGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG--GSYGPPGPQRYPIGI 504
PGP +QG P P + P G P PG G+ GPPG P G
Sbjct: 371 PGPQGHAGAQGPPGPPGINGSP-----GGKGEMGPAGIPGAPGLMGARGPPG----PAGA 421
Query: 505 QGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQ 564
G PG G P G+ G G +P P +A +P
Sbjct: 422 NG-APGLRGGAGEP--------GKNGAKG------------EPGPRGERGEAG-IPGVPG 459
Query: 565 QRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEAT 624
+ + +D S PG+P L ER P G P G
Sbjct: 460 AKGEDGKDGS-------------PGEPGANGLPGAAGER--GAPGFRG-----PAGPN-- 497
Query: 625 LSSAVSASGSTSSQGDQSNPAQS-PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPI 683
G G++ P + P P +PGGP R P
Sbjct: 498 -----GIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPG------------MRGMPG 540
Query: 684 SPASIPGSQMPPQPPGSQSESS-----------SHPALSQSPMPQ----------ERGFM 722
SP PGS P PPGSQ ES P + P P+ ERG
Sbjct: 541 SPGG-PGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGP 599
Query: 723 AGTQRNPQMAQYGPQQTGPSMSPHPS-PGGQM----HAGISSFQQSNSSGTYGP-----Q 772
G PQ +TGP P P+ PGG G Q GT GP +
Sbjct: 600 GGP--GPQGPPGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQ--GLPGTGGPPGENGK 655
Query: 773 MSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAG 832
+ GP+G+ P A G A G G++ + G GA P G G
Sbjct: 656 PGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRG-------GAGPPGPEGGKG 708
Query: 833 MQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMP 865
P P + TP GM + G G+G P P
Sbjct: 709 AAGPPGPPGAAG-TPGLQGMPGERG-GLGSPGP 739
Score = 77.4 bits (189), Expect = 1e-13
Identities = 110/363 (30%), Positives = 127/363 (34%), Gaps = 43/363 (11%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAG--GQADPPGPPLLSKPGDEDDAPPKMGEP-A 138
L G G PGP P KD G G PG P +S P + P + G P A
Sbjct: 880 LPGPPGSNGNPGPP--GPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGA 937
Query: 139 GGRYEHPG-LGALG-TQQPPVAVPGGGGGPAAVPEFNNYYG-SAAPASGGPGGRAGPCFD 195
G PG LG G T +A P G GP P G S P + G G GP
Sbjct: 938 QGPPGAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGP--- 994
Query: 196 QHGGQQSPGMGMMHSASAAAAGAPGS--MDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGG 253
G Q PG+ + G PGS + S G + N PG PGA G G
Sbjct: 995 -PGPQGLPGLAGT-AGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPG--APGAPGHPG 1050
Query: 254 GGG--GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLS 311
G G G SG G G AG GA A + A G G G G++ G
Sbjct: 1051 PPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRG 1110
Query: 312 SPRQQGGGMMMGPGGGGAASLSKAAAGSAA----GGFQRFAGQNQHPSGATPTLNQLLTS 367
P G GP G A S AG G G + HP P
Sbjct: 1111 FPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGP-------- 1162
Query: 368 PSPM----MRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGA 423
P P R GS P + PP PP P G GG AAA G+G +
Sbjct: 1163 PGPRGNRGERGSEGS-PGHPGQPGPPGPPGAP-------GPCCGGVGAAAIAGIGGEKAG 1214
Query: 424 QYA 426
+A
Sbjct: 1215 GFA 1217
Score = 63.9 bits (154), Expect = 2e-09
Identities = 89/334 (26%), Positives = 115/334 (34%), Gaps = 59/334 (17%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLL-------SKPGDE-----DDAP 131
G G PGP + + G + G+ PPGP L +PG + D P
Sbjct: 963 GMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLP 1022
Query: 132 PKMGEPAG--GRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG-GPGG 188
+ G P G R E+ GA G P P G GPA G A PA GP G
Sbjct: 1023 GRDGSPGGKGDRGENGSPGAPGAPGHPG--PPGPVGPAGKSGDRGESGPAGPAGAPGPAG 1080
Query: 189 RAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGA 248
G G Q P + AAG G H G+P + PGA
Sbjct: 1081 SRGA-----PGPQGPRGDKGETGERGAAGIKG--------HRGFPGN----------PGA 1117
Query: 249 GGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308
G G G G G G AG G + + G G G G+ G
Sbjct: 1118 PGSPGPAGQ----QGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERG 1173
Query: 309 VLSSPRQQGGGMMMGP--------GGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
SP G GP GG GAA+++ G AGGF + G P
Sbjct: 1174 SEGSPGHPGQPGPPGPPGAPGPCCGGVGAAAIA-GIGGEKAGGFAPYYG--DEPMDFKIN 1230
Query: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQ 394
++++TS ++S G SP P++
Sbjct: 1231 TDEIMTS----LKSVNGQIESLISPDGSRKNPAR 1260
Score = 59.7 bits (143), Expect = 3e-08
Identities = 95/400 (23%), Positives = 127/400 (31%), Gaps = 79/400 (19%)
Query: 547 PQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSS 606
PQPP P + P Q P+ D G R+ P PG+P P S
Sbjct: 89 PQPPTAPTR----PPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPG----------SPGS 134
Query: 607 LPDLSGSIDDLPTGTE--------ATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLS 658
P G + PTG + + S V+ G G PA P P P S
Sbjct: 135 -PGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPG----PAGPP-GPPGPPGTS 188
Query: 659 SIPGGP-SPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESS--SHPALSQSP- 714
PG P SP G P ++GP P PG+ P P G ES P P
Sbjct: 189 GHPGSPGSPGYQGPP--GEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPG 246
Query: 715 ------------MPQERGFMAGTQRNPQMAQYG----------PQQTGP--SMSPHPSPG 750
P +G RN + + G P + G M P +PG
Sbjct: 247 PPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAPG 306
Query: 751 GQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSA--SYSGPGPGMGISAN 808
+ G+ + + Q GP G PP +G P + + GP +N
Sbjct: 307 ERGRPGLPGAAGARGNDGARGSDGQPGPPG----PPGTAGFPGSPGAKGEVGPAGSPGSN 362
Query: 809 NQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPG-------MG 861
+G P G AG Q P P ++ M G PG G
Sbjct: 363 GAPGQRGEPGPQG--------HAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARG 414
Query: 862 PPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGL 901
PP P A + N A+ G ++G+
Sbjct: 415 PPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGI 454
Score = 55.5 bits (132), Expect = 6e-07
Identities = 63/223 (28%), Positives = 70/223 (31%), Gaps = 38/223 (17%)
Query: 80 NSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAG 139
N GA G PGP G + D G A P G P P AP G P G
Sbjct: 1037 NGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAP---GPAGSRGAPGPQG-PRG 1092
Query: 140 GRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGG 199
+ E GA G + PG G P + +P GP G GP
Sbjct: 1093 DKGETGERGAAGIKGHR-GFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGP------- 1144
Query: 200 QQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG 259
PG +G PG + P PG P G G G
Sbjct: 1145 SGPPG-------KDGTSGHPGPIGP----------------PG---PRGNRGERGSEGSP 1178
Query: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGG 302
G G G G GA G G V AAA A GG Y G
Sbjct: 1179 GHPGQPGPPGPPGAPGPCCGGVGAAAIAGIGGEKAGGFAPYYG 1221
Score = 33.9 bits (76), Expect = 1.8
Identities = 37/129 (28%), Positives = 44/129 (34%), Gaps = 13/129 (10%)
Query: 76 ISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMG 135
I + G G PGP +Q G + G P GPP K G P +G
Sbjct: 1105 IKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPP--GKDGTSGH-PGPIG 1161
Query: 136 EPA--GGRYEHPGLGALG-TQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGP 192
P G R E G+ G QP P G GP G A A G GG
Sbjct: 1162 PPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCC-------GGVGAAAIAGIGGEKAG 1214
Query: 193 CFDQHGGQQ 201
F + G +
Sbjct: 1215 GFAPYYGDE 1223
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 115 bits (288), Expect = 5e-25
Identities = 231/990 (23%), Positives = 311/990 (31%), Gaps = 154/990 (15%)
Query: 71 QQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADP------------PGP 118
Q+ P + +G G PQ GP EQ G D G P PGP
Sbjct: 105 QKGEPGDIKDIVGPKGPPGPQ-GPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGP 163
Query: 119 PLLSKPGDEDDAPPKMG-----EPAGGRYEHPGLGALGTQQPPVAV--PGGGGGPAAVPE 171
P PG PP +G + AGG E G LG Q P+ P G GPA P
Sbjct: 164 P--GPPGPP--GPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPG 219
Query: 172 FNNYYGSAA----PASGGPGGRAGPCF-------DQHGGQQSPGMGMMHSASAAAAGAPG 220
+ G+ P GP G GP D G+ A G PG
Sbjct: 220 PQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPG 279
Query: 221 SMD-PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG--------GGSGGGGGGGGA 271
+ P H GYP PG G G G G G G G G A
Sbjct: 280 TPGLPGVKGHRGYPGLDGAKGEA-GAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPA 338
Query: 272 GAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV-----------LSSPRQQGG-- 318
GA GA A G GG G+ G+ G PR + G
Sbjct: 339 GAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTP 398
Query: 319 ------GMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN--QHPSGATPTLNQLLTSPSP 370
G PG G +A G F G P GAT L + P
Sbjct: 399 GSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEP 458
Query: 371 MMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAG--AAAGGQQAAAGMGLGKDMGAQYAAA 428
+ + G P P+ PQ AG G + G+G G + A
Sbjct: 459 GIAGFKGEQGPKGEPG-----PAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPG 513
Query: 429 SPAWAAAQQRSHPAMSPGTPGPT-MGRSQGSPMDPMVMKRPQLYG----MGSNPHSQPQ- 482
+ + + P +PG GP+ + +G+ DP P L G G + PQ
Sbjct: 514 NRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQG 573
Query: 483 ----QSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQ--QQMPPQYGQQGVSGYCQ 536
+P G GPPGPQ G +G+ PG M G P+ P + G++G+ G
Sbjct: 574 KVGPSGAPGEDGRPGPPGPQ----GARGQ-PGVM-GFPGPKGANGEPGKAGEKGLPG--A 625
Query: 537 QGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDL 596
G + + + P P+ + +G PP GKP + +
Sbjct: 626 PGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGV 685
Query: 597 -------NLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPF 649
L+ P GS P + + T S PA P
Sbjct: 686 PGEAGAPGLVGPRGERGFPGERGS----PGAQGLQGPRGLPGTPGTDGPKGASGPAGPP- 740
Query: 650 SPHASPHLSSIPGGPSPSPVGSPVG-----------------SNQSRSGPISPASIPGSQ 692
P L +PG + + P G + +GPI P G+
Sbjct: 741 GAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGAN 800
Query: 693 ------MPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPH 746
PP P GS + ++ P GF + Q G Q
Sbjct: 801 GEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA 860
Query: 747 PSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGIS 806
+PG Q +G Q +G GP+ ++ G QG PP +G P A+ PG
Sbjct: 861 GAPGPQGPSGAPGPQ--GPTGVTGPKGAR-GAQG----PPGATGFPGAAGRVGPPG---- 909
Query: 807 ANNQMHGQGPSQPCGA-VPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMP 865
+N GP P G P G +G R G P+ P ++G PG P
Sbjct: 910 SNGNPGPPGPPGPSGKDGPKGARGDSGPPGR--AGEPGLQGPAGP-PGEKGEPGDDGPSG 966
Query: 866 TVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQP-MNNSSSLMNTQAP 924
+ A Q + FPG+ P +P + + P
Sbjct: 967 AEGPPGPQGLAGQRGIVGLPGQRGERGFPGL--------PGPSGEPGKQGAPGASGDRGP 1018
Query: 925 PYSMAPAMVNSSAASVGLADMMSPGESKLP 954
P + P + A G SPG P
Sbjct: 1019 PGPVGPPGLTGPAGEPGREG--SPGADGPP 1046
Score = 112 bits (281), Expect = 3e-24
Identities = 180/642 (28%), Positives = 213/642 (33%), Gaps = 94/642 (14%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS-KPGDEDDAPPKMGEPA--GG 140
GA G GP E+ + G S G PPGPP KPGD+ P + G P G
Sbjct: 639 GAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQG-VPGEAGAPGLVGP 697
Query: 141 RYEHPGLGALGTQQPPVAVPGGGG--GPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHG 198
R E G G+ PG G GP +P P + GP G +GP G
Sbjct: 698 RGERGFPGERGS-------PGAQGLQGPRGLP--------GTPGTDGPKGASGPA-GPPG 741
Query: 199 GQQSPGMGMMHSASAAA--AGAPGSM-DPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGG 255
Q PG+ M AA AG G D + EG P G + P G G
Sbjct: 742 AQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGR--GLTGPIGPPGPAGA 799
Query: 256 GGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
G G G G G AGA GA A AG G G G+ G
Sbjct: 800 NGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGD 859
Query: 316 QGGGMMMGPGGG-GAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRS 374
G GP G G + A G Q G P A
Sbjct: 860 AGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAA----------------- 902
Query: 375 YGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAA-GGQQAAAGMGLGKDMGAQYAAASPAWA 433
G P S+ + PP P P + GA G AG + G Q A P
Sbjct: 903 -GRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAG-----EPGLQGPAGPPGEK 956
Query: 434 AAQQRSHPAMSPGTPGPTMGRSQ----GSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG 489
P+ + G PGP Q G P P L G P +Q +P
Sbjct: 957 GEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPG---KQGAPGAS 1013
Query: 490 GSYGPPGPQRYPIGIQGRTPGAMAGMQ-YPQQQMPP-QYGQQGVSGYCQQGQQPYYSQQP 547
G GPPGP P G+ G P G + P PP + G GV G + P
Sbjct: 1014 GDRGPPGPVGPP-GLTG--PAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAP 1070
Query: 548 QPPHLPPQAQYLPSQSQQ-RYQPQQDMSQEG-YGTRS-QPPLAP-------GKPNHEDLN 597
PP P A Q + Q M G G R Q P P G+P L
Sbjct: 1071 GPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLK 1130
Query: 598 LIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHL 657
+ L L G P G S ASG G + P P P
Sbjct: 1131 --GHRGFTGLQGLPG-----PPGP----SGDQGASGPAGPSGPRGPPG--PVGPSGKDGA 1177
Query: 658 SSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPG 699
+ IPG P+G P + RSG PA PG+ PP PPG
Sbjct: 1178 NGIPG-----PIGPP--GPRGRSGETGPAGPPGNPGPPGPPG 1212
Score = 108 bits (271), Expect = 4e-23
Identities = 227/904 (25%), Positives = 282/904 (31%), Gaps = 194/904 (21%)
Query: 83 GGAGGGAPQ--PGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPA-- 138
G G PQ GP + Q G + G+ P G P P AP GE
Sbjct: 435 GPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEP---GPAGPQGAPGPAGEEGKR 491
Query: 139 GGRYEHPGLGALGTQQPPVAVPGGGGGPA--AVPEFNNYYG-SAAPASGGPGGRAGPCFD 195
G R E G+G P+ PG G P P + G AP GP G AGP
Sbjct: 492 GARGEPGGVG-------PIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPK-G 543
Query: 196 QHGGQQSPGMGMMHSASAAAAGAPGSMDPL----------QNSHEGYPNSQ-CNHYPGYS 244
+G PG + A G PG P ++ G P Q PG
Sbjct: 544 ANGDPGRPGEPGLPGARGLT-GRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVM 602
Query: 245 RPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSS 304
G G G G G G G G G AA A AG G G G S
Sbjct: 603 GFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPS 662
Query: 305 AGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQL 364
G+ P G G PG G + A G + F G+ P Q
Sbjct: 663 GFQGLPGPPGPPGEGGK--PGDQGVPGEAGAPGLVGPRGERGFPGERGSPGA------QG 714
Query: 365 LTSPSPMMRSYGGSYPEYSS-PSAPP----PPPSQPQSQAAAAGAAAG-----------G 408
L P + + G P+ +S P+ PP PP Q A AG G
Sbjct: 715 LQGPRGLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKG 774
Query: 409 QQAAAGMGLGKDMGAQYAAASPAWAAAQQRS----HPAMSPGTPGPTMGRSQGSPMDPMV 464
+ A G G+ + PA A ++ PA S G G R + P P
Sbjct: 775 PEGAPGKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAG 834
Query: 465 MKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQ----Q 520
P G P ++ +Q G G PGPQ P G G P G+ P+
Sbjct: 835 FAGPP--GADGQPGAKGEQGEAGQKGDAGAPGPQG-PSGAPG--PQGPTGVTGPKGARGA 889
Query: 521 QMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLP-PQAQYLPSQSQQRYQPQQDMSQEGYG 579
Q PP G G G + P + P PP P P + P ++ P + G
Sbjct: 890 QGPP--GATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQ 947
Query: 580 TRSQPPLAPGKPNHED-------------------LNLIQQERPSSLPDLSGSIDDLPTG 620
+ PP G+P + + L Q P L G P+G
Sbjct: 948 GPAGPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPG-----PSG 1002
Query: 621 TEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPG--GP-------------- 664
E A ASG G P + P P PG GP
Sbjct: 1003 -EPGKQGAPGASGDRGPPGPVGPPGLT--GPAGEPGREGSPGADGPPGRDGAAGVKGDRG 1059
Query: 665 ---------SPSPVGSPVGSN-------------QSRSGPISPASIPGSQMPPQPPGSQS 702
+P P GSP + Q GP PA G Q P P G +
Sbjct: 1060 ETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKG 1119
Query: 703 ESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQ 762
E+ P ERG GP P P G A
Sbjct: 1120 EAGE---------PGERGLKGHRGFTGLQGLPGP----------PGPSGDQGA------- 1153
Query: 763 SNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHG-QGPSQPCG 821
SG GP GP+G PGP +G S + +G GP P G
Sbjct: 1154 ---SGPAGPS----GPRG-----------------PPGP-VGPSGKDGANGIPGPIGPPG 1188
Query: 822 AVPLGRMPSAGMQNRP-FPGNMSSMTPSSPGMSQQGGPGMGP----PMPTVNRKAQEAAA 876
P GR G P PG P PG+ G+GP P P +A +AA
Sbjct: 1189 --PRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGPDPLQYMRADQAAG 1246
Query: 877 AVMQ 880
+ Q
Sbjct: 1247 GLRQ 1250
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 115 bits (287), Expect = 6e-25
Identities = 243/959 (25%), Positives = 309/959 (32%), Gaps = 177/959 (18%)
Query: 88 GAPQP----GPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
GAP P GP E + G S G PPGPP K GD+ +A G+P
Sbjct: 194 GAPGPQGFQGPPGEPGEPGA---SGPMGPRGPPGPP--GKNGDDGEA----GKP------ 238
Query: 144 HPGLGALGTQQPPVAVPGGG-GGPAAVPEFNNYYG-SAAPASGGPGGRAGPCFDQHGGQQ 201
G G + PP G G A +P + G S + G G AGP G
Sbjct: 239 ----GRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGP----KGEPG 290
Query: 202 SPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGG--GGGGGGGGG 259
SPG GAPG M P G P + RPGA G G G G
Sbjct: 291 SPGEN----------GAPGQMGP-----RGLPGER-------GRPGAPGPAGARGNDGAT 328
Query: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGG 319
G +G G G AG G A A G G G GS GV P G
Sbjct: 329 GAAGPPGPTGPAGPPG---------FPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPA 379
Query: 320 MMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYG--- 376
GP G A A G A G AG P P+ Q P + G
Sbjct: 380 GAAGPAGNPGADGQPGAKG--ANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPG 437
Query: 377 --GSYPEYSSPSAPPPPPSQ-PQSQAAAAG-AAAGGQQAAAGM-GLGKDMGAQYAAASPA 431
GS + + P P Q P A G A G+ G+ G + G + P
Sbjct: 438 APGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPG 497
Query: 432 WAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGS 491
PA G+PGP G P RP G+ SP P G
Sbjct: 498 ADGVAGPKGPAGERGSPGPA-----GPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGK 552
Query: 492 YGPPGPQRYPIGIQGR-----TPGA--MAG-MQYPQQQ----MPPQYGQQGVSGYCQQGQ 539
GPPG P G GR PGA AG M +P + P + G++GV G G
Sbjct: 553 TGPPG----PAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG--PPGA 606
Query: 540 QPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLI 599
+ + P P+ + P +G + PP GKP
Sbjct: 607 VGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPG------- 659
Query: 600 QQERPSSL--PDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSN-----PAQSPFSP- 651
+Q P L P SG+ + E + +G + G N A +P +P
Sbjct: 660 EQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPG 719
Query: 652 -HASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQ---------MPPQP---P 698
+P L +PG + + P G ++ +GP PG PP P P
Sbjct: 720 SQGAPGLQGMPGERGAAGLPGPKG-DRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAP 778
Query: 699 GSQSESS-SHPA--LSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHA 755
G + ES S PA P +RG + GP PG +
Sbjct: 779 GDKGESGPSGPAGPTGARGAPGDRG---------EPGPPGPAGFAGPPGADGQPGAKGEP 829
Query: 756 GISSFQ-QSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSG----PGPGMGISANNQ 810
G + + + G GP GP GN P A SA G PG +
Sbjct: 830 GDAGAKGDAGPPGPAGP-AGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGP 888
Query: 811 MHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMT--PSSPG-MSQQGGPGMGPPMPTV 867
GP P G P G+ G + P P PG ++G PG P
Sbjct: 889 SGNAGPPGPPG--PAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAP 946
Query: 868 NRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQP-MNNSSSLMNTQAPPY 926
+ A Q + FPG+ P +P S + PP
Sbjct: 947 GTPGPQGIAGQRGVVGLPGQRGERGFPGL--------PGPSGEPGKQGPSGASGERGPPG 998
Query: 927 SMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEK 985
M P GLA PGES EG P E + S G++
Sbjct: 999 PMGPP---------GLAG--PPGES----------GREGAPGAEGSPGRDGSPGAKGDR 1036
Score = 110 bits (275), Expect = 2e-23
Identities = 223/883 (25%), Positives = 278/883 (31%), Gaps = 173/883 (19%)
Query: 73 QHPISNNNSLGGAGGGAPQ--PGPDMEQPQHGGAKDSAAGGQADPPGPP----------- 119
Q P G +G P+ PGP + G A G+ PPGP
Sbjct: 202 QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGL 261
Query: 120 -----------LLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAA 168
L GD A PK GEP PG Q P +PG G P A
Sbjct: 262 PGMKGHRGFSGLDGAKGDAGPAGPK-GEPGS-----PGENGAPGQMGPRGLPGERGRPGA 315
Query: 169 VPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNS 228
A + GP G GP G PG A GA G P
Sbjct: 316 PGPAGARGNDGATGAAGPPGPTGPA----GPPGFPG----------AVGAKGEAGPQGPR 361
Query: 229 HEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAA 288
P G P G G G G G G G GA G A
Sbjct: 362 GSEGPQG----VRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGP 417
Query: 289 AAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFA 348
+ G GG G G+S G S G GP G + G A +R A
Sbjct: 418 SGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVG------VQGPPGPAGEEGKRGA 471
Query: 349 GQNQHPSGATPTLNQLLTSPSPMMRSYGGS--YPEYSSPSAPPPPPSQPQSQAAAAGAAA 406
P+G L P P R GS +P + P P + S A +
Sbjct: 472 RGEPGPTG--------LPGP-PGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGS 522
Query: 407 GGQQAAAG-MGLGKDMGAQYAAASPAWAAAQQRSHPAMS---PGTPGPTMGRSQGSPMDP 462
G+ G GL G + SP PA PG PGP R Q
Sbjct: 523 PGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAG---- 578
Query: 463 MVMKRPQLYGMGSNPHSQPQQSSPYP------------GGSYGPPGPQRYPIGIQG-RTP 509
VM P G P ++ P P G+ GPPGP P G +G + P
Sbjct: 579 -VMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAG-PAGERGEQGP 636
Query: 510 GAMAGMQ-YPQQQMPP----QYGQQGVSGYC-------QQGQQPYYS----QQPQPPHLP 553
G Q P PP + G+QGV G +G++ + Q P P P
Sbjct: 637 AGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGP 696
Query: 554 PQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQER-PSSLPDLSG 612
A P +G + P APG L + ER + LP G
Sbjct: 697 RGANGAP-------------GNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKG 743
Query: 613 SIDDL-PTGTEAT--------LSSAVSASGSTSSQGDQ-----SNPAQSPFSPHASPHLS 658
D P G + + L+ + G + GD+ S PA P +P
Sbjct: 744 DRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPA-GPTGARGAPGDR 802
Query: 659 SIPGGPSPSPVGSPVGSN--------------QSRSGPISPASIPGSQMPPQPPGSQSES 704
PG P P+ P G++ + +GP PA G PP P G+
Sbjct: 803 GEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAG---PPGPIGNVGAP 859
Query: 705 SSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSN 764
+ A + P GF R GP GPS + P PG AG
Sbjct: 860 GAKGARGSAGPPGATGFPGAAGR------VGP--PGPSGNAGP-PGPPGPAG-------- 902
Query: 765 SSGTYGPQMSQYGPQGNYSR--PPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGA 822
G GP+ + GP G PP G P+ PG A QG + G
Sbjct: 903 KEGGKGPR-GETGPAGRPGEVGPPGPPG-PAGEKGSPGADGPAGAPGTPGPQGIAGQRGV 960
Query: 823 VPL-GRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPG-MGPP 863
V L G+ G P P S ++G PG MGPP
Sbjct: 961 VGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPP 1003
Score = 107 bits (266), Expect = 2e-22
Identities = 182/672 (27%), Positives = 217/672 (32%), Gaps = 106/672 (15%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-LLSKPGDEDDAPPKMGEP--AGG 140
GA G GP E+ + G A G P GPP KPG E P +G P +G
Sbjct: 617 GAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPG-EQGVPGDLGAPGPSGA 675
Query: 141 RYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQ 200
R E G G Q PP P G G P + G A A G PG + P G Q
Sbjct: 676 RGERGFPGERGVQGPPG--PAGPRGANGAPGNDGAKGDAG-APGAPGSQGAP-----GLQ 727
Query: 201 QSPGMGMMHSASAAAAGAPGSM----DPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGG 256
PG AAG PG D +G P + G + P G G
Sbjct: 728 GMPG-------ERGAAGLPGPKGDRGDAGPKGADGSPGK--DGVRGLTGPIGPPGPAGAP 778
Query: 257 GGGGGSGGGGGGGGAGAGGAGAGAVA------AAAAAAAAAAGGGGGGGYGGSSAGYGVL 310
G G SG G G GA GA A A A G G G G + G
Sbjct: 779 GDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDA 838
Query: 311 SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGAT--PTLNQLLTSP 368
P G GP G A +K A GSA P GAT P + P
Sbjct: 839 GPPGPAGPAGPPGPIGNVGAPGAKGARGSAG------------PPGATGFPGAAGRVGPP 886
Query: 369 SPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAA 428
P S +A PP P P + G G+ AG +
Sbjct: 887 GP-------------SGNAGPPGPPGPAGKEGGKGPR--GETGPAG------RPGEVGPP 925
Query: 429 SPAWAAAQQRS----HPAMSPGTPGPTMGRSQ----GSPMDPMVMKRPQLYGMGSNPHSQ 480
P A ++ S PA +PGTPGP Q G P P L G P Q
Sbjct: 926 GPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQ 985
Query: 481 PQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYP-QQQMPPQYGQQGVSGYCQQGQ 539
+ G GPPGP P G+ G PG P + P + G G G
Sbjct: 986 GPSGA---SGERGPPGPMG-PPGLAG-PPGESGREGAPGAEGSPGRDGSPGAKG------ 1034
Query: 540 QPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQP--PLAPGKPNHEDLN 597
+ P PP A P P + G + P P P P
Sbjct: 1035 ----DRGETGPAGPPGAPGAPGAP----GPVGPAGKSGDRGETGPAGPAGPVGPVGA-RG 1085
Query: 598 LIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQS-NPAQSPFSPHASPH 656
+ P +G D S G S G+Q + A P P P
Sbjct: 1086 PAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPG 1145
Query: 657 LSSIPGGPS----PSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQ 712
+ PG P P+G P + R+G P PG PP PPG S L Q
Sbjct: 1146 SAGAPGKDGLNGLPGPIGPP--GPRGRTGDAGPVGPPGPPGPPGPPGPPSAGFDFSFLPQ 1203
Query: 713 SPMPQERGFMAG 724
PQE+ G
Sbjct: 1204 P--PQEKAHDGG 1213
Score = 67.8 bits (164), Expect = 1e-10
Identities = 166/663 (25%), Positives = 217/663 (32%), Gaps = 117/663 (17%)
Query: 373 RSYGG-SYPEYSSPSAP---PPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAA 428
+S GG S P PS P P PP P Q G+ A+G MG +
Sbjct: 170 KSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASG-----PMGPR---G 221
Query: 429 SPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYP 488
P A PG PG +G P P G+ +
Sbjct: 222 PPGPPGKNGDDGEAGKPGRPG-----ERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGA 276
Query: 489 GGSYGPPGPQRYPIGIQGR--TPGAMAGMQYPQQQ----MPPQYGQQGVSGYCQQGQQPY 542
G GP GP+ P G G PG M P ++ P G +G G P
Sbjct: 277 KGDAGPAGPKGEP-GSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPG 335
Query: 543 YSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEG-YGTRSQPPLAPGKPNHEDLNLIQQ 601
+ PP P ++ PQ EG G R + PG P
Sbjct: 336 PTGPAGPPGFPGAV-----GAKGEAGPQGPRGSEGPQGVRGE----PGPPG--------- 377
Query: 602 ERPSSLPDLSGS--IDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSS 659
P+ +G+ D P A + ++ + S P Q P P S
Sbjct: 378 --PAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGP-QGPGGPPGPKGNSG 434
Query: 660 IPGGP----------SPSPVG-----SPVGSNQSRS--GPISPASIPGSQMPPQPPGSQS 702
PG P P PVG P G R G P +PG PPG +
Sbjct: 435 EPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPG------PPGERG 488
Query: 703 ESSSHPALSQSPMPQERGF-----MAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGI 757
P RGF +AG + P + P GP SP + G AG+
Sbjct: 489 G------------PGSRGFPGADGVAG-PKGPAGERGSPGPAGPKGSPGEA-GRPGEAGL 534
Query: 758 SSFQ-QSNSSGTYGP--QMSQYGPQGNYSRPPAYSGVPSASYSG-----PGPGMGISANN 809
+ + S G+ GP + GP G R P G P A PGP
Sbjct: 535 PGAKGLTGSPGSPGPDGKTGPPGPAGQDGR-PGPPGPPGARGQAGVMGFPGPKGAAGEPG 593
Query: 810 QMHGQGPSQPCGAV-PLGRMPSAGMQNRPFP----GNMSSMTPS-SPGMSQQGGPGMGPP 863
+ +G P GAV P G+ AG Q P P G P+ SPG QG PG P
Sbjct: 594 KAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGF--QGLPGPAGP 651
Query: 864 MPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQA 923
+ ++ + A S + FPG + G+ P + P + + N A
Sbjct: 652 PGEAGKPGEQGVPGDLGAPGPSGARGERGFPG--ERGVQGPPGP-AGPRGANGAPGNDGA 708
Query: 924 PPYSMAPAMVNSSAASVGLADMMSPGE---SKLPLPLKADGKEEGTPQPESKSKKSSSST 980
+ AP S A GL M PGE + LP P K D + G + K
Sbjct: 709 KGDAGAPGAPGSQGAP-GLQGM--PGERGAAGLPGP-KGDRGDAGPKGADGSPGKDGVRG 764
Query: 981 TTG 983
TG
Sbjct: 765 LTG 767
Score = 51.6 bits (122), Expect = 8e-06
Identities = 136/559 (24%), Positives = 181/559 (32%), Gaps = 104/559 (18%)
Query: 482 QQSSPYPGGSYGPPGP--------QRYPIGIQGRTPGAMA-----GMQYPQ--QQMPPQY 526
Q P P G GPPGP + G ++ G ++ G P+ P
Sbjct: 137 QPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAP 196
Query: 527 GQQGVSGYCQQGQQPYYS--QQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQP 584
G QG G + +P S P+ P PP ++ + +P + G R P
Sbjct: 197 GPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLP 256
Query: 585 PLA--PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSS-----AVSASGSTSS 637
A PG H S L G D P G + S A G
Sbjct: 257 GTAGLPGMKGHRGF--------SGLDGAKG--DAGPAGPKGEPGSPGENGAPGQMGPRGL 306
Query: 638 QGDQSNP-AQSPFSPHASPHLSSIPGGPSPS-PVGSP-----VGSN-----QSRSGPISP 685
G++ P A P + + G P P+ P G P VG+ Q G P
Sbjct: 307 PGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGP 366
Query: 686 ASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGF--MAGTQRNP-QMAQYGPQQTGPS 742
+ G PP P G+ + + A Q G +AG P GPQ GP
Sbjct: 367 QGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQ--GPG 424
Query: 743 MSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQ--YGPQGNYSR-----PPAYSGVPSAS 795
P P S + + G GP Q GP G + P +G+P
Sbjct: 425 GPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPP 484
Query: 796 YSGPGPG-MGISANNQMHG-QGPSQPCGAV-PLGRMPSAGMQNRP----FPGNMS-SMTP 847
GPG G + + G +GP+ G+ P G S G RP PG + +P
Sbjct: 485 GERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSP 544
Query: 848 SSPGMSQQGGP--------GMGPPMPTVNRKAQEAAAAVM------QAAANSAQSRQGSF 893
SPG + GP GPP P R A VM AA ++ +
Sbjct: 545 GSPGPDGKTGPPGPAGQDGRPGPPGPPGAR----GQAGVMGFPGPKGAAGEPGKAGERGV 600
Query: 894 PGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKL 953
PG P + Q PP PA G SPG L
Sbjct: 601 PG----------PPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAG-----SPGFQGL 645
Query: 954 PLPLKADGK-----EEGTP 967
P P G+ E+G P
Sbjct: 646 PGPAGPPGEAGKPGEQGVP 664
Score = 47.0 bits (110), Expect = 2e-04
Identities = 60/203 (29%), Positives = 66/203 (32%), Gaps = 35/203 (17%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGR 141
L G G + GP + G G A PPG + AP G P GR
Sbjct: 975 LPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPG------ESGREGAPGAEGSP--GR 1026
Query: 142 YEHPGL----GALGTQQPPVA--VPGGGG--GPAAVPEFNNYYGSAAPASG-GPGGRAGP 192
PG G G PP A PG G GPA G A PA GP G GP
Sbjct: 1027 DGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGP 1086
Query: 193 CFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGG 252
G Q P + G G H G+ Q G P G
Sbjct: 1087 -----AGPQGPRGDKGETGEQGDRGIKG--------HRGFSGLQ-----GPPGPPGSPGE 1128
Query: 253 GGGGGGGGGSGGGGGGGGAGAGG 275
G G G +G G G AGA G
Sbjct: 1129 QGPSGASGPAGPRGPPGSAGAPG 1151
Score = 37.7 bits (86), Expect = 0.12
Identities = 67/251 (26%), Positives = 80/251 (31%), Gaps = 50/251 (19%)
Query: 661 PGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG 720
P GP P G P R G +PG PP PPG P L + PQ
Sbjct: 119 PRGPR-GPAGPP-----GRDGIPGQPGLPGPPGPPGPPGP-------PGLGGNFAPQ--- 162
Query: 721 FMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQ----QSNSSGTYGPQMSQY 776
G P GPS P PG G FQ + G GP M
Sbjct: 163 LSYGYDEKSTGGISVPGPMGPS-GPRGLPGPPGAPGPQGFQGPPGEPGEPGASGP-MGPR 220
Query: 777 GPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPL-GRMPSAGMQ- 834
GP G PP +G + PG +GP P GA L G GM+
Sbjct: 221 GPPG----PPGKNGDDGEAGKPGRPG----------ERGPPGPQGARGLPGTAGLPGMKG 266
Query: 835 NRPFPGNMSSM----------TPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAAN 884
+R F G + P SPG + G PG P + + A A N
Sbjct: 267 HRGFSGLDGAKGDAGPAGPKGEPGSPG--ENGAPGQMGPRGLPGERGRPGAPGPAGARGN 324
Query: 885 SAQSRQGSFPG 895
+ PG
Sbjct: 325 DGATGAAGPPG 335
Score = 35.4 bits (80), Expect = 0.62
Identities = 75/331 (22%), Positives = 97/331 (29%), Gaps = 36/331 (10%)
Query: 1110 PSPANSGSLQGPQTPQ-STGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDP 1168
P P GP+ S G + + + G + PP PA P + G +
Sbjct: 739 PGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGA 798
Query: 1169 FSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQG 1228
D + P P G + P P + G + G P G
Sbjct: 799 PGDRGE----------PGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAG 848
Query: 1229 QMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYG 1288
P + ++ GA + G FP A R P G G P G P
Sbjct: 849 --PPGPIGNVGAPGAKGARGSAGPPGATGFPGAAG---RVGPPGPS--GNAGPPGPPGPA 901
Query: 1289 GHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYG--------GSY 1340
G + G P+ G GPP + G G
Sbjct: 902 GKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVV 961
Query: 1341 SGPDRRPIQG--QYPYPYSRERMQGPGQIQTHGIPPQMMG-----GPLQSSSSEG-PQQN 1392
P +R +G P P QGP PP MG GP S EG P
Sbjct: 962 GLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAE 1021
Query: 1393 MWAARNDMPYPYQNR--QGPGGPTQAPPYPG 1421
R+ P +R GP GP AP PG
Sbjct: 1022 GSPGRDGSPGAKGDRGETGPAGPPGAPGAPG 1052
Score = 35.0 bits (79), Expect = 0.80
Identities = 88/379 (23%), Positives = 121/379 (31%), Gaps = 68/379 (17%)
Query: 1086 ERGEEPPPEVFSTGDTKKQPKLQ-PPSPANSGSLQGPQTPQST----------------G 1128
ERG PP + Q PP PA +G Q P + G
Sbjct: 597 ERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAG 656
Query: 1129 SNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDP--FSDVSDSSFPKRNSMTPN 1186
VPGDL P P+ + P + G P + + K ++ P
Sbjct: 657 KPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPG 716
Query: 1187 APYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYN----QS 1242
AP QG P + G MP E G + G + P G ++ +
Sbjct: 717 APGSQG--APGLQG-MPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPG 773
Query: 1243 PSGAMSNLGMGQRQQFPYGAS--YDRRHEPYGQQYPGQGPPSG--QPPYGGHQPGLYPQQ 1298
P+GA + G + P G + R P + PG P+G PP QPG +
Sbjct: 774 PAGAPGDKG----ESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEP 829
Query: 1299 PNYKRHMD-------GMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQ 1351
+ D G GPP G + N+ + GS P G
Sbjct: 830 GDAGAKGDAGPPGPAGPAGPP-----GPIGNVGAPGAKGAR-----GSAGPP------GA 873
Query: 1352 YPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARN-------DMPYPY 1404
+P + R+ PG G P GP +GP+ A P P
Sbjct: 874 TGFPGAAGRVGPPGPSGNAG--PPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPA 931
Query: 1405 QNRQGPG--GPTQAPPYPG 1421
+ PG GP AP PG
Sbjct: 932 GEKGSPGADGPAGAPGTPG 950
Score = 33.5 bits (75), Expect = 2.3
Identities = 33/107 (30%), Positives = 42/107 (39%), Gaps = 11/107 (10%)
Query: 70 QQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-LLSKPGDE- 127
+Q I + G G PG EQ G A G A P GPP PG +
Sbjct: 1101 EQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSG------ASGPAGPRGPPGSAGAPGKDG 1154
Query: 128 -DDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFN 173
+ P +G P G R G +G PP PG G P+A +F+
Sbjct: 1155 LNGLPGPIG-PPGPRGRTGDAGPVGPPGPP-GPPGPPGPPSAGFDFS 1199
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 111 bits (277), Expect = 9e-24
Identities = 210/819 (25%), Positives = 270/819 (32%), Gaps = 125/819 (15%)
Query: 77 SNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP-LLSKPGDE-----DDA 130
S N G+ G PGP E+ + G + G A PPGPP L PG D
Sbjct: 357 SGNKGEPGSAGPQGPPGPSGEEGKRG---PNGEAGSAGPPGPPGLRGSPGSRGLPGADGR 413
Query: 131 PPKMGEPA----------------GGRYEHPGL-GALGTQQPPVAV-PGGGGGPAAVPEF 172
MG P GR PGL G G P + P G GP +P
Sbjct: 414 AGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGI 473
Query: 173 NNYYGSAAPAS--GGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHE 230
+ G PA G PG P G H+ A A GAPG N +
Sbjct: 474 DGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDG--NNGAQ 531
Query: 231 GYPNSQ----------------CNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAG 274
G P Q PG S P G G G G G G G G
Sbjct: 532 GPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGER 591
Query: 275 GAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLS 333
G + AA + G G G G+ GV+ + G G PG GAA +
Sbjct: 592 GPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAAGIP 651
Query: 334 KAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPP-- 391
G + G N GA + +P P + + P+ P P
Sbjct: 652 GGKGEKGEPGLRGEIG-NPGRDGARGAPG-AVGAPGPAGATGDRGEAGAAGPAGPAGPRG 709
Query: 392 ---------PSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPA 442
P+ P A AGAA GQ A G K + P + PA
Sbjct: 710 SPGERGEVGPAGPNGFAGPAGAA--GQPGAKGERGAKGPKGENGVVGPTGPVG--AAGPA 765
Query: 443 MSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPI 502
G PGP R G P GM P + + P P G GPPGP P
Sbjct: 766 GPNGPPGPAGSRGDGGPP-----------GMTGFPGAAGRTGPPGPSGISGPPGPPG-PA 813
Query: 503 GIQG-RTPGAMAGMQYPQQQM----PPQY-GQQGVSGYCQQGQQPYYSQQPQPPHLPPQA 556
G +G R P G ++ PP + G++G SG P + PQ P
Sbjct: 814 GKEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEAGTAGPP-GTPGPQGLLGAPGI 872
Query: 557 QYLPSQSQQRYQP--QQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSI 614
LP +R P + + G + PP A G P P ++G+
Sbjct: 873 LGLPGSRGERGLPGVAGAVGEPGPLGIAGPPGARGPPG-----------AVGSPGVNGA- 920
Query: 615 DDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSP-SPVGSPV 673
EA G G + + + + P G P P PVG P
Sbjct: 921 -----PGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGP--VGAAGAPGPHGPVG-PA 972
Query: 674 GSNQSR-----SGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRN 728
G + +R SGP+ PA G + P P G + + +P +G G Q
Sbjct: 973 GKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGH-NGLQGL 1031
Query: 729 PQMA-----QYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNY- 782
P +A Q P GP+ P G AG ++ GT GP + GPQG+
Sbjct: 1032 PGIAGHHGDQGAPGSVGPA-GPRGPAGPSGPAGKDG--RTGHPGTVGPAGIR-GPQGHQG 1087
Query: 783 -SRPPAYSGVPS-ASYSGPGPGMGISANNQMHGQGPSQP 819
+ PP G P SG G G + Q S P
Sbjct: 1088 PAGPPGPPGPPGPPGVSGGGYDFGYDGDFYRADQPRSAP 1126
Score = 104 bits (260), Expect = 8e-22
Identities = 208/892 (23%), Positives = 274/892 (30%), Gaps = 159/892 (17%)
Query: 87 GGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPG 146
G A GP E+ G G PPGPP PG PP +G +Y+ G
Sbjct: 33 GPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPP--GPPG-----PPGLGGNFAAQYDGKG 85
Query: 147 LGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA----PASGGPGGRAGPCFDQHGGQQS 202
+G LG + P G G A P + G A P GP G GP G
Sbjct: 86 VG-LGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGP-----AGPPG 139
Query: 203 PGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGS 262
H G G + P G+P + PG+ G G G G
Sbjct: 140 KAGEDGHPGKPGRPGERGVVGP--QGARGFPGTP--GLPGFKGIRGHNGLDGLKGQPGAP 195
Query: 263 GGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMM 322
G G G G G A G G G GS G + G
Sbjct: 196 GVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSA--- 252
Query: 323 GPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEY 382
GP G A K G+ N P+G ++ P
Sbjct: 253 GPPGFPGAPGPKGEIGAVG---------NAGPAGPAGPRGEV-------------GLPGL 290
Query: 383 SSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM----------GLGKDMGAQYAAASPAW 432
S P PP P A A G A G+ G GA+ P
Sbjct: 291 SGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGP 350
Query: 433 AAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPY-PGGS 491
A ++ S PG+ GP QG P P + + P GS
Sbjct: 351 AGSKGESGNKGEPGSAGP-----QGPP----------------GPSGEEGKRGPNGEAGS 389
Query: 492 YGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPH 551
GPPGP G++G +PG+ + +P G+ GV G
Sbjct: 390 AGPPGPP----GLRG-SPGS--------RGLPGADGRAGVMG------------------ 418
Query: 552 LPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLS 611
PP ++ + R P D + G P PG P ++ +E P LP +
Sbjct: 419 -PPGSRGASGPAGVR-GPNGDAGRPGEPGLMGPRGLPGSPG--NIGPAGKEGPVGLPGID 474
Query: 612 GSIDDL-PTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVG 670
G + P G + G +G +P ++ HA L+ G P P
Sbjct: 475 GRPGPIGPAGARGEPGNI----GFPGPKGPTGDPGKNGDKGHAG--LAGARGAPGPD--- 525
Query: 671 SPVGSNQSRSGPISPASI---PGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQR 727
N GP P + G Q PP PPG Q + P ERG
Sbjct: 526 ----GNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGL------ 575
Query: 728 NPQMAQYG-PQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPP 786
++G P GP P PG AG + S G GP GP GN P
Sbjct: 576 ---HGEFGLPGPAGPRGERGP-PGESGAAGPTG--PIGSRGPSGPP----GPDGNKGEPG 625
Query: 787 AYSGVPSASYSGPG--PGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQN-RPFPGNMS 843
V +A SGP PG A G+G G G + + G R PG +
Sbjct: 626 VVGAVGTAGPSGPSGLPGER-GAAGIPGGKGEKGEPGL--RGEIGNPGRDGARGAPGAVG 682
Query: 844 SMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMA 903
+ P+ + GP P R + V A N G+ G
Sbjct: 683 APGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERG 742
Query: 904 SSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVG-LADMMSPGESKLP 954
+ P + ++ P + PA N G D PG + P
Sbjct: 743 AKGP-----KGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTGFP 789
Score = 53.9 bits (128), Expect = 2e-06
Identities = 82/294 (27%), Positives = 101/294 (34%), Gaps = 62/294 (21%)
Query: 73 QHPISNNNSLGGAG--GGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDA 130
Q P+ +G G G A + GP S G A PPG P P A
Sbjct: 825 QGPVGRTGEVGAVGPPGFAGEKGP------------SGEAGTAGPPGTP---GPQGLLGA 869
Query: 131 PPKMGEPAGGRYEH--PGLGALGTQQPPVAV---PGGGGGPAAV--PEFNNYYGSAA--- 180
P +G P G R E PG+ + P+ + PG G P AV P N G A
Sbjct: 870 PGILGLP-GSRGERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDG 928
Query: 181 -PASGGPGGRAGPCFDQHGGQQS-PGMGMMHSASAAAAGAPGSMDPLQ------NSHEGY 232
P + GP GR G H G++ PG + AAGAPG P+ N E
Sbjct: 929 NPGNDGPPGRDGQ--PGHKGERGYPG----NIGPVGAAGAPGPHGPVGPAGKHGNRGETG 982
Query: 233 PNSQCNHY--------------------PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAG 272
P+ PG P G G G G G G G G
Sbjct: 983 PSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQG 1042
Query: 273 AGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGG 326
A G+ A A + AG G G+ G+ G+ QG GP G
Sbjct: 1043 APGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGIRGPQGHQGPAGPPGPPG 1096
>gi|5453638 AT rich interactive domain 3B [Homo sapiens]
Length = 560
Score = 106 bits (264), Expect = 3e-22
Identities = 93/333 (27%), Positives = 155/333 (46%), Gaps = 41/333 (12%)
Query: 818 QPCGAVPLGRM----PSAGMQNRPFPGNMSSMTPSSPG-MSQQGGPGMGPPMPTVNRKAQ 872
+P G+ PLG + P+A + GNM+S G + + G + +
Sbjct: 59 RPSGSTPLGPLARVPPTAAVAQVFERGNMNSEPEEEDGGLEDEDG----------DDEVA 108
Query: 873 EAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAM 932
E A QAA+ ++ +A P PM+N L PP+
Sbjct: 109 EVAEKETQAASKYFHVQK-----------VARQDPRVAPMSNL--LPAPGLPPHGQQAKE 155
Query: 933 VNSSAASVGLADMMSPGESKLPLP--LKADGKEEGTPQPESKSKKSSSSTTTGEKITKVY 990
++ AS + + G+ L LK +G + + + S K+Y
Sbjct: 156 DHTKDASKASPSVSTAGQPNWNLDEQLKQNGGLAWSDDADGGRGREIS-----RDFAKLY 210
Query: 991 ELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKK 1050
EL +PERK ++D FM++RG+P++ +P + K+ LDL+ LY V E GGL ++ K
Sbjct: 211 ELDGDPERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKI 270
Query: 1051 WRELATNLNVGTS-SSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQP 1109
WRE+ LN+ TS +SAA +L+ QY++YL+A+EC+ ++ P E+ + D ++ +
Sbjct: 271 WREITKGLNLPTSITSAAFTLRTQYMKYLYAYECE-KKALSSPAELQAAIDGNRR---EG 326
Query: 1110 PSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPP 1142
P+ S SL G +P + + + A P L PP
Sbjct: 327 RRPSYSSSLFG-YSPAAATAAAAAGAPALLSPP 358
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 105 bits (262), Expect = 5e-22
Identities = 300/1392 (21%), Positives = 472/1392 (33%), Gaps = 186/1392 (13%)
Query: 74 HPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPK 133
H S+ +S G G+ G QHG ++ G+ + G +
Sbjct: 468 HESSSEHSSGYTQHGSGS-GHSSGHGQHGSRSGQSSRGE----------RQGSSAGSSSS 516
Query: 134 MGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNY----YGSAAPASGGP--- 186
G+ G + G G+ P G + + ++Y YGS +S GP
Sbjct: 517 YGQHGSGSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQSSSYGPHGYGSGRSSSRGPYES 576
Query: 187 --GGRAGPCFDQHGGQQSPGMGMMHSAS---------------AAAAGAPGSMDPLQNSH 229
G +G + QS G G S+S +++ G G+ +SH
Sbjct: 577 GSGHSSGLGHQESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGATSGQSSSH 636
Query: 230 EGYPNSQCNHYPGYSRPGAGGG-----GGGGGGGGGGSGGGGGGGGAGAGGAGA--GAVA 282
G S + Y + G+G G G G G S G G G+G + G+V+
Sbjct: 637 -GQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWSSSNGPHGSVS 695
Query: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQG--GGMMMGPGGGGAASLSKAAAGSA 340
++ +G G GY +G S R+ G G G++S ++ G
Sbjct: 696 GQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYGQH 755
Query: 341 AGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAA 400
G + +G + SG+ + +++ S S G + +S S S +
Sbjct: 756 GSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCS------SSCGHYES 809
Query: 401 AAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPM 460
+G A+G Q +G G G +Q+ +AS ++ S G G T G+S S
Sbjct: 810 GSGQASGFGQHESGSGQGY---SQHGSASGHFS----------SQGRHGSTSGQSSSSGQ 856
Query: 461 DPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTP-----GAMAGM 515
+ YG + + GS PG + G G++P G+ +G
Sbjct: 857 HDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSG-SGQSPSYGRHGSGSGR 915
Query: 516 QYPQQQMPPQYGQQGVSGY-CQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMS 574
+ GQ G+ GQ Y+Q + S+S Q + +Q S
Sbjct: 916 SSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRSEQHGS 975
Query: 575 QEG-------YGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSS 627
G +G+ S+ L G+ Q PS SGS G ++
Sbjct: 976 SSGSSSSYGQHGSGSRQSLGHGQ---HGSGSGQSPSPSRGRHGSGS------GQSSSYGP 1026
Query: 628 AVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPAS 687
S SG +SS+G P +S S H S + S S S G + S SG S
Sbjct: 1027 YRSGSGWSSSRG----PYES-----GSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHG 1077
Query: 688 IPGSQMPP-----QPPGSQSESSSH----PALSQSPMPQERGFMAGTQRNPQMAQYGP-Q 737
GS Q S +SSSH SQS +G +G+ ++P Q G
Sbjct: 1078 QHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQG--SGSGQSPGHGQRGSGS 1135
Query: 738 QTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYS 797
+ PS H S G+ + S +G S G +YS+ + SG S+ Y
Sbjct: 1136 RQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSG-HSSGYG 1194
Query: 798 GPGPGMGISANNQMHG--QGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQ 855
G G S+ + HG G S G G S+G G S + SP +
Sbjct: 1195 QHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSG------HGRQGSGSGHSPSRGRH 1248
Query: 856 GGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQG--SFPGMNQSGLMASSSPYSQPMN 913
G G+G + Q + + ++ +SR G S G ++SG SS YSQ +
Sbjct: 1249 GS-GLGHS----SSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESG-SGHSSAYSQHGS 1302
Query: 914 NSSSLMNT-QAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESK 972
S + Q S + + +S G + S G+ Q S+
Sbjct: 1303 GSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSPSR 1362
Query: 973 SKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRL 1032
+ S S + G W + GS G ++
Sbjct: 1363 GRHGSGSGHSS-------SYGQHGSGSGW----SSSSGRHGSGSGQSSGFGHHESSSWQS 1411
Query: 1033 YVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIER----- 1087
C + G + ++ + + G ++S Y Q+ +
Sbjct: 1412 SGCTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGS 1471
Query: 1088 --GEEPPPEVFSTGDTKKQPKLQPPSPANSG--SLQGPQTPQSTGSNSMAEVPGDLKPPT 1143
G+ P P G Q P + SG S +GP S+ S+ + G + +
Sbjct: 1472 GSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGL----GHRESRS 1527
Query: 1144 PASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQ---GMSMPDVMG 1200
S+ +GQ G SST H S S S S ++ + Q G S G
Sbjct: 1528 GQSSGYGQ-HGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYG 1586
Query: 1201 RMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPY 1260
R + P G R P + G+ + S +S S G+G+ F +
Sbjct: 1587 RQGSGSGQSPGHGQRGSGSRQSP--SYGRHGSGS-----GRSSSSGQHGSGLGESSGFGH 1639
Query: 1261 GASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDM 1320
S + Y Q G G SG +G Q +RH +
Sbjct: 1640 HESSSGQSSSYSQHGSGSGHSSGYGQHGSRS----GQSSRGERH-------GSSSRSSSR 1688
Query: 1321 YNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGP 1380
Y S +Q + +G SG + P +G++ G G +HG G
Sbjct: 1689 YGQHGSGSRQS--SGHGRQGSGSGQSPSRGRHG--------SGLGHSSSHG----QHGSG 1734
Query: 1381 LQSSSSEGPQQN 1392
SSS GP ++
Sbjct: 1735 SGRSSSRGPYES 1746
Score = 100 bits (248), Expect = 2e-20
Identities = 220/965 (22%), Positives = 325/965 (33%), Gaps = 116/965 (12%)
Query: 73 QHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPP 132
QH S+ S G + G+ G QHG ++ G+ + +
Sbjct: 233 QHKSSSGQSSGYSQHGSGS-GHSSGYGQHGSRSGQSSRGE----------RHRSSSGSSS 281
Query: 133 KMGEPAGGRYEHPGLG--ALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGG---PG 187
G+ G + G G G++Q P V G G + + GS+ S G G
Sbjct: 282 SYGQHGSGSRQSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHGSGSSYSYSRGHYESG 341
Query: 188 GRAGPCFDQH-------GGQQSPGMGMMHSAS----------AAAAGAPGSMDPLQNSHE 230
F QH G G G HS+S A+++G GS Q+S
Sbjct: 342 SGQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGSTSGQASSSGQHGSSSR-QSSSY 400
Query: 231 GYPNSQCNHYPGYSRPGAGGGGGGGGGG-GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAA 289
G S H G + +G G G G G GSG G G G ++++
Sbjct: 401 GQHESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSSGQHGTG------FGRSSSSGP 454
Query: 290 AAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAA-----GSAAGGF 344
+G G G+G + S Q G G G G S S ++ GS+AG
Sbjct: 455 YVSGSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAGSS 514
Query: 345 QRFAGQNQHPSGATPTLNQLL------TSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ 398
+ QH SG+ +L SPSP G + S S+ P +
Sbjct: 515 SSY---GQHGSGSRQSLGHSRHGSGSGQSPSPSR----GRHESGSRQSSSYGPHGYGSGR 567
Query: 399 AAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGS 458
+++ G G ++G+G + Q S + S + + G G T G+S
Sbjct: 568 SSSRGPYESGSGHSSGLGHQESRSGQ----SSGYGQHGSSSGHSSTHGQHGSTSGQSSSC 623
Query: 459 PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTP----GAMAG 514
+ +G + SQ + GS P R+ + G+ +G
Sbjct: 624 GQHGATSGQSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSG 683
Query: 515 MQYPQQQMPPQYGQQGVSGY-CQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDM 573
GQ G+ GQ YSQ + S+S Q + +Q
Sbjct: 684 WSSSNGPHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSGQSSRSEQHG 743
Query: 574 SQEG-------YGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLS 626
S G +G+ S G+ + + R S S S +GT + S
Sbjct: 744 SSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCSSS 803
Query: 627 SA--VSASGSTSSQGDQSNPAQSPFSPH--ASPHLSSIPGGPSPSPVGSPVGSNQSRSGP 682
S SG S G + + +S H AS H SS S S S G + S SG
Sbjct: 804 CGHYESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGSTSGQSSSSGQHDSSSGQ 863
Query: 683 ISPASIPGSQMPPQPPGSQSESSSHPA---------LSQSPMPQERGFMAGTQRNPQMAQ 733
S Q ES+SH A QSP +RG +G+ ++P +
Sbjct: 864 SSSY-------------GQHESASHHASGRGRHGSGSGQSPGHGQRG--SGSGQSPSYGR 908
Query: 734 YGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPS 793
+G S S G +G S S Y S G +Y + + SG S
Sbjct: 909 HGSGSGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGSRSGQSS 968
Query: 794 ASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMS 853
S G G S++ HG G Q G G +G P P S G S
Sbjct: 969 RS-EQHGSSSGSSSSYGQHGSGSRQSLGHGQHG----SGSGQSPSPSR--GRHGSGSGQS 1021
Query: 854 QQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMN 913
GP + +R E+ + + +SR G G Q G +SS S
Sbjct: 1022 SSYGPYRSGSGWSSSRGPYESGSG-HSSGLGHRESRSGQSSGYGQHG--SSSGHSSTHGQ 1078
Query: 914 NSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKS 973
+ S+ + + A + +SS G S G + G+ G Q S S
Sbjct: 1079 HGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQG---SGSGQSPGHGQRGSGS 1135
Query: 974 KKSSS 978
++S S
Sbjct: 1136 RQSPS 1140
Score = 98.6 bits (244), Expect = 6e-20
Identities = 314/1466 (21%), Positives = 456/1466 (31%), Gaps = 161/1466 (10%)
Query: 67 QQQQQQQHPISN--NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKP 124
Q + +QH S+ ++S G G G+ Q Q G S + +
Sbjct: 735 QSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQH 794
Query: 125 GDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG 184
G G G + G G + G G G + + ++ S
Sbjct: 795 GSGTSCSSSCGHYESGSGQASGFGQHES--------GSGQGYSQHGSASGHFSSQGRHGS 846
Query: 185 GPGGRAGPCFDQHGGQQSPGMGMMHSAS--AAAAGAPGSMDPLQNSHEGYPNSQCNHYPG 242
G + QS G SAS A+ G GS H G S P
Sbjct: 847 TSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGH-GQRGSGSGQSPS 905
Query: 243 YSRPGAGGGGGGGGGG-GGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAA----GGGGG 297
Y R G+G G G G GSG G G + G +G + + +++ G G
Sbjct: 906 YGRHGSGSGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGSRSG 965
Query: 298 --------GGYGGSSAGYGVLSS-PRQQGGGMMMGPGGGGAASLSKAAAGSAAG------ 342
G GSS+ YG S RQ G G G G + S S+ GS +G
Sbjct: 966 QSSRSEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYG 1025
Query: 343 ------GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYG--GSYPEYSSPSAPPPPPSQ 394
G+ G + SG + L S S YG GS +SS S
Sbjct: 1026 PYRSGSGWSSSRGPYESGSGHSSGLGHR-ESRSGQSSGYGQHGSSSGHSSTHGQHGSTSG 1084
Query: 395 PQSQAAAAGAAAGGQQAAAGMGLGKDMGAQY------AAASPAWAAAQQRSHPAMSPGTP 448
S GA++G + G G + Y + SP S + S G
Sbjct: 1085 QSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRH 1144
Query: 449 GPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGS-----YGPPGPQRYPIG 503
G GRS S + +G + Q S + GS YG G R
Sbjct: 1145 GSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHG-SRSGQS 1203
Query: 504 IQGRTPGAMAGMQYPQQQMPPQYGQQGV-----SGYCQQGQQPYYSQQPQPPHLPPQAQY 558
+G G+ +G YGQ G SG+ +QG +S P +
Sbjct: 1204 SRGERHGSSSGSS-------SHYGQHGSGSRQSSGHGRQGSGSGHS--PSRGRHGSGLGH 1254
Query: 559 LPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGK----PNHEDL---------NLIQQERPS 605
S Q + S+ Y +RS G+ H + Q +
Sbjct: 1255 SSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHG 1314
Query: 606 SLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPS 665
S S + D + T + S SGS+ S G + A S SP H S
Sbjct: 1315 STSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSPSRGRHGSG------ 1368
Query: 666 PSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGT 725
S S G + S SG S + GS ESSS QS + G +G+
Sbjct: 1369 -SGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSW----QSSGCTQHG--SGS 1421
Query: 726 QRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRP 785
+ Q+G + S G+ H SS S+S G +G Q G +
Sbjct: 1422 GHSSSYEQHGSRSGQSSR-------GERHG--SSSGSSSSYGQHGSGSRQSLGHGQHGSG 1472
Query: 786 PAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSM 845
S PS G G G S + G G S G G S+G+ G+ S
Sbjct: 1473 SGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGL------GHRESR 1526
Query: 846 TPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQS-----G 900
+ S G Q G + +++ Q A+S QS G S G
Sbjct: 1527 SGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYG 1586
Query: 901 LMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAAS------------VGLADMMSP 948
S S S P + + Q+P Y + S++S G + S
Sbjct: 1587 RQGSGSGQS-PGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSG 1645
Query: 949 GESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTF 1008
S G G Q S+S +SS G G R +
Sbjct: 1646 QSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGS----RQSSG 1701
Query: 1009 MEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAAS 1068
+GS P+ G+ L + G + + + + + +V + S
Sbjct: 1702 HGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGS 1761
Query: 1069 SLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKL--QPPSPANSGSLQGPQTPQS 1126
Y Q+ +G+ G T Q Q S S G S
Sbjct: 1762 GHSSAYSQHGSGSGHFCSQGQH--------GSTSGQSSTFDQEGSSTGQSSSHGQHGSGS 1813
Query: 1127 TGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPN 1186
+ S+S + G +P+ HG + G SS+ H S S SS + +
Sbjct: 1814 SQSSSYGQ-QGSGSGQSPSRGRHGSGS----GHSSSYGQHGSGSGWSSSSGRHGSGSGQS 1868
Query: 1187 APYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSM--QDMYNQSPS 1244
+ + S + + GS ++G+ SS Y Q S
Sbjct: 1869 SGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGEQHGSSSGSSSSYGQHGS 1928
Query: 1245 GAMSNLGMGQRQQFPYGASYDRRHEP-YGQQYPGQGPPSGQPPYGGHQPGLYPQQP--NY 1301
G+ +LG GQ +G+ + P G+ G G S PYG + P +
Sbjct: 1929 GSRQSLGHGQ-----HGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSSSRGPYESG 1983
Query: 1302 KRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQ-GQYPYPYSRER 1360
H G+ ++ + Y SS + GS SG Q G S
Sbjct: 1984 SGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGASSGQSSSHG 2043
Query: 1361 MQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYP 1420
G G Q+ G Q G S S G Q +R Y + P
Sbjct: 2044 QHGSGSSQSSGYGRQGSG----SGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGP 2099
Query: 1421 GMNRTDDMMVPDQRINHESQWPSHVS 1446
G+ + + S + H S
Sbjct: 2100 GLGESSGFGHHESSSGQSSSYSQHGS 2125
Score = 97.1 bits (240), Expect = 2e-19
Identities = 321/1458 (22%), Positives = 451/1458 (30%), Gaps = 159/1458 (10%)
Query: 44 HHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGG 103
HH + Q + + Q Q S +S G G + Q G
Sbjct: 1169 HHESSSGQSSSYSQHGSGSGHSSGYGQHGSR--SGQSSRGERHGSSSGSSSHYGQHGSGS 1226
Query: 104 AKDSAAGGQADPPG-PPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG- 161
+ S G Q G P + G G+ G G ++ +V G
Sbjct: 1227 RQSSGHGRQGSGSGHSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQ 1286
Query: 162 ---GGGGPAAVPEFNNYYGSAAPASGGPGGRAGPC--FDQHG---GQQSP----GMGMMH 209
G G +A + + G + G G +G FDQ G GQ S G G
Sbjct: 1287 HESGSGHSSAYSQHGSGSGHFC-SQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQ 1345
Query: 210 SASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGG-GGGSGGGGGG 268
S+ GA P + H S H Y + G+G G G G GSG G
Sbjct: 1346 SSGYGRHGAGSGQSPSRGRH----GSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGF 1401
Query: 269 G----------GAGAGGAGAGAVAAA---AAAAAAAAGGGGGGGYGGSSAGYGVLSS-PR 314
G G G+G+G ++ + + ++ G G GSS+ YG S R
Sbjct: 1402 GHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSR 1461
Query: 315 QQGGGMMMGPGGGGAASLSKAAAGSAAG------------GFQRFAGQNQHPSGATPTLN 362
Q G G G G + S S+ GS +G G+ G + S + L
Sbjct: 1462 QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGLG 1521
Query: 363 QLLTSPSPMMRSYG--GSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKD 420
S S YG GS +SS S S GA++G + G G
Sbjct: 1522 HR-ESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSS 1580
Query: 421 MGAQY------AAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMG 474
+ Y + SP S + S G G GRS S + +G
Sbjct: 1581 QSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHH 1640
Query: 475 SNPHSQPQQSSPYPGGS-----YGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQ 529
+ Q S + GS YG G R +G G+ + + +YGQ
Sbjct: 1641 ESSSGQSSSYSQHGSGSGHSSGYGQHG-SRSGQSSRGERHGSSS-------RSSSRYGQH 1692
Query: 530 GVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPG 589
G G S Q P L S Q G G+ P
Sbjct: 1693 GSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSH--------GQHGSGSGRSSSRGPY 1744
Query: 590 KPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPF 649
+ ++ Q S + S +G + S SG SS DQ +
Sbjct: 1745 ESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQ-SSTFDQEGSSTGQS 1803
Query: 650 SPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPA 709
S H H S S GS G + SR S G GS S SS
Sbjct: 1804 SSHGQ-HGSGSSQSSSYGQQGSGSGQSPSRG---RHGSGSGHSSSYGQHGSGSGWSSSSG 1859
Query: 710 LSQSPMPQERGFMAGTQRNPQMAQYGPQQTGP----SMSPHPSPGGQMHAGISSFQQSNS 765
S Q GF + Q + Y +G S H S GQ G S S
Sbjct: 1860 RHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGEQHGSSSGS 1919
Query: 766 SGTYGPQMS---QYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGA 822
S +YG S Q G + S PS G G G S G G S G
Sbjct: 1920 SSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSSSRGP 1979
Query: 823 VPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAA 882
G S+G+ G+ S + S G Q G + A +++ Q
Sbjct: 1980 YESGSGHSSGL------GHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHG 2033
Query: 883 ANSAQS-----------------RQGS----FPGMNQSGLMASSSPYSQPMNNSSSLMNT 921
A+S QS RQGS PG Q G + SP S + S S ++
Sbjct: 2034 ASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSP-SYGRHGSGSGRSS 2092
Query: 922 QAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTT 981
+ + P + SS G + S S G G Q S+S +SS
Sbjct: 2093 SSGQHG--PGLGESSG--FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGER 2148
Query: 982 TGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGG 1041
G G R + +GS P+ G+ + G
Sbjct: 2149 HGSSSGSSSRYGQHGSGS----RQSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSG 2204
Query: 1042 LAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDT 1101
+ + + + + +V + S Y Q+ +G+ G T
Sbjct: 2205 SGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQH--------GST 2256
Query: 1102 KKQPKL--QPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGR 1159
Q Q S S G S+ S+S + G +P+ HG + G
Sbjct: 2257 SGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQ-QGSGSGQSPSRGRHGSGS----GH 2311
Query: 1160 SSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPG 1219
SS+ H S S SS + ++ + S + + G
Sbjct: 2312 SSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHG 2371
Query: 1220 SSEPFMTQGQMPNSSM--QDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEP-YGQQYP 1276
S ++G+ SS Y Q SG+ +LG GQ +G+ + P G+
Sbjct: 2372 SRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQ-----HGSGSGQSPSPSRGRHGS 2426
Query: 1277 GQGPPSGQPPYGGHQPGLYPQQP--NYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYN 1334
G G S PYG + P + H G+ ++ + Y SS +
Sbjct: 2427 GSGQSSSYSPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTH 2486
Query: 1335 QYGGSYSGPDRRPIQ-GQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNM 1393
GS SG Q G S G G Q+ G Q G S S G Q
Sbjct: 2487 GQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSG----SGQSPGHGQRG 2542
Query: 1394 WAARNDMPYPYQNRQGPG 1411
+R P R G G
Sbjct: 2543 SGSRQS---PSYGRHGSG 2557
Score = 90.1 bits (222), Expect = 2e-17
Identities = 232/988 (23%), Positives = 334/988 (33%), Gaps = 128/988 (12%)
Query: 15 GEAPAAPPHQQHHHHHHAHHHHH----HAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQ 70
G + H+ H A+ H H H + Q + F Q+ Q Q
Sbjct: 1749 GHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQ 1808
Query: 71 QQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS-KPGDEDD 129
S ++S G G G+ Q P + G S+ G G S + G
Sbjct: 1809 HGSGS-SQSSSYGQQGSGSGQ-SPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSG 1866
Query: 130 APPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG----- 184
G ++ G G+ + G + +GS++ +S
Sbjct: 1867 QSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGEQHGSSSGSSSSYGQH 1926
Query: 185 GPGGRAGPCFDQHG---GQQ-SPGMGMMHSASAAAA--GAPGSMDPLQNSHEGYPNSQCN 238
G G R QHG GQ SP G S S ++ G GS +S Y S
Sbjct: 1927 GSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSSSRGPY-ESGSG 1985
Query: 239 HYPGY----SRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
H G SR G G G G G S G G A + G A++ +++
Sbjct: 1986 HSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGASSGQSSSHGQH 2045
Query: 295 GGGG----GYGGSSAGYGVLSSPRQQGGGMMMGPGGG--GAASLSKAAAGSAAGGFQRFA 348
G G GYG +G G Q+G G P G G+ S +++G G +
Sbjct: 2046 GSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESS 2105
Query: 349 GQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGG 408
G H S + + + S + Y ++ S S S+ + +++G+++
Sbjct: 2106 GFGHHESSSGQSSSY---SQHGSGSGHSSGYGQHGSRSGQS---SRGERHGSSSGSSSRY 2159
Query: 409 QQAAAGMGLGKDMGAQYAAA--SPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMK 466
Q +G G Q + + SP+ S + S G G GRS
Sbjct: 2160 GQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSG 2219
Query: 467 RPQLYGM---GSNPHSQPQQSSPYPG-----GSYGPPGPQRYPIGIQGRTPGAMA--GMQ 516
++G GS S Q G G +G Q +G + G + G
Sbjct: 2220 HSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQH 2279
Query: 517 YPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQE 576
YGQQG SG GQ P S+ + Y S +
Sbjct: 2280 GSGSSQSSSYGQQG-SG---SGQSP--SRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGS 2333
Query: 577 GYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTS 636
G G S G +HE SS SG G+ + SS+ GS S
Sbjct: 2334 GSGQSS------GFGHHE----------SSSWQSSGYTQH---GSGSGHSSSYEQHGSRS 2374
Query: 637 SQGDQ------SNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPG 690
Q + S+ + S + H S S+ G S G ++ R G S G
Sbjct: 2375 GQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGS-----G 2429
Query: 691 SQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPG 750
P GS S SS +S G R+ Q + YG Q G S S H S
Sbjct: 2430 QSSSYSPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYG--QHGSS-SGHSSTH 2486
Query: 751 GQMHAGISSFQQSNSSGTYGP---QMSQYGPQGN-------YSRPPAYSGV--------- 791
GQ H S QS+S G +G Q S +G G+ Y R + SG
Sbjct: 2487 GQ-HGSTSG--QSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGS 2543
Query: 792 ---PSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPS 848
S SY G G G S+++ HG G + G G S+ Q+ + + S S
Sbjct: 2544 GSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSG---FGHHESSSGQSSSYSQHGSGSGHS 2600
Query: 849 SPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQS----RQGSFPGMNQ------ 898
S G Q G + + +++ Q + S QS RQGS G +
Sbjct: 2601 S-GYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHG 2659
Query: 899 SGLMASSSPYSQPMNNSSSLMNTQAPPY 926
SGL SS S + S S ++ PY
Sbjct: 2660 SGLGHSS---SHGQHGSGSGRSSSRGPY 2684
Score = 89.0 bits (219), Expect = 5e-17
Identities = 234/1041 (22%), Positives = 345/1041 (33%), Gaps = 186/1041 (17%)
Query: 38 HAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDME 97
H+ L H + Q + + Q Q S + G G
Sbjct: 1516 HSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHG----STSGQSSSCGQHGASSGQSSS 1571
Query: 98 QPQHGGAKDSAAG------GQADPPG----------PPLLSKPGDEDDAPPKMGEPAGGR 141
QHG ++G G PG P + G G+ G
Sbjct: 1572 HGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGL 1631
Query: 142 YEHPGLG---ALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG--------GPGGRA 190
E G G + Q + G G G ++ YG SG G R+
Sbjct: 1632 GESSGFGHHESSSGQSSSYSQHGSGSG------HSSGYGQHGSRSGQSSRGERHGSSSRS 1685
Query: 191 GPCFDQHGGQ---------------QSP-----GMGMMHSAS----AAAAGAPGSMDPLQ 226
+ QHG QSP G G+ HS+S + +G S P +
Sbjct: 1686 SSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYE 1745
Query: 227 N-----SHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGG--------GGGGGGAGA 273
+ S G S H YS+ G+G G G G + G G G + +
Sbjct: 1746 SRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSS 1805
Query: 274 GGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGG--GAAS 331
G + +++ +G G G +G G SS Q G G G G+ S
Sbjct: 1806 HGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGS 1865
Query: 332 LSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPP 391
+ G + +G QH SG+ + SY ++ S S
Sbjct: 1866 GQSSGFGHHESSSWQSSGYTQHGSGS----------------GHSSSYEQHGSRSGQS-- 1907
Query: 392 PSQPQSQAAAAGAAAGGQQAAAG--MGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPG 449
S+ + +++G+++ Q +G LG + SP+ + + S S
Sbjct: 1908 -SRGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGP 1966
Query: 450 PTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTP 509
G S P G+G S+ QSS Y G +G G G
Sbjct: 1967 YGSGSGWSSSRGPYESGSGHSSGLGHR-ESRSGQSSGY--GQHGSSSGHSSTHGQHGSAS 2023
Query: 510 G--AMAGMQYPQQQMPPQYGQQGV-----SGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQ 562
G + G +GQ G SGY +QG S P
Sbjct: 2024 GQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQS---------------PGH 2068
Query: 563 SQQRYQPQQDMSQEGYGTRSQPPLAPGK--PNHEDLNLIQQERPSSLPDLSGSIDDLPTG 620
Q+ +Q S +G+ S + G+ P + + SS S S +G
Sbjct: 2069 GQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGSGSG 2128
Query: 621 TEATLSSAVSASGSTSSQGDQ---SNPAQSPFSPHASPHLSSIPGGPSPSPVG-SPV-GS 675
+ S SG SS+G++ S+ + S + H S S G S G SP G
Sbjct: 2129 HSSGYGQHGSRSGQ-SSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPSRGR 2187
Query: 676 NQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG-FMAGTQRNPQMAQY 734
+ S SG S GS GS SS P S+S G +G+ + +Q+
Sbjct: 2188 HGSGSGHSSSHGQHGS-------GSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQH 2240
Query: 735 GPQQTG-PSMSPHPSPGGQMHAGISSFQQSNSS----------GTYGPQMSQYGPQGNYS 783
G S H S GQ S+F Q SS G+ Q S YG QG+ S
Sbjct: 2241 GSGSGHFCSQGQHGSTSGQS----STFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGS 2296
Query: 784 -------RPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNR 836
R + SG S+SY G G G S+++ HG G Q G G S+ Q+
Sbjct: 2297 GQSPSRGRHGSGSG-HSSSYGQHGSGSGWSSSSGRHGSGSGQSSG---FGHHESSSWQSS 2352
Query: 837 PFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGM 896
+ + S SS +Q G G + + ++ + + + SRQ G
Sbjct: 2353 GYTQHGSGSGHSS--SYEQHGSRSG--QSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQ 2408
Query: 897 NQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLP 956
+ SG S SP S+ + S S ++ PY + G + P ES
Sbjct: 2409 HGSGSGQSPSP-SRGRHGSGSGQSSSYSPY----------GSGSGWSSSRGPYES----- 2452
Query: 957 LKADGKEEGTPQPESKSKKSS 977
G G ES+S +SS
Sbjct: 2453 --GSGHSSGLGHRESRSGQSS 2471
Score = 84.3 bits (207), Expect = 1e-15
Identities = 191/846 (22%), Positives = 277/846 (32%), Gaps = 138/846 (16%)
Query: 74 HPISNNNSLGGAGGGAPQPGPDMEQPQHGGA--------KDSAAGGQADPPGPPLLSKPG 125
H S + G G G QHG A + A+ GQ+ G + G
Sbjct: 1992 HRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGASSGQSSSHG-----QHG 2046
Query: 126 DEDDAPPKMGEPAGGRYEHPGLGALGT---QQPPVAVPGGGGGPAAVPE----------- 171
G G + PG G G+ Q P G G G ++
Sbjct: 2047 SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSG 2106
Query: 172 FNNYYGSAAPASG----GPGGRAGPCFDQHG---GQQSPGMGMMHSASAAAAGAPGSMDP 224
F ++ S+ +S G G + QHG GQ S G S+ +++
Sbjct: 2107 FGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGS 2166
Query: 225 LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAV--- 281
Q+S G S H P R G+G G G G G G +G +V
Sbjct: 2167 RQSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQ 2226
Query: 282 --AAAAAAAAAAAGGGGGG-----GYGGSSAGY-----------GVLSSPRQQGGGMMMG 323
+ + ++A + G G G G GS++G G SS Q G G
Sbjct: 2227 HESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQS 2286
Query: 324 P-----GGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYG-- 376
G G S S+ GS +G + GQ+ SG + + + S S +G
Sbjct: 2287 SSYGQQGSGSGQSPSRGRHGSGSGHSSSY-GQHGSGSGWSSSSGRH-GSGSGQSSGFGHH 2344
Query: 377 -------GSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAAS 429
Y ++ S S S + + +G ++ G++ + G G + +
Sbjct: 2345 ESSSWQSSGYTQHGSGSGHS---SSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSR 2401
Query: 430 PAWAAAQQRSHPAMSP----GTPGPTMGRSQ-----GSPMDPMVMKRPQLYGMGSNP--- 477
+ Q S SP G G G+S GS + P G G +
Sbjct: 2402 QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSGHSSGLG 2461
Query: 478 --HSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPG--AMAGMQYPQQQMPPQYGQQGV-- 531
S+ QSS Y G +G G G T G + G +GQ G
Sbjct: 2462 HRESRSGQSSGY--GQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGS 2519
Query: 532 ---SGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAP 588
SGY +QG S P Q+ +Q S +G+ S +
Sbjct: 2520 SQSSGYGRQGSGSGQS---------------PGHGQRGSGSRQSPSYGRHGSGSGRSSSS 2564
Query: 589 GKPNHEDLNLIQQERPSSLPDLSG-SIDDLPTGTEATLSSAVSASGSTSSQGDQSNPA-- 645
G + S L + SG + +G ++ S S SG +S G + +
Sbjct: 2565 G------------QHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQ 2612
Query: 646 QSPFSPHASPHLSSIPGGP--SPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSE 703
S H S SS G S S S G S SG GS + Q
Sbjct: 2613 SSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHG 2672
Query: 704 SSSHPALSQSPMPQERGFMA-------GTQRNPQMAQYGPQQTG-PSMSPHPSPGGQMHA 755
S S + S+ P G + G+ + +Q+G S H S GQ
Sbjct: 2673 SGSGRSSSRGPYESRLGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSST 2732
Query: 756 GISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQG 815
+ S +YG + S Y R A SG S S+ G G G S++ HG G
Sbjct: 2733 FDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSG-QSLSHGRHGSGSGQSSSYGQHGSG 2791
Query: 816 PSQPCG 821
Q G
Sbjct: 2792 SGQSSG 2797
Score = 82.0 bits (201), Expect = 6e-15
Identities = 199/845 (23%), Positives = 286/845 (33%), Gaps = 86/845 (10%)
Query: 176 YGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNS 235
YG S GR G C G QSP G S S ++ N G +
Sbjct: 179 YGEQNSDSHQSSGR-GQCGS--GSGQSPNYGQHGSGSGQSSS---------NDTHGSGSG 226
Query: 236 QCNHYPGY-SRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
Q + + + S G G G G G S G G G+ +G + G +++ ++++ G
Sbjct: 227 QSSGFSQHKSSSGQSSGYSQHGSGSGHS-SGYGQHGSRSGQSSRGERHRSSSGSSSSYGQ 285
Query: 295 GGGG---GYGGSSAGYGVLSSPRQ----QGGGMMMGPGGGGAASLSKAAAGSAAGGFQRF 347
G G G G G SP G G G G+ S + G G +
Sbjct: 286 HGSGSRQSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHGSGSSYSYSRGHYESGSGQT 345
Query: 348 AGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAG 407
+G QH SG+ + S + S ++ S S Q ++ ++ G
Sbjct: 346 SGFGQHESGSGQSSGY---SKHGSGSGHSSSQGQHGSTSGQASSSGQ-HGSSSRQSSSYG 401
Query: 408 GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKR 467
++A+ G+ + + SP S + S G G GRS S P V
Sbjct: 402 QHESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSSGQHGTGFGRSSSS--GPYVSGS 459
Query: 468 PQLYGMGSNPHSQPQQSSPYPGGS-------YGPPGPQRYPIGIQGRTPGAMAGMQYPQQ 520
G G + S S GS +G G R +G G+ AG
Sbjct: 460 GYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHG-SRSGQSSRGERQGSSAGSS---- 514
Query: 521 QMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMS--QEGY 578
YGQ G G + S Q P PS+ + +Q S GY
Sbjct: 515 ---SSYGQHGSGSRQSLGHSRHGSGSGQSPS--------PSRGRHESGSRQSSSYGPHGY 563
Query: 579 G---TRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGST 635
G + S+ P G + L QE S G +G +T S SG +
Sbjct: 564 GSGRSSSRGPYESGSGHSSGLG--HQESRSGQSSGYGQ-HGSSSGHSSTHGQHGSTSGQS 620
Query: 636 SSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPP 695
SS G A S S H S GS G + SR S S
Sbjct: 621 SSCGQHG--ATSGQSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDFG-HSSSYGQ 677
Query: 696 QPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPS-MSPHPSPGGQMH 754
GS SS+ P S S G +G+ ++ +Q+G + S H S GQ
Sbjct: 678 HGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSGQSS 737
Query: 755 AGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQ 814
S S +YG S + R + SG S S G G S+++ HG
Sbjct: 738 RSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSG-HSPSRVRHGSSSGHSSSHGQHGS 796
Query: 815 GP--SQPCGAVPLGRMPSAGM-QNRPFPGNMSSMTPSSPG-MSQQGGPGMGPPMPTV--- 867
G S CG G ++G Q+ G S S+ G S QG G +
Sbjct: 797 GTSCSSSCGHYESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGSTSGQSSSSGQ 856
Query: 868 --NRKAQEAAAAVMQAAANSAQSR------QGSFPGMNQSGLMASSSPYSQPMNNSSSLM 919
+ Q ++ ++A++ A R G PG Q G + SP S + S S
Sbjct: 857 HDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGSGQSP-SYGRHGSGSGR 915
Query: 920 NTQAPPYSMAPAMVNSSAASVGLADMMSPGESK-LPLPLKADGKEEGTPQPESKSKKSSS 978
++ + + + S S G S G+S G Q S+S +SS
Sbjct: 916 SSSSGRHG------SGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGSRSGQSSR 969
Query: 979 STTTG 983
S G
Sbjct: 970 SEQHG 974
Score = 79.7 bits (195), Expect = 3e-14
Identities = 169/744 (22%), Positives = 246/744 (33%), Gaps = 105/744 (14%)
Query: 100 QHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAV 159
QHG ++ G+ + G + + G+ G + G G G+
Sbjct: 2135 QHGSRSGQSSRGE----------RHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPS 2184
Query: 160 PGGGGGPAAVPEFNNYYGSAAPASGGPG---GRAG--PCFDQH---GGQQSP----GMGM 207
G G + + +GS + S G R+G F QH G S G G
Sbjct: 2185 RGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGS 2244
Query: 208 MHSASAAAAGAPGSMDPL---QNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGG 264
H S G+ + S G +S H G S+ + G G G G G
Sbjct: 2245 GHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGR 2304
Query: 265 GGGGGGA----GAGGAGAGAVAAAAAAAAAAAGGGGGG----------GYGGSSAGYGVL 310
G G G G G+G+G +++ + + G G GY +G G
Sbjct: 2305 HGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHS 2364
Query: 311 SSPRQQGGGMMMGPGGG--GAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSP 368
SS Q G G G++S S ++ G G ++ G QH SG+ SP
Sbjct: 2365 SSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQ-------SP 2417
Query: 369 SPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAA 428
SP +G + SS S P +++ G G ++G+G + Q
Sbjct: 2418 SPSRGRHGSGSGQSSSYS----PYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQ---- 2469
Query: 429 SPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYP 488
S + S + + G G T G+S G + S Q SS
Sbjct: 2470 SSGYGQHGSSSGHSSTHGQHGSTSGQSSSC---------------GQHGASSGQSSSH-- 2512
Query: 489 GGSYGPPGPQRYPIGIQGRTPGAMAG--MQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQ 546
G +G Q G QG G G + + P YG+ G G S
Sbjct: 2513 -GQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHG------SGSGRSSSSG 2565
Query: 547 PQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSS 606
L + + +S Q S +G+ S G+ + ER S
Sbjct: 2566 QHGSGLGESSGFGHHESSSG----QSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGS 2621
Query: 607 LPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPA----QSPFSPHASPHLSSIPG 662
S +G+ + SGS S + + S H S S
Sbjct: 2622 SSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSR 2681
Query: 663 GPSPSPVG--SPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG 720
GP S +G S G ++S SG S S GS Q S+S QS + G
Sbjct: 2682 GPYESRLGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTS----GQSSTFDQEG 2737
Query: 721 FMAGTQRNPQMAQYGPQQTGPSMSP----HPSPGGQMHAGISSFQQSNSSGTYGPQMSQY 776
G Q + YG + +G S S H + GQ + S S +YG S
Sbjct: 2738 SSTG-----QSSSYGHRGSGSSQSSGYGRHGAGSGQSLSHGRHGSGSGQSSSYGQHGSGS 2792
Query: 777 GPQGNYSRPPAYSGVPSASYSGPG 800
G YS+ + SG SY G
Sbjct: 2793 GQSSGYSQHGSGSGQDGYSYCKGG 2816
Score = 75.9 bits (185), Expect = 4e-13
Identities = 152/703 (21%), Positives = 222/703 (31%), Gaps = 95/703 (13%)
Query: 234 NSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAG 293
+ Q N Y G S G G G G G G G+G+ +++ +G
Sbjct: 166 SGQHNSYSGQSSSYGEQNSDSHQSSGRGQCGSGSGQSPNYGQHGSGS-GQSSSNDTHGSG 224
Query: 294 GGGGGGY------GGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRF 347
G G+ G S+GY S G G G G G+ S +
Sbjct: 225 SGQSSGFSQHKSSSGQSSGY----SQHGSGSGHSSGYGQHGSRSGQSSRGERHRSSSGSS 280
Query: 348 AGQNQHPSGATPTLNQ------LLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAA 401
+ QH SG+ +L SPS + G S S+ S + +
Sbjct: 281 SSYGQHGSGSRQSLGHGRQGSGSRQSPSHVRHGSG------SGHSSSHGQHGSGSSYSYS 334
Query: 402 AGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMD 461
G G +G G + Q S ++ S + S G G T G++ S
Sbjct: 335 RGHYESGSGQTSGFGQHESGSGQ----SSGYSKHGSGSGHSSSQGQHGSTSGQASSSGQH 390
Query: 462 PMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQ 521
++ YG + + GS G++PG G +
Sbjct: 391 GSSSRQSSSYGQHESASRHSSGRGQHSSGS--------------GQSPG--HGQRGSGSG 434
Query: 522 MPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTR 581
P GQ G PY S + Y + +G+
Sbjct: 435 QSPSSGQHGTGFGRSSSSGPYVS----------GSGYSSGFGHHESSSEHSSGYTQHGSG 484
Query: 582 SQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSS---- 637
S G+ + ER S S S +G+ +L + SGS S
Sbjct: 485 SGHSSGHGQHGSRSGQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQSPSPS 544
Query: 638 --QGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVG--SPVGSNQSRSGPISPASIPGSQM 693
+ + + S + PH S GP S G S +G +SRSG S GS
Sbjct: 545 RGRHESGSRQSSSYGPHGYGSGRSSSRGPYESGSGHSSGLGHQESRSGQSSGYGQHGSS- 603
Query: 694 PPQPPGSQSESSSHPALS-QSPMPQERGFMAGTQR--------NPQMAQYGPQQTGPSMS 744
G S H + S QS + G +G + Q ++YG Q +G S
Sbjct: 604 ----SGHSSTHGQHGSTSGQSSSCGQHGATSGQSSSHGQHGSGSSQSSRYGQQGSGSGQS 659
Query: 745 PHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMG 804
P G SS+ Q S + S GP G+ S +S G G G
Sbjct: 660 PSRGRHGSDFGHSSSYGQHGSGSGWS---SSNGPHGSVS--------GQSSGFGHKSGSG 708
Query: 805 ISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQ-GGPGMGPP 863
S+ HG G S G G +R + S SS G+S G G G
Sbjct: 709 QSSGYSQHGSGSSHSSGYRKHG--------SRSGQSSRSEQHGSSSGLSSSYGQHGSGSH 760
Query: 864 MPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSS 906
+ + + + + + S S G + SG SSS
Sbjct: 761 QSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCSSS 803
Score = 58.9 bits (141), Expect = 5e-08
Identities = 199/891 (22%), Positives = 292/891 (32%), Gaps = 134/891 (15%)
Query: 620 GTEATLSSAVSASGSTSSQGDQ------SNPAQSPFSPHASPHLSSIPGGPSPSPVGSPV 673
G+ + SS GS S Q + S+ + S + H S S+ G S
Sbjct: 248 GSGSGHSSGYGQHGSRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQGS------ 301
Query: 674 GSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQ 733
GS QS S + S G GS S S +S Q GF + Q +
Sbjct: 302 GSRQSPSH-VRHGSGSGHSSSHGQHGSGSSYSYSRGHYESGSGQTSGFGQHESGSGQSSG 360
Query: 734 YGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGP---QMSQYGPQGNYSRPPAYSG 790
Y +G S H S GQ H S Q++SSG +G Q S YG + SR + G
Sbjct: 361 YSKHGSG---SGHSSSQGQ-HGSTSG--QASSSGQHGSSSRQSSSYGQHESASRHSSGRG 414
Query: 791 VPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFP---------GN 841
S+ SG PG G + GQ PS GR S+G P+ G+
Sbjct: 415 QHSSG-SGQSPGHGQRGSGS--GQSPSSGQHGTGFGRSSSSG----PYVSGSGYSSGFGH 467
Query: 842 MSSMTPSSPGMSQQGGP----------GMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQG 891
S + S G +Q G G + + +A + + + SRQ
Sbjct: 468 HESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAGSSSSYGQHGSGSRQS 527
Query: 892 SFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSS---------AASVGL 942
+ SG S SP S+ + S S ++ P+ +S ++ +G
Sbjct: 528 LGHSRHGSGSGQSPSP-SRGRHESGSRQSSSYGPHGYGSGRSSSRGPYESGSGHSSGLGH 586
Query: 943 ADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWV 1002
+ S S + G Q S S +SSS G + G
Sbjct: 587 QESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGATSGQSSSHGQHGSGSSQS 646
Query: 1003 DRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGT 1062
RY ++GS P+ G+ D + G + N ++ + G
Sbjct: 647 SRY----GQQGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWSSSNGPHGSVSGQSS-GF 701
Query: 1063 SSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSG-----S 1117
+ S Y Q+ G G Q ++SG
Sbjct: 702 GHKSGSGQSSGYSQH--------GSGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYG 753
Query: 1118 LQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSF 1177
G + QS+G G +P+ HG + G SS+ H + S S
Sbjct: 754 QHGSGSHQSSGHGRQGSGSGH----SPSRVRHGSSS----GHSSSHGQHGSGTSCSSSC- 804
Query: 1178 PKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQD 1237
Y+ G G+ + G + +S F +QG+ ++S
Sbjct: 805 ---------GHYESGSGQASGFGQHESGSGQ----GYSQHGSASGHFSSQGRHGSTS--- 848
Query: 1238 MYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQ 1297
QS S + GQ YG H G+ G G SGQ P G + Q
Sbjct: 849 --GQSSSSGQHDSSSGQSSS--YGQHESASHHASGRGRHGSG--SGQSPGHGQRGSGSGQ 902
Query: 1298 QPNYKRH--------MDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYG------------ 1337
P+Y RH G +G + + G + + SS Q Y Q+G
Sbjct: 903 SPSYGRHGSGSGRSSSSGRHGSGSGQSSG--FGHKSSSGQSSGYTQHGSGSGHSSSYEQH 960
Query: 1338 GSYSGPDRRPIQ-GQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAA 1396
GS SG R Q G S G G Q+ G Q G QS S + +
Sbjct: 961 GSRSGQSSRSEQHGSSSGSSSSYGQHGSGSRQSLG-HGQHGSGSGQSPSPSRGRHGSGSG 1019
Query: 1397 RNDMPYPYQNRQGPGGPTQAPPY-PGMNRTDDMMVPDQRINHESQWPSHVS 1446
++ PY R G G + PY G + + + R S + H S
Sbjct: 1020 QSSSYGPY--RSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGS 1068
Score = 49.7 bits (117), Expect = 3e-05
Identities = 84/399 (21%), Positives = 128/399 (32%), Gaps = 67/399 (16%)
Query: 24 QQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLG 83
Q + H H + H H Q + Q Q Q S+
Sbjct: 2469 QSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQ 2528
Query: 84 GAGGG-APQPGP----DMEQPQHG----GAKDSAAGGQADPPGPPLLSKPG-----DEDD 129
G+G G +P G + P +G G+ S++ GQ G L G
Sbjct: 2529 GSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQH---GSGLGESSGFGHHESSSG 2585
Query: 130 APPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGR 189
+ G G G G++ + G + +GS + S G G R
Sbjct: 2586 QSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHG-R 2644
Query: 190 AGPCFDQHGGQQSPGMGMMHSAS----AAAAGAPGSMDPLQN-----SHEGYPNSQCNHY 240
G Q + G G+ HS+S + +G S P ++ S G S H
Sbjct: 2645 QGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRLGHSSVFGQHESGSGHS 2704
Query: 241 PGYSRPGAGGG--------GGGGGGG------GGGSGGGGGGGGAGAGGAGAGAVAAAAA 286
YS+ G+G G G G G +G G G+G + + A
Sbjct: 2705 SAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGA 2764
Query: 287 AAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQR 346
+ + G G G S+ YG G G G ++ S+ +GS G+
Sbjct: 2765 GSGQSLSHGRHGSGSGQSSSYG------------QHGSGSGQSSGYSQHGSGSGQDGYSY 2812
Query: 347 FAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSP 385
G + H G++ SY S+P +SP
Sbjct: 2813 CKGGSNHDGGSS--------------GSYFLSFPSSTSP 2837
Score = 43.9 bits (102), Expect = 0.002
Identities = 81/328 (24%), Positives = 110/328 (33%), Gaps = 59/328 (17%)
Query: 1113 ANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDV 1172
++S G + QS G G + P+P+ HG + G+SS+ S + S
Sbjct: 2390 SSSYGQHGSGSRQSLGHGQHGSGSG--QSPSPSRGRHGSGS----GQSSSYSPYGSGSGW 2443
Query: 1173 SDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPN 1232
S S PY+ G +G E G + SS T GQ +
Sbjct: 2444 SSS----------RGPYESGSGHSSGLGHR--ESRSGQSSGYGQHGSSSGHSSTHGQHGS 2491
Query: 1233 SSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQP 1292
+S QS S GQ S + YG+Q G SGQ P G +
Sbjct: 2492 TS-----GQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQ----GSGSGQSPGHGQRG 2542
Query: 1293 GLYPQQPNYKRHMDGMYGPPAKRHEGD-------MYNMQYSSQQQEMYNQYG-------- 1337
Q P+Y RH G + G + + SS Q Y+Q+G
Sbjct: 2543 SGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSG 2602
Query: 1338 ----GSYSGPDRR-PIQGQYPYPYSRERMQGPGQIQTHGIPPQ-----------MMGGPL 1381
GS SG R G S G G Q+ G Q G L
Sbjct: 2603 YGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGL 2662
Query: 1382 QSSSSEGPQQNMWAARNDMPYPYQNRQG 1409
SSS G Q + R+ PY++R G
Sbjct: 2663 GHSSSHG-QHGSGSGRSSSRGPYESRLG 2689
Score = 31.6 bits (70), Expect = 8.9
Identities = 63/270 (23%), Positives = 85/270 (31%), Gaps = 29/270 (10%)
Query: 1108 QPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQG-GRSSTISVH 1166
Q P+ GS G + T + + G + + + G G G SS H
Sbjct: 201 QSPNYGQHGSGSGQSSSNDTHGSGSGQSSGFSQHKSSSGQSSGYSQHGSGSGHSSGYGQH 260
Query: 1167 DPFSDVSDSSFPKRNSMTPNAPYQQ---GMSMPDVMGRMPYEPNKDPFGGMRKVPGS--S 1221
S S R+S ++ Y Q G GR + P +R GS S
Sbjct: 261 GSRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQGSGSRQSP-SHVRHGSGSGHS 319
Query: 1222 EPFMTQGQMPNSSMQDMYNQSPSGAMSNLGM-----GQRQQFPYGASYDRRHEPYGQQ-- 1274
G + S + +S SG S G GQ + S GQ
Sbjct: 320 SSHGQHGSGSSYSYSRGHYESGSGQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGS 379
Query: 1275 YPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYN 1334
GQ SGQ Q Y Q + RH G +H S Q +
Sbjct: 380 TSGQASSSGQHGSSSRQSSSYGQHESASRHSSG-----RGQHSS-------GSGQSPGHG 427
Query: 1335 QYGGSYSGPDRRPIQGQYPYPYSRERMQGP 1364
Q G SG + P GQ+ + R GP
Sbjct: 428 QRG---SGSGQSPSSGQHGTGFGRSSSSGP 454
>gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein [Homo
sapiens]
Length = 593
Score = 104 bits (260), Expect = 8e-22
Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 14/197 (7%)
Query: 941 GLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKL 1000
G+ ++ E P P G PQ + T E+ ++YEL +P+RK
Sbjct: 187 GVPRVLGGQERPGPGPAHPGGAAHVAPQLQPPDH---GDWTYEEQFKQLYELDGDPKRKE 243
Query: 1001 WVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNV 1060
++D +FM++RG+PV+ +P + K+ LDLF LYV V E GGL +V K WRE+ LN+
Sbjct: 244 FLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNL 303
Query: 1061 GTS-SSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQP--------KLQPPS 1111
TS +SAA +L+ QY++YL+ +EC+ +RG P E+ + D+ ++ L S
Sbjct: 304 PTSITSAAFTLRTQYMKYLYPYECE-KRGLSNPNELQAAIDSNRREGRRQSFGGSLFAYS 362
Query: 1112 PANS-GSLQGPQTPQST 1127
P + G L P+ P S+
Sbjct: 363 PGGAHGMLSSPKLPVSS 379
Score = 40.0 bits (92), Expect = 0.025
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAA 291
P P + GGGGGGG S GG GG G G AG + + + +
Sbjct: 538 PPAPTPTSAPNKGGGGGGGSSSNAGGRGGNTGTSGGQAGPAGLSTPSTSTS 588
Score = 37.0 bits (84), Expect = 0.21
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 1633 GDPSQKALDHNAARKDDSQSLADDSG-----KEEEDAECIDDDEEDEEDEEEDSEKTESD 1687
G P ++ + +A D +EEE E + +DEE+EE++ ED E+ E +
Sbjct: 97 GTPGSPGRGREGPGEEHFEDMASDEDMKPKWEEEEMEEDLGEDEEEEEEDYEDEEEEEDE 156
Query: 1688 E---KSSIALTAPDAAADPKEKPKQASKFDKLP 1717
E A A K +P QA + D +P
Sbjct: 157 EGLGPPGPASLGTTALFPRKAQPPQAFRGDGVP 189
Score = 33.9 bits (76), Expect = 1.8
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 59 QQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSA-AGGQADPPG 117
Q+QQ+ +Q+ + +QQ P + G AP + E + A+ +A A +A G
Sbjct: 12 QRQQRARQELEARQQLPPDPPAAPPGRARAAPDEDREPESARMQRAQMAALAAMRAAAAG 71
Query: 118 PPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQP 155
+ PG +D PP E R PG G + P
Sbjct: 72 LGHPASPGGSEDGPPGSEEEDAAREGTPGSPGRGREGP 109
>gi|62122917 filaggrin family member 2 [Homo sapiens]
Length = 2391
Score = 102 bits (254), Expect = 4e-21
Identities = 226/976 (23%), Positives = 308/976 (31%), Gaps = 146/976 (14%)
Query: 102 GGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEH-PGLGALGTQQPPVAVP 160
G +GGQ G P S P + + G G+ ++ G G+ Q
Sbjct: 324 GQGHGCVSGGQPSGCGQPE-SNPCSQSYSQRGYGARENGQPQNCGGQWRTGSSQSSCCGQ 382
Query: 161 GGGGGPAAVPEFNNYYGSAAPASG-------------GPGGRAGPCFDQHGG--QQSPGM 205
G GG + + YGS S G G F+QHG QS G
Sbjct: 383 YGSGGSQSCSNGQHEYGSCGRFSNSSSSNEFSKCDQYGSGSSQSTSFEQHGTGLSQSSGF 442
Query: 206 GMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGG-GGGGGGSGG 264
S G HE S + GY + G+ G G G G GSG
Sbjct: 443 EQHVCGSGQTCG----------QHE----STSSQSLGYDQHGSSSGKTSGFGQHGSGSGQ 488
Query: 265 GGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV------LSSPRQQGG 318
G G G+G + + + ++G G G G S+G+G SS Q G
Sbjct: 489 SSGFGQCGSGSGQSSGFGQHGSVSGQSSGFGQHGSVSGQSSGFGQHESRSRQSSYGQHGS 548
Query: 319 GMMMGPGGG-------------GAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
G G G G S G G + +G QH SG+ Q
Sbjct: 549 GSSQSSGYGQYGSRETSGFGQHGLGSGQSTGFGQYGSGSGQSSGFGQHGSGS----GQSS 604
Query: 366 TSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ--------AAAAGAAAGGQQAAAGMGL 417
RS SY ++SS S+ Q S+ + + + G Q +G G
Sbjct: 605 GFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQ 664
Query: 418 GKDMGAQYAAASPAWAAAQQRSHPAMSP-GTPGPTMGRSQGSPMDPMVMKRPQLYGMGSN 476
G + + + Q S S G G G SQ S Q G G +
Sbjct: 665 SSGFGQHVSGSGQSSGFGQHESRSGHSSYGQHG--FGSSQSSGYGQHGSSSGQTSGFGQH 722
Query: 477 PHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGM-QYPQQQMPPQYGQQG----- 530
S Q SS G +G Q G G G +G Q+ + YGQ
Sbjct: 723 ELSSGQSSS---FGQHGSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQ 779
Query: 531 VSGYCQQGQQ-------------------PYYSQQPQP----PHLPPQAQYLPSQSQQRY 567
SGY Q G + Y S Q H Q +
Sbjct: 780 SSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQSAGFGQHGSGSGQSSGFGQHESR 839
Query: 568 QPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSS 627
Q Q G G+ + + Q R SS +G +
Sbjct: 840 SHQSSYGQHGSGSSQSSGYGQHGSSSGQTSGFGQHRSSSGQYSGFGQHGSGSGQSSGFGQ 899
Query: 628 AVSASGSTSSQGD-QSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPA 686
+ SG S G +S QS + H S S G S G G Q RSG
Sbjct: 900 HGTGSGQYSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTFGFGQHRSG----- 954
Query: 687 SIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPH 746
G GS S SS +S + GF R+ Q + YG +G S S
Sbjct: 955 --SGQSSGFGQHGSGSGQSSGFGQHESGSGKSSGFGQHESRSSQ-SNYGQHGSGSSQSSG 1011
Query: 747 PSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGIS 806
G + F Q SS Q+G + S G S SG G S
Sbjct: 1012 YGQHGSSSGQTTGFGQHRSSSGQYSGFGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESRS 1071
Query: 807 ANNQ--MHGQGPSQPCGAVPLGR---MPSAGMQNRPFPGNMSSMTPSSPGMSQ-----QG 856
+ HG G SQ G G S Q+RP G S G Q Q
Sbjct: 1072 RQSSYGQHGSGSSQSSGYGQHGSNSGQTSGFGQHRPGSGQSSGFGQYGSGSGQSSGFGQH 1131
Query: 857 GPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSS 916
G G G + + ++ Q S+QS S G ++SG ++S + Q ++ S
Sbjct: 1132 GSGTGKSSGFAQHEYRSGQSSYGQHGTGSSQS---SGCGQHESGSGPTTS-FGQHVSGSD 1187
Query: 917 SLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKS 976
+ +S + ++ S S G S G+ G Q ES+ +S
Sbjct: 1188 N--------FSSSGQHISDSGQSTGFGQYGS-----------GSGQSTGLGQGESQQVES 1228
Query: 977 SSS------TTTGEKI 986
S+ TT G+ I
Sbjct: 1229 GSTVHGRQETTHGQTI 1244
Score = 91.3 bits (225), Expect = 9e-18
Identities = 207/913 (22%), Positives = 292/913 (31%), Gaps = 134/913 (14%)
Query: 60 QQQQQQQQQQQQQQHPISNNNSLG--------GAGGGAPQPGPDMEQP----QHGGAKDS 107
Q + Q QH S+ + G G G Q G Q QHG
Sbjct: 455 QHESTSSQSLGYDQHGSSSGKTSGFGQHGSGSGQSSGFGQCGSGSGQSSGFGQHGSVSGQ 514
Query: 108 AAG-GQ-ADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGG 165
++G GQ G + G+ G + G G G+++ G G
Sbjct: 515 SSGFGQHGSVSGQSSGFGQHESRSRQSSYGQHGSGSSQSSGYGQYGSRETS-GFGQHGLG 573
Query: 166 PAAVPEFNNYYGSAAPASG----GPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGS 221
F Y + +SG G G F QH + HS+ ++ + G
Sbjct: 574 SGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQSSGYGQ 633
Query: 222 MDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAV 281
Q S G S + G+ + G+G G G G G G G +G +
Sbjct: 634 HGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQSSGFGQHVSGSGQSSGFGQHESRSGHSSY 693
Query: 282 AAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA 341
++ ++G G G G ++G+G + G G G+ S + G
Sbjct: 694 GQHGFGSSQSSGYGQHGSSSGQTSGFG----QHELSSGQSSSFGQHGSGSGQSSGFGQHG 749
Query: 342 GGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAA 401
G + +G QH S + + +S S YG +S S SQ+
Sbjct: 750 SGSGQSSGFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGS---SQSTG 806
Query: 402 AGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMD 461
G G +AG G Q S + + RSH + S G G G SQ S
Sbjct: 807 FGQYGSGSGQSAGFGQHGSGSGQ----SSGFGQHESRSHQS-SYGQHGS--GSSQSSGYG 859
Query: 462 PMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGM-QYPQQ 520
Q G G + S Q S G +G Q G G G +G Q+ +
Sbjct: 860 QHGSSSGQTSGFGQHRSSSGQYSG---FGQHGSGSGQSSGFGQHGTGSGQYSGFGQHESR 916
Query: 521 QMPPQYGQQGV-----SGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQ 575
YGQ G SGY Q G S S Q + Q S
Sbjct: 917 SHQSSYGQHGSGSSQSSGYGQHG----------------------SSSGQTFGFGQHRSG 954
Query: 576 EGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGST 635
G + G H SGS G + S SG +
Sbjct: 955 SGQSS--------GFGQHG----------------SGS------GQSSGFGQHESGSGKS 984
Query: 636 SSQGD-QSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMP 694
S G +S +QS + H S S G S G G Q RS G
Sbjct: 985 SGFGQHESRSSQSNYGQHGSGSSQSSGYGQHGSSSGQTTGFGQHRSSS-------GQYSG 1037
Query: 695 PQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSP----HPSPG 750
GS S+ SS + Q GF R+ Q + YG +G S S H S
Sbjct: 1038 FGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESRSRQ-SSYGQHGSGSSQSSGYGQHGSNS 1096
Query: 751 GQMHAGISSFQ----QSNSSGTYGP---QMSQYGPQGN-------YSRPPAYSGVPSASY 796
GQ +G + QS+ G YG Q S +G G+ +++ SG S
Sbjct: 1097 GQT-SGFGQHRPGSGQSSGFGQYGSGSGQSSGFGQHGSGTGKSSGFAQHEYRSGQSSYGQ 1155
Query: 797 SGPGPGMGISANNQMHGQGPSQPCGAVPLG--RMPSAGMQNRPFPGNMSSMTPSSPGMSQ 854
G G G GP+ G G S+G Q+ G + G Q
Sbjct: 1156 HGTGSSQSSGCGQHESGSGPTTSFGQHVSGSDNFSSSG-QHISDSGQSTGFGQYGSGSGQ 1214
Query: 855 QGGPGMGPPM-----PTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYS 909
G G G TV+ + + + +S QS QG Q+G + S
Sbjct: 1215 STGLGQGESQQVESGSTVHGRQETTHGQTINTTRHS-QSGQGQ---STQTGSRVTRRRRS 1270
Query: 910 QPMNNSSSLMNTQ 922
NS S ++++
Sbjct: 1271 SQSENSDSEVHSK 1283
Score = 82.4 bits (202), Expect = 4e-15
Identities = 156/767 (20%), Positives = 245/767 (31%), Gaps = 78/767 (10%)
Query: 60 QQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP 119
Q Q QH + G G G+ Q Q G + S G G
Sbjct: 620 QHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQ-STGFGQYGSGSGQSSGFGQHVSGSGQS 678
Query: 120 LLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSA 179
+ G+ G + G G G+ + G + +GS
Sbjct: 679 SGFGQHESRSGHSSYGQHGFGSSQSSGYGQHGSSSGQTSGFGQHELSSGQSSSFGQHGSG 738
Query: 180 APASGG-----PGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPN 234
+ S G G F QH + HS+ ++ + G Q S G
Sbjct: 739 SGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHG 798
Query: 235 SQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGG 294
S + G+ + G+G G G G G G G G + + + ++ ++G
Sbjct: 799 SGSSQSTGFGQYGSGSGQSAGFGQHGSGSGQSSGFGQHESRSHQSSYGQHGSGSSQSSGY 858
Query: 295 GGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHP 354
G G G ++G+G + G G G G+ S + G G +++G QH
Sbjct: 859 GQHGSSSGQTSGFG----QHRSSSGQYSGFGQHGSGSGQSSGFGQHGTGSGQYSGFGQHE 914
Query: 355 SGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQA----------AAAGA 404
S RS+ SY ++ S S+ Q S + + +G
Sbjct: 915 S-----------------RSHQSSYGQHGSGSSQSSGYGQHGSSSGQTFGFGQHRSGSGQ 957
Query: 405 AAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSP-GTPGPTMGRSQGSPMDPM 463
++G Q +G G G + + + Q S + S G G G SQ S
Sbjct: 958 SSGFGQHGSGSGQSSGFGQHESGSGKSSGFGQHESRSSQSNYGQHG--SGSSQSSGYGQH 1015
Query: 464 VMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGM-QYPQQQM 522
Q G G + S Q S G +G Q G G G +G QY +
Sbjct: 1016 GSSSGQTTGFGQHRSSSGQYSG---FGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESRSR 1072
Query: 523 PPQYGQQG-----VSGYCQQGQQP-----YYSQQPQPPHLPPQAQYLPSQSQQRYQPQQD 572
YGQ G SGY Q G + +P QY Q
Sbjct: 1073 QSSYGQHGSGSSQSSGYGQHGSNSGQTSGFGQHRPGSGQSSGFGQYGSGSGQ-----SSG 1127
Query: 573 MSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSAS 632
Q G GT A + + Q SS G + +G + VS S
Sbjct: 1128 FGQHGSGTGKSSGFAQHEYRSGQSSYGQHGTGSSQSSGCGQ-HESGSGPTTSFGQHVSGS 1186
Query: 633 GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPI-SPASIPGS 691
+ SS G H S S G S G G Q S + S +++ G
Sbjct: 1187 DNFSSSGQ-----------HISDSGQSTGFGQYGSGSGQSTGLGQGESQQVESGSTVHGR 1235
Query: 692 QMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGG 751
Q + Q+ +++ + S + G +R ++ + +S S
Sbjct: 1236 Q---ETTHGQTINTTRHSQSGQGQSTQTGSRVTRRRRSSQSENSDSEVHSKVSHRHSE-- 1290
Query: 752 QMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSG 798
+H S + S Q + +G +G+ +R +SG ++ +G
Sbjct: 1291 HIHTQAGSHYPKSGSTVRRRQGTTHGQRGDTTR-HGHSGHGQSTQTG 1336
Score = 82.4 bits (202), Expect = 4e-15
Identities = 177/821 (21%), Positives = 263/821 (32%), Gaps = 118/821 (14%)
Query: 34 HHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAPQPG 93
H H + H + Q Q Q + ++S G G G+ G
Sbjct: 684 HESRSGHSSYGQHGFGSSQSSGYGQHGSSSGQTSGFGQHELSSGQSSSFGQHGSGS---G 740
Query: 94 PDMEQPQHGGAKDSAAG-GQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGT 152
QHG ++G GQ + S+ G G+ + G + G G G+
Sbjct: 741 QSSGFGQHGSGSGQSSGFGQHE-------SRSGQSS-----YGQHSSGSSQSSGYGQHGS 788
Query: 153 QQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG----GPGGRAGPCFDQHGG---QQSPGM 205
+Q G G + F Y + ++G G G F QH Q S G
Sbjct: 789 RQTS-GFGQHGSGSSQSTGFGQYGSGSGQSAGFGQHGSGSGQSSGFGQHESRSHQSSYGQ 847
Query: 206 GMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGG 265
S+ ++ G GS Q S G S Y G+ + G+G G G G G G
Sbjct: 848 HGSGSSQSSGYGQHGSSSG-QTSGFGQHRSSSGQYSGFGQHGSGSGQSSGFGQHGTGSGQ 906
Query: 266 GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPG 325
G G + + + ++ ++G G G G + G+G + G G G G
Sbjct: 907 YSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTFGFG----QHRSGSGQSSGFG 962
Query: 326 GGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSP 385
G+ S + G G + +G QH S ++ + S S YG ++ S
Sbjct: 963 QHGSGSGQSSGFGQHESGSGKSSGFGQHESRSSQSNYGQHGSGSSQSSGYG----QHGSS 1018
Query: 386 SAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSP 445
S Q +S ++G +G Q +G G + + Q S S
Sbjct: 1019 SGQTTGFGQHRS---SSGQYSGFGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESRSRQSS 1075
Query: 446 -GTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGI 504
G G G SQ S Q G G + Q S G YG Q G
Sbjct: 1076 YGQHGS--GSSQSSGYGQHGSNSGQTSGFGQHRPGSGQSSG---FGQYGSGSGQSSGFGQ 1130
Query: 505 QGRTPGAMAGM-QYPQQQMPPQYGQQGVS-------GYCQQGQQPYYS---QQPQPPHLP 553
G G +G Q+ + YGQ G G + G P S +
Sbjct: 1131 HGSGTGKSSGFAQHEYRSGQSSYGQHGTGSSQSSGCGQHESGSGPTTSFGQHVSGSDNFS 1190
Query: 554 PQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLP----- 608
Q++ Q Q G G+ L G+ + R +
Sbjct: 1191 SSGQHISDSGQST-----GFGQYGSGSGQSTGLGQGESQQVESGSTVHGRQETTHGQTIN 1245
Query: 609 ----DLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGP 664
SG TG+ T S S ++ S+ S S S H+ + G
Sbjct: 1246 TTRHSQSGQGQSTQTGSRVTRRRRSSQSENSDSE------VHSKVSHRHSEHIHTQAGSH 1299
Query: 665 SP---SPVGSPVGSNQSRSGPISPASIPG----SQMPPQPPGSQ-------SESSSHPAL 710
P S V G+ + G + G +Q + G Q ++S H +
Sbjct: 1300 YPKSGSTVRRRQGTTHGQRGDTTRHGHSGHGQSTQTGSRTSGRQRFSHSDATDSEVHSGV 1359
Query: 711 SQSPMPQERGF-MAGTQRNP----------------------------QMAQYGPQQTGP 741
S P QE+ AG+Q Q Q G + TG
Sbjct: 1360 SHRPHSQEQTHSQAGSQHGESESTVHERHETTYGQTGEATGHGHSGHGQSTQRGSRTTGR 1419
Query: 742 SMSPHP-SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGN 781
S H S ++H+G S QS T+G SQ+G G+
Sbjct: 1420 RGSGHSESSDSEVHSGGSHRPQSQEQ-THGQAGSQHGESGS 1459
Score = 50.4 bits (119), Expect = 2e-05
Identities = 146/676 (21%), Positives = 210/676 (31%), Gaps = 79/676 (11%)
Query: 681 GPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG--FMAGTQRNPQMAQYGPQQ 738
G +S G P P SQS S ++ PQ G + G+ ++ QYG
Sbjct: 328 GCVSGGQPSGCGQPESNPCSQSYSQRGYGARENGQPQNCGGQWRTGSSQSSCCGQYG--- 384
Query: 739 TGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSG 798
+G S S S G + F S+SS + + QYG + S S+
Sbjct: 385 SGGSQSC--SNGQHEYGSCGRFSNSSSSNEFS-KCDQYGSGSSQS----------TSFEQ 431
Query: 799 PGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGM-QNRPFPGNMSSMTPSSPGMSQQGG 857
G G+ S+ + H G Q CG S G Q+ G S G Q G
Sbjct: 432 HGTGLSQSSGFEQHVCGSGQTCGQHESTSSQSLGYDQHGSSSGKTSGFGQHGSGSGQSSG 491
Query: 858 PGM-GPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSS 916
G G + Q + + + S G G Q + S Y Q + SS
Sbjct: 492 FGQCGSGSGQSSGFGQHGSVSGQSSGFGQHGSVSGQSSGFGQHESRSRQSSYGQHGSGSS 551
Query: 917 SLMNTQAPPYSMAPAMVNSSAASVGLADMMSPG----------ESKLPLPLKADGKEEGT 966
Q+ Y + S GL S G S G+ G
Sbjct: 552 -----QSSGYGQYGSRETSGFGQHGLGSGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGF 606
Query: 967 PQPESKSKKSS-SSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKK 1025
Q ES+S +SS ++G + Y G R+ + + GS S G+
Sbjct: 607 GQHESRSGQSSYGQHSSGSSQSSGY--GQHGSRQT------SGFGQHGSGSSQSTGFGQY 658
Query: 1026 PLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKI 1085
+ + + G Q + G + S Y Q+ F
Sbjct: 659 GSGSGQSSGFGQHVSGSGQSS--------------GFGQHESRSGHSSYGQHGFGSSQSS 704
Query: 1086 ERGEEPPPEVFSTGDTKK--QPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPT 1143
G+ S+G T Q +L ++ G G + QS+G G
Sbjct: 705 GYGQHGS----SSGQTSGFGQHELSSGQSSSFGQ-HGSGSGQSSGFGQHGSGSGQ----- 754
Query: 1144 PASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMP 1203
S+ GQ G S+ H S S S + + S + Q G G
Sbjct: 755 --SSGFGQHESRSG--QSSYGQHSSGSSQS-SGYGQHGSRQTSGFGQHGSGSSQSTGFGQ 809
Query: 1204 YEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGAS 1263
Y G + S GQ + S Q Y Q SG+ + G GQ S
Sbjct: 810 YGSGSGQSAGFGQHGSGSGQSSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTS 869
Query: 1264 YDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNM 1323
+H QY G GQ G Q + Q G ++ H+
Sbjct: 870 GFGQHRSSSGQYSG----FGQHGSGSGQSSGFGQHGTGSGQYSGFGQHESRSHQSSYGQH 925
Query: 1324 QYSSQQQEMYNQYGGS 1339
S Q Y Q+G S
Sbjct: 926 GSGSSQSSGYGQHGSS 941
Score = 34.3 bits (77), Expect = 1.4
Identities = 43/151 (28%), Positives = 57/151 (37%), Gaps = 23/151 (15%)
Query: 1211 FGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQ---RQQFPYG--ASYD 1265
FG G S F GQ + S Q Y Q SG+ + G GQ RQ +G S
Sbjct: 745 FGQHGSGSGQSSGF---GQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGS 801
Query: 1266 RRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQY 1325
+ +GQ G G +G +G H G Q + +H ++ H+
Sbjct: 802 SQSTGFGQYGSGSGQSAG---FGQHGSG-SGQSSGFGQH-------ESRSHQSSYGQHGS 850
Query: 1326 SSQQQEMYNQYG---GSYSG-PDRRPIQGQY 1352
S Q Y Q+G G SG R GQY
Sbjct: 851 GSSQSSGYGQHGSSSGQTSGFGQHRSSSGQY 881
Score = 34.3 bits (77), Expect = 1.4
Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
Query: 1211 FGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEP 1270
FG G S F GQ + S Q Y Q SG+ + G GQ S +
Sbjct: 1051 FGQHGTGSGQSSGF---GQYESRSRQSSYGQHGSGSSQSSGYGQH------GSNSGQTSG 1101
Query: 1271 YGQQYPGQGPPSGQPPYG 1288
+GQ PG G SG YG
Sbjct: 1102 FGQHRPGSGQSSGFGQYG 1119
Score = 33.9 bits (76), Expect = 1.8
Identities = 53/208 (25%), Positives = 60/208 (28%), Gaps = 41/208 (19%)
Query: 1211 FGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEP 1270
FG V G S F GQ + S Q Y Q G G Q YG R
Sbjct: 518 FGQHGSVSGQSSGF---GQHESRSRQSSYGQH--------GSGSSQSSGYGQYGSRETSG 566
Query: 1271 YGQQYPGQGPPSGQPPYG---GHQPGLYPQ------------------QPNYKRHMDGM- 1308
+GQ G G +G YG G G Q +Y +H G
Sbjct: 567 FGQHGLGSGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSS 626
Query: 1309 ----YGPPAKRHEGDMYNMQYSSQQQEMYNQYG---GSYSGPDRRPI-QGQYPYPYSRER 1360
YG R S Q + QYG G SG + GQ E
Sbjct: 627 QSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQSSGFGQHVSGSGQSSGFGQHES 686
Query: 1361 MQGPGQIQTHGIPPQMMGGPLQSSSSEG 1388
G HG G Q SS G
Sbjct: 687 RSGHSSYGQHGFGSSQSSGYGQHGSSSG 714
Score = 33.5 bits (75), Expect = 2.3
Identities = 38/144 (26%), Positives = 54/144 (37%), Gaps = 29/144 (20%)
Query: 730 QMAQYGPQQTGPSMSPHP-SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAY 788
Q Q G + G S H S ++H+G+S ++S TYG SQ+G G
Sbjct: 2089 QSTQRGSRTAGRRGSGHSESSDSEVHSGVS---HTHSGHTYGQARSQHGESG-------- 2137
Query: 789 SGVPSASYSGPGPGMGISANNQMHGQ---GPSQPCGAVPLGRMPSAGMQNR--------- 836
SA + G G + + HGQ G S G+ GR S+ ++
Sbjct: 2138 ----SAIHGRQGTIHGQTGDTTRHGQSGHGQSTQTGSRTTGRQRSSHSESSDSEVHSEAS 2193
Query: 837 -PFPGNMSSMTPSSPGMSQQGGPG 859
G+ S S G S G G
Sbjct: 2194 PTHSGHTHSQAGSRHGQSGSSGHG 2217
Score = 33.1 bits (74), Expect = 3.1
Identities = 44/151 (29%), Positives = 54/151 (35%), Gaps = 23/151 (15%)
Query: 1211 FGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEP 1270
FG G S F GQ + S Q Y Q SG+ + G GQ S +
Sbjct: 974 FGQHESGSGKSSGF---GQHESRSSQSNYGQHGSGSSQSSGYGQH------GSSSGQTTG 1024
Query: 1271 YGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGM-----YGPPAKRHEGDMYNMQY 1325
+GQ G SG +G H G Q + +H G +G R Y
Sbjct: 1025 FGQHRSSSGQYSG---FGQHGSG-SDQSSGFGQHGTGSGQSSGFGQYESRSRQSSYGQHG 1080
Query: 1326 S-SQQQEMYNQYG---GSYSG-PDRRPIQGQ 1351
S S Q Y Q+G G SG RP GQ
Sbjct: 1081 SGSSQSSGYGQHGSNSGQTSGFGQHRPGSGQ 1111
Score = 32.0 bits (71), Expect = 6.8
Identities = 48/178 (26%), Positives = 57/178 (32%), Gaps = 33/178 (18%)
Query: 1233 SSMQDMYNQ--SPSGAMSNLGM-----GQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQP 1285
SS Y Q S SG S G GQ F S + +GQ G G SG
Sbjct: 700 SSQSSGYGQHGSSSGQTSGFGQHELSSGQSSSFGQHGSGSGQSSGFGQHGSGSGQSSG-- 757
Query: 1286 PYGGHQPGLYPQQPNYKRHMDGM-----YGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSY 1340
+G H+ Q +Y +H G YG R S Q + QYG
Sbjct: 758 -FGQHES--RSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGS 814
Query: 1341 ----------SGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEG 1388
SG + GQ+ SR GQ HG G Q SS G
Sbjct: 815 GQSAGFGQHGSGSGQSSGFGQHE---SRSHQSSYGQ---HGSGSSQSSGYGQHGSSSG 866
Score = 32.0 bits (71), Expect = 6.8
Identities = 49/196 (25%), Positives = 63/196 (32%), Gaps = 44/196 (22%)
Query: 1228 GQMPNSSMQDMYNQSPSGAMSNLGMGQR-----QQFPYG---------------ASYDRR 1267
GQ + S Q Y Q SG+ + G GQ Q F +G S +
Sbjct: 911 GQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTFGFGQHRSGSGQSSGFGQHGSGSGQ 970
Query: 1268 HEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGM-----YGPPAKRHEGDMYN 1322
+GQ G G SG +G H+ Q NY +H G YG G
Sbjct: 971 SSGFGQHESGSGKSSG---FGQHES--RSSQSNYGQHGSGSSQSSGYGQHGS-SSGQTTG 1024
Query: 1323 MQYSSQQQEMYNQYGGSYSGPDRRPIQGQ----------YPYPYSRERMQGPGQIQTHGI 1372
Y+ +G SG D+ GQ + SR R GQ HG
Sbjct: 1025 FGQHRSSSGQYSGFGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESRSRQSSYGQ---HGS 1081
Query: 1373 PPQMMGGPLQSSSSEG 1388
G Q S+ G
Sbjct: 1082 GSSQSSGYGQHGSNSG 1097
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 102 bits (254), Expect = 4e-21
Identities = 157/651 (24%), Positives = 215/651 (33%), Gaps = 123/651 (18%)
Query: 374 SYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWA 433
S G + P Y P PP P P S A+ + G M + A
Sbjct: 152 SQGPARP-YHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPP 210
Query: 434 AAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYG 493
A HP + PG G G G PM P G + P ++P S G
Sbjct: 211 GAPP-PHPQLYPGGTG---GVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSG 266
Query: 494 PPG-----PQRYPIGIQGRTPGAMAGMQYPQ--QQMPPQYGQQGVSGYCQQGQQPYYSQQ 546
G P P+G G P A +P +PP + ++ P Q
Sbjct: 267 ASGAPPTKPPTTPVG-GGNLPSAPPPANFPHVTPNLPPPPALRPLNN--ASASPPGLGAQ 323
Query: 547 PQPPHLP-PQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPS 605
P P HLP P A Q M G P LAP P
Sbjct: 324 PLPGHLPSPHAM------------GQGMGGLPPGPEKGPTLAPS--------------PH 357
Query: 606 SLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFS------PHASPHLSS 659
SLP S S P + SS+ SA+ S+SS S+ + P S PH+ P +S
Sbjct: 358 SLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTS 417
Query: 660 IP---------------------GGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPP 698
+ G P P P G + ++ + GP P++ G+Q PP
Sbjct: 418 LSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPST--GAQSTAHPP 475
Query: 699 GSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGIS 758
S+ H Q Q++ Q+ GP P PHP GG H
Sbjct: 476 ----VSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP--PGAFPHPLEGGSSHHA-H 528
Query: 759 SFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGP-GPGMGISANNQMHGQGPS 817
+ S S G+ P P G PP +S V S S +GP GP + S+N+ S
Sbjct: 529 PYAMSPSLGSLRPY-----PPGPAHLPPPHSQV-SYSQAGPNGPPVSSSSNSSSSTSQGS 582
Query: 818 QPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAA 877
PC + SP QG P PP+PTV + +
Sbjct: 583 YPC-------------------------SHPSPSQGPQGAPYPFPPVPTVTTSSATLSTV 617
Query: 878 VMQAAANSAQSRQGSFPGMNQSGLMASS------------SPYSQPMNNSSSLMNTQAPP 925
+ A++ A + S PG G A S P S P + + +
Sbjct: 618 IATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTS 677
Query: 926 YSMAPAMVNSSAASVGLADMMSPGESKLP-LPLKADGKEEGTPQPESKSKK 975
P + +VG + G S LP LP G P ++ K+
Sbjct: 678 PPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQ 728
Score = 86.3 bits (212), Expect = 3e-16
Identities = 120/488 (24%), Positives = 171/488 (35%), Gaps = 91/488 (18%)
Query: 532 SGYCQQGQQPYYSQQPQPPHLPPQAQ---YLPSQSQQRYQPQQDMSQEGYGTRSQPPLA- 587
SG Q +PY+ PP PP Q P Q + ++P ++ GY +PP +
Sbjct: 149 SGLSQGPARPYHP----PPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSR 204
Query: 588 -----PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQS 642
PG P P P +G + P +A S G G Q
Sbjct: 205 MFQAPPGAP---------PPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNG--GKQH 253
Query: 643 NPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPG--SQMPPQPP-- 698
P +P S +S G P P +PVG S P PA+ P +PP P
Sbjct: 254 PPPTTPISVSSS----GASGAPPTKPPTTPVGGGNLPSAP-PPANFPHVTPNLPPPPALR 308
Query: 699 GSQSESSSHPALSQSPMPQER-----------GFMAGTQRNPQMAQYGPQQTGPSMSPHP 747
+ S+S P L P+P G G ++ P +A P P+ S P
Sbjct: 309 PLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAP-SPHSLPPASSSAP 367
Query: 748 SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISA 807
+P + SS + +S + S P PA +PS +S P P +
Sbjct: 368 APPMRFPYSSSSSSSAAASSSSSSSSSSASPF------PASQALPSYPHSFPPPTSLSVS 421
Query: 808 NNQMHGQGPSQPCGAV---------PLGRM-PSAGMQNRPFPGNMSSMTPSSPGMSQQGG 857
N PS P AV P GR+ ++ PFP + + + + P +S
Sbjct: 422 NQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHH 481
Query: 858 PGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSS 917
++ Q+ Q NS G+FP P+ SS
Sbjct: 482 HHQQQQQQQQQQQQQQQQQ--QQHHGNSGPPPPGAFP---------------HPLEGGSS 524
Query: 918 LMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQ--PESKSKK 975
A PY+M+P S+G PG + LP P + P P S S
Sbjct: 525 ---HHAHPYAMSP--------SLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSN 573
Query: 976 SSSSTTTG 983
SSSST+ G
Sbjct: 574 SSSSTSQG 581
Score = 81.6 bits (200), Expect = 7e-15
Identities = 156/668 (23%), Positives = 200/668 (29%), Gaps = 112/668 (16%)
Query: 106 DSAAG---GQADPPGPPLLSKPGDED-DAPPKMGEPAGGRYEHPGLGALGTQQP------ 155
DS++G G A P PP L P + D+ P+ +P HP + G P
Sbjct: 146 DSSSGLSQGPARPYHPPPLFPPSPQPPDSTPR--QPEASFEPHPSVTPTGYHAPMEPPTS 203
Query: 156 -------------PVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQS 202
P PGG GG + P G AA + GGP G G Q
Sbjct: 204 RMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNG---------GKQHP 254
Query: 203 PGMGMMHSASAAAAGAPGSMDPLQ-----NSHEGYPNSQCNHY-PGYSRPGAGGGGGGGG 256
P + +S+ A+GAP + P N P + H P P A
Sbjct: 255 PPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNN-- 312
Query: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG-GSSAGYGVLSSPRQ 315
A A G GA + A G G GG G G + SP
Sbjct: 313 --------------ASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHS 358
Query: 316 QGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATP-TLNQLLTS-----PS 369
P S +++ SAA + + S A+P +Q L S P
Sbjct: 359 LPPASSSAPAPPMRFPYSSSSSSSAAAS----SSSSSSSSSASPFPASQALPSYPHSFPP 414
Query: 370 PMMRSYGGSYPEYSSPSAPP-------PPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMG 422
P S P+Y+ PS P PPP P + A A G G
Sbjct: 415 PTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGP-------FPPSTG 467
Query: 423 AQYAAASPAWA-----AAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNP 477
AQ A P QQ+ P P P L G GS+
Sbjct: 468 AQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHP-LEG-GSSH 525
Query: 478 HSQPQQSSPYPGGSYG-PPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQ 536
H+ P SP G PPGP P P + PP S
Sbjct: 526 HAHPYAMSPSLGSLRPYPPGPAHLP------PPHSQVSYSQAGPNGPPVSSSSNSSSSTS 579
Query: 537 QGQQPYYSQQPQPPHLPPQAQY---------LPSQSQQRYQPQQDMSQEGYGTRSQPPLA 587
QG P P P P A Y S + S GY T S P
Sbjct: 580 QGSYP--CSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPP 637
Query: 588 PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS 647
P + P GS TGT +G + +
Sbjct: 638 PYGKRAPSPGAYKTATPPGYKP--GSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPG 695
Query: 648 PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMP----PQPPGSQSE 703
P P L S+P P+ G P+ + Q + P P S +P P PP +
Sbjct: 696 PLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKVVD 755
Query: 704 SSSHPALS 711
SH + S
Sbjct: 756 VPSHASQS 763
Score = 80.9 bits (198), Expect = 1e-14
Identities = 144/602 (23%), Positives = 196/602 (32%), Gaps = 97/602 (16%)
Query: 251 GGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVL 310
GG GG G G GGG + GG G + + G G V
Sbjct: 222 GGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPV- 280
Query: 311 SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSP 370
GG + P ++ A A + GA P L L SP
Sbjct: 281 -----GGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQP-LPGHLPSPHA 334
Query: 371 MMRSYGGSYP-EYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAAS 429
M + GG P P+ P P S P + ++A M Y+++S
Sbjct: 335 MGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAP---------------APPMRFPYSSSS 379
Query: 430 PAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG 489
+ AAA S + S +P P SQ P P P + + P Q S P
Sbjct: 380 SSSAAASSSSSSSSSSASPFPA---SQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQA 436
Query: 490 -GSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQ 548
S GPP P Y GR +A PP G Q +
Sbjct: 437 VWSQGPPPPPPY-----GR---LLANSNAHPGPFPPSTGAQSTA---------------H 473
Query: 549 PPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLP 608
PP + Q QQ+ Q QQ Q+ + S PP P+ + P ++
Sbjct: 474 PPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMS 533
Query: 609 DLSGSIDDLPTG--------TEATLSSA-------VSASGSTSSQGDQSNPAQSPFSPHA 653
GS+ P G ++ + S A S+S S+SS S P P SP
Sbjct: 534 PSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHP-SPSQ 592
Query: 654 SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISP-----ASIPGSQMPPQPPGSQSESSSHP 708
P G P P P PV + + S +S AS P PPG P
Sbjct: 593 GPQ-----GAPYPFP---PVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAP 644
Query: 709 ALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGT 768
+ G+ G +P + G SP PG +F+ + +
Sbjct: 645 SPGAYKTATPPGYKPG---SPPSFRTGTPPGYRGTSPPAGPG--------TFKPGSPTVG 693
Query: 769 YGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRM 828
GP + GP G S PP P+A S GP + + Q + P VP R
Sbjct: 694 PGP-LPPAGPSGLPSLPPP----PAAPAS--GPPLSATQIKQEPAEEYETPESPVPPARS 746
Query: 829 PS 830
PS
Sbjct: 747 PS 748
Score = 70.9 bits (172), Expect = 1e-11
Identities = 118/519 (22%), Positives = 173/519 (33%), Gaps = 112/519 (21%)
Query: 1091 PPPEVFSTGDTKKQPKLQPPS---PANSGSLQGP-----------QTPQSTGSNSMAEVP 1136
PPP F P L PP P N+ S P +P + G P
Sbjct: 289 PPPANFP----HVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP 344
Query: 1137 GDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMP 1196
G K PT A +PH P + + P+S S SS +S + ++
Sbjct: 345 GPEKGPTLAPSPHS--LPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSS-------- 394
Query: 1197 DVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQ 1256
+ PF + +P F + S+ Y Q + + G
Sbjct: 395 ----------SASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPP 444
Query: 1257 QFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRH 1316
PYG R +PG PPS G Q +P + H H
Sbjct: 445 PPPYG-----RLLANSNAHPGPFPPST-----GAQSTAHPPVSTHHHH-----------H 483
Query: 1317 EGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQM 1376
+ Q QQQ+ Q+ G+ SGP P G +P+P ++G H
Sbjct: 484 QQQQQQQQQQQQQQQQQQQHHGN-SGP---PPPGAFPHP-----LEGGSSHHAH------ 528
Query: 1377 MGGPLQSSSSEGPQQNMWAARNDMPYPYQ----NRQGPGGPTQAPPYPGMNRTDDMMVPD 1432
P S S G + +P P+ ++ GP GP P N +
Sbjct: 529 ---PYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGP---PVSSSSNSSSSTSQGS 582
Query: 1433 QRINHESQWPSHVSQRQPY--------MSSSASMQPI-----TRPPQPSYQTPPSLPNHI 1479
+H S PS Q PY +SSA++ + + P +PP P +
Sbjct: 583 YPCSHPS--PSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYG 640
Query: 1480 SRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPT---------SQVTGPPPQPP- 1529
RAPSP +++ + P P + T P S GP P PP
Sbjct: 641 KRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPA 700
Query: 1530 -PIRREITFPPGSVEASQPVLK--QRRKITSKDIVTPEA 1565
P PP + AS P L Q ++ +++ TPE+
Sbjct: 701 GPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPES 739
Score = 62.4 bits (150), Expect = 5e-09
Identities = 73/279 (26%), Positives = 92/279 (32%), Gaps = 67/279 (24%)
Query: 13 TVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQ 72
+ G A P HHHHH QQQQQQQQQQQQQQQQQ
Sbjct: 465 STGAQSTAHPPVSTHHHHHQ-----------------------QQQQQQQQQQQQQQQQQ 501
Query: 73 QHPISNNNSLGGA------GGGAPQPGPDMEQPQHGGAKDSAAG-------------GQA 113
QH ++ GA GG + P P G + G QA
Sbjct: 502 QHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQA 561
Query: 114 DPPGPPLLSKPGDEDDA---------PPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGG 164
P GPP+ S P P G Y P + + T ++
Sbjct: 562 GPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTV---- 617
Query: 165 GPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
A V Y +A+P P G+ P SPG + G+P S
Sbjct: 618 -IATVASSPAGYKTASPPGPPPYGKRAP---------SPGAYKTATPPGYKPGSPPSF-- 665
Query: 225 LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSG 263
+ GY + PG +PG+ G G G SG
Sbjct: 666 RTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSG 704
Score = 59.7 bits (143), Expect = 3e-08
Identities = 109/462 (23%), Positives = 156/462 (33%), Gaps = 100/462 (21%)
Query: 1094 EVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPAS-TPHGQM 1152
E ST KQ + + S + S P+ ++ + P DL S G
Sbjct: 60 EEASTPKVNKQGRSEEISESESEETNAPKKTKTEQELPRPQSPSDLDSLDGRSLNDDGSS 119
Query: 1153 TPM---QGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKD 1209
P Q RS++ S++ P S +DS S P PY P + P P+
Sbjct: 120 DPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHP----PPLFPPSPQPPDST 175
Query: 1210 PFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQF--PYGASYDRR 1267
P + P +S + + +P+G + + + F P GA
Sbjct: 176 P------------------RQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAP---- 213
Query: 1268 HEPYGQQYPG------QGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGP-PAKRHEGDM 1320
P+ Q YPG GPP G P GG + GP K+H
Sbjct: 214 -PPHPQLYPGGTGGVLSGPPMG--PKGGGA-------------ASSVGGPNGGKQHPPPT 257
Query: 1321 YNMQYSSQQQEMYNQYGGSYSGPDRRPIQG----QYPYPYSRERMQGPGQIQTHGIPPQM 1376
+ SS G + P P+ G P P + + T +PP
Sbjct: 258 TPISVSSS-----GASGAPPTKPPTTPVGGGNLPSAPPPANFPHV-------TPNLPPPP 305
Query: 1377 MGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPG--------GPTQAP-PYPGMNRTDD 1427
PL ++S+ P +P P+ QG G GPT AP P+ +
Sbjct: 306 ALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSS 365
Query: 1428 MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1487
P R + S S + SSS+S P P+ Q PS P+ P P S
Sbjct: 366 APAPPMRFPYSSSSSSSAAASSSSSSSSSSASPF-----PASQALPSYPHSF---PPPTS 417
Query: 1488 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPP 1529
S+ N+ P LPS + GPPP PP
Sbjct: 418 L--SVSNQPPKYTQPSLPSQAVWS----------QGPPPPPP 447
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 102 bits (254), Expect = 4e-21
Identities = 157/651 (24%), Positives = 215/651 (33%), Gaps = 123/651 (18%)
Query: 374 SYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWA 433
S G + P Y P PP P P S A+ + G M + A
Sbjct: 152 SQGPARP-YHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPP 210
Query: 434 AAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYG 493
A HP + PG G G G PM P G + P ++P S G
Sbjct: 211 GAPP-PHPQLYPGGTG---GVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSG 266
Query: 494 PPG-----PQRYPIGIQGRTPGAMAGMQYPQ--QQMPPQYGQQGVSGYCQQGQQPYYSQQ 546
G P P+G G P A +P +PP + ++ P Q
Sbjct: 267 ASGAPPTKPPTTPVG-GGNLPSAPPPANFPHVTPNLPPPPALRPLNN--ASASPPGLGAQ 323
Query: 547 PQPPHLP-PQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPS 605
P P HLP P A Q M G P LAP P
Sbjct: 324 PLPGHLPSPHAM------------GQGMGGLPPGPEKGPTLAPS--------------PH 357
Query: 606 SLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFS------PHASPHLSS 659
SLP S S P + SS+ SA+ S+SS S+ + P S PH+ P +S
Sbjct: 358 SLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTS 417
Query: 660 IP---------------------GGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPP 698
+ G P P P G + ++ + GP P++ G+Q PP
Sbjct: 418 LSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPST--GAQSTAHPP 475
Query: 699 GSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGIS 758
S+ H Q Q++ Q+ GP P PHP GG H
Sbjct: 476 ----VSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPP--PGAFPHPLEGGSSHHA-H 528
Query: 759 SFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGP-GPGMGISANNQMHGQGPS 817
+ S S G+ P P G PP +S V S S +GP GP + S+N+ S
Sbjct: 529 PYAMSPSLGSLRPY-----PPGPAHLPPPHSQV-SYSQAGPNGPPVSSSSNSSSSTSQGS 582
Query: 818 QPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAA 877
PC + SP QG P PP+PTV + +
Sbjct: 583 YPC-------------------------SHPSPSQGPQGAPYPFPPVPTVTTSSATLSTV 617
Query: 878 VMQAAANSAQSRQGSFPGMNQSGLMASS------------SPYSQPMNNSSSLMNTQAPP 925
+ A++ A + S PG G A S P S P + + +
Sbjct: 618 IATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTS 677
Query: 926 YSMAPAMVNSSAASVGLADMMSPGESKLP-LPLKADGKEEGTPQPESKSKK 975
P + +VG + G S LP LP G P ++ K+
Sbjct: 678 PPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQ 728
Score = 86.3 bits (212), Expect = 3e-16
Identities = 120/488 (24%), Positives = 171/488 (35%), Gaps = 91/488 (18%)
Query: 532 SGYCQQGQQPYYSQQPQPPHLPPQAQ---YLPSQSQQRYQPQQDMSQEGYGTRSQPPLA- 587
SG Q +PY+ PP PP Q P Q + ++P ++ GY +PP +
Sbjct: 149 SGLSQGPARPYHP----PPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYHAPMEPPTSR 204
Query: 588 -----PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQS 642
PG P P P +G + P +A S G G Q
Sbjct: 205 MFQAPPGAP---------PPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNG--GKQH 253
Query: 643 NPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPG--SQMPPQPP-- 698
P +P S +S G P P +PVG S P PA+ P +PP P
Sbjct: 254 PPPTTPISVSSS----GASGAPPTKPPTTPVGGGNLPSAP-PPANFPHVTPNLPPPPALR 308
Query: 699 GSQSESSSHPALSQSPMPQER-----------GFMAGTQRNPQMAQYGPQQTGPSMSPHP 747
+ S+S P L P+P G G ++ P +A P P+ S P
Sbjct: 309 PLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAP-SPHSLPPASSSAP 367
Query: 748 SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISA 807
+P + SS + +S + S P PA +PS +S P P +
Sbjct: 368 APPMRFPYSSSSSSSAAASSSSSSSSSSASPF------PASQALPSYPHSFPPPTSLSVS 421
Query: 808 NNQMHGQGPSQPCGAV---------PLGRM-PSAGMQNRPFPGNMSSMTPSSPGMSQQGG 857
N PS P AV P GR+ ++ PFP + + + + P +S
Sbjct: 422 NQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHH 481
Query: 858 PGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSS 917
++ Q+ Q NS G+FP P+ SS
Sbjct: 482 HHQQQQQQQQQQQQQQQQQ--QQHHGNSGPPPPGAFP---------------HPLEGGSS 524
Query: 918 LMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQ--PESKSKK 975
A PY+M+P S+G PG + LP P + P P S S
Sbjct: 525 ---HHAHPYAMSP--------SLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSN 573
Query: 976 SSSSTTTG 983
SSSST+ G
Sbjct: 574 SSSSTSQG 581
Score = 81.6 bits (200), Expect = 7e-15
Identities = 156/668 (23%), Positives = 200/668 (29%), Gaps = 112/668 (16%)
Query: 106 DSAAG---GQADPPGPPLLSKPGDED-DAPPKMGEPAGGRYEHPGLGALGTQQP------ 155
DS++G G A P PP L P + D+ P+ +P HP + G P
Sbjct: 146 DSSSGLSQGPARPYHPPPLFPPSPQPPDSTPR--QPEASFEPHPSVTPTGYHAPMEPPTS 203
Query: 156 -------------PVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQS 202
P PGG GG + P G AA + GGP G G Q
Sbjct: 204 RMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNG---------GKQHP 254
Query: 203 PGMGMMHSASAAAAGAPGSMDPLQ-----NSHEGYPNSQCNHY-PGYSRPGAGGGGGGGG 256
P + +S+ A+GAP + P N P + H P P A
Sbjct: 255 PPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNN-- 312
Query: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG-GSSAGYGVLSSPRQ 315
A A G GA + A G G GG G G + SP
Sbjct: 313 --------------ASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHS 358
Query: 316 QGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATP-TLNQLLTS-----PS 369
P S +++ SAA + + S A+P +Q L S P
Sbjct: 359 LPPASSSAPAPPMRFPYSSSSSSSAAAS----SSSSSSSSSASPFPASQALPSYPHSFPP 414
Query: 370 PMMRSYGGSYPEYSSPSAPP-------PPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMG 422
P S P+Y+ PS P PPP P + A A G G
Sbjct: 415 PTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGP-------FPPSTG 467
Query: 423 AQYAAASPAWA-----AAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNP 477
AQ A P QQ+ P P P L G GS+
Sbjct: 468 AQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHP-LEG-GSSH 525
Query: 478 HSQPQQSSPYPGGSYG-PPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQ 536
H+ P SP G PPGP P P + PP S
Sbjct: 526 HAHPYAMSPSLGSLRPYPPGPAHLP------PPHSQVSYSQAGPNGPPVSSSSNSSSSTS 579
Query: 537 QGQQPYYSQQPQPPHLPPQAQY---------LPSQSQQRYQPQQDMSQEGYGTRSQPPLA 587
QG P P P P A Y S + S GY T S P
Sbjct: 580 QGSYP--CSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPP 637
Query: 588 PGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQS 647
P + P GS TGT +G + +
Sbjct: 638 PYGKRAPSPGAYKTATPPGYKP--GSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPG 695
Query: 648 PFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMP----PQPPGSQSE 703
P P L S+P P+ G P+ + Q + P P S +P P PP +
Sbjct: 696 PLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKVVD 755
Query: 704 SSSHPALS 711
SH + S
Sbjct: 756 VPSHASQS 763
Score = 80.9 bits (198), Expect = 1e-14
Identities = 144/602 (23%), Positives = 196/602 (32%), Gaps = 97/602 (16%)
Query: 251 GGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVL 310
GG GG G G GGG + GG G + + G G V
Sbjct: 222 GGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPV- 280
Query: 311 SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSP 370
GG + P ++ A A + GA P L L SP
Sbjct: 281 -----GGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQP-LPGHLPSPHA 334
Query: 371 MMRSYGGSYP-EYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAAS 429
M + GG P P+ P P S P + ++A M Y+++S
Sbjct: 335 MGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAP---------------APPMRFPYSSSS 379
Query: 430 PAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPG 489
+ AAA S + S +P P SQ P P P + + P Q S P
Sbjct: 380 SSSAAASSSSSSSSSSASPFPA---SQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQA 436
Query: 490 -GSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQ 548
S GPP P Y GR +A PP G Q +
Sbjct: 437 VWSQGPPPPPPY-----GR---LLANSNAHPGPFPPSTGAQSTA---------------H 473
Query: 549 PPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLP 608
PP + Q QQ+ Q QQ Q+ + S PP P+ + P ++
Sbjct: 474 PPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMS 533
Query: 609 DLSGSIDDLPTG--------TEATLSSA-------VSASGSTSSQGDQSNPAQSPFSPHA 653
GS+ P G ++ + S A S+S S+SS S P P SP
Sbjct: 534 PSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHP-SPSQ 592
Query: 654 SPHLSSIPGGPSPSPVGSPVGSNQSRSGPISP-----ASIPGSQMPPQPPGSQSESSSHP 708
P G P P P PV + + S +S AS P PPG P
Sbjct: 593 GPQ-----GAPYPFP---PVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAP 644
Query: 709 ALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGT 768
+ G+ G +P + G SP PG +F+ + +
Sbjct: 645 SPGAYKTATPPGYKPG---SPPSFRTGTPPGYRGTSPPAGPG--------TFKPGSPTVG 693
Query: 769 YGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRM 828
GP + GP G S PP P+A S GP + + Q + P VP R
Sbjct: 694 PGP-LPPAGPSGLPSLPPP----PAAPAS--GPPLSATQIKQEPAEEYETPESPVPPARS 746
Query: 829 PS 830
PS
Sbjct: 747 PS 748
Score = 70.9 bits (172), Expect = 1e-11
Identities = 118/519 (22%), Positives = 173/519 (33%), Gaps = 112/519 (21%)
Query: 1091 PPPEVFSTGDTKKQPKLQPPS---PANSGSLQGP-----------QTPQSTGSNSMAEVP 1136
PPP F P L PP P N+ S P +P + G P
Sbjct: 289 PPPANFP----HVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPP 344
Query: 1137 GDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMP 1196
G K PT A +PH P + + P+S S SS +S + ++
Sbjct: 345 GPEKGPTLAPSPHS--LPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSS-------- 394
Query: 1197 DVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQ 1256
+ PF + +P F + S+ Y Q + + G
Sbjct: 395 ----------SASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPP 444
Query: 1257 QFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRH 1316
PYG R +PG PPS G Q +P + H H
Sbjct: 445 PPPYG-----RLLANSNAHPGPFPPST-----GAQSTAHPPVSTHHHH-----------H 483
Query: 1317 EGDMYNMQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQM 1376
+ Q QQQ+ Q+ G+ SGP P G +P+P ++G H
Sbjct: 484 QQQQQQQQQQQQQQQQQQQHHGN-SGP---PPPGAFPHP-----LEGGSSHHAH------ 528
Query: 1377 MGGPLQSSSSEGPQQNMWAARNDMPYPYQ----NRQGPGGPTQAPPYPGMNRTDDMMVPD 1432
P S S G + +P P+ ++ GP GP P N +
Sbjct: 529 ---PYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGP---PVSSSSNSSSSTSQGS 582
Query: 1433 QRINHESQWPSHVSQRQPY--------MSSSASMQPI-----TRPPQPSYQTPPSLPNHI 1479
+H S PS Q PY +SSA++ + + P +PP P +
Sbjct: 583 YPCSHPS--PSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYG 640
Query: 1480 SRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPT---------SQVTGPPPQPP- 1529
RAPSP +++ + P P + T P S GP P PP
Sbjct: 641 KRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPA 700
Query: 1530 -PIRREITFPPGSVEASQPVLK--QRRKITSKDIVTPEA 1565
P PP + AS P L Q ++ +++ TPE+
Sbjct: 701 GPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPES 739
Score = 62.4 bits (150), Expect = 5e-09
Identities = 73/279 (26%), Positives = 92/279 (32%), Gaps = 67/279 (24%)
Query: 13 TVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQ 72
+ G A P HHHHH QQQQQQQQQQQQQQQQQ
Sbjct: 465 STGAQSTAHPPVSTHHHHHQ-----------------------QQQQQQQQQQQQQQQQQ 501
Query: 73 QHPISNNNSLGGA------GGGAPQPGPDMEQPQHGGAKDSAAG-------------GQA 113
QH ++ GA GG + P P G + G QA
Sbjct: 502 QHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQA 561
Query: 114 DPPGPPLLSKPGDEDDA---------PPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGG 164
P GPP+ S P P G Y P + + T ++
Sbjct: 562 GPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTV---- 617
Query: 165 GPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
A V Y +A+P P G+ P SPG + G+P S
Sbjct: 618 -IATVASSPAGYKTASPPGPPPYGKRAP---------SPGAYKTATPPGYKPGSPPSF-- 665
Query: 225 LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSG 263
+ GY + PG +PG+ G G G SG
Sbjct: 666 RTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSG 704
Score = 59.7 bits (143), Expect = 3e-08
Identities = 109/462 (23%), Positives = 156/462 (33%), Gaps = 100/462 (21%)
Query: 1094 EVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPAS-TPHGQM 1152
E ST KQ + + S + S P+ ++ + P DL S G
Sbjct: 60 EEASTPKVNKQGRSEEISESESEETNAPKKTKTEQELPRPQSPSDLDSLDGRSLNDDGSS 119
Query: 1153 TPM---QGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKD 1209
P Q RS++ S++ P S +DS S P PY P + P P+
Sbjct: 120 DPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHP----PPLFPPSPQPPDST 175
Query: 1210 PFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQF--PYGASYDRR 1267
P + P +S + + +P+G + + + F P GA
Sbjct: 176 P------------------RQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAP---- 213
Query: 1268 HEPYGQQYPG------QGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGP-PAKRHEGDM 1320
P+ Q YPG GPP G P GG + GP K+H
Sbjct: 214 -PPHPQLYPGGTGGVLSGPPMG--PKGGGA-------------ASSVGGPNGGKQHPPPT 257
Query: 1321 YNMQYSSQQQEMYNQYGGSYSGPDRRPIQG----QYPYPYSRERMQGPGQIQTHGIPPQM 1376
+ SS G + P P+ G P P + + T +PP
Sbjct: 258 TPISVSSS-----GASGAPPTKPPTTPVGGGNLPSAPPPANFPHV-------TPNLPPPP 305
Query: 1377 MGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPG--------GPTQAP-PYPGMNRTDD 1427
PL ++S+ P +P P+ QG G GPT AP P+ +
Sbjct: 306 ALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSS 365
Query: 1428 MMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPAS 1487
P R + S S + SSS+S P P+ Q PS P+ P P S
Sbjct: 366 APAPPMRFPYSSSSSSSAAASSSSSSSSSSASPF-----PASQALPSYPHSF---PPPTS 417
Query: 1488 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPP 1529
S+ N+ P LPS + GPPP PP
Sbjct: 418 L--SVSNQPPKYTQPSLPSQAVWS----------QGPPPPPP 447
>gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo
sapiens]
Length = 412
Score = 102 bits (253), Expect = 5e-21
Identities = 98/347 (28%), Positives = 157/347 (45%), Gaps = 30/347 (8%)
Query: 960 DGKEEGTPQPESKSKKSSSST-------TTGEKITKVYELGNEPERKLWVDRYLTFMEER 1012
+ EE P + S SS T E+ ++YEL +P+RK ++D +FM++R
Sbjct: 71 EAAEESRPGAQGPSSPSSQPPGLHPHEWTYEEQFKQLYELDADPKRKEFLDDLFSFMQKR 130
Query: 1013 GSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTS-SSAASSLK 1071
G+PV+ +P + K+ LDL+ L+ V GGL +V K WRE+ L++ T+ +SAA +L+
Sbjct: 131 GTPVNRVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLR 190
Query: 1072 KQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNS 1131
QY++YL+ +EC+ R P E+ + D+ ++ + A L G P G+
Sbjct: 191 TQYMKYLYPYECE-TRALSSPGELQAAIDSNRREGRRQAYTAT--PLFGLAGPPPRGAQD 247
Query: 1132 MAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPN--APY 1189
A PG P T +S Q G +S + H + +S S K S PN
Sbjct: 248 PALGPGPAPPATQSSPGPAQ------GSTSGLPAH-ACAQLSPSPIKKEESGIPNPCLAL 300
Query: 1190 QQGMSMPDVMGRM-PYEP--NKDPFGGMRKVPGSSEP--FMTQGQMP--NSSMQDMYNQS 1242
G+++ ++ P EP + G P P F+ +G++P + N +
Sbjct: 301 PVGLALGPTREKLAPEEPPEKRAVLMGPMDPPRPCMPPSFLPRGKVPLREERLDGPLNLA 360
Query: 1243 PSGAMS-NLGMGQRQQFPYGASYDRRHEPYGQQYPGQ--GPPSGQPP 1286
SG S N+ + G + RR Q P PPS PP
Sbjct: 361 GSGISSINMALEINGVVYTGVLFARRQPVPASQGPTNPAPPPSTGPP 407
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 101 bits (252), Expect = 7e-21
Identities = 267/1174 (22%), Positives = 393/1174 (33%), Gaps = 269/1174 (22%)
Query: 440 HPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQR 499
+P + P TP P SQ MDP++ S H Q Q +P GS PP
Sbjct: 200 NPELQPRTPRPA---SQSDAMDPLL----------SGLHIQQQS---HPSGSLAPPHHPM 243
Query: 500 YPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYL 559
P+ + + M +PQ Q Q QQ QQ QQ Q Q Q
Sbjct: 244 QPVSVNRQ----MNPANFPQLQQQQQ----------QQQQQQQQQQQQQQQQQQQQLQAR 289
Query: 560 PSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPT 619
P Q Q+ QPQ Q + +Q P+ PG + LP+
Sbjct: 290 PPQQHQQQQPQGIRPQ--FTAPTQVPVPPG------------------------WNQLPS 323
Query: 620 GTEATLSSAVSASGSTSSQGDQSNPAQSPFSP--HASPHLSSIPGGPSPSPVGSPVGSNQ 677
G + S T++QG + P P A P L+++
Sbjct: 324 GALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQARPSLATV----------------- 366
Query: 678 SRSGPISPASIPGSQMPPQPPGSQSESSSH---PALS---QSPMPQERGFMAGTQRNPQM 731
P PP P GSQ S +H P +S Q PQ + G R P
Sbjct: 367 ---------QTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTP 417
Query: 732 AQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSN--SSGTYGPQMSQYGPQGNYSRPPAYS 789
Q P T + SP SP SSFQQ + SS T Q GP RPP +
Sbjct: 418 LQQ-PHLT--NKSPASSP--------SSFQQGSPASSPTVNQTQQQMGP-----RPPQNN 461
Query: 790 GVPSA---SYSGPGPGMGISANN------QMHGQGPSQ-PCGAVP-LGRMP-------SA 831
+P S PG + N M Q P+Q P P LG MP SA
Sbjct: 462 PLPQGFQQPVSSPGRNPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSA 521
Query: 832 GMQNRPF-PGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQ 890
G N F G + S T ++PG S G P N+ Q A N Q
Sbjct: 522 GQANPNFMQGQVPSTTATTPGNS-------GAPQLQANQNVQHAGGQGAGPPQNQMQVSH 574
Query: 891 GSFPGMNQSGLMASSSPYSQPMNNSS-----SLMNTQAPPYSMAPAMVNSSAASVGLADM 945
G P M Q LM + +S +L N Q P P+ + +G+
Sbjct: 575 GP-PNMMQPSLMGIHGNMNNQQAGTSGVPQVNLSNMQGQPQQGPPSQL------MGMHQQ 627
Query: 946 MSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRY 1005
+ P + ++ +++GT P++ S + + + + + N P + L
Sbjct: 628 IVPSQGQMV-------QQQGTLNPQNPMILSRA-----QLMPQGQMMVNPPSQNLGPS-- 673
Query: 1006 LTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSS 1065
+R +P + + ++ + + + G + +N ++ TN G
Sbjct: 674 ----PQRMTPPKQM--LSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQMQGNKQQ 727
Query: 1066 AASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTP- 1124
F + + P P G T P +Q +G + G P
Sbjct: 728 ---------------FNTQNQSNVMPGPAQIMRGPT---PNMQGNMVQFTGQMSGQMLPQ 769
Query: 1125 QSTGSNSMAEVPG----DLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSD-VSDSSFPK 1179
Q +NS ++V G L+PP P +PH M G ++T + S + D S +
Sbjct: 770 QGPVNNSPSQVMGIQGQVLRPPGP--SPH--MAQQHGDPATTANNDVSLSQMMPDVSIQQ 825
Query: 1180 RNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSM-QDM 1238
N + P+ QG S PF G P ++ M+ GQ P + +D+
Sbjct: 826 TNMVPPHVQAMQGNSASGNHFSGHGMSFNAPFSG---APNGNQ--MSCGQNPGFPVNKDV 880
Query: 1239 YNQSP---SGAMSNLGMG----QRQQFPYGASYDRRHEPYGQQYPGQGP-------PSG- 1283
SP + S++ G +Q A+ ++ +P ++ Q P+G
Sbjct: 881 TLTSPLLVNLLQSDISAGHFGVNNKQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGL 940
Query: 1284 ----QPPYGGHQ-----------------PGLYPQQPNYKRHMDGMYGPPAKRHEGDMYN 1322
QPP G Q P YP QP +R + M +
Sbjct: 941 EEADQPPLPGEQGINLDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQP 1000
Query: 1323 MQYSSQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQ-----IQTHGIPPQMM 1377
Q Q Q Q S P + Q Q MQ + + + PP+
Sbjct: 1001 PQQQPQPQLPQQQQPPPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPR-- 1058
Query: 1378 GGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINH 1437
GPL S P Q +P + GP PP P R M + +
Sbjct: 1059 -GPLNPDSQRMPMQQ----SGSVPVMVSLQ----GPASVPPSPDKQRMP--MPVNTPLGS 1107
Query: 1438 ESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMS 1497
S+ V Q P SS+ + + P+ S PS+P + PS ++
Sbjct: 1108 NSR--KMVYQESPQNPSSSPLAEMASLPEASGSEAPSVPGGPNNMPSHVVLPQNQLMMTG 1165
Query: 1498 PSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPI 1531
P P P S G PQ PP+
Sbjct: 1166 PKPGP-------------SPLSATQGATPQQPPV 1186
Score = 80.9 bits (198), Expect = 1e-14
Identities = 234/1039 (22%), Positives = 347/1039 (33%), Gaps = 185/1039 (17%)
Query: 349 GQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAA-- 406
G NQ PSGA P P S G AP P P Q Q QA + A
Sbjct: 317 GWNQLPSGAL--------QPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQARPSLATVQT 368
Query: 407 ----------GGQQAAAGMGLGKDMGAQYAAASPAWAAAQ----------QRSH-----P 441
G QQA+ M +P + Q Q+ H P
Sbjct: 369 PSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQPHLTNKSP 428
Query: 442 AMSPGTPGPTMGRSQGSP-MDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGP-PGPQR 499
A SP + QGSP P V + Q G +P Q++P P G P P R
Sbjct: 429 ASSPSS------FQQGSPASSPTVNQTQQQMG------PRPPQNNPLPQGFQQPVSSPGR 476
Query: 500 YPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQP----PHLPPQ 555
P+ QG P MQ PQ G+ G ++ + + Q P +P
Sbjct: 477 NPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPST 536
Query: 556 AQYLPSQS-QQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSI 614
P S + Q Q++ G G + PP + +H N++Q SL + G++
Sbjct: 537 TATTPGNSGAPQLQANQNVQHAG-GQGAGPPQNQMQVSHGPPNMMQ----PSLMGIHGNM 591
Query: 615 DDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVG 674
++ GT S V ++ QG P Q P S H +P +
Sbjct: 592 NNQQAGT-----SGVPQVNLSNMQG---QPQQGPPSQLMGMHQQIVPS-------QGQMV 636
Query: 675 SNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQY 734
Q P +P + +Q+ PQ + P+ + P PQ T ++Q
Sbjct: 637 QQQGTLNPQNPMILSRAQLMPQ----GQMMVNPPSQNLGPSPQRM-----TPPKQMLSQQ 687
Query: 735 GPQQTGPSMSPH---PSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGV 791
GPQ M+PH P GQ+ + + + Q+ Q + P
Sbjct: 688 GPQM----MAPHNQMMGPQGQVLLQQNPMIEQIMTNQMQGNKQQFNTQNQSNVMPG---- 739
Query: 792 PSASYSGPGPGMG---ISANNQMHGQGPSQ--PCGAVPLGRMPSAGMQNRPFPGNMSSMT 846
P+ GP P M + QM GQ Q P P M G RP PG M
Sbjct: 740 PAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNNSPSQVMGIQGQVLRP-PGPSPHMA 798
Query: 847 P--SSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQA-AANSAQSRQGSFPGMNQSGLMA 903
P + + MP V+ + +QA NSA S G M+
Sbjct: 799 QQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQAMQGNSASGNHFSGHG------MS 852
Query: 904 SSSPYS-QPMNNSSSLMNTQAPPYS-----MAPAMVN-----SSAASVGLADMMSPGESK 952
++P+S P N S P + +P +VN SA G+ + + +
Sbjct: 853 FNAPFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHFGVNNKQNNTNAN 912
Query: 953 LPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEP----ERKLWVDRYLTF 1008
P K P K K S T + E ++P E+ + +D
Sbjct: 913 KPKKKK----------PPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGINLDNSGPK 962
Query: 1009 MEERGSPVSSLPA--VGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSA 1066
+ E + P+ V ++PL + ++ + Q + + +L S
Sbjct: 963 LPEFSNRPPGYPSQPVEQRPLQQMPPQL-MQHVAPPPQPPQQQPQPQLPQQQQPPPPSQP 1021
Query: 1067 ASSLKKQYIQYLF----------AFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSG 1116
S ++Q Q + + + + PP + D+++ P Q S
Sbjct: 1022 QSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNP-DSQRMPMQQSGSVPVMV 1080
Query: 1117 SLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSS 1176
SLQGP S+ P + P P +TP G S + + + S S
Sbjct: 1081 SLQGPA--------SVPPSPDKQRMPMPVNTP-------LGSNSRKMVYQESPQNPSSSP 1125
Query: 1177 FPKRNSMTPNAPYQQGMSMPDVMGRMP----YEPNKDPFGGMRKVPGSSEPFMTQGQMPN 1232
+ S+ P A + S+P MP N+ G + PG S TQG P
Sbjct: 1126 LAEMASL-PEASGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPK--PGPSPLSATQGATPQ 1182
Query: 1233 SSMQDMYNQSPSGAMSNLG---MGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGG 1289
+ S N+ R + P AS PY Q P PPS +P
Sbjct: 1183 QPPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRAS----PRPYYPQTPNNRPPSTEPSEIS 1238
Query: 1290 HQP--------GLYPQQPN 1300
P GL+P Q N
Sbjct: 1239 LSPERLNASIAGLFPPQIN 1257
Score = 79.7 bits (195), Expect = 3e-14
Identities = 240/1059 (22%), Positives = 336/1059 (31%), Gaps = 207/1059 (19%)
Query: 48 LQQQLNQFQQQQQQQQQQQQQQQQQQ---------------------------------- 73
LQQQ Q QQQQQQQQQQQQQQQQQQ
Sbjct: 260 LQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQGIRPQFTAPTQVPVPPGWN 319
Query: 74 -------HPISNNNSLGGAGGG-----APQPGPDMEQPQHGGAKDSAAGGQADPPGPPLL 121
P SLG AP PGP +Q Q + + PP P
Sbjct: 320 QLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFG 379
Query: 122 SKPGDEDDAP-PKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAA 180
S+ + P+M P G++ P + +L Q P VP P P N +++
Sbjct: 380 SQQASQAHTNFPQMSNP--GQFTAPQMKSL--QGGPSRVP----TPLQQPHLTNKSPASS 431
Query: 181 PASGGPGGRA-GPCFD---QHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ 236
P+S G A P + Q G + P + +PG +P+ PN
Sbjct: 432 PSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPG-RNPMVQQGNVPPNFM 490
Query: 237 C------NHYPGYSRPGAGGGG---GGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAA 287
N P PG GG G G + G G A
Sbjct: 491 VMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFMQGQVPSTTATTPGNSGAPQLQ 550
Query: 288 AAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRF 347
A GG G G V P +MG G + +G
Sbjct: 551 ANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGI-HGNMNNQQAGTSGVPQVNLSNM 609
Query: 348 AGQNQH--PSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAA 405
GQ Q PS Q++ S M++ G P+ +P PQ Q +
Sbjct: 610 QGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQ--NPMILSRAQLMPQGQMMVNPPS 667
Query: 406 AGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSP-----GTPGPTMGRSQGSPM 460
+++G +P Q+ M+P G G + Q +PM
Sbjct: 668 -------------QNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVL--LQQNPM 712
Query: 461 DPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQ 520
+M Q+ G ++Q QS+ PG + GP G + G M+G PQQ
Sbjct: 713 IEQIMTN-QMQGNKQQFNTQ-NQSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQ 770
Query: 521 ----QMPPQYGQQGVSGYCQQ--GQQPYYSQQPQPPHLPPQ-----AQYLPSQSQQR--- 566
P Q G+ G + G P+ +QQ P +Q +P S Q+
Sbjct: 771 GPVNNSPSQV--MGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNM 828
Query: 567 ----YQPQQDMSQ-----EGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDL 617
Q Q S G+G P + G PN ++ Q D++ + L
Sbjct: 829 VPPHVQAMQGNSASGNHFSGHGMSFNAPFS-GAPNGNQMSCGQNPGFPVNKDVTLTSPLL 887
Query: 618 PTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVG------- 670
++ +S+ + + + + P + P + P P G
Sbjct: 888 VNLLQSDISAGHFGVNNKQNNTNANKPKKKK-PPRKKKNSQQDLNTPDTRPAGLEEADQP 946
Query: 671 ---SPVGSNQSRSGPISP--------------ASIPGSQMPPQ------PPGSQSESSSH 707
G N SGP P P QMPPQ PP +
Sbjct: 947 PLPGEQGINLDNSGPKLPEFSNRPPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQ 1006
Query: 708 PAL---SQSPMPQERGFMAGTQRNPQMAQYGPQQTGP-------SMSPHPSPGGQMHAGI 757
P L Q P P + Q+ QM Q P S + HP P G ++
Sbjct: 1007 PQLPQQQQPPPPSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHP-PRGPLNPD- 1064
Query: 758 SSFQQSNSSGTYGPQMSQYGPQ-------------------GNYSRPPAYSGVPSASYSG 798
S SG+ +S GP G+ SR Y P S
Sbjct: 1065 SQRMPMQQSGSVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSS 1124
Query: 799 PGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQ-QGG 857
P M S + PS P G MPS + P N MT PG S
Sbjct: 1125 PLAEMA-SLPEASGSEAPSVPGGP---NNMPS----HVVLPQNQLMMTGPKPGPSPLSAT 1176
Query: 858 PGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSS 917
G P P VN AA + SR ++ AS PY P ++
Sbjct: 1177 QGATPQQPPVNSLPSSHGHHFPNVAAPTQTSRP-------KTPNRASPRPY-YPQTPNNR 1228
Query: 918 LMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLP 956
+T+ S++P +N+S A + P + +PLP
Sbjct: 1229 PPSTEPSEISLSPERLNASIAG------LFPPQINIPLP 1261
Score = 77.8 bits (190), Expect = 1e-13
Identities = 200/927 (21%), Positives = 322/927 (34%), Gaps = 151/927 (16%)
Query: 312 SPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPM 371
+P QG + G + ++ GQ P G +P + Q P+
Sbjct: 748 TPNMQGNMVQFTGQMSGQMLPQQGPVNNSPSQVMGIQGQVLRPPGPSPHMAQQHGDPATT 807
Query: 372 MR---SYGGSYPEYSSPSAPPPPPSQPQSQAAAAGA----------------AAGGQQAA 412
S P+ S PP Q +A A G Q +
Sbjct: 808 ANNDVSLSQMMPDVSIQQTNMVPPHVQAMQGNSASGNHFSGHGMSFNAPFSGAPNGNQMS 867
Query: 413 AGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYG 472
G G + SP Q +S G G ++ + P K P+
Sbjct: 868 CGQNPGFPVNKDVTLTSPLLVNLLQSD---ISAGHFGVNNKQNNTNANKPKKKKPPR--- 921
Query: 473 MGSNPHSQPQQSSP--YPGG---SYGPPGPQRYPIGIQGRTPGAMAGMQYPQ-QQMPPQY 526
+SQ ++P P G + PP P I + +G + P+ PP Y
Sbjct: 922 --KKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGINLDN------SGPKLPEFSNRPPGY 973
Query: 527 GQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPS-------------QSQQRYQPQQD- 572
Q V Q P Q PP PPQ Q P QSQQ+ Q QQ
Sbjct: 974 PSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQPQSQQQQQQQQQM 1033
Query: 573 -----MSQEGYGTR------SQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGT 621
M Q+ R PP P P+ + + + Q + L G P+
Sbjct: 1034 MMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGSVPVMVSLQGPASVPPSPD 1093
Query: 622 EATLSSAVSASGSTSS-----QGDQSNPAQSPFSPHAS-PHLS-----SIPGGPSPSPVG 670
+ + V+ ++S Q NP+ SP + AS P S S+PGGP+ P
Sbjct: 1094 KQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEASGSEAPSVPGGPNNMPSH 1153
Query: 671 SPVGSNQ-----SRSGPISPASIPGSQMPPQPPGSQSESS------SHPALSQSPMPQER 719
+ NQ + GP SP S P QPP + SS + A +Q+ P+
Sbjct: 1154 VVLPQNQLMMTGPKPGP-SPLSATQGATPQQPPVNSLPSSHGHHFPNVAAPTQTSRPKTP 1212
Query: 720 GFMAGTQRNPQMAQYGPQQTGP---SMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMS-Q 775
+ PQ P T P S+SP +++A I +G + PQ++
Sbjct: 1213 NRASPRPYYPQTPNNRPPSTEPSEISLSPE-----RLNASI--------AGLFPPQINIP 1259
Query: 776 YGPQGNYSRPPAYSGVPSASYSGPG---PGMGISANNQMHGQGPSQPCGAVPLGRMPSAG 832
P+ N +R G+ + G + ++ +N Q V G+ ++G
Sbjct: 1260 LPPRPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQSNSG 1319
Query: 833 MQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGS 892
R P N SSPG S++ P G R+ +A + + N+A +
Sbjct: 1320 ATKRASPSNSRR---SSPGSSRKTTPSPG-------RQNSKAPKLTLASQTNAALLQNVE 1369
Query: 893 FPGMNQSGLMASSSPYSQP------MNNSSSLMNTQAPPYSMAP--AMVNSSAASVGL-- 942
P ++ S +P + P NNS +N Q S+A +V + S+ +
Sbjct: 1370 LP----RNVLVSPTPLANPPVPGSFPNNSG--LNPQNSTVSVAAVGGVVEDNKESLNVPQ 1423
Query: 943 -ADMMSPGESK--LPLPLKA-DGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGN--EP 996
+D + K + + LKA +E PE +SKK + K+ V E N P
Sbjct: 1424 DSDCQNSQSRKEQVNIELKAVPAQEVKMVVPEDQSKKDGQPSDP-NKLPSVEENKNLVSP 1482
Query: 997 ERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVC---VKEIGGLAQVNKNKKWRE 1053
+ ++ G+P ++ G L++ V +K+ + + +E
Sbjct: 1483 AMREAPTSLSQLLDNSGAPNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKE 1542
Query: 1054 LATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPA 1113
+ +LN+ S+ SSL + E PP + + P P
Sbjct: 1543 PSNSLNLPHSNELCSSLVHPELS-----EVSSNVAPSIPPVM---SRPVSSSSISTPLPP 1594
Query: 1114 NSGSLQGPQTPQSTGSNSMAEVPGDLK 1140
N ++ P +T +N+ A +P L+
Sbjct: 1595 NQITVFVTSNPITTSANTSAALPTHLQ 1621
Score = 62.8 bits (151), Expect = 4e-09
Identities = 215/1033 (20%), Positives = 334/1033 (32%), Gaps = 176/1033 (17%)
Query: 594 EDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHA 653
E L ++ Q L DL I + E ++ A++ + S + + A + A
Sbjct: 106 ERLRILAQSNNQQLRDLG--ILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEA 163
Query: 654 SPHLSSIPG---GPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL 710
++S PG +P+ V P G N S S ++P P ++ P+ P S+S + L
Sbjct: 164 GFPMASGPGIIRMNNPATVMIPPGGNVS-SSMMAPG--PNPELQPRTPRPASQSDAMDPL 220
Query: 711 SQSPMPQERGFMAGT---QRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSG 767
Q++ +G+ +P +Q P+ P Q QQ
Sbjct: 221 LSGLHIQQQSHPSGSLAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQ 280
Query: 768 TYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGR 827
Q+ PQ + + P G+ ++ P NQ+ P LG
Sbjct: 281 QQQQQLQARPPQQHQQQQP--QGI-RPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGT 337
Query: 828 MPS-AGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPP-MPTVNRKAQEAAAAVMQAAANS 885
M + G + P PG M + P ++ P PP P +++A +A Q
Sbjct: 338 MTANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQ----- 392
Query: 886 AQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADM 945
S G F L S P+ T P S + S AS +
Sbjct: 393 -MSNPGQFTAPQMKSLQGGPSRVPTPLQQPHL---TNKSPASSPSSFQQGSPASSPTVNQ 448
Query: 946 MSPGESKLPLPLKADGKEEGTPQPESKSKKSSSSTTTGEKITKVYELGNEPERKLWVDRY 1005
+ P P + + +G QP S ++ + + GN P + + +
Sbjct: 449 TQ--QQMGPRPPQNNPLPQGFQQPVSSPGRNP-----------MVQQGNVPPNFMVMQQ- 494
Query: 1006 LTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSS 1065
P S P +G P L + Q N N ++ + +S
Sbjct: 495 ---QPPNQGPQSLHPGLGGMPKRLPPGF-------SAGQANPNFMQGQVPSTTATTPGNS 544
Query: 1066 AASSLK-KQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTP 1124
A L+ Q +Q+ +G PP + P + PS + G
Sbjct: 545 GAPQLQANQNVQHAGG------QGAGPPQNQMQV--SHGPPNMMQPSLMG---IHGNMNN 593
Query: 1125 QSTGSNSMAEV-------PGDLKPPTPASTPHGQMTPMQGG---RSSTISVHDPFSDVSD 1174
Q G++ + +V PP+ H Q+ P QG + T++ +P +S
Sbjct: 594 QQAGTSGVPQVNLSNMQGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMI-LSR 652
Query: 1175 SSFPKRNSMTPNAPYQ------QGMSMPDVM----GRMPYEPNKDPFGGMRKVPGSSEPF 1224
+ + M N P Q Q M+ P M G P+ G +V P
Sbjct: 653 AQLMPQGQMMVNPPSQNLGPSPQRMTPPKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPM 712
Query: 1225 MTQ-------GQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPG 1277
+ Q G + Q+ N P A G Q G + GQ P
Sbjct: 713 IEQIMTNQMQGNKQQFNTQNQSNVMPGPAQIMRGPTPNMQ---GNMVQFTGQMSGQMLPQ 769
Query: 1278 QGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQY----SSQQQEMY 1333
QGP + P G + P HM +G PA D+ Q S QQ M
Sbjct: 770 QGPVNNSPSQVMGIQGQVLRPPGPSPHMAQQHGDPATTANNDVSLSQMMPDVSIQQTNMV 829
Query: 1334 NQY----------GGSYSGPD---RRPIQGQYPYPYSRERMQGPGQIQTHGIP--PQMMG 1378
+ G +SG P G P Q PG + ++
Sbjct: 830 PPHVQAMQGNSASGNHFSGHGMSFNAPFSGA-PNGNQMSCGQNPGFPVNKDVTLTSPLLV 888
Query: 1379 GPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQA-PPYPGMNRTDDMMVPDQRINH 1437
LQS S G + N QN P + PP N D+ PD R
Sbjct: 889 NLLQSDISAGH----FGVNNK-----QNNTNANKPKKKKPPRKKKNSQQDLNTPDTR--- 936
Query: 1438 ESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQ------TPPSLPNHISRAPSPASF--- 1488
A ++ +PP P Q + P LP +R P S
Sbjct: 937 -----------------PAGLEEADQPPLPGEQGINLDNSGPKLPEFSNRPPGYPSQPVE 979
Query: 1489 QRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQP------PPIRREITFPPGSV 1542
QR L+ +P MQ V PPPQP P + ++ PP S
Sbjct: 980 QRPLQQ---------MPPQLMQHV----------APPPQPPQQQPQPQLPQQQQPPPPSQ 1020
Query: 1543 EASQPVLKQRRKI 1555
SQ +Q++++
Sbjct: 1021 PQSQQQQQQQQQM 1033
Score = 60.5 bits (145), Expect = 2e-08
Identities = 167/785 (21%), Positives = 249/785 (31%), Gaps = 162/785 (20%)
Query: 329 AASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAP 388
A+S S GS A Q Q G P N L S G P + P
Sbjct: 429 ASSPSSFQQGSPASS--PTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMVQQGNVP 486
Query: 389 P--------PPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSH 440
P PP PQS G GM G A+P + Q S
Sbjct: 487 PNFMVMQQQPPNQGPQSLHPGLG----------GMPKRLPPGFSAGQANPNFMQGQVPST 536
Query: 441 PAMSPGTPGPTM-----------GRSQGSPMDPMV-------MKRPQLYGMGSNPHSQPQ 482
A +PG G G+ G P + M M +P L G+ N ++Q
Sbjct: 537 TATTPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQA 596
Query: 483 QSSPYPGGSYG--PPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQ 540
+S P + PQ+ P P + GM QQ+ P GQ QQG
Sbjct: 597 GTSGVPQVNLSNMQGQPQQGP-------PSQLMGMH---QQIVPSQGQM----VQQQG-- 640
Query: 541 PYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQ 600
+ PQ P + +AQ +P P Q++ R PP ++
Sbjct: 641 ---TLNPQNPMILSRAQLMPQGQMMVNPPSQNLGPSPQ--RMTPPK----------QMLS 685
Query: 601 QERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSI 660
Q+ P + + + P G + + T+ + + P + I
Sbjct: 686 QQGPQMMAPHNQMMG--PQGQVLLQQNPMIEQIMTNQMQGNKQQFNTQNQSNVMPGPAQI 743
Query: 661 PGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERG 720
GP+P+ G+ V SG + P P + P Q G Q + P S M Q+ G
Sbjct: 744 MRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNNSPSQVMGIQGQVLRPPGPSPH-MAQQHG 802
Query: 721 FMAGTQRN-----PQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQ 775
A T N M QQT + PH + + Q +++SG + S
Sbjct: 803 DPATTANNDVSLSQMMPDVSIQQTN-MVPPH----------VQAMQGNSASGNH---FSG 848
Query: 776 YGPQGNYSRPPAYSGVPSASY--SGPGPGMGIS------------------------ANN 809
+G N +SG P+ + G PG ++ NN
Sbjct: 849 HGMSFN----APFSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHFGVNN 904
Query: 810 QMHGQGPSQPCGAVPLGRMPS------------AGMQNR---PFPG----NMSSMTPSSP 850
+ + ++P P + + AG++ P PG N+ + P P
Sbjct: 905 KQNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGINLDNSGPKLP 964
Query: 851 GMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ-SRQGSFPGMNQSGLMASSSPYS 909
S + P P P R Q+ +MQ A Q +Q P + Q P S
Sbjct: 965 EFSNR--PPGYPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQ---QQQPPPPS 1019
Query: 910 QPMNNSSS---------LMNTQAPPYSMAPAMVN----SSAASVGLADMMSPGESKLPLP 956
QP + LM Q P P N + M +P+
Sbjct: 1020 QPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGSVPVM 1079
Query: 957 LKADGKEEGTPQPESKSKKSSSSTTTGEKITK-VYELGNEPERKLWVDRYLTFMEERGSP 1015
+ G P P+ + +T G K VY+ + + + E GS
Sbjct: 1080 VSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEASGSE 1139
Query: 1016 VSSLP 1020
S+P
Sbjct: 1140 APSVP 1144
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 100 bits (250), Expect = 1e-20
Identities = 244/970 (25%), Positives = 310/970 (31%), Gaps = 198/970 (20%)
Query: 63 QQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS 122
Q+ Q Q QQ I+ G G +PGP + P GAK + G P GP +
Sbjct: 524 QEAQAQAILQQARIALRGPPGPMGLTG-RPGP-VGGPGSSGAKGES--GDPGPQGPRGVQ 579
Query: 123 KPGDEDDAPPKMGEPA--GGRYEHPGLGALGT-----------------QQPPVAVPGGG 163
P P K G P GGR GA G ++ P PG
Sbjct: 580 GPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPP 639
Query: 164 GGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMD 223
G E P GP G GP G +PG M G G+M
Sbjct: 640 GDDGMRGEDGEIGPRGLPGEAGPRGLLGP----RGTPGAPGQPGMAGVDGPP-GPKGNMG 694
Query: 224 PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGG--GGGGGSGGGGGGGGAGAGGAGAGAV 281
P G P Q N PG G G G G G G G G AG GA
Sbjct: 695 P--QGEPGPPGQQGN-------PGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGAD---- 741
Query: 282 AAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGP----GGGGAASLSKAAA 337
G G G G S G L P QG GP G G L +
Sbjct: 742 -----------GPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKG 790
Query: 338 GSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQS 397
GF F G + G + Q+ G PE A P P
Sbjct: 791 EKGEDGFPGFKG-DMGLKGDRGEVGQI--------GPRGEDGPEGPKGRAGPTGDPGPSG 841
Query: 398 QAAAAGAAA-------GGQQAAAGM-------GLGKDMGAQYAAASPAWAAAQQRSHPAM 443
QA G G+Q G G + GA+ A P + + P
Sbjct: 842 QAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRG 901
Query: 444 SPGTPGPT-----MGRSQGS-PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGP 497
S G GPT G S G P P + PQ PQ +PG GPPGP
Sbjct: 902 SRGARGPTGKPGPKGTSGGDGPPGPPGERGPQ----------GPQGPVGFPGPK-GPPGP 950
Query: 498 -----------QRYPIGIQGRT----PGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPY 542
QR G QG+T PG + G Q P + P G++G
Sbjct: 951 PGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGP-IGERG------------ 997
Query: 543 YSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDL------ 596
P PP PP Q LP + + + D +G + P G P L
Sbjct: 998 ---HPGPPG-PPGEQGLPGAAGKE-GAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGA 1052
Query: 597 -NLIQQERPSSLPDLSGSIDDLPTGTEAT---LSSAVSASGSTSSQGDQSNPAQS-PFSP 651
L E P P GS + + A L G G++ P + P P
Sbjct: 1053 PGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGP 1112
Query: 652 HASPHLSSIPGGPSPS-PVGSPVGSNQSRSGPISPASIPGSQM------PPQPPGSQSES 704
+ G P P+ P GSP G I GS+ PP PPG Q
Sbjct: 1113 AGRDGVQGPVGLPGPAGPAGSP--GEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPV 1170
Query: 705 SSHPALSQS---PMPQERGFMAGTQRNPQMAQYGPQQTGP-SMSPHPSPGGQM--HAGIS 758
+ P ++ P P+ + M G Q+ + A+ P GP + P P G+ + +
Sbjct: 1171 GA-PGIAGGDGEPGPRGQQGMFG-QKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVG 1228
Query: 759 SFQQSNSSGTYGPQ--MSQYGPQGNYSRPPAYSGVPSASYSG----PGPG--MGISANNQ 810
G GPQ GPQG + GV G PGP G+
Sbjct: 1229 PMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKG 1288
Query: 811 MHGQ-GPSQPCGAV--PLGRMPSA--GMQNRP----FPGNMSSMTPSSPGMSQQGGPG-- 859
G+ G + P GA P + P G + P FPG+ P PG + Q G G
Sbjct: 1289 ERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGP--PGEPGPAGQDGVGGD 1346
Query: 860 ------------------MGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGL 901
GPP P R AA A + A+ G+ ++G
Sbjct: 1347 KGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGP 1406
Query: 902 MASSSPYSQP 911
+ P +P
Sbjct: 1407 VGPQGPAGKP 1416
Score = 89.4 bits (220), Expect = 4e-17
Identities = 238/1003 (23%), Positives = 303/1003 (30%), Gaps = 225/1003 (22%)
Query: 83 GGAGGGAPQ--PGPDMEQPQHGGAKDSAAGGQADPPG-------PPLLSKPGDEDDAPPK 133
G G PQ PGP +Q G G PPG P L PG D PP
Sbjct: 688 GPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGA--DGPPG 745
Query: 134 MGEPAGGRYEHPGLGALGTQQP-----PVAVPGGGG-----------GPAAVPEFNNYYG 177
G E LG G Q P P V G G G P F G
Sbjct: 746 HPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMG 805
Query: 178 -------------SAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
GP GRAGP D Q+ G + G PG
Sbjct: 806 LKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKL--------GVPG---- 853
Query: 225 LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG--GGSGGGGGGGGAGAGGAGAGAVA 282
PGY PG G G G G G +G G G AG G
Sbjct: 854 ---------------LPGY--PGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGP 896
Query: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAG 342
+ A G G G G+S G G P ++G GP G G
Sbjct: 897 TGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGK--- 953
Query: 343 GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYG--------GSYPEYSSPSAPPPPPSQ 394
G HP T Q T P G G E P P PP Q
Sbjct: 954 -----DGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQ 1008
Query: 395 PQSQAAAAGAAAG--------GQQAAAGM-GLGKDMGAQYAAASPAWAAAQQRSHPAMSP 445
AA A G G+ AG+ G + G A +P + P
Sbjct: 1009 GLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPV 1068
Query: 446 GTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQ--RYPIG 503
G+PG P+ P G P ++ +P G GP G + P+G
Sbjct: 1069 GSPGERGSAGTAGPIG-----LPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVG 1123
Query: 504 IQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQ-----PQPPHL--PPQA 556
+ G P AG P + G +G G + GQ+ + P PP L P A
Sbjct: 1124 LPG--PAGPAG-------SPGEDGDKGEIG--EPGQKGSKGDKGENGPPGPPGLQGPVGA 1172
Query: 557 QYL--------PSQSQQRYQPQQDMSQEGYGTRSQP---PLAPGKPNHEDLN-LIQQERP 604
+ P Q + + D G+ P PG P + N + P
Sbjct: 1173 PGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGP 1232
Query: 605 SSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGP 664
P G P G + S GS G++ P + + PG P
Sbjct: 1233 PGPPGPRG--PQGPNGADGPQGPPGSV-GSVGGVGEKGEPGE-----------AGNPGPP 1278
Query: 665 SPSPVGSPVG--SNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFM 722
+ VG P G + +GP A PG++ PP G + P GF
Sbjct: 1279 GEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGN------------PGPVGF- 1325
Query: 723 AGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSN--SSGTYGPQMSQYGPQG 780
P GP P P GQ G + + G GP + GP G
Sbjct: 1326 -------------PGDPGP--PGEPGPAGQDGVGGDKGEDGDPGQPGPPGPS-GEAGPPG 1369
Query: 781 NYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAV----PLGRMPSAGMQNR 836
PP G P A+ G A + +GP G V P G+ G++
Sbjct: 1370 ----PPGKRGPPGAA-GAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGI 1424
Query: 837 PFPGNMSSMTPSSPGMSQQGGP--GMGPP-MP-------TVNRKAQEAAAAVMQAAANSA 886
P P + PG + Q GP MGPP +P + K ++
Sbjct: 1425 PGPVGEQGL----PGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQG 1480
Query: 887 QSRQGSFPGMNQS-------GLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAAS 939
+ PG S G+ + P P PP P + S
Sbjct: 1481 EKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPP-----------GPPGLPGPQGPKGNKGS 1529
Query: 940 VGLADMMSPGESKLPLPLKADGK--EEGTPQPESKSKKSSSST 980
G A G+S LP P + G E P P SKK+ T
Sbjct: 1530 TGPAG--QKGDSGLPGPPGSPGPPGEVIQPLPILSSKKTRRHT 1570
Score = 88.2 bits (217), Expect = 8e-17
Identities = 205/839 (24%), Positives = 260/839 (30%), Gaps = 163/839 (19%)
Query: 67 QQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGD 126
+ ++ + P S N G G A + HG A G+ G P + +PG
Sbjct: 397 EYKEYEDKPTSPPNEEFGPGVPAETDITETSINGHG------AYGEKGQKGEPAVVEPGM 450
Query: 127 EDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG--GGGGPAAVPEFNNYYGSAAPAS- 183
+ PP PA G PGL Q P PG G GP P G P
Sbjct: 451 LVEGPPGPAGPA-GIMGPPGL------QGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGT 503
Query: 184 --------GGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNS 235
GG G + GP Q++ ++ A A G PG M
Sbjct: 504 MLMLPFRYGGDGSK-GPTI---SAQEAQAQAILQQARIALRGPPGPMGLT---------- 549
Query: 236 QCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
RPG GG G G G SG G G G G A GG
Sbjct: 550 --------GRPGP-VGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGR 600
Query: 296 GGGGYGGSSA--GY-GVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQ 352
G G G+ G+ G+ P +G GP G G G
Sbjct: 601 GMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGE-----IGPRG 655
Query: 353 HPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAA 412
P A P LL P P P QP A G
Sbjct: 656 LPGEAGP--RGLL------------------GPRGTPGAPGQP------GMAGVDGPPGP 689
Query: 413 AGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYG 472
G +MG Q P Q P PG GP G P + +P L G
Sbjct: 690 KG-----NMGPQ---GEPGPPGQQGNPGPQGLPGPQGPI-----GPPGEKGPQGKPGLAG 736
Query: 473 M--GSNPHSQP-QQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQ 529
+ P P ++ G+ GPPGPQ PIG G A + + G+
Sbjct: 737 LPGADGPPGHPGKEGQSGEKGALGPPGPQG-PIGYPGPRGVKGADGVRGLKGSKGEKGED 795
Query: 530 GVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPG 589
G G+ +G + + + P+ + P + R P D G PG
Sbjct: 796 GFPGF--KGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPG 853
Query: 590 KPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPA---- 645
P + P G P G+ A+G ++G P
Sbjct: 854 LPGY--------------PGRQG-----PKGSTG-FPGFPGANGEKGARGVAGKPGPRGQ 893
Query: 646 QSPFSPHASPHLSSIPGGPSP-------SPVGSPVGSNQSRSGPISPASIPGSQMPPQPP 698
+ P P S G P P P G P + GP P PG + PP PP
Sbjct: 894 RGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPP--GERGPQGPQGPVGFPGPKGPPGPP 951
Query: 699 GSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQ----QTGP-SMSPHPSPGGQM 753
G HP E GF T GPQ +TGP HP P G
Sbjct: 952 GKDG-LPGHPG-----QRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPP 1005
Query: 754 -HAGI-SSFQQSNSSGTYGPQ--MSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANN 809
G+ + + + G GPQ + GP G P G+P A PG+
Sbjct: 1006 GEQGLPGAAGKEGAKGDPGPQGISGKDGPAG-LRGFPGERGLPGAQ---GAPGL------ 1055
Query: 810 QMHGQGPSQPCGAV-PLGRMPSAGMQNR-PFPGNMSSMTPSSPGMSQQGGPG-MGPPMP 865
G+GP P G V G SAG PG P P ++G PG GP P
Sbjct: 1056 -KGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPA-GEKGAPGEKGPQGP 1112
Score = 78.6 bits (192), Expect = 6e-14
Identities = 152/620 (24%), Positives = 191/620 (30%), Gaps = 110/620 (17%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGR 141
L G G PGP + G A + G PGP P E AP + G P G
Sbjct: 1055 LKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKG-PQGPA 1113
Query: 142 YEHPGLGALGTQQP--PVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAG-----PCF 194
G +G P P PG G + E GP G G
Sbjct: 1114 GRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAP 1173
Query: 195 DQHGGQQSPG----MGMM-HSASAAAAGAPGSMDPL-QNSHEGYPNSQCNH-------YP 241
GG PG GM A G PG P+ G P + + P
Sbjct: 1174 GIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPP 1233
Query: 242 GYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG 301
G P G G G G G G GG G G A A G G G
Sbjct: 1234 GPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEK 1293
Query: 302 GSSAGYGVLSSPRQQG----------GGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN 351
G + G P +G G + PG G A GG + G++
Sbjct: 1294 GEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDK---GED 1350
Query: 352 QHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQA 411
P P P P S + PP PP + AA G++
Sbjct: 1351 GDPG-----------QPGP---------PGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKG 1390
Query: 412 AAG-------MGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMV 464
A G G +G Q A P + P G PG PM P
Sbjct: 1391 AKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGP-- 1448
Query: 465 MKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQ-----RYPIGIQGRTPGAMAGMQYPQ 519
P L G+ +P S+ ++ P G GPPG Q R G QG +PGA P
Sbjct: 1449 ---PGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQG-SPGAKGDGGIP- 1503
Query: 520 QQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLP-PQAQYLPSQSQQRYQPQQDMSQEGY 578
G G G P PP LP PQ P ++ P Q+G
Sbjct: 1504 -------GPAGPLG------------PPGPPGLPGPQG---PKGNKGSTGP---AGQKGD 1538
Query: 579 GTRSQPPLAPGKPNH--EDLNLIQQER-----PSSLPDLSGSIDDLPTGTEATLSSAVSA 631
PP +PG P + L ++ ++ D +I D G E S S
Sbjct: 1539 SGLPGPPGSPGPPGEVIQPLPILSSKKTRRHTEGMQADADDNILDYSDGMEEIFGSLNSL 1598
Query: 632 SGSTS----SQGDQSNPAQS 647
G Q+NPA++
Sbjct: 1599 KQDIEHMKFPMGTQTNPART 1618
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 100 bits (250), Expect = 1e-20
Identities = 244/970 (25%), Positives = 310/970 (31%), Gaps = 198/970 (20%)
Query: 63 QQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS 122
Q+ Q Q QQ I+ G G +PGP + P GAK + G P GP +
Sbjct: 473 QEAQAQAILQQARIALRGPPGPMGLTG-RPGP-VGGPGSSGAKGES--GDPGPQGPRGVQ 528
Query: 123 KPGDEDDAPPKMGEPA--GGRYEHPGLGALGT-----------------QQPPVAVPGGG 163
P P K G P GGR GA G ++ P PG
Sbjct: 529 GPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPP 588
Query: 164 GGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMD 223
G E P GP G GP G +PG M G G+M
Sbjct: 589 GDDGMRGEDGEIGPRGLPGEAGPRGLLGP----RGTPGAPGQPGMAGVDGPP-GPKGNMG 643
Query: 224 PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGG--GGGGGSGGGGGGGGAGAGGAGAGAV 281
P G P Q N PG G G G G G G G G AG GA
Sbjct: 644 P--QGEPGPPGQQGN-------PGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGAD---- 690
Query: 282 AAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGP----GGGGAASLSKAAA 337
G G G G S G L P QG GP G G L +
Sbjct: 691 -----------GPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKG 739
Query: 338 GSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQS 397
GF F G + G + Q+ G PE A P P
Sbjct: 740 EKGEDGFPGFKG-DMGLKGDRGEVGQI--------GPRGEDGPEGPKGRAGPTGDPGPSG 790
Query: 398 QAAAAGAAA-------GGQQAAAGM-------GLGKDMGAQYAAASPAWAAAQQRSHPAM 443
QA G G+Q G G + GA+ A P + + P
Sbjct: 791 QAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRG 850
Query: 444 SPGTPGPT-----MGRSQGS-PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGP 497
S G GPT G S G P P + PQ PQ +PG GPPGP
Sbjct: 851 SRGARGPTGKPGPKGTSGGDGPPGPPGERGPQ----------GPQGPVGFPGPK-GPPGP 899
Query: 498 -----------QRYPIGIQGRT----PGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPY 542
QR G QG+T PG + G Q P + P G++G
Sbjct: 900 PGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGP-IGERG------------ 946
Query: 543 YSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDL------ 596
P PP PP Q LP + + + D +G + P G P L
Sbjct: 947 ---HPGPPG-PPGEQGLPGAAGKE-GAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGA 1001
Query: 597 -NLIQQERPSSLPDLSGSIDDLPTGTEAT---LSSAVSASGSTSSQGDQSNPAQS-PFSP 651
L E P P GS + + A L G G++ P + P P
Sbjct: 1002 PGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGP 1061
Query: 652 HASPHLSSIPGGPSPS-PVGSPVGSNQSRSGPISPASIPGSQM------PPQPPGSQSES 704
+ G P P+ P GSP G I GS+ PP PPG Q
Sbjct: 1062 AGRDGVQGPVGLPGPAGPAGSP--GEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPV 1119
Query: 705 SSHPALSQS---PMPQERGFMAGTQRNPQMAQYGPQQTGP-SMSPHPSPGGQM--HAGIS 758
+ P ++ P P+ + M G Q+ + A+ P GP + P P G+ + +
Sbjct: 1120 GA-PGIAGGDGEPGPRGQQGMFG-QKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVG 1177
Query: 759 SFQQSNSSGTYGPQ--MSQYGPQGNYSRPPAYSGVPSASYSG----PGPG--MGISANNQ 810
G GPQ GPQG + GV G PGP G+
Sbjct: 1178 PMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKG 1237
Query: 811 MHGQ-GPSQPCGAV--PLGRMPSA--GMQNRP----FPGNMSSMTPSSPGMSQQGGPG-- 859
G+ G + P GA P + P G + P FPG+ P PG + Q G G
Sbjct: 1238 ERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGP--PGEPGPAGQDGVGGD 1295
Query: 860 ------------------MGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGL 901
GPP P R AA A + A+ G+ ++G
Sbjct: 1296 KGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGP 1355
Query: 902 MASSSPYSQP 911
+ P +P
Sbjct: 1356 VGPQGPAGKP 1365
Score = 89.4 bits (220), Expect = 4e-17
Identities = 238/1003 (23%), Positives = 303/1003 (30%), Gaps = 225/1003 (22%)
Query: 83 GGAGGGAPQ--PGPDMEQPQHGGAKDSAAGGQADPPG-------PPLLSKPGDEDDAPPK 133
G G PQ PGP +Q G G PPG P L PG D PP
Sbjct: 637 GPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGA--DGPPG 694
Query: 134 MGEPAGGRYEHPGLGALGTQQP-----PVAVPGGGG-----------GPAAVPEFNNYYG 177
G E LG G Q P P V G G G P F G
Sbjct: 695 HPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMG 754
Query: 178 -------------SAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
GP GRAGP D Q+ G + G PG
Sbjct: 755 LKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKL--------GVPG---- 802
Query: 225 LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG--GGSGGGGGGGGAGAGGAGAGAVA 282
PGY PG G G G G G +G G G AG G
Sbjct: 803 ---------------LPGY--PGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGP 845
Query: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAG 342
+ A G G G G+S G G P ++G GP G G
Sbjct: 846 TGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGK--- 902
Query: 343 GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYG--------GSYPEYSSPSAPPPPPSQ 394
G HP T Q T P G G E P P PP Q
Sbjct: 903 -----DGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQ 957
Query: 395 PQSQAAAAGAAAG--------GQQAAAGM-GLGKDMGAQYAAASPAWAAAQQRSHPAMSP 445
AA A G G+ AG+ G + G A +P + P
Sbjct: 958 GLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPV 1017
Query: 446 GTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQ--RYPIG 503
G+PG P+ P G P ++ +P G GP G + P+G
Sbjct: 1018 GSPGERGSAGTAGPIG-----LPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVG 1072
Query: 504 IQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQ-----PQPPHL--PPQA 556
+ G P AG P + G +G G + GQ+ + P PP L P A
Sbjct: 1073 LPG--PAGPAG-------SPGEDGDKGEIG--EPGQKGSKGDKGENGPPGPPGLQGPVGA 1121
Query: 557 QYL--------PSQSQQRYQPQQDMSQEGYGTRSQP---PLAPGKPNHEDLN-LIQQERP 604
+ P Q + + D G+ P PG P + N + P
Sbjct: 1122 PGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGP 1181
Query: 605 SSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGP 664
P G P G + S GS G++ P + + PG P
Sbjct: 1182 PGPPGPRG--PQGPNGADGPQGPPGSV-GSVGGVGEKGEPGE-----------AGNPGPP 1227
Query: 665 SPSPVGSPVG--SNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFM 722
+ VG P G + +GP A PG++ PP G + P GF
Sbjct: 1228 GEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGN------------PGPVGF- 1274
Query: 723 AGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSN--SSGTYGPQMSQYGPQG 780
P GP P P GQ G + + G GP + GP G
Sbjct: 1275 -------------PGDPGP--PGEPGPAGQDGVGGDKGEDGDPGQPGPPGPS-GEAGPPG 1318
Query: 781 NYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAV----PLGRMPSAGMQNR 836
PP G P A+ G A + +GP G V P G+ G++
Sbjct: 1319 ----PPGKRGPPGAA-GAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGI 1373
Query: 837 PFPGNMSSMTPSSPGMSQQGGP--GMGPP-MP-------TVNRKAQEAAAAVMQAAANSA 886
P P + PG + Q GP MGPP +P + K ++
Sbjct: 1374 PGPVGEQGL----PGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQG 1429
Query: 887 QSRQGSFPGMNQS-------GLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAAS 939
+ PG S G+ + P P PP P + S
Sbjct: 1430 EKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPP-----------GPPGLPGPQGPKGNKGS 1478
Query: 940 VGLADMMSPGESKLPLPLKADGK--EEGTPQPESKSKKSSSST 980
G A G+S LP P + G E P P SKK+ T
Sbjct: 1479 TGPAG--QKGDSGLPGPPGSPGPPGEVIQPLPILSSKKTRRHT 1519
Score = 88.2 bits (217), Expect = 8e-17
Identities = 205/839 (24%), Positives = 260/839 (30%), Gaps = 163/839 (19%)
Query: 67 QQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGD 126
+ ++ + P S N G G A + HG A G+ G P + +PG
Sbjct: 346 EYKEYEDKPTSPPNEEFGPGVPAETDITETSINGHG------AYGEKGQKGEPAVVEPGM 399
Query: 127 EDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG--GGGGPAAVPEFNNYYGSAAPAS- 183
+ PP PA G PGL Q P PG G GP P G P
Sbjct: 400 LVEGPPGPAGPA-GIMGPPGL------QGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGT 452
Query: 184 --------GGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNS 235
GG G + GP Q++ ++ A A G PG M
Sbjct: 453 MLMLPFRYGGDGSK-GPTI---SAQEAQAQAILQQARIALRGPPGPMGLT---------- 498
Query: 236 QCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
RPG GG G G G SG G G G G A GG
Sbjct: 499 --------GRPGP-VGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGR 549
Query: 296 GGGGYGGSSA--GY-GVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQ 352
G G G+ G+ G+ P +G GP G G G
Sbjct: 550 GMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGE-----IGPRG 604
Query: 353 HPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAA 412
P A P LL P P P QP A G
Sbjct: 605 LPGEAGP--RGLL------------------GPRGTPGAPGQP------GMAGVDGPPGP 638
Query: 413 AGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYG 472
G +MG Q P Q P PG GP G P + +P L G
Sbjct: 639 KG-----NMGPQ---GEPGPPGQQGNPGPQGLPGPQGPI-----GPPGEKGPQGKPGLAG 685
Query: 473 M--GSNPHSQP-QQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQ 529
+ P P ++ G+ GPPGPQ PIG G A + + G+
Sbjct: 686 LPGADGPPGHPGKEGQSGEKGALGPPGPQG-PIGYPGPRGVKGADGVRGLKGSKGEKGED 744
Query: 530 GVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPG 589
G G+ +G + + + P+ + P + R P D G PG
Sbjct: 745 GFPGF--KGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPG 802
Query: 590 KPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPA---- 645
P + P G P G+ A+G ++G P
Sbjct: 803 LPGY--------------PGRQG-----PKGSTG-FPGFPGANGEKGARGVAGKPGPRGQ 842
Query: 646 QSPFSPHASPHLSSIPGGPSP-------SPVGSPVGSNQSRSGPISPASIPGSQMPPQPP 698
+ P P S G P P P G P + GP P PG + PP PP
Sbjct: 843 RGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPP--GERGPQGPQGPVGFPGPKGPPGPP 900
Query: 699 GSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQ----QTGP-SMSPHPSPGGQM 753
G HP E GF T GPQ +TGP HP P G
Sbjct: 901 GKDG-LPGHPG-----QRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPP 954
Query: 754 -HAGI-SSFQQSNSSGTYGPQ--MSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANN 809
G+ + + + G GPQ + GP G P G+P A PG+
Sbjct: 955 GEQGLPGAAGKEGAKGDPGPQGISGKDGPAG-LRGFPGERGLPGAQ---GAPGL------ 1004
Query: 810 QMHGQGPSQPCGAV-PLGRMPSAGMQNR-PFPGNMSSMTPSSPGMSQQGGPG-MGPPMP 865
G+GP P G V G SAG PG P P ++G PG GP P
Sbjct: 1005 -KGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPA-GEKGAPGEKGPQGP 1061
Score = 78.6 bits (192), Expect = 6e-14
Identities = 152/620 (24%), Positives = 191/620 (30%), Gaps = 110/620 (17%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGR 141
L G G PGP + G A + G PGP P E AP + G P G
Sbjct: 1004 LKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKG-PQGPA 1062
Query: 142 YEHPGLGALGTQQP--PVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAG-----PCF 194
G +G P P PG G + E GP G G
Sbjct: 1063 GRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAP 1122
Query: 195 DQHGGQQSPG----MGMM-HSASAAAAGAPGSMDPL-QNSHEGYPNSQCNH-------YP 241
GG PG GM A G PG P+ G P + + P
Sbjct: 1123 GIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPP 1182
Query: 242 GYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG 301
G P G G G G G G GG G G A A G G G
Sbjct: 1183 GPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEK 1242
Query: 302 GSSAGYGVLSSPRQQG----------GGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN 351
G + G P +G G + PG G A GG + G++
Sbjct: 1243 GEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDK---GED 1299
Query: 352 QHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQA 411
P P P P S + PP PP + AA G++
Sbjct: 1300 GDPG-----------QPGP---------PGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKG 1339
Query: 412 AAG-------MGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMV 464
A G G +G Q A P + P G PG PM P
Sbjct: 1340 AKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGP-- 1397
Query: 465 MKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQ-----RYPIGIQGRTPGAMAGMQYPQ 519
P L G+ +P S+ ++ P G GPPG Q R G QG +PGA P
Sbjct: 1398 ---PGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQG-SPGAKGDGGIP- 1452
Query: 520 QQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLP-PQAQYLPSQSQQRYQPQQDMSQEGY 578
G G G P PP LP PQ P ++ P Q+G
Sbjct: 1453 -------GPAGPLG------------PPGPPGLPGPQG---PKGNKGSTGP---AGQKGD 1487
Query: 579 GTRSQPPLAPGKPNH--EDLNLIQQER-----PSSLPDLSGSIDDLPTGTEATLSSAVSA 631
PP +PG P + L ++ ++ D +I D G E S S
Sbjct: 1488 SGLPGPPGSPGPPGEVIQPLPILSSKKTRRHTEGMQADADDNILDYSDGMEEIFGSLNSL 1547
Query: 632 SGSTS----SQGDQSNPAQS 647
G Q+NPA++
Sbjct: 1548 KQDIEHMKFPMGTQTNPART 1567
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 100 bits (250), Expect = 1e-20
Identities = 244/970 (25%), Positives = 310/970 (31%), Gaps = 198/970 (20%)
Query: 63 QQQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS 122
Q+ Q Q QQ I+ G G +PGP + P GAK + G P GP +
Sbjct: 512 QEAQAQAILQQARIALRGPPGPMGLTG-RPGP-VGGPGSSGAKGES--GDPGPQGPRGVQ 567
Query: 123 KPGDEDDAPPKMGEPA--GGRYEHPGLGALGT-----------------QQPPVAVPGGG 163
P P K G P GGR GA G ++ P PG
Sbjct: 568 GPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPP 627
Query: 164 GGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMD 223
G E P GP G GP G +PG M G G+M
Sbjct: 628 GDDGMRGEDGEIGPRGLPGEAGPRGLLGP----RGTPGAPGQPGMAGVDGPP-GPKGNMG 682
Query: 224 PLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGG--GGGGGSGGGGGGGGAGAGGAGAGAV 281
P G P Q N PG G G G G G G G G AG GA
Sbjct: 683 P--QGEPGPPGQQGN-------PGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGAD---- 729
Query: 282 AAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGP----GGGGAASLSKAAA 337
G G G G S G L P QG GP G G L +
Sbjct: 730 -----------GPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKG 778
Query: 338 GSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQS 397
GF F G + G + Q+ G PE A P P
Sbjct: 779 EKGEDGFPGFKG-DMGLKGDRGEVGQI--------GPRGEDGPEGPKGRAGPTGDPGPSG 829
Query: 398 QAAAAGAAA-------GGQQAAAGM-------GLGKDMGAQYAAASPAWAAAQQRSHPAM 443
QA G G+Q G G + GA+ A P + + P
Sbjct: 830 QAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRG 889
Query: 444 SPGTPGPT-----MGRSQGS-PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGP 497
S G GPT G S G P P + PQ PQ +PG GPPGP
Sbjct: 890 SRGARGPTGKPGPKGTSGGDGPPGPPGERGPQ----------GPQGPVGFPGPK-GPPGP 938
Query: 498 -----------QRYPIGIQGRT----PGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPY 542
QR G QG+T PG + G Q P + P G++G
Sbjct: 939 PGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGP-IGERG------------ 985
Query: 543 YSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDL------ 596
P PP PP Q LP + + + D +G + P G P L
Sbjct: 986 ---HPGPPG-PPGEQGLPGAAGKE-GAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGA 1040
Query: 597 -NLIQQERPSSLPDLSGSIDDLPTGTEAT---LSSAVSASGSTSSQGDQSNPAQS-PFSP 651
L E P P GS + + A L G G++ P + P P
Sbjct: 1041 PGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGP 1100
Query: 652 HASPHLSSIPGGPSPS-PVGSPVGSNQSRSGPISPASIPGSQM------PPQPPGSQSES 704
+ G P P+ P GSP G I GS+ PP PPG Q
Sbjct: 1101 AGRDGVQGPVGLPGPAGPAGSP--GEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPV 1158
Query: 705 SSHPALSQS---PMPQERGFMAGTQRNPQMAQYGPQQTGP-SMSPHPSPGGQM--HAGIS 758
+ P ++ P P+ + M G Q+ + A+ P GP + P P G+ + +
Sbjct: 1159 GA-PGIAGGDGEPGPRGQQGMFG-QKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVG 1216
Query: 759 SFQQSNSSGTYGPQ--MSQYGPQGNYSRPPAYSGVPSASYSG----PGPG--MGISANNQ 810
G GPQ GPQG + GV G PGP G+
Sbjct: 1217 PMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKG 1276
Query: 811 MHGQ-GPSQPCGAV--PLGRMPSA--GMQNRP----FPGNMSSMTPSSPGMSQQGGPG-- 859
G+ G + P GA P + P G + P FPG+ P PG + Q G G
Sbjct: 1277 ERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGP--PGEPGPAGQDGVGGD 1334
Query: 860 ------------------MGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGL 901
GPP P R AA A + A+ G+ ++G
Sbjct: 1335 KGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGP 1394
Query: 902 MASSSPYSQP 911
+ P +P
Sbjct: 1395 VGPQGPAGKP 1404
Score = 89.4 bits (220), Expect = 4e-17
Identities = 238/1003 (23%), Positives = 303/1003 (30%), Gaps = 225/1003 (22%)
Query: 83 GGAGGGAPQ--PGPDMEQPQHGGAKDSAAGGQADPPG-------PPLLSKPGDEDDAPPK 133
G G PQ PGP +Q G G PPG P L PG D PP
Sbjct: 676 GPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGA--DGPPG 733
Query: 134 MGEPAGGRYEHPGLGALGTQQP-----PVAVPGGGG-----------GPAAVPEFNNYYG 177
G E LG G Q P P V G G G P F G
Sbjct: 734 HPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMG 793
Query: 178 -------------SAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDP 224
GP GRAGP D Q+ G + G PG
Sbjct: 794 LKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKL--------GVPG---- 841
Query: 225 LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG--GGSGGGGGGGGAGAGGAGAGAVA 282
PGY PG G G G G G +G G G AG G
Sbjct: 842 ---------------LPGY--PGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGP 884
Query: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAG 342
+ A G G G G+S G G P ++G GP G G
Sbjct: 885 TGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGK--- 941
Query: 343 GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYG--------GSYPEYSSPSAPPPPPSQ 394
G HP T Q T P G G E P P PP Q
Sbjct: 942 -----DGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQ 996
Query: 395 PQSQAAAAGAAAG--------GQQAAAGM-GLGKDMGAQYAAASPAWAAAQQRSHPAMSP 445
AA A G G+ AG+ G + G A +P + P
Sbjct: 997 GLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPV 1056
Query: 446 GTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQ--RYPIG 503
G+PG P+ P G P ++ +P G GP G + P+G
Sbjct: 1057 GSPGERGSAGTAGPIG-----LPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVG 1111
Query: 504 IQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQ-----PQPPHL--PPQA 556
+ G P AG P + G +G G + GQ+ + P PP L P A
Sbjct: 1112 LPG--PAGPAG-------SPGEDGDKGEIG--EPGQKGSKGDKGENGPPGPPGLQGPVGA 1160
Query: 557 QYL--------PSQSQQRYQPQQDMSQEGYGTRSQP---PLAPGKPNHEDLN-LIQQERP 604
+ P Q + + D G+ P PG P + N + P
Sbjct: 1161 PGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGP 1220
Query: 605 SSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGP 664
P G P G + S GS G++ P + + PG P
Sbjct: 1221 PGPPGPRG--PQGPNGADGPQGPPGSV-GSVGGVGEKGEPGE-----------AGNPGPP 1266
Query: 665 SPSPVGSPVG--SNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFM 722
+ VG P G + +GP A PG++ PP G + P GF
Sbjct: 1267 GEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGN------------PGPVGF- 1313
Query: 723 AGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSN--SSGTYGPQMSQYGPQG 780
P GP P P GQ G + + G GP + GP G
Sbjct: 1314 -------------PGDPGP--PGEPGPAGQDGVGGDKGEDGDPGQPGPPGPS-GEAGPPG 1357
Query: 781 NYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAV----PLGRMPSAGMQNR 836
PP G P A+ G A + +GP G V P G+ G++
Sbjct: 1358 ----PPGKRGPPGAA-GAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGI 1412
Query: 837 PFPGNMSSMTPSSPGMSQQGGP--GMGPP-MP-------TVNRKAQEAAAAVMQAAANSA 886
P P + PG + Q GP MGPP +P + K ++
Sbjct: 1413 PGPVGEQGL----PGAAGQDGPPGPMGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQG 1468
Query: 887 QSRQGSFPGMNQS-------GLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAAS 939
+ PG S G+ + P P PP P + S
Sbjct: 1469 EKGDRGLPGTQGSPGAKGDGGIPGPAGPLGPP-----------GPPGLPGPQGPKGNKGS 1517
Query: 940 VGLADMMSPGESKLPLPLKADGK--EEGTPQPESKSKKSSSST 980
G A G+S LP P + G E P P SKK+ T
Sbjct: 1518 TGPAG--QKGDSGLPGPPGSPGPPGEVIQPLPILSSKKTRRHT 1558
Score = 88.2 bits (217), Expect = 8e-17
Identities = 205/839 (24%), Positives = 260/839 (30%), Gaps = 163/839 (19%)
Query: 67 QQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGD 126
+ ++ + P S N G G A + HG A G+ G P + +PG
Sbjct: 385 EYKEYEDKPTSPPNEEFGPGVPAETDITETSINGHG------AYGEKGQKGEPAVVEPGM 438
Query: 127 EDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG--GGGGPAAVPEFNNYYGSAAPAS- 183
+ PP PA G PGL Q P PG G GP P G P
Sbjct: 439 LVEGPPGPAGPA-GIMGPPGL------QGPTGPPGDPGDRGPPGRPGLPGADGLPGPPGT 491
Query: 184 --------GGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNS 235
GG G + GP Q++ ++ A A G PG M
Sbjct: 492 MLMLPFRYGGDGSK-GPTI---SAQEAQAQAILQQARIALRGPPGPMGLT---------- 537
Query: 236 QCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
RPG GG G G G SG G G G G A GG
Sbjct: 538 --------GRPGP-VGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGR 588
Query: 296 GGGGYGGSSA--GY-GVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQ 352
G G G+ G+ G+ P +G GP G G G
Sbjct: 589 GMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGE-----IGPRG 643
Query: 353 HPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAA 412
P A P LL P P P QP A G
Sbjct: 644 LPGEAGP--RGLL------------------GPRGTPGAPGQP------GMAGVDGPPGP 677
Query: 413 AGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYG 472
G +MG Q P Q P PG GP G P + +P L G
Sbjct: 678 KG-----NMGPQ---GEPGPPGQQGNPGPQGLPGPQGPI-----GPPGEKGPQGKPGLAG 724
Query: 473 M--GSNPHSQP-QQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQ 529
+ P P ++ G+ GPPGPQ PIG G A + + G+
Sbjct: 725 LPGADGPPGHPGKEGQSGEKGALGPPGPQG-PIGYPGPRGVKGADGVRGLKGSKGEKGED 783
Query: 530 GVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPG 589
G G+ +G + + + P+ + P + R P D G PG
Sbjct: 784 GFPGF--KGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPG 841
Query: 590 KPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPA---- 645
P + P G P G+ A+G ++G P
Sbjct: 842 LPGY--------------PGRQG-----PKGSTG-FPGFPGANGEKGARGVAGKPGPRGQ 881
Query: 646 QSPFSPHASPHLSSIPGGPSP-------SPVGSPVGSNQSRSGPISPASIPGSQMPPQPP 698
+ P P S G P P P G P + GP P PG + PP PP
Sbjct: 882 RGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPP--GERGPQGPQGPVGFPGPKGPPGPP 939
Query: 699 GSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQ----QTGP-SMSPHPSPGGQM 753
G HP E GF T GPQ +TGP HP P G
Sbjct: 940 GKDG-LPGHPG-----QRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPP 993
Query: 754 -HAGI-SSFQQSNSSGTYGPQ--MSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANN 809
G+ + + + G GPQ + GP G P G+P A PG+
Sbjct: 994 GEQGLPGAAGKEGAKGDPGPQGISGKDGPAG-LRGFPGERGLPGAQ---GAPGL------ 1043
Query: 810 QMHGQGPSQPCGAV-PLGRMPSAGMQNR-PFPGNMSSMTPSSPGMSQQGGPG-MGPPMP 865
G+GP P G V G SAG PG P P ++G PG GP P
Sbjct: 1044 -KGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPA-GEKGAPGEKGPQGP 1100
Score = 78.6 bits (192), Expect = 6e-14
Identities = 152/620 (24%), Positives = 191/620 (30%), Gaps = 110/620 (17%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGR 141
L G G PGP + G A + G PGP P E AP + G P G
Sbjct: 1043 LKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKG-PQGPA 1101
Query: 142 YEHPGLGALGTQQP--PVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAG-----PCF 194
G +G P P PG G + E GP G G
Sbjct: 1102 GRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAP 1161
Query: 195 DQHGGQQSPG----MGMM-HSASAAAAGAPGSMDPL-QNSHEGYPNSQCNH-------YP 241
GG PG GM A G PG P+ G P + + P
Sbjct: 1162 GIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPP 1221
Query: 242 GYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYG 301
G P G G G G G G GG G G A A G G G
Sbjct: 1222 GPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEK 1281
Query: 302 GSSAGYGVLSSPRQQG----------GGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQN 351
G + G P +G G + PG G A GG + G++
Sbjct: 1282 GEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDK---GED 1338
Query: 352 QHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQA 411
P P P P S + PP PP + AA G++
Sbjct: 1339 GDPG-----------QPGP---------PGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKG 1378
Query: 412 AAG-------MGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMV 464
A G G +G Q A P + P G PG PM P
Sbjct: 1379 AKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGP-- 1436
Query: 465 MKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQ-----RYPIGIQGRTPGAMAGMQYPQ 519
P L G+ +P S+ ++ P G GPPG Q R G QG +PGA P
Sbjct: 1437 ---PGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQG-SPGAKGDGGIP- 1491
Query: 520 QQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLP-PQAQYLPSQSQQRYQPQQDMSQEGY 578
G G G P PP LP PQ P ++ P Q+G
Sbjct: 1492 -------GPAGPLG------------PPGPPGLPGPQG---PKGNKGSTGP---AGQKGD 1526
Query: 579 GTRSQPPLAPGKPNH--EDLNLIQQER-----PSSLPDLSGSIDDLPTGTEATLSSAVSA 631
PP +PG P + L ++ ++ D +I D G E S S
Sbjct: 1527 SGLPGPPGSPGPPGEVIQPLPILSSKKTRRHTEGMQADADDNILDYSDGMEEIFGSLNSL 1586
Query: 632 SGSTS----SQGDQSNPAQS 647
G Q+NPA++
Sbjct: 1587 KQDIEHMKFPMGTQTNPART 1606
>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
Length = 1604
Score = 100 bits (249), Expect = 2e-20
Identities = 245/999 (24%), Positives = 309/999 (30%), Gaps = 209/999 (20%)
Query: 93 GPDMEQPQHGGAKDSAAGGQADPPGPP------LLSKPGDEDDAPPKMGEPAGGRYEHPG 146
GP ++ G G+ PPG P L PGD P G+ G PG
Sbjct: 429 GPKGQKGDPGFVGPEGLAGEPGPPGLPGPPGIGLPGTPGDPGGPPGPKGDK--GSSGIPG 486
Query: 147 LGALGTQQPPVAVPGGGGGPAAV----PE-FNNYYG------------SAAPASGGPG-- 187
G + V G G P V PE F N+ G PA G PG
Sbjct: 487 KEGPGGKPGKPGVKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGDPVPARGDPGIQ 546
Query: 188 ---GRAG-PCFD-------QH--------GGQQSPGMGMM----------------HSAS 212
G G PC QH G SPG G+ +
Sbjct: 547 GIKGEKGEPCLSCSSVVGAQHLVSSTGASGDVGSPGFGLPGLPGRAGVPGLKGEKGNFGE 606
Query: 213 AAAAGAPGSMDPLQNSH-EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGA 271
A AG+PG P+ + +G C P S G G G G G G
Sbjct: 607 AGPAGSPGPPGPVGPAGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEPGPPGF 666
Query: 272 GAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAA- 330
G G A AG G G G++ G+ P QG G G G
Sbjct: 667 GLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGDGCTA 726
Query: 331 --SLSKAAAGSAAGGFQRFAGQNQHPSGA----------------TPTLNQLLTSPSPMM 372
SL A Q Q P G P L + P P
Sbjct: 727 CPSLQGTVTDMAGRPGQPGPKGEQGPEGVGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPG 786
Query: 373 RSYGGSYPEYSSPSAP-------PPPPSQPQSQAAAAGA----AAGGQQAAAGMGLGKDM 421
R G E +P P P P P + A G+ A G G +
Sbjct: 787 RGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPP 846
Query: 422 GAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQP 481
G P G PG SQG + + P L+ MGS+ P
Sbjct: 847 GRDGQQGQTGLRGTPGEKGPRGEKGEPGECSCPSQGDLIFSGMPGAPGLW-MGSSWQPGP 905
Query: 482 QQSSPYPGGSYGPPGPQRYPIGIQGRTPG-----AMAGMQYPQQQMP-PQYGQQGVSGYC 535
Q P G GPPGP P G+QG PG G+ +P Q+ + + G C
Sbjct: 906 QG----PPGIPGPPGPPGVP-GLQG-VPGNNGLPGQPGLTAELGSLPIEQHLLKSICGDC 959
Query: 536 QQGQQ--PYYSQQ---------PQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGY------ 578
QGQ+ P Y + P P L AQ S + R + + + EG
Sbjct: 960 VQGQRAHPGYLVEKGEKGDQGIPGVPGLDNCAQCFLSLERPRAEEARGDNSEGDPGCVGS 1019
Query: 579 ----------GTRSQ-----------------PPLAPGKPNHEDLNLIQQERPSSLPDLS 611
G R + PP PG L +Q ER L L+
Sbjct: 1020 PGLPGPPGLPGQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQGER--GLTGLT 1077
Query: 612 GSIDD-----LPTGTEAT----LSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPG 662
G + P AT L G T S G++ P P S L PG
Sbjct: 1078 GDKGEPGPPGQPGYPGATGPPGLPGIKGERGYTGSAGEKGEPG-----PPGSEGLPGPPG 1132
Query: 663 GPSPSPVGSPVGSNQSRS-----------GPISPASIPGSQMPPQPPGSQSESSSHPALS 711
P P G++ + GP P PG P PPG Q+E S
Sbjct: 1133 PAGPRGERGPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKVGSPGPPGPQAEKGSEGIRG 1192
Query: 712 QSPMPQERG--FMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMH-AGISSFQ-QSNSSG 767
S +P G G Q + + P + P P G G F+ ++ G
Sbjct: 1193 PSGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPG 1252
Query: 768 TYGPQ--MSQYGPQGNYSRPPAYSGVPSA--SYSGPGPGMGISANNQMHGQGPSQPCGAV 823
GP+ + GP G+ RP A G P A PGP + GP+ AV
Sbjct: 1253 LPGPKGDCGKPGPPGSTGRPGA-EGEPGAMGPQGRPGPPGHVGPPGPPGQPGPA-GISAV 1310
Query: 824 PL-------GRMPSAGMQNRPFPGNMSSMTPSSPG----MSQQGGPG----MGPPMPTVN 868
L G AG+ +P P P PG ++G PG GPP P
Sbjct: 1311 GLKGDRGATGERGLAGLPGQPGPPGHPG-PPGEPGTDGAAGKEGPPGKQGFYGPPGP--- 1366
Query: 869 RKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSP 907
K AA Q + R G G +SG M P
Sbjct: 1367 -KGDPGAAG--QKGQAGEKGRAGMPGGPGKSGSMGPVGP 1402
Score = 78.2 bits (191), Expect = 8e-14
Identities = 125/480 (26%), Positives = 144/480 (30%), Gaps = 76/480 (15%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLL-------------SKPGDEDD- 129
G G PGP E+ G S G PPGPP + KPG D
Sbjct: 1171 GKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDP 1230
Query: 130 ---APPKMGEPAG--GRYEHPGL-GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPAS 183
PP + P G G+ HPGL G G P PG G P A E P +
Sbjct: 1231 GPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKP-GPPGSTGRPGAEGE---------PGA 1280
Query: 184 GGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPL-QNSHEGYPNSQCNHYPG 242
GP GR GP H G P G A +A G G + G P PG
Sbjct: 1281 MGPQGRPGP--PGHVGPPGP-PGQPGPAGISAVGLKGDRGATGERGLAGLPGQP--GPPG 1335
Query: 243 YSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGG 302
+ P G G G G G G G G G A A AG GG G G
Sbjct: 1336 HPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSG 1395
Query: 303 SSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAG--GFQRFAGQNQHPSGATPT 360
S G ++G GP G + G +RF Q
Sbjct: 1396 SMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQEIIKMFDERM 1455
Query: 361 LNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGM----- 415
PM + P P P P S G+Q G+
Sbjct: 1456 AYYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGVRGLPG 1515
Query: 416 --GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGM 473
G D+G A + PG PGP QG P YG
Sbjct: 1516 TKGEKGDIGIGIAGENGL-------------PGPPGP-----QGPPG----------YGK 1547
Query: 474 GSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSG 533
QQ P G GPPGP P P G +QQ PP +G G
Sbjct: 1548 MGATGPMGQQGIP---GIPGPPGPMGQPGKAGHCNPSDCFGAMPMEQQYPPMKTMKGPFG 1604
Score = 76.6 bits (187), Expect = 2e-13
Identities = 207/869 (23%), Positives = 271/869 (31%), Gaps = 129/869 (14%)
Query: 87 GGAPQPGPDMEQPQHGGAKDSAAGGQADP--PGPPLLSKPGDEDDAPPKMGEPAGGRYEH 144
G QPGP EQ G + G P GPP L E P + + G
Sbjct: 739 GRPGQPGPKGEQGPEGVGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPGRGVQGPQGEPGA 798
Query: 145 PGLGALGTQQPPVAVPG-----GGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGG 199
PGL + P PG G G V G + GP GR G Q G
Sbjct: 799 PGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRDGQQ-GQTGL 857
Query: 200 QQSPGMGMMHSASAAAAGAPGSMD-PLQNS--HEGYPNSQCNHYPGYSRPGAGGGGG--G 254
+ +PG G PG P Q G P + +PG G G G
Sbjct: 858 RGTPG----EKGPRGEKGEPGECSCPSQGDLIFSGMPGAPGLWMGSSWQPGPQGPPGIPG 913
Query: 255 GGGGGGGSGGGGGGGGAGAGGA-GAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSP 313
G G G G G G G G A + G G A G L
Sbjct: 914 PPGPPGVPGLQGVPGNNGLPGQPGLTAELGSLPIEQHLLKSICGDCVQGQRAHPGYLVEK 973
Query: 314 RQQGGGMMMG-PGGGGAA----SLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSP 368
++G + G PG A SL + A A G ++ G + L P
Sbjct: 974 GEKGDQGIPGVPGLDNCAQCFLSLERPRAEEARGD------NSEGDPGCVGSPG--LPGP 1025
Query: 369 SPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAA-GGQQAAAGM-GLGKDMGAQYA 426
+ G P S PP P P A G+ G Q G+ GL D G
Sbjct: 1026 PGLPGQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQGERGLTGLTGDKGEPGP 1085
Query: 427 AASPAW-------------------AAAQQRSHPAMS-----PGTPGPTMGRSQGSPMDP 462
P + +A ++ P PG PGP R + P
Sbjct: 1086 PGQPGYPGATGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGN 1145
Query: 463 MVMKRPQLYGMGSNPHSQPQQSSPYPG--GSYGPPGPQRYPIGIQG-RTPGAMAGMQYPQ 519
K Q + G P +PG GS GPPGPQ G +G R P + G P
Sbjct: 1146 SGEKGDQGF-QGQPGFPGPPGPPGFPGKVGSPGPPGPQAEK-GSEGIRGPSGLPGSPGPP 1203
Query: 520 QQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYG 579
P G G+ G + +P P P PP P + P + G
Sbjct: 1204 GP-PGIQGPAGLDGLDGKDGKPGLRGDPGPAG-PPGLMGPPGFKGKTGHPGLPGPKGDCG 1261
Query: 580 TRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDL-PTGTEATLS-SAVSASGSTSS 637
+ PP + G+P E P P G + P G SAV G +
Sbjct: 1262 -KPGPPGSTGRPGAEGEPGAMG--PQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGA 1318
Query: 638 QGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQP 697
G++ L+ +PG P P P G G PG Q P
Sbjct: 1319 TGERG--------------LAGLPGQPGPPGHPGPPGE-PGTDGAAGKEGPPGKQGFYGP 1363
Query: 698 PGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQ----------QTGPSMSPH- 746
PG + + + Q+ G G ++ M GP GPS SP
Sbjct: 1364 PGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGL 1423
Query: 747 PSPGGQM-----HAGISSFQQSNSSGTYGPQMSQYGPQGNYSR----------PPAYSGV 791
P G M + I F + + +M+ Y + + PP G
Sbjct: 1424 PGVPGSMGDMVNYDEIKRFIRQEIIKMFDERMAYYTSRMQFPMEMAAAPGRPGPPGKDGA 1483
Query: 792 PSASYSGPGPGM----GISANNQMHG----QGPSQPCGAVPLGRMPSAGMQNRPFP---- 839
P + PG+ G + G G G + +G G+ P P
Sbjct: 1484 PGRPGAPGSPGLPGQIGREGRQGLPGVRGLPGTKGEKGDIGIGIAGENGLPGPPGPQGPP 1543
Query: 840 --GNMSSMTPSSPGMSQQGGPGM-GPPMP 865
G M + P M QQG PG+ GPP P
Sbjct: 1544 GYGKMGATGP----MGQQGIPGIPGPPGP 1568
Score = 75.5 bits (184), Expect = 5e-13
Identities = 166/677 (24%), Positives = 211/677 (31%), Gaps = 129/677 (19%)
Query: 79 NNSLGGAG--GGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGE 136
+NS G G G PGP Q G G PPGP + PG P +G
Sbjct: 1008 DNSEGDPGCVGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPGP--IGPPG----FPGAVGS 1061
Query: 137 PA-GGRYEHPGLGALGTQQPPVAVPG-----GGGGPAAVPEFNNYYGSAAPASGGPGGRA 190
P G GL L + PG G GP +P G S G G
Sbjct: 1062 PGLPGLQGERGLTGLTGDKGEPGPPGQPGYPGATGPPGLPGIKGERGYTG--SAGEKGEP 1119
Query: 191 GPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGG 250
GP G + PG AG G P NS E + PG+ P
Sbjct: 1120 GP----PGSEGLPG-------PPGPAGPRGERGPQGNSGEK-GDQGFQGQPGFPGPPGPP 1167
Query: 251 GGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVL 310
G G G G G G G G + G G G G G+
Sbjct: 1168 GFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLR 1227
Query: 311 SSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSP 370
P G +MGP G F G+ HP P + P
Sbjct: 1228 GDPGPAGPPGLMGPPG--------------------FKGKTGHPGLPGPKGDCGKPGPPG 1267
Query: 371 MMRSYGGS-YPEYSSPSAPPPPPSQ-----PQSQAAAAGAAAGGQQAAAGMGLGKDMGAQ 424
G P P P PP P Q AG +A +GL D GA
Sbjct: 1268 STGRPGAEGEPGAMGPQGRPGPPGHVGPPGPPGQPGPAGISA--------VGLKGDRGA- 1318
Query: 425 YAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQS 484
+R + PG PGP G P P G + ++
Sbjct: 1319 ----------TGERGLAGL-PGQPGPP-----GHPGPP---------GEPGTDGAAGKEG 1353
Query: 485 SPYPGGSYGPPGPQRYP--------IGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQ 536
P G YGPPGP+ P G +GR M G M P G G +G
Sbjct: 1354 PPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRA--GMPGGPGKSGSMGP-VGPPGPAGERG 1410
Query: 537 QGQQPYYSQQPQPPHLPPQAQYLPSQSQ-QRYQPQQ-----DMSQEGYGTRSQPPL---- 586
P S P P +P + + + +R+ Q+ D Y +R Q P+
Sbjct: 1411 HPGAPGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQEIIKMFDERMAYYTSRMQFPMEMAA 1470
Query: 587 APGKPNH--EDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNP 644
APG+P +D + P S P L G I G E G ++G++ +
Sbjct: 1471 APGRPGPPGKDGAPGRPGAPGS-PGLPGQI-----GREGR-QGLPGVRGLPGTKGEKGDI 1523
Query: 645 AQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQP---PGSQ 701
+ P GP P P G P +GP+ IPG PP P PG
Sbjct: 1524 GIGIAGENGLP-------GP-PGPQGPPGYGKMGATGPMGQQGIPGIPGPPGPMGQPGKA 1575
Query: 702 SESSSHPALSQSPMPQE 718
+ PM Q+
Sbjct: 1576 GHCNPSDCFGAMPMEQQ 1592
Score = 65.9 bits (159), Expect = 4e-10
Identities = 174/780 (22%), Positives = 238/780 (30%), Gaps = 139/780 (17%)
Query: 246 PGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSA 305
P G G G G G GG G G G G G G G +
Sbjct: 388 PSGLPGSTGEKGQKGEKGDGGIKGVPGKPGRDGRPGEICVIGPKGQKGDPGFVGPEGLAG 447
Query: 306 GYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAA----------GGFQRFAGQNQHPS 355
G P G G+ PG G K GS+ G G+ P
Sbjct: 448 EPGPPGLPGPPGIGLPGTPGDPGGPPGPKGDKGSSGIPGKEGPGGKPGKPGVKGEKGDPC 507
Query: 356 GATPTLNQLLTSPSPMMRSYG--GSYPEYSSPSAPPPPPSQPQSQ---------AAAAGA 404
PTL P G G P P P P Q + +
Sbjct: 508 EVCPTL------PEGFQNFVGLPGKPGPKGEPGDPVPARGDPGIQGIKGEKGEPCLSCSS 561
Query: 405 AAGGQQAAAGMGLGKDMGA--------QYAAASPAWAAAQ---QRSHPAMSPGTPGPT-- 451
G Q + G D+G+ A P + + PA SPG PGP
Sbjct: 562 VVGAQHLVSSTGASGDVGSPGFGLPGLPGRAGVPGLKGEKGNFGEAGPAGSPGPPGPVGP 621
Query: 452 --MGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPI-GIQGRT 508
+ ++G P +P P L + + P P G G PGP + + G QG+
Sbjct: 622 AGIKGAKGEPCEPC----PALSNLQDG--DVRVVALPGPSGEKGEPGPPGFGLPGKQGKA 675
Query: 509 PGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQP-----------PHLPPQAQ 557
Q P G G +G +P P P L
Sbjct: 676 GERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGDGCTACPSLQGTVT 735
Query: 558 YLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDL 617
+ + Q P+ + EG G PGKP LP + G
Sbjct: 736 DMAGRPGQP-GPKGEQGPEGVG-------RPGKPGQ-----------PGLPGVQG----- 771
Query: 618 PTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQ 677
P G + G G Q P +P L I G P P P G
Sbjct: 772 PPGLK----------GVQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKG 821
Query: 678 SRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGP- 736
++ P + G+ P PPG+ S S P G T + GP
Sbjct: 822 AQGSP----GVKGATGPVGPPGA----------SVSGPPGRDGQQGQTGLRGTPGEKGPR 867
Query: 737 -QQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSAS 795
++ P PS G + +G+ + G + Q GPQG PP G P
Sbjct: 868 GEKGEPGECSCPSQGDLIFSGM-----PGAPGLWMGSSWQPGPQG----PPGIPGPPGP- 917
Query: 796 YSGPG-PGM-GISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPG-- 851
PG PG+ G+ NN + P QP LG +P + G+ + PG
Sbjct: 918 ---PGVPGLQGVPGNNGL----PGQPGLTAELGSLPIEQHLLKSICGDCVQGQRAHPGYL 970
Query: 852 --MSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPG-MNQSGLMASSS-P 907
++G G+ P +P ++ AQ + A + PG + GL P
Sbjct: 971 VEKGEKGDQGI-PGVPGLDNCAQCFLSLERPRAEEARGDNSEGDPGCVGSPGLPGPPGLP 1029
Query: 908 YSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTP 967
+ + + PP + P + S GL + GE L L D E G P
Sbjct: 1030 GQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQ--GERGL-TGLTGDKGEPGPP 1086
Score = 33.9 bits (76), Expect = 1.8
Identities = 77/327 (23%), Positives = 109/327 (33%), Gaps = 66/327 (20%)
Query: 1110 PSPANSGSLQGPQ-TPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDP 1168
P P G +QGPQ P + G + +PG PP P Q +P G + +T V P
Sbjct: 782 PGPPGRG-VQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSP--GVKGATGPVGPP 838
Query: 1169 FSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQG 1228
+ VS P QQG + G+R PG P +G
Sbjct: 839 GASVSG---------PPGRDGQQGQT------------------GLRGTPGEKGPRGEKG 871
Query: 1229 QMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYG 1288
+ S + SG G+ G+S+ +P Q PG P G P
Sbjct: 872 EPGECSCPSQGDLIFSGMPGAPGLWM------GSSW----QPGPQGPPGIPGPPGPPGVP 921
Query: 1289 GHQ--PGL--YPQQPNYKRHMDGMYGPPAKRH----------EGDMYNMQYSSQQQEMYN 1334
G Q PG P QP + + P ++H +G + Y ++ E +
Sbjct: 922 GLQGVPGNNGLPGQPGLTAELGSL---PIEQHLLKSICGDCVQGQRAHPGYLVEKGEKGD 978
Query: 1335 QYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMW 1394
Q G D Q R R + + G P G + S GP
Sbjct: 979 QGIPGVPGLDN---CAQCFLSLERPRAEEARGDNSEGDP-----GCVGSPGLPGPPGLPG 1030
Query: 1395 AARNDMPYPYQNRQGPGGPTQAPPYPG 1421
+ P + GP GP P +PG
Sbjct: 1031 QRGEEGPPGMRGSPGPPGPIGPPGFPG 1057
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 99.4 bits (246), Expect = 3e-20
Identities = 95/296 (32%), Positives = 117/296 (39%), Gaps = 43/296 (14%)
Query: 66 QQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPG 125
Q++Q Q P+ + GG GGG G GG GG G S G
Sbjct: 4 QKKQPTPQPPVDCVKTSGGGGGGGGSGG--------GGCGFFGGGGSG---GGSSGSGCG 52
Query: 126 DEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG- 184
G GG G G +G G GGG +++ GS+ SG
Sbjct: 53 YSGGGGYSGGGCGGGSSGGGGGGGIG---------GCGGGSGGSVKYSGGGGSSGGGSGC 103
Query: 185 -GPGGRAGPCFDQHGGQQSPG-MGMMHSASAAAAGAPGSMDPLQNSHEGYPNS--QCNHY 240
GG CF GG S G G S ++G G + G+ QC Y
Sbjct: 104 FSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSG--GGSGCFSSGGGGFSGQAVQCQSY 161
Query: 241 PGYSRPGAGGGGGG----GGGGG---GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAA- 292
G S G+ GGG G GGGGG G SGGG G GG +GG+G+G V++ + A
Sbjct: 162 GGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAP 221
Query: 293 --GGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSK---AAAGSAAGG 343
GGG GG S G G SS GGG G GGG + S + GS GG
Sbjct: 222 QPSYGGGSSGGGGSGGSGCFSS---GGGGGSSGCGGGSSGIGSGCIISGGGSVCGG 274
Score = 89.7 bits (221), Expect = 3e-17
Identities = 67/212 (31%), Positives = 89/212 (41%), Gaps = 25/212 (11%)
Query: 247 GAGGGGGGGGGGGGGSGGGGGGGGAGAGGAG--AGAVAAAAAAAAAAAGGGGGGGYGGSS 304
G GGGGG GGGG G GGGG GGG+ G G G + ++GGGGGGG GG
Sbjct: 22 GGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGCG 81
Query: 305 AGYGVLSSPRQQGGGMMMG-------PGGGGAASLSKAAAGSAAGGFQRFA----GQNQH 353
G G S + GGG G GGGG+ S GS+ GG F+ G +
Sbjct: 82 GGSG--GSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGG 139
Query: 354 PSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAA 413
SG + + + +SYGG SS S S G+ G +
Sbjct: 140 GSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGG-----SGCFSSGGGGGSVCGYSGGGS 194
Query: 414 GMGLGKDMGAQYAAASPAWAAAQQRSHPAMSP 445
G G G G + + ++QQ + + +P
Sbjct: 195 GCGGGSSGG-----SGSGYVSSQQVTQTSCAP 221
Score = 89.0 bits (219), Expect = 5e-17
Identities = 68/227 (29%), Positives = 88/227 (38%), Gaps = 18/227 (7%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMG--EPAG 139
+GG GGG+ G ++ GG+ +G + G G + G G
Sbjct: 77 IGGCGGGS---GGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGG 133
Query: 140 GRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGG 199
G G G + GGGG + +Y G + SGG G CF GG
Sbjct: 134 GGSSGGGSGCFSS--------GGGGFSGQAVQCQSYGGVS---SGGSSGGGSGCFSSGGG 182
Query: 200 QQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG 259
S G S G+ G S + + C P Y G+ GGGG GG G
Sbjct: 183 GGSV-CGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGG-GSSGGGGSGGSGC 240
Query: 260 GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAG 306
SGGGGG G G G +G G+ + + GG GGG GGSS G
Sbjct: 241 FSSGGGGGSSGCGGGSSGIGSGCIISGGGSVCGGGSSGGGGGGSSVG 287
Score = 85.1 bits (209), Expect = 7e-16
Identities = 76/243 (31%), Positives = 94/243 (38%), Gaps = 41/243 (16%)
Query: 152 TQQPPV----AVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM 207
T QPPV GGGGG + ++G G G G + GG G G
Sbjct: 9 TPQPPVDCVKTSGGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCG--YSGGGGYSGGGCGG 66
Query: 208 MHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGG------GGGG 261
S G G C G S +GGGG GGG GGGG
Sbjct: 67 GSSGGGGGGGIGG----------------CGGGSGGSVKYSGGGGSSGGGSGCFSSGGGG 110
Query: 262 SG----GGGG--GGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQ 315
SG GGGG GGG+G +G G ++ + ++GGGG G YG +SS
Sbjct: 111 SGCFSSGGGGSSGGGSGCFSSGGGG-SSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGS 169
Query: 316 QGGGM-MMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRS 374
GGG GGGG + + GS GG + + S T Q +P P S
Sbjct: 170 SGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVT--QTSCAPQP---S 224
Query: 375 YGG 377
YGG
Sbjct: 225 YGG 227
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 97.4 bits (241), Expect = 1e-19
Identities = 130/490 (26%), Positives = 157/490 (32%), Gaps = 129/490 (26%)
Query: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
P +P G GGGGGG GGG G GGGGGG G G + GGGG G
Sbjct: 57 PILDKPKGAGAGGGGGGFGGGGGFGGGGGGGGGG----------------SFGGGGPPGL 100
Query: 301 GG-SSAGYGVLSSPRQQ-----GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHP 354
GG AG L S + G + P GG + S + S G F H
Sbjct: 101 GGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFP--VPSPGHR 158
Query: 355 SGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAG 414
SG + P P + GS P+ S PPP PS P+
Sbjct: 159 SGPPEPQRNRMPPPRPDV----GSKPD----SIPPPVPSTPR------------------ 192
Query: 415 MGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMG 474
Q H SP PG S G P R G G
Sbjct: 193 -------------------PIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGG 233
Query: 475 SNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGY 534
S S SSP+ PP P R A P PP
Sbjct: 234 SIRQSPLSSSSPFSNRPPLPPTPSR-------------ALDDKPPPPPPP---------- 270
Query: 535 CQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHE 594
G +P ++ PP PPQ P S P+ S + PP P +P
Sbjct: 271 --VGNRPSIHREAVPPP-PPQNNKPPVPS----TPRPSASSQA----PPPPPPPSRPG-- 317
Query: 595 DLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHAS 654
P LP S D+ P + LS +S+S +S P P S
Sbjct: 318 ---------PPPLPPSSSGNDETPRLPQRNLS--LSSSTPPLPSPGRSGPLPPPPSERPP 366
Query: 655 PHLSSIPGGPSPSPVGSPVGSN-------------QSRSGPISPASIPGSQMPPQPPGSQ 701
P + PG P P PV N SRSG SP S P +PP P +
Sbjct: 367 PPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAG 426
Query: 702 SESSSHPALS 711
+ P+ S
Sbjct: 427 APPPPPPSTS 436
Score = 57.8 bits (138), Expect = 1e-07
Identities = 100/451 (22%), Positives = 152/451 (33%), Gaps = 49/451 (10%)
Query: 447 TPGPTMGRSQGSPMDPM---VMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIG 503
T PT+ +++ + + + + K +L +N S P P G+ G G G
Sbjct: 20 TEKPTLNKTEQAGRNALLSDISKGKKLKKTVTNDRSAPILDKPKGAGAGGGGGGFGGGGG 79
Query: 504 IQGRTPGAMAGMQYPQQQMPPQYG---QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLP 560
G G G PP G Q G+ + S +PP LPP +
Sbjct: 80 FGGGGGGGGGGSFGGGG--PPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGR--- 134
Query: 561 SQSQQRYQPQQDMSQ---EGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDL 617
S S + + P + G RS PP +P + P PD+ D +
Sbjct: 135 STSAKPFSPPSGPGRFPVPSPGHRSGPP----EPQRNRM-------PPPRPDVGSKPDSI 183
Query: 618 PTGTEAT---LSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPS--PSPVGSP 672
P +T + S+ GS G P+ P P + + GG S SP+ S
Sbjct: 184 PPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSS 243
Query: 673 VGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMA 732
+ P +P+ + PP PP + S H P PQ + P +
Sbjct: 244 SPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSAS 303
Query: 733 QYGPQQTGPSMSPHPSPGGQMHAGISSF----QQSNSSGTYGPQMSQYGPQGNYSRPPAY 788
P P P P P +G Q++ S + P + G G PP+
Sbjct: 304 SQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSE 363
Query: 789 SGVPSA----SYSGP-GPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMS 843
P SGP P +S N P+ P ++PS + P G
Sbjct: 364 RPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATP-------QLPSRSGVDSPRSGPRP 416
Query: 844 SMTPSSPGMSQQGGPGMGPPMPTVNRKAQEA 874
+ P P G P PP ++ Q++
Sbjct: 417 PLPPDRP---SAGAPPPPPPSTSIRNGFQDS 444
Score = 47.8 bits (112), Expect = 1e-04
Identities = 82/300 (27%), Positives = 106/300 (35%), Gaps = 66/300 (22%)
Query: 1276 PGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEG---DMYNMQYSSQ---- 1328
P GP P GH+ G P +P R PP + G D S
Sbjct: 143 PPSGPGRFPVPSPGHRSG--PPEPQRNRM------PPPRPDVGSKPDSIPPPVPSTPRPI 194
Query: 1329 QQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSS--SS 1386
Q +N+ G R+P G P P+ R G GG ++ S SS
Sbjct: 195 QSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALG------------GGSIRQSPLSS 242
Query: 1387 EGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVS 1446
P N R +P P +R P PP G NR I+ E+ P
Sbjct: 243 SSPFSN----RPPLP-PTPSRALDDKPPPPPPPVG-NRPS--------IHREAVPPPPPQ 288
Query: 1447 QRQPYMSS----SASMQPITRPPQPSYQTPPSLPNHIS-RAPSPASFQRSLENRMSPSKS 1501
+P + S SAS Q PP PS PP LP S +P QR+L S +
Sbjct: 289 NNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLS---LSSST 345
Query: 1502 PFLPSMKMQKVMPTVPTSQV----------TGPPPQPPPIRREITFPPGSVEASQPVLKQ 1551
P LPS +P P+ + +GP P PPP+ R GS + P Q
Sbjct: 346 PPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRN-----GSTSRALPATPQ 400
Score = 46.6 bits (109), Expect = 3e-04
Identities = 65/261 (24%), Positives = 92/261 (35%), Gaps = 40/261 (15%)
Query: 747 PSPGGQMHAGI----SSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPG 802
P GG AG+ S+ + N SG P + G + ++P + P + P PG
Sbjct: 98 PGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGR-FPVPSPG 156
Query: 803 MGISANNQMHGQGPSQP-----------CGAVPLGRMPSAGMQNRPF---PGNMSSMTPS 848
H GP +P G+ P P RP P N S P
Sbjct: 157 ---------HRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGS--PP 205
Query: 849 SPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ--SRQGSFPGMNQSGLMASSS 906
PG +Q PG PP NR ++ Q+ +S+ S + P L
Sbjct: 206 VPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPP 265
Query: 907 PYSQPMNNSSSLMNTQAPP------YSMAPAMVNSSAASVGLADMMSPGE-SKLPLPLKA 959
P P+ N S+ PP P+ SA+S P PLP +
Sbjct: 266 PPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSS 325
Query: 960 DGKEEGTPQPESKSKKSSSST 980
G +E TP+ ++ SSST
Sbjct: 326 SGNDE-TPRLPQRNLSLSSST 345
Score = 42.7 bits (99), Expect = 0.004
Identities = 49/185 (26%), Positives = 66/185 (35%), Gaps = 30/185 (16%)
Query: 75 PISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKM 134
P+ N S+ P P P +P +A QA PP PP S+PG PP +
Sbjct: 270 PVGNRPSIHREA--VPPPPPQNNKPPVPSTPRPSASSQAPPPPPP-PSRPG-----PPPL 321
Query: 135 GEPAGGRYEHPGLG----ALGTQQPPVAVPGGGG------GPAAVPEFNNYYGSAAP--- 181
+ G E P L +L + PP+ PG G P + G + P
Sbjct: 322 PPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP 381
Query: 182 ----ASGGPGGRAGPCFDQ---HGGQQSPGMGMMH--SASAAAAGAPGSMDPLQNSHEGY 232
+ G RA P Q G SP G +AGAP P + G+
Sbjct: 382 PPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGF 441
Query: 233 PNSQC 237
+S C
Sbjct: 442 QDSPC 446
Score = 40.0 bits (92), Expect = 0.025
Identities = 42/173 (24%), Positives = 61/173 (35%), Gaps = 25/173 (14%)
Query: 1367 IQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTD 1426
I +PP P Q++ P +A + P P PG P P G + T
Sbjct: 277 IHREAVPPP----PPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETP 332
Query: 1427 DMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSL---PNHISRAP 1483
+ P + ++ +S P + S P+ PP PS + PP + P P
Sbjct: 333 RL--PQRNLS--------LSSSTPPLPSPGRSGPL--PPPPSERPPPPVRDPPGRSGPLP 380
Query: 1484 SPASFQRSLENRMSPSKSPFLPSM------KMQKVMPTVPTSQVTGPPPQPPP 1530
P R+ + +P LPS + P P G PP PPP
Sbjct: 381 PPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPP 433
Score = 37.7 bits (86), Expect = 0.12
Identities = 48/182 (26%), Positives = 62/182 (34%), Gaps = 21/182 (11%)
Query: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRY 142
GG GGG G GG GG GPP L G PK+ A
Sbjct: 68 GGGGGGFGGGGG------FGGGGGGGGGGSFGGGGPPGLG--GLFQAGMPKLRSTANRDN 119
Query: 143 EHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQS 202
+ G +PP+ +P GG +A P F+ G PG R+GP Q
Sbjct: 120 DSGG------SRPPL-LPPGGRSTSAKP-FSPPSGPGRFPVPSPGHRSGPPEPQRNRMPP 171
Query: 203 PGMGMMHSASAAAAGAPGSMDPLQNSHEG-----YPNSQCNHYPGYSRPGAGGGGGGGGG 257
P + + P + P+Q+S P PG + P G G G
Sbjct: 172 PRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALG 231
Query: 258 GG 259
GG
Sbjct: 232 GG 233
Score = 35.8 bits (81), Expect = 0.47
Identities = 49/181 (27%), Positives = 61/181 (33%), Gaps = 31/181 (17%)
Query: 87 GGAPQPGPDMEQPQHGGAKDSAAGGQA--------------DPPGPPLLSKPGDEDDAPP 132
GG QP P P G + +A GG + PP PP S+ DD PP
Sbjct: 208 GGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRA--LDDKPP 265
Query: 133 KMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSA-APASGGPGGRAG 191
P G R P + PP P P VP S+ AP P R G
Sbjct: 266 PPPPPVGNR---PSIHREAVPPPP---PQNNKPP--VPSTPRPSASSQAPPPPPPPSRPG 317
Query: 192 P---CFDQHGGQQSPGM---GMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSR 245
P G ++P + + S+S +PG PL P PG S
Sbjct: 318 PPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSG 377
Query: 246 P 246
P
Sbjct: 378 P 378
Score = 34.7 bits (78), Expect = 1.1
Identities = 35/135 (25%), Positives = 51/135 (37%), Gaps = 12/135 (8%)
Query: 1092 PPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQ 1151
PP D K P PP N S+ P N+ VP +P + P
Sbjct: 253 PPTPSRALDDKPPPP--PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP 310
Query: 1152 MTPMQGGRSSTISVHDPFSDVSDSS--FPKRN-SMTPNAPYQQGMSMPDVMGRMPYEPNK 1208
P + G P S +D + P+RN S++ + P + P G +P P++
Sbjct: 311 PPPSRPGPPPL----PPSSSGNDETPRLPQRNLSLSSSTP---PLPSPGRSGPLPPPPSE 363
Query: 1209 DPFGGMRKVPGSSEP 1223
P +R PG S P
Sbjct: 364 RPPPPVRDPPGRSGP 378
Score = 34.7 bits (78), Expect = 1.1
Identities = 38/168 (22%), Positives = 60/168 (35%), Gaps = 40/168 (23%)
Query: 1089 EEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQ-------------STGSNSMAEV 1135
+ PPP +P P P++SG+ + P+ PQ S G +
Sbjct: 305 QAPPPP-----PPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPP 359
Query: 1136 PGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSM 1195
P +PP P P GRS + P S + S + TP P + G+
Sbjct: 360 PPSERPPPPVRDP--------PGRSGPLPPPPPVS--RNGSTSRALPATPQLPSRSGVDS 409
Query: 1196 PDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSP 1243
P R P P++ G P P++S+++ + SP
Sbjct: 410 PRSGPRPPLPPDRPSAGAPPPPP------------PSTSIRNGFQDSP 445
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 97.4 bits (241), Expect = 1e-19
Identities = 130/490 (26%), Positives = 157/490 (32%), Gaps = 129/490 (26%)
Query: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGY 300
P +P G GGGGGG GGG G GGGGGG G G + GGGG G
Sbjct: 57 PILDKPKGAGAGGGGGGFGGGGGFGGGGGGGGGG----------------SFGGGGPPGL 100
Query: 301 GG-SSAGYGVLSSPRQQ-----GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHP 354
GG AG L S + G + P GG + S + S G F H
Sbjct: 101 GGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFP--VPSPGHR 158
Query: 355 SGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAG 414
SG + P P + GS P+ S PPP PS P+
Sbjct: 159 SGPPEPQRNRMPPPRPDV----GSKPD----SIPPPVPSTPR------------------ 192
Query: 415 MGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMG 474
Q H SP PG S G P R G G
Sbjct: 193 -------------------PIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGG 233
Query: 475 SNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGY 534
S S SSP+ PP P R A P PP
Sbjct: 234 SIRQSPLSSSSPFSNRPPLPPTPSR-------------ALDDKPPPPPPP---------- 270
Query: 535 CQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHE 594
G +P ++ PP PPQ P S P+ S + PP P +P
Sbjct: 271 --VGNRPSIHREAVPPP-PPQNNKPPVPS----TPRPSASSQA----PPPPPPPSRPG-- 317
Query: 595 DLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHAS 654
P LP S D+ P + LS +S+S +S P P S
Sbjct: 318 ---------PPPLPPSSSGNDETPRLPQRNLS--LSSSTPPLPSPGRSGPLPPPPSERPP 366
Query: 655 PHLSSIPGGPSPSPVGSPVGSN-------------QSRSGPISPASIPGSQMPPQPPGSQ 701
P + PG P P PV N SRSG SP S P +PP P +
Sbjct: 367 PPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAG 426
Query: 702 SESSSHPALS 711
+ P+ S
Sbjct: 427 APPPPPPSTS 436
Score = 57.8 bits (138), Expect = 1e-07
Identities = 100/451 (22%), Positives = 152/451 (33%), Gaps = 49/451 (10%)
Query: 447 TPGPTMGRSQGSPMDPM---VMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIG 503
T PT+ +++ + + + + K +L +N S P P G+ G G G
Sbjct: 20 TEKPTLNKTEQAGRNALLSDISKGKKLKKTVTNDRSAPILDKPKGAGAGGGGGGFGGGGG 79
Query: 504 IQGRTPGAMAGMQYPQQQMPPQYG---QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLP 560
G G G PP G Q G+ + S +PP LPP +
Sbjct: 80 FGGGGGGGGGGSFGGGG--PPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGR--- 134
Query: 561 SQSQQRYQPQQDMSQ---EGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDL 617
S S + + P + G RS PP +P + P PD+ D +
Sbjct: 135 STSAKPFSPPSGPGRFPVPSPGHRSGPP----EPQRNRM-------PPPRPDVGSKPDSI 183
Query: 618 PTGTEAT---LSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPS--PSPVGSP 672
P +T + S+ GS G P+ P P + + GG S SP+ S
Sbjct: 184 PPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSS 243
Query: 673 VGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMA 732
+ P +P+ + PP PP + S H P PQ + P +
Sbjct: 244 SPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSAS 303
Query: 733 QYGPQQTGPSMSPHPSPGGQMHAGISSF----QQSNSSGTYGPQMSQYGPQGNYSRPPAY 788
P P P P P +G Q++ S + P + G G PP+
Sbjct: 304 SQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSE 363
Query: 789 SGVPSA----SYSGP-GPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMS 843
P SGP P +S N P+ P ++PS + P G
Sbjct: 364 RPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATP-------QLPSRSGVDSPRSGPRP 416
Query: 844 SMTPSSPGMSQQGGPGMGPPMPTVNRKAQEA 874
+ P P G P PP ++ Q++
Sbjct: 417 PLPPDRP---SAGAPPPPPPSTSIRNGFQDS 444
Score = 47.8 bits (112), Expect = 1e-04
Identities = 82/300 (27%), Positives = 106/300 (35%), Gaps = 66/300 (22%)
Query: 1276 PGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEG---DMYNMQYSSQ---- 1328
P GP P GH+ G P +P R PP + G D S
Sbjct: 143 PPSGPGRFPVPSPGHRSG--PPEPQRNRM------PPPRPDVGSKPDSIPPPVPSTPRPI 194
Query: 1329 QQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSS--SS 1386
Q +N+ G R+P G P P+ R G GG ++ S SS
Sbjct: 195 QSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALG------------GGSIRQSPLSS 242
Query: 1387 EGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVS 1446
P N R +P P +R P PP G NR I+ E+ P
Sbjct: 243 SSPFSN----RPPLP-PTPSRALDDKPPPPPPPVG-NRPS--------IHREAVPPPPPQ 288
Query: 1447 QRQPYMSS----SASMQPITRPPQPSYQTPPSLPNHIS-RAPSPASFQRSLENRMSPSKS 1501
+P + S SAS Q PP PS PP LP S +P QR+L S +
Sbjct: 289 NNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLS---LSSST 345
Query: 1502 PFLPSMKMQKVMPTVPTSQV----------TGPPPQPPPIRREITFPPGSVEASQPVLKQ 1551
P LPS +P P+ + +GP P PPP+ R GS + P Q
Sbjct: 346 PPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRN-----GSTSRALPATPQ 400
Score = 46.6 bits (109), Expect = 3e-04
Identities = 65/261 (24%), Positives = 92/261 (35%), Gaps = 40/261 (15%)
Query: 747 PSPGGQMHAGI----SSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPG 802
P GG AG+ S+ + N SG P + G + ++P + P + P PG
Sbjct: 98 PGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGR-FPVPSPG 156
Query: 803 MGISANNQMHGQGPSQP-----------CGAVPLGRMPSAGMQNRPF---PGNMSSMTPS 848
H GP +P G+ P P RP P N S P
Sbjct: 157 ---------HRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGS--PP 205
Query: 849 SPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQ--SRQGSFPGMNQSGLMASSS 906
PG +Q PG PP NR ++ Q+ +S+ S + P L
Sbjct: 206 VPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPP 265
Query: 907 PYSQPMNNSSSLMNTQAPP------YSMAPAMVNSSAASVGLADMMSPGE-SKLPLPLKA 959
P P+ N S+ PP P+ SA+S P PLP +
Sbjct: 266 PPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSS 325
Query: 960 DGKEEGTPQPESKSKKSSSST 980
G +E TP+ ++ SSST
Sbjct: 326 SGNDE-TPRLPQRNLSLSSST 345
Score = 42.7 bits (99), Expect = 0.004
Identities = 49/185 (26%), Positives = 66/185 (35%), Gaps = 30/185 (16%)
Query: 75 PISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKM 134
P+ N S+ P P P +P +A QA PP PP S+PG PP +
Sbjct: 270 PVGNRPSIHREA--VPPPPPQNNKPPVPSTPRPSASSQAPPPPPP-PSRPG-----PPPL 321
Query: 135 GEPAGGRYEHPGLG----ALGTQQPPVAVPGGGG------GPAAVPEFNNYYGSAAP--- 181
+ G E P L +L + PP+ PG G P + G + P
Sbjct: 322 PPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP 381
Query: 182 ----ASGGPGGRAGPCFDQ---HGGQQSPGMGMMH--SASAAAAGAPGSMDPLQNSHEGY 232
+ G RA P Q G SP G +AGAP P + G+
Sbjct: 382 PPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGF 441
Query: 233 PNSQC 237
+S C
Sbjct: 442 QDSPC 446
Score = 40.0 bits (92), Expect = 0.025
Identities = 42/173 (24%), Positives = 61/173 (35%), Gaps = 25/173 (14%)
Query: 1367 IQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMNRTD 1426
I +PP P Q++ P +A + P P PG P P G + T
Sbjct: 277 IHREAVPPP----PPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETP 332
Query: 1427 DMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQPSYQTPPSL---PNHISRAP 1483
+ P + ++ +S P + S P+ PP PS + PP + P P
Sbjct: 333 RL--PQRNLS--------LSSSTPPLPSPGRSGPL--PPPPSERPPPPVRDPPGRSGPLP 380
Query: 1484 SPASFQRSLENRMSPSKSPFLPSM------KMQKVMPTVPTSQVTGPPPQPPP 1530
P R+ + +P LPS + P P G PP PPP
Sbjct: 381 PPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPP 433
Score = 37.7 bits (86), Expect = 0.12
Identities = 48/182 (26%), Positives = 62/182 (34%), Gaps = 21/182 (11%)
Query: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRY 142
GG GGG G GG GG GPP L G PK+ A
Sbjct: 68 GGGGGGFGGGGG------FGGGGGGGGGGSFGGGGPPGLG--GLFQAGMPKLRSTANRDN 119
Query: 143 EHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQS 202
+ G +PP+ +P GG +A P F+ G PG R+GP Q
Sbjct: 120 DSGG------SRPPL-LPPGGRSTSAKP-FSPPSGPGRFPVPSPGHRSGPPEPQRNRMPP 171
Query: 203 PGMGMMHSASAAAAGAPGSMDPLQNSHEG-----YPNSQCNHYPGYSRPGAGGGGGGGGG 257
P + + P + P+Q+S P PG + P G G G
Sbjct: 172 PRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALG 231
Query: 258 GG 259
GG
Sbjct: 232 GG 233
Score = 35.8 bits (81), Expect = 0.47
Identities = 49/181 (27%), Positives = 61/181 (33%), Gaps = 31/181 (17%)
Query: 87 GGAPQPGPDMEQPQHGGAKDSAAGGQA--------------DPPGPPLLSKPGDEDDAPP 132
GG QP P P G + +A GG + PP PP S+ DD PP
Sbjct: 208 GGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRA--LDDKPP 265
Query: 133 KMGEPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSA-APASGGPGGRAG 191
P G R P + PP P P VP S+ AP P R G
Sbjct: 266 PPPPPVGNR---PSIHREAVPPPP---PQNNKPP--VPSTPRPSASSQAPPPPPPPSRPG 317
Query: 192 P---CFDQHGGQQSPGM---GMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSR 245
P G ++P + + S+S +PG PL P PG S
Sbjct: 318 PPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSG 377
Query: 246 P 246
P
Sbjct: 378 P 378
Score = 34.7 bits (78), Expect = 1.1
Identities = 35/135 (25%), Positives = 51/135 (37%), Gaps = 12/135 (8%)
Query: 1092 PPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQ 1151
PP D K P PP N S+ P N+ VP +P + P
Sbjct: 253 PPTPSRALDDKPPPP--PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP 310
Query: 1152 MTPMQGGRSSTISVHDPFSDVSDSS--FPKRN-SMTPNAPYQQGMSMPDVMGRMPYEPNK 1208
P + G P S +D + P+RN S++ + P + P G +P P++
Sbjct: 311 PPPSRPGPPPL----PPSSSGNDETPRLPQRNLSLSSSTP---PLPSPGRSGPLPPPPSE 363
Query: 1209 DPFGGMRKVPGSSEP 1223
P +R PG S P
Sbjct: 364 RPPPPVRDPPGRSGP 378
Score = 34.7 bits (78), Expect = 1.1
Identities = 38/168 (22%), Positives = 60/168 (35%), Gaps = 40/168 (23%)
Query: 1089 EEPPPEVFSTGDTKKQPKLQPPSPANSGSLQGPQTPQ-------------STGSNSMAEV 1135
+ PPP +P P P++SG+ + P+ PQ S G +
Sbjct: 305 QAPPPP-----PPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPP 359
Query: 1136 PGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSM 1195
P +PP P P GRS + P S + S + TP P + G+
Sbjct: 360 PPSERPPPPVRDP--------PGRSGPLPPPPPVS--RNGSTSRALPATPQLPSRSGVDS 409
Query: 1196 PDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSP 1243
P R P P++ G P P++S+++ + SP
Sbjct: 410 PRSGPRPPLPPDRPSAGAPPPPP------------PSTSIRNGFQDSP 445
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 96.7 bits (239), Expect = 2e-19
Identities = 199/787 (25%), Positives = 245/787 (31%), Gaps = 167/787 (21%)
Query: 92 PGPDMEQPQHGGAKDSAAGGQADPPGPP----LLSKPGDEDDAPPKMGEPAGGRYEHPGL 147
PGP G G PPGPP L PG + D P G+P G PGL
Sbjct: 759 PGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPN-GQP--GPMGPPGL 815
Query: 148 GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM 207
+G Q PP P G GP P + G G PG G + SPG+
Sbjct: 816 PGIGVQGPPG--PPGIPGPIGQPGLHGIPGE----KGDPGPPGLDVPGPPGERGSPGI-- 867
Query: 208 MHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG--GGSGGG 265
GAPG + P P S PG PG G G G G G G
Sbjct: 868 --------PGAPGPIGP--------PGS-----PGL--PGKAGASGFPGTKGEMGMMGPP 904
Query: 266 GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPG 325
G G G G G G G GS G+ P ++ G
Sbjct: 905 GPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKG 964
Query: 326 GGGAASLSKAAAGSAAGGFQRFAGQNQHPS-GATPTL--------------NQLLTSPSP 370
G L S G+Q G P P L L P
Sbjct: 965 EKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPG 1024
Query: 371 MMRSYGG-SYPEYSSPSAPPPP---PSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYA 426
+ + G +P PP P P QP S G + +GL G +
Sbjct: 1025 LKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGE 1084
Query: 427 AASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSP 486
P + PG PG +GS DP L G+ P ++ Q P
Sbjct: 1085 PGLPGY------------PGNPG-----IKGSVGDP------GLPGLPGTPGAKGQPGLP 1121
Query: 487 YPGGSYGPPGPQRY--PIGIQG--RTPGAMAGMQYPQQQMPP----QYGQQGVSGYC-QQ 537
G+ GPPGP+ P G G PG + G +P Q PP + GQ G+ G Q+
Sbjct: 1122 GFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQK 1181
Query: 538 GQ--QPYYSQQPQPPHLP--------------PQAQYLPSQSQQRYQPQQDMSQEGYGTR 581
G+ QP + P PP LP P LP P+ + G+
Sbjct: 1182 GEPGQPGFG-NPGPPGLPGLSGQKGDGGLPGIPGNPGLPG-------PKGEPGFHGFPGV 1233
Query: 582 SQPPLAPGKPNHE---------------DLNLIQQERPSSLPDLSGSIDDLPTGTEATLS 626
PP PG P L E P LP G + + L
Sbjct: 1234 QGPPGPPGSPGPALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLP 1293
Query: 627 SAVSASGSTSSQGDQSNPAQSPFS-PHASPHLSSIPGGPS-PSPVGSPVGSNQSRSGPIS 684
G G Q NP + + P L +PG P P G P G
Sbjct: 1294 GLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVP--------GSAG 1345
Query: 685 PASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMS 744
P PG PP PPG S + P G + P GPQ GP
Sbjct: 1346 PEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLP-----GPQ--GPQGL 1398
Query: 745 PHPS--PGGQMHAGISSFQ-------------QSNSSGTYGPQMSQYGPQGNYSRPPAYS 789
P P+ PG G+ F Q + G GP GP G PP
Sbjct: 1399 PGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPP----GPDG-LQGPPGPP 1453
Query: 790 GVPSASY 796
G S ++
Sbjct: 1454 GTSSVAH 1460
Score = 95.5 bits (236), Expect = 5e-19
Identities = 210/853 (24%), Positives = 275/853 (32%), Gaps = 132/853 (15%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDE-------------D 128
L G G PGP H D + PPGPP PGD+ D
Sbjct: 424 LDGQPGAPGLPGPPGPAGPHIPPSDEIC--EPGPPGPP--GSPGDKGLQGEQGVKGDKGD 479
Query: 129 DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG--------GGGGPAAVPEFNNYYGSAA 180
+G G PGL L + PG G GP +P G A
Sbjct: 480 TCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPG--A 537
Query: 181 PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMD-PLQNSHEGYPNSQCNH 239
P G G G G + G S A G PG P Q+ G P +
Sbjct: 538 PGFPGSKGEPGDILTFPGMKGDKG----ELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEP 593
Query: 240 ----YPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
+ G P G G G G G G G G G VA G
Sbjct: 594 GGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKG 653
Query: 296 GGG------------GYGGSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLSKAAAGSAAG 342
G G G G+ P G + G PG G + G
Sbjct: 654 DPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPG 713
Query: 343 --GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGG--SYPEYSSPSAPPPPPSQPQSQ 398
GF G P GA T ++ P + G P ++ P PP PP P +
Sbjct: 714 PKGFPGIPG----PPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPG-PPGPPGLPGFK 768
Query: 399 AAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGS 458
A G G G+ G + P PG PG + G
Sbjct: 769 GALGPKGDRGFPGPPGPP-GRT-GLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGP 826
Query: 459 PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSY--GPPGPQRYPIGIQGRTPGAMAGMQ 516
P P + +P L+G+ ++ P P G GPPG + P GI G PG +
Sbjct: 827 PGIPGPIGQPGLHGIPG------EKGDPGPPGLDVPGPPGERGSP-GIPG-APGPIGPPG 878
Query: 517 YPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQY--LPSQSQQRYQPQQDMS 574
P +P + G G G + P P +P ++ L + QP
Sbjct: 879 SPG--LPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGP 936
Query: 575 QEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGS 634
G++ +P L PG P D NL+ + P L G + G
Sbjct: 937 TGEKGSKGEPGL-PGPPGPMDPNLLGSKGEKGEPGLPG------------IPGVSGPKGY 983
Query: 635 TSSQGDQSNPAQS-------PFSPHASPHLSSIPGGPSPSPVGSPVGSN-----QSRSGP 682
GD P S P P +P L PG P + +G Q GP
Sbjct: 984 QGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGP 1043
Query: 683 ISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTG-- 740
P+ +PG P PG + + P +S +P + G + P + Y P G
Sbjct: 1044 PGPSGVPGQPGSPGLPGQKGDKGD-PGISSIGLPG----LPGPKGEPGLPGY-PGNPGIK 1097
Query: 741 -----PSMSPHP-SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSA 794
P + P +PG + G+ F GT GP GP+G S PP G+P
Sbjct: 1098 GSVGDPGLPGLPGTPGAKGQPGLPGFP-----GTPGPP----GPKG-ISGPPGNPGLPGE 1147
Query: 795 SYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPS-AGMQNRPF-PGNMSSMTPSSPGM 852
PGP G Q GP G +P AG + P PG + P PG+
Sbjct: 1148 ----PGPVGGGGHPGQ---PGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGL 1200
Query: 853 SQQGGPGMGPPMP 865
S Q G G P +P
Sbjct: 1201 SGQKGDGGLPGIP 1213
Score = 71.6 bits (174), Expect = 8e-12
Identities = 201/866 (23%), Positives = 256/866 (29%), Gaps = 157/866 (18%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP----LLSKPGD--EDDAPPKMGEP 137
GA G PG + + + G G PPGPP + +PG P G P
Sbjct: 114 GAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNP 173
Query: 138 AGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
+PG + P +PG G P G P GP G GP +
Sbjct: 174 G-----YPGPPGIQGLPGPTGIPGPIGPPGPP-------GLMGPP--GPPGLPGPKGNMG 219
Query: 198 GGQQSPGMGMMHSASAAAAGAPGSMDP--------LQNSHEGYPNSQCNHYPGYSRPGAG 249
Q P G PG + Q +G P + P PG
Sbjct: 220 LNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGP----PGIR 275
Query: 250 GGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV 309
G G GG G G G G G G G G G G G
Sbjct: 276 GPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGD 335
Query: 310 LSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPS 369
P G +++ G G K G G G+ P P
Sbjct: 336 TGPPGPPG--LVIPRPGTGITIGEKGNIGLP--GLPGEKGERGFPGIQGPP--------- 382
Query: 370 PMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAAS 429
G P ++ PP PP P + G GL GA
Sbjct: 383 ------GLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGP 436
Query: 430 PAWAAAQ-QRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYP 488
P A S PG PGP GSP D + + G + +
Sbjct: 437 PGPAGPHIPPSDEICEPGPPGPP-----GSPGDKGLQGEQGVKGDKGDTCFNCIGT---- 487
Query: 489 GGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQ 548
G GPPG P G+ G PG++ P Q G++G +G P P
Sbjct: 488 -GISGPPGQPGLP-GLPG-PPGSLG--------FPGQKGEKGQAGATGPKGLPGIPGAPG 536
Query: 549 PPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPS--- 605
P P ++ P + D + G P PG P + L + +
Sbjct: 537 APGFPG-SKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGG 595
Query: 606 -------------SLPDLSGSIDDL---------PTGTEATLSSAVSASGSTSSQGDQSN 643
LP L G+I + P G E + G G + +
Sbjct: 596 ITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVG-EKGIQGVAGNPGQPGIPGPKGD 654
Query: 644 PAQSPFSPH-----------------ASPHLSSIPGGPS-PSPVGSPVGSNQSRSGPISP 685
P Q+ P P L PG P P G P GP P
Sbjct: 655 PGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGP 714
Query: 686 ASIPGSQMPPQPPGSQSE--SSSHPALSQSPMPQ-ERGF-MAGTQRNPQMAQY----GPQ 737
PG PP PG+ P P P+ E GF + G P + + GP+
Sbjct: 715 KGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGALGPK 774
Query: 738 QTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYS 797
G P P PG G+ G GP Q GP G PP G+
Sbjct: 775 --GDRGFPGP-PGPPGRTGLDGL--PGPKGDVGPN-GQPGPMG----PPGLPGIGVQGPP 824
Query: 798 GPGPGMGISANNQMHG----QGPSQPCG---AVPLGRMPSAGMQNRPFPGNMSSMTPSSP 850
GP G +HG +G P G P G S G+ P P P SP
Sbjct: 825 GPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIG----PPGSP 880
Query: 851 GMSQQGG----PG-------MGPPMP 865
G+ + G PG MGPP P
Sbjct: 881 GLPGKAGASGFPGTKGEMGMMGPPGP 906
Score = 63.2 bits (152), Expect = 3e-09
Identities = 106/421 (25%), Positives = 121/421 (28%), Gaps = 127/421 (30%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
G GG QPGP E+ + G GQ PG P PG
Sbjct: 1152 GGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGP----------------- 1194
Query: 144 HPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSP 203
PGL L Q+ +PG G P G PG + P F G Q P
Sbjct: 1195 -PGLPGLSGQKGDGGLPGIPGNP-----------------GLPGPKGEPGFHGFPGVQGP 1236
Query: 204 GMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGG--GGGGG 261
G PGS P +G P Q PG RPG G G G G GG
Sbjct: 1237 ------------PGPPGSPGPALEGPKGNPGPQ--GPPG--RPGLPGPEGPPGLPGNGGI 1280
Query: 262 SGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQG-GGM 320
G G G G G G G G+ +P + G GM
Sbjct: 1281 KGEKGNPGQPGLPGL---------------------PGLKGDQGPPGLQGNPGRPGLNGM 1319
Query: 321 MMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYP 380
PG G GF G + P A P P
Sbjct: 1320 KGDPGLPGVP------------GFPGMKGPSGVPGSAGPE-----------------GEP 1350
Query: 381 EYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSH 440
P PP P P Q+ AG GL G Q P
Sbjct: 1351 GLIGPPGPPGLPG-PSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPG--------- 1400
Query: 441 PAMSPGTPG----PTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPG 496
P PG PG P + G DP G+ P ++ P P G GPPG
Sbjct: 1401 PTGPPGDPGRNGLPGFDGAGGRKGDP---------GLPGQPGTRGLDGPPGPDGLQGPPG 1451
Query: 497 P 497
P
Sbjct: 1452 P 1452
Score = 59.7 bits (143), Expect = 3e-08
Identities = 165/686 (24%), Positives = 217/686 (31%), Gaps = 141/686 (20%)
Query: 230 EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAA 289
EG+P PG+ P G G G G G G G G G
Sbjct: 56 EGHPG-----LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMP 110
Query: 290 AAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAG 349
G G G G + G P G + GP G K GS G
Sbjct: 111 GHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSII--MSSLPG 168
Query: 350 QNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQ 409
+P P Q L P+ + G P PP PP P G
Sbjct: 169 PKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPP--GLMGPPGPPGLP------------GP 214
Query: 410 QAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQ 469
+ G+ G + Q P PG PG Q P+D K Q
Sbjct: 215 KGNMGLNFQGPKGEK---------GEQGLQGP---PGPPGQIS--EQKRPIDVEFQKGDQ 260
Query: 470 LYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQ 529
G+ + + P P G GPPGP PG G + +Q P + G+
Sbjct: 261 --GLPGD------RGPPGPPGIRGPPGP-----------PGGEKG-EKGEQGEPGKRGKP 300
Query: 530 GVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPG 589
G G + QP P LP Y P + P +D ++G + PP PG
Sbjct: 301 GKDGE---------NGQPGIPGLPGDPGY-PGE------PGRD-GEKGQKGDTGPPGPPG 343
Query: 590 K--PNHEDLNLIQQERPSSLPDLSGSIDDL-------PTGTEATLSSAVSAS-------G 633
P I ++ LP L G + P G +AV G
Sbjct: 344 LVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPG 403
Query: 634 STSSQGDQSNPAQSPFSPHASPHLSSIPGGPS-PSPVGSPVGSNQSRSGPISPASIPGSQ 692
+GD+ P S P P L PG P P P G P G + S I PG
Sbjct: 404 ERGQKGDEGPPGISIPGP---PGLDGQPGAPGLPGPPG-PAGPHIPPSDEICE---PG-- 454
Query: 693 MPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPH----PS 748
PP PPGS + + E+G + G + + G +GP P P
Sbjct: 455 -PPGPPGSPGDKG---------LQGEQG-VKGDKGDTCFNCIGTGISGPPGQPGLPGLPG 503
Query: 749 PGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISAN 808
P G + ++ + T GP+G P A G P S PG ++
Sbjct: 504 PPGSLGFPGQKGEKGQAGAT--------GPKGLPGIPGA-PGAPGFPGSKGEPGDILTFP 554
Query: 809 NQMHGQGPSQPCGAVPLGRMPSA----GMQNRPFP-GNMSSMT-------PSSPGM---- 852
+G GA L +P G+ P P G +T P +PG+
Sbjct: 555 GMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLP 614
Query: 853 ---SQQGGPGMGPPMPTVNRKAQEAA 875
G PG GPP P + Q A
Sbjct: 615 GNIGPMGPPGFGPPGPVGEKGIQGVA 640
Score = 46.2 bits (108), Expect = 3e-04
Identities = 63/230 (27%), Positives = 70/230 (30%), Gaps = 38/230 (16%)
Query: 79 NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDE----------- 127
+ L G G PGP E HG G PGP L G+
Sbjct: 1206 DGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGL 1265
Query: 128 --DDAPPKMGEPAG--------GRYEHPGLGALGTQQPPVAVPGGGGGPA---------- 167
+ PP + G G+ PGL L Q P + G G P
Sbjct: 1266 PGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGL 1325
Query: 168 -AVPEFNNYYG-SAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPL 225
VP F G S P S GP G G G PG AG PG P
Sbjct: 1326 PGVPGFPGMKGPSGVPGSAGPEGEPG-LIGPPGPPGLPGPSGQSIIIKGDAGPPGI--PG 1382
Query: 226 QNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGG 275
Q +G P Q G P G G G G G GG G G G
Sbjct: 1383 QPGLKGLPGPQGPQ--GLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPG 1430
Score = 40.4 bits (93), Expect = 0.019
Identities = 69/295 (23%), Positives = 92/295 (31%), Gaps = 36/295 (12%)
Query: 620 GTEATLSSAVSASGSTSSQGDQSNPA-------QSPFSPHASPHLSSIPGGPSPSPVGSP 672
G++ S G G + +P + P P IPG P P + P
Sbjct: 35 GSKCDCSGIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGP 94
Query: 673 VGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGF--MAGTQRNPQ 730
G P +PG PG Q + + P GF + G P
Sbjct: 95 PGLPGFPGTP----GLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPG 150
Query: 731 MAQYGPQQTGPSMSPHPSP-GGQMHAGISSFQ-QSNSSGTYGPQMSQYGPQGNYSRPPAY 788
+ + MS P P G + G Q +G GP GP G PP
Sbjct: 151 IPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGP----IGPPG----PPGL 202
Query: 789 SGVPSASYSGPGPGM-GISANNQMHGQGPSQPCGAV----PLGRMPSAGMQNRPFPGNMS 843
G P GP PG+ G N ++ QGP G P G Q RP
Sbjct: 203 MGPP-----GP-PGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQ 256
Query: 844 SMTPSSPG-MSQQGGPGM-GPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGM 896
PG G PG+ GPP P K ++ + + PG+
Sbjct: 257 KGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGI 311
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 96.3 bits (238), Expect = 3e-19
Identities = 232/980 (23%), Positives = 316/980 (32%), Gaps = 236/980 (24%)
Query: 115 PPGP--PLLSKPGDEDDAPPKMG---EPAGGRYE-HPGLGALGTQQPPVAVPGGGGGPAA 168
PPGP P +S G+ PP +G EP G H L A G Q PV
Sbjct: 44 PPGPVDPAMSALGE----PPILGMNMEPYGFHARGHSELHAGGLQAQPV----------- 88
Query: 169 VPEFNNYYGSAAPASGGPGG----RAGPCFDQHGGQQSPGMGMMHSAS----AAAAGAPG 220
+ ++G P G PG + P F + G PG +H AAG G
Sbjct: 89 ----HGFFGGQQPHHGHPGSHHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAGGLG 144
Query: 221 SMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGG------------SGGGGGG 268
S P +E SQ G RPG G +
Sbjct: 145 SQPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFH 204
Query: 269 GGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSP-------------RQ 315
G + G+ + ++ A G + +G+ + SP RQ
Sbjct: 205 GLPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAAGRQ 264
Query: 316 QGGGMMMG----PGGGGAASLSKAAAGSAAGG-----------------FQRFAGQNQHP 354
GG G P G LSK A F+RF+G + P
Sbjct: 265 VPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSGARKMP 324
Query: 355 SGATPTLNQ---LLTSPS---PMMRSYGGSYPEYSSPSAPPP--------PPSQPQSQAA 400
G P++ L+ P P + P P PP PP+ P+ Q
Sbjct: 325 VGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQG 384
Query: 401 AAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQ---- 456
AG +GG Q M + +Y + S P S P P +Q
Sbjct: 385 EAGTPSGGLQDGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQH 444
Query: 457 -GSPMDPMVMKRPQLYGMGS------------------NPHSQPQQSSPYPG--GSYGPP 495
+P V KRP+ GS + H P S YPG G + PP
Sbjct: 445 FDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSP---SAYPGLPGEFTPP 501
Query: 496 GPQRYPIG--IQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLP 553
P +P G +Q P + Q QQQ Q QQ QQ QQ QQ Q +
Sbjct: 502 VPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQ------QQQQQQQQQQQQQRQNAA 555
Query: 554 PQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGS 613
+ + S++QQ+ Q +++Q G+ PG G
Sbjct: 556 LMIKQMASRNQQQRLRQPNLAQLGH---------PGDVGQ-----------------GGL 589
Query: 614 IDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPV 673
+ P G A + GST + + Q+P S S GP P P G +
Sbjct: 590 VHGGPVGGLAQ-PNFEREGGSTGAGRLGTFEQQAPHLAQESAWFS----GPHPPP-GDLL 643
Query: 674 GSNQSRSG-PISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMA 732
SG P S PP PPG L + P+ QE M G P +
Sbjct: 644 PRRMGGSGLPADCGPHDPSLAPPPPPGGSG------VLFRGPL-QEPMRMPGEGHVPAL- 695
Query: 733 QYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVP 792
PSPG Q + Q S P A G+P
Sbjct: 696 --------------PSPGLQFGGSLGGLGQLQS-------------------PGAGVGLP 722
Query: 793 SASYS--GPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSP 850
SA+ P P SA + GQ P P GA AG Q+ P G + PS+
Sbjct: 723 SAASERRPPPPDFATSA---LGGQ-PGFPFGA--------AGRQSTPHSGPGVNSPPSAG 770
Query: 851 GMSQQGGPGMG----PPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSS 906
G G G G PP P + +Q +A+ + A + + ++ S + +A+ S
Sbjct: 771 GGGGSSGGGGGGGAYPPQPDF-QPSQRTSASKLGALSLGSFNKPSSKDNLFGQSCLAALS 829
Query: 907 PYSQPM------NNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKAD 960
Q M N + N + PP N + G A +PG P
Sbjct: 830 TACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETD---GAAVAGNPGSDYFP-----G 881
Query: 961 GKEEGTPQPESKSKKSSSST 980
G G P P S SSS +
Sbjct: 882 GTAPGAPGPGGPSGTSSSGS 901
Score = 95.1 bits (235), Expect = 7e-19
Identities = 168/663 (25%), Positives = 217/663 (32%), Gaps = 145/663 (21%)
Query: 40 HHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSL----------------- 82
H H +LQQQ Q QQQQQQQQQQQQQQQQQQ N +L
Sbjct: 514 HPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQP 573
Query: 83 ------------------GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKP 124
GG GG QP + E GG+ + G + P L +
Sbjct: 574 NLAQLGHPGDVGQGGLVHGGPVGGLAQPNFERE----GGSTGAGRLGTFEQQAPHLAQES 629
Query: 125 GDEDDAPPKMGEPAGGRYEHPGLGA-LGTQQP---PVAVPGGGG----GPAAVPEFNNYY 176
P G+ R GL A G P P PGG G GP P
Sbjct: 630 AWFSGPHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGE 689
Query: 177 GSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQ 236
G PA PG + G G QSPG G + SAA+ P D ++ G P
Sbjct: 690 GH-VPALPSPGLQFGGSLGGLGQLQSPGAG-VGLPSAASERRPPPPDFATSALGGQPGFP 747
Query: 237 CNHYPGYSRPGAGGGGGG--GGGGGGGSGGGGGGGGA------------------GAGGA 276
S P +G G GGGGGS GGGGGGGA GA
Sbjct: 748 FGAAGRQSTPHSGPGVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSL 807
Query: 277 GA----------------GAVAAAAAAAAAAAGG--------------GGGGGYGGSSAG 306
G+ A++ A A+ G G + G
Sbjct: 808 GSFNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDG 867
Query: 307 YGVLSSPRQQ---GGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQ 363
V +P GG PG GG + S ++GS A G Q S +P
Sbjct: 868 AAVAGNPGSDYFPGGTAPGAPGPGGPSGTS--SSGSKASGPPNPPAQGDGTS-LSPNYTL 924
Query: 364 LLTSPSPMMRSYGGS-------------------YPEYSSPSAPPPPPSQPQSQAAAAGA 404
TS + GG + +YS+ P Q A+GA
Sbjct: 925 ESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGAPGVSPGQQQASGA 984
Query: 405 AAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQ---RSHPAMSPGTPG--------PTMG 453
A GG ++AG G + A SP+W + P + G P +G
Sbjct: 985 AVGG--SSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVG 1042
Query: 454 RSQGSPMDPMVMKRPQLYGMGSNPHSQPQQS-SPYPGGS--YGPPGPQRYPIGIQGRTPG 510
+ ++ NP + + S SP GS P G G + P
Sbjct: 1043 EFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAPPPA 1102
Query: 511 AMAGMQYPQQQMPPQYGQQGVSGY-----CQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQ 565
G+ P YG G G+ +Q + P S PP + L +Q Q
Sbjct: 1103 LGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLEILQAQIQL 1162
Query: 566 RYQ 568
+ Q
Sbjct: 1163 QRQ 1165
Score = 82.8 bits (203), Expect = 3e-15
Identities = 181/796 (22%), Positives = 249/796 (31%), Gaps = 114/796 (14%)
Query: 173 NNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM------------MHSASAAAAGAPG 220
N ++ + A +GGP G P G GM M +H+ A G
Sbjct: 31 NTHFKAPAFHTGGPPGPVDPAMSALGEPPILGMNMEPYGFHARGHSELHAGGLQAQPVHG 90
Query: 221 SMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGA 280
Q H G+P S H+P P GG GG G GG G GA G G G+
Sbjct: 91 FFGG-QQPHHGHPGS---HHPHQHHPHFGGNFGGPDPGASCLHGGRLLGYGGAAG-GLGS 145
Query: 281 VAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSA 340
A A G +G G + P G L ++ +A
Sbjct: 146 QPPFAEGYEHMAESQGPESFGPQRPG----NLPDFHSSGASSHAVPAPCLPLDQSPNRAA 201
Query: 341 A-GGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPE-YSSPSAPPPPPSQPQSQ 398
+ G +G + H NQ + + +Y G P + +P Q
Sbjct: 202 SFHGLPSSSGSDSHSLEPRRVTNQ--GAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHY 259
Query: 399 AAAAGAAAGGQQAAAGMGLGKDM-GAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQG 457
AA G A+ M M G A P QQ+ P G R G
Sbjct: 260 AAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQHGVFFERFSG 319
Query: 458 SPMDPMVMKRPQLYGMGS-NPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQ 516
+ P+ ++ +GS +P QP Q + PP PQ+ P Q
Sbjct: 320 ARKMPVGLEP----SVGSRHPLMQPPQQA--------PPPPQQQP------------PQQ 355
Query: 517 YPQQQMPPQYGQQGVSGYCQQG-QQPYYSQQPQPP-HLPPQAQYLPSQSQQRYQPQQDMS 574
PQQQ PP G C +P + P L LPSQ Q P +
Sbjct: 356 PPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEYPIHRLE 415
Query: 575 QEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGS 634
S+P + +Q P P+ D P GS
Sbjct: 416 NRSMHPYSEPVFS-----------MQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGS 464
Query: 635 ------TSSQGDQSNPAQSPFSPHASPHLSSIPGGPS----PSPVGSPVGSNQSRSGPIS 684
S G N A H SP S+ PG P P P P G P
Sbjct: 465 AGVDRCASWNGSMHNGA---LDNHLSP--SAYPGLPGEFTPPVPDSFPSGPPLQHPAP-D 518
Query: 685 PASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMS 744
S+ Q Q Q + Q ++ + Q + Q +Q +
Sbjct: 519 HQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQL 578
Query: 745 PHP---SPGGQMHAG-ISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPG 800
HP GG +H G + Q N G + G G + + + SA +SGP
Sbjct: 579 GHPGDVGQGGLVHGGPVGGLAQPNFEREGG--STGAGRLGTFEQQAPHLAQESAWFSGPH 636
Query: 801 PGMGISANNQMHGQG--------------PSQPCGAVPLGRMPSAGMQNRPFPGNMSSMT 846
P G +M G G P P G+ L R P P G++ ++
Sbjct: 637 PPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRMPGEGHVPALP 696
Query: 847 P-------SSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQS 899
S G+ Q PG G +P+ AA+ + A S G PG
Sbjct: 697 SPGLQFGGSLGGLGQLQSPGAGVGLPS-------AASERRPPPPDFATSALGGQPGFPFG 749
Query: 900 GLMASSSPYSQPMNNS 915
S+P+S P NS
Sbjct: 750 AAGRQSTPHSGPGVNS 765
Score = 68.2 bits (165), Expect = 9e-11
Identities = 125/504 (24%), Positives = 179/504 (35%), Gaps = 69/504 (13%)
Query: 83 GGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRY 142
GG+ GG Q ++ P G SAA + PP S G + P A GR
Sbjct: 703 GGSLGGLGQ----LQSPGAGVGLPSAASERRPPPPDFATSALGGQPGFP----FGAAGRQ 754
Query: 143 EHPGLGALGTQQPPVA-----VPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
P G G PP A GGGGG A P ++ S ++ G + F++
Sbjct: 755 STPHSGP-GVNSPPSAGGGGGSSGGGGGGGAYPPQPDFQPSQRTSASKLGALSLGSFNKP 813
Query: 198 GGQQSP-GMGMMHSASAA------AAGAP-------------GSMDPLQNSHEGYP---N 234
+ + G + + S A + GAP G QN +G N
Sbjct: 814 SSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKRKLSQNETDGAAVAGN 873
Query: 235 SQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG----GAGAGGAGAGAVAAAAAAAAA 290
+++PG + PGA G GG G GS G G G + + + +
Sbjct: 874 PGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPAQGDGTSLSPNYTLESTSGNDGK 933
Query: 291 AAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLS---KAAAGSAAGGFQRF 347
GGGG G G G +S P P GGA +S + A+G+A GG
Sbjct: 934 PVSGGGGRGRGRRKRDSGHVS-PGTFFDKYSAAPDSGGAPGVSPGQQQASGAAVGGSS-- 990
Query: 348 AGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAG 407
AG+ + GA + LTSPS G P +S +++
Sbjct: 991 AGETR---GAPTPHEKALTSPS---WGKGAELLLGDQPDLIGSLDGGAKSDSSSPNVGEF 1044
Query: 408 GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKR 467
+ +D + + A A + SP P +G + P P
Sbjct: 1045 ASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLPPRGVGAGEHGPKAP----- 1099
Query: 468 PQLYGMG--SNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQ 525
P G+G SN S P Y GG G PG P Q RTP + +G P + P +
Sbjct: 1100 PPALGLGIMSNSTSTPDS---YGGG--GGPGHPGTPGLEQVRTPTSSSGAPPPDEIHPLE 1154
Query: 526 YGQQGVSGYCQQGQQPYYSQQPQP 549
Q + Q +Q + + QP
Sbjct: 1155 ILQAQI----QLQRQQFSISEDQP 1174
Score = 56.2 bits (134), Expect = 3e-07
Identities = 109/462 (23%), Positives = 164/462 (35%), Gaps = 81/462 (17%)
Query: 1108 QPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHD 1167
Q P + GS Q G N PG AS HG GG + +
Sbjct: 95 QQPHHGHPGSHHPHQHHPHFGGNFGGPDPG-------ASCLHGGRLLGYGGAAGGLGSQP 147
Query: 1168 PFSD----VSDSSFPKRNSMTPNAP------YQQGMS---MPDVMGRMPYEPNKDP-FGG 1213
PF++ +++S P+ S P P + G S +P + PN+ F G
Sbjct: 148 PFAEGYEHMAESQGPE--SFGPQRPGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHG 205
Query: 1214 MRKVPGSSEPFMTQGQMPNSSMQDM--YN---QSPSGAMSNLGMGQRQ-QFPYGASYDRR 1267
+ GS + ++ N D YN ++PSG + Q P+ A+
Sbjct: 206 LPSSSGSDSHSLEPRRVTNQGAVDSLEYNYPGEAPSGHFDMFSPSDSEGQLPHYAA---- 261
Query: 1268 HEPYGQQYPGQG-PPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYS 1326
G+Q PG P + P GL K H PP ++ + Q
Sbjct: 262 ----GRQVPGGAFPGASAMPRAAGMVGLS------KMHAQ----PPQQQPQ----QQQQP 303
Query: 1327 SQQQEMYNQYGGSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSS 1386
QQQ+ + + +SG + P+ G P SR + P Q PP P Q
Sbjct: 304 QQQQQQHGVFFERFSGARKMPV-GLEPSVGSRHPLMQPPQ---QAPPPPQQQPPQQPPQQ 359
Query: 1387 EGPQQNMWAARND-----MPYPYQNRQG-PGGPTQ--APPYPGMNRTDDMMVPDQRINHE 1438
+ P R + +P P Q G P G Q P P + + P R+ +
Sbjct: 360 QPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQFEY--PIHRLENR 417
Query: 1439 SQWPSH-----VSQRQPYMSSSASMQPITRPP------QPSYQTPPSLPNHISRAPSPAS 1487
S P + P + + +Q PP +P + P S + + +
Sbjct: 418 SMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGSAGVDRCASWNGSM 477
Query: 1488 FQRSLENRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPP 1529
+L+N +SPS P LP + P VP S +GPP Q P
Sbjct: 478 HNGALDNHLSPSAYPGLPG----EFTPPVPDSFPSGPPLQHP 515
Score = 53.9 bits (128), Expect = 2e-06
Identities = 206/912 (22%), Positives = 263/912 (28%), Gaps = 191/912 (20%)
Query: 46 HALQQQLNQFQQQQQQQQQQQQQQQQQQHP---ISNNNSL------------GGAGGGAP 90
H L Q Q QQQ QQ QQQ P + NS G GG
Sbjct: 335 HPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQ 394
Query: 91 QPGP-------DMEQPQHGGAKDSA------AGGQADPPGPPLLSKPGDEDDAPPKMGEP 137
GP E P H S PP ++ DAPP M
Sbjct: 395 DGGPMLPSQHAQFEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVA 454
Query: 138 AGGRYEHPGL---------------GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPA 182
R++ PG GAL P A PG G P + + S P
Sbjct: 455 KRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPG--EFTPPVPDSFPSGPPL 512
Query: 183 SG-GPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCN-HY 240
P ++ Q QQ L N Q
Sbjct: 513 QHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQ 572
Query: 241 PGYSRPGAGGGGGGGGGGGGGSGGGGG-------GGGAGAGGAGAGAVAAAAAAAAAAAG 293
P ++ G G G GG GG GG GG GAG G A A +A
Sbjct: 573 PNLAQLGHPGDVGQGGLVHGGPVGGLAQPNFEREGGSTGAGRLGTFEQQAPHLAQESA-- 630
Query: 294 GGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQH 353
+ G G L R G G+ P G S A G F G Q
Sbjct: 631 -----WFSGPHPPPGDLLPRRMGGSGL---PADCGPHDPSLAPPPPPGGSGVLFRGPLQE 682
Query: 354 PSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAA 413
P P + PSP ++ +GGS G Q A
Sbjct: 683 PM-RMPGEGHVPALPSPGLQ-FGGSL-----------------------GGLGQLQSPGA 717
Query: 414 GMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGM 473
G+GL AA+++R P P +G G P G
Sbjct: 718 GVGLPS-------------AASERRPPP---PDFATSALGGQPGFPFGAA--------GR 753
Query: 474 GSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQ--MPPQYGQQGV 531
S PHS P +SP G G G + G G YP Q P Q
Sbjct: 754 QSTPHSGPGVNSPPSAGGGG------------GSSGGGGGGGAYPPQPDFQPSQRTSASK 801
Query: 532 SGYCQQGQQPYYSQQPQPPHLPPQA--QYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPG 589
G G +++ +L Q+ L + Q + + PP
Sbjct: 802 LGALSLGS---FNKPSSKDNLFGQSCLAALSTACQNMIASLGAPNLNVTFNKKNPPEGKR 858
Query: 590 KPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSP- 648
K L Q E + + D P GT SG++SS S P P
Sbjct: 859 K-------LSQNETDGAAVAGNPGSDYFPGGTAPGAPGPGGPSGTSSSGSKASGPPNPPA 911
Query: 649 ------FSPHAS-PHLSSIPGGPSPSPVGSPVGSNQSRSGPISP--------ASIPGSQM 693
SP+ + S G P G G + SG +SP A+
Sbjct: 912 QGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRGRRKRDSGHVSPGTFFDKYSAAPDSGGA 971
Query: 694 PPQPPGSQSES------SSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQT------GP 741
P PG Q S SS +P P E+ + + G Q G
Sbjct: 972 PGVSPGQQQASGAAVGGSSAGETRGAPTPHEKALTSPSWGKGAELLLGDQPDLIGSLDGG 1031
Query: 742 SMSPHPSPGGQMHAGISSFQQSNSSGTYGPQ----MSQYGPQG--NYSRPPAYSGVPSAS 795
+ S SP + F S +Y + S PQ SR P +G P
Sbjct: 1032 AKSDSSSPN------VGEFASDEVSTSYANEDEVSSSSDNPQALVKASRSPLVTGSPKLP 1085
Query: 796 YSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQ 855
G G G GP P A+ LG M ++ + G P +PG+ Q
Sbjct: 1086 PRGVGAGE----------HGPKAPPPALGLGIMSNSTSTPDSYGGGGGPGHPGTPGLEQV 1135
Query: 856 GGP--GMGPPMP 865
P G P P
Sbjct: 1136 RTPTSSSGAPPP 1147
Score = 46.2 bits (108), Expect = 3e-04
Identities = 182/868 (20%), Positives = 275/868 (31%), Gaps = 208/868 (23%)
Query: 474 GSNPHS------QPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYG 527
G PH P Q P+ GG++G P P G G + G YG
Sbjct: 94 GQQPHHGHPGSHHPHQHHPHFGGNFGGPDP-----GASCLHGGRLLG-----------YG 137
Query: 528 QQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQ-----DMSQEGYGTRS 582
G +G QPP SQ + + PQ+ D G + +
Sbjct: 138 --GAAG----------GLGSQPPFAEGYEHMAESQGPESFGPQRPGNLPDFHSSGASSHA 185
Query: 583 QPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQS 642
P AP P + N LP SGS T AV S + G+
Sbjct: 186 VP--APCLPLDQSPNRAASFH--GLPSSSGSDSHSLEPRRVTNQGAVD-SLEYNYPGEAP 240
Query: 643 NPAQSPFSPHAS----PHLSS---IPGGPSPSPVGSP-----VGSNQSRSGPISPASIPG 690
+ FSP S PH ++ +PGG P P VG ++ + P P P
Sbjct: 241 SGHFDMFSPSDSEGQLPHYAAGRQVPGGAFPGASAMPRAAGMVGLSKMHAQP--PQQQPQ 298
Query: 691 SQMPPQPPGSQ--------SESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPS 742
Q PQ Q S + P + + M Q+ P Q P Q P
Sbjct: 299 QQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQ 358
Query: 743 MSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPG 802
P P P G+ Q S PQ + +G PS GP
Sbjct: 359 QQPPPPP------GLLVRQNSCPPALPRPQQGE-------------AGTPSGGLQDGGPM 399
Query: 803 MGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGP 862
+ PSQ P ++NR SM P S + P P
Sbjct: 400 L------------PSQHAQF----EYPIHRLENR-------SMHPYSEPVFSMQHP---P 433
Query: 863 PMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMAS--SSPYSQPMNNSSSLMN 920
P N++ Q A N A+ + FPG AS S ++ ++N S
Sbjct: 434 PQQAPNQRLQHFDAPPYM---NVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSA 490
Query: 921 TQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQPESKSKKSSSST 980
P P + +S + L +P L + +++ Q + + ++
Sbjct: 491 YPGLPGEFTPPVPDSFPSGPPLQHP-APDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQ 549
Query: 981 TTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIG 1040
+ ++ + +++ L + G VG+ L V +G
Sbjct: 550 QRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGD-------VGQGGL------VHGGPVG 596
Query: 1041 GLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGD 1100
GLAQ N ++ +GT A L ++ + G PPP
Sbjct: 597 GLAQPNFEREGGSTGAG-RLGTFEQQAPHLAQESAWF---------SGPHPPP------- 639
Query: 1101 TKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRS 1160
G P+ G + + P D P P+ P P GG
Sbjct: 640 -------------------GDLLPRRMGGSGL---PADCGPHDPSLAP----PPPPGG-- 671
Query: 1161 STISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKD-PFGGMRKVPG 1219
+ + P Q+ M MP G +P P+ FGG G
Sbjct: 672 --------------------SGVLFRGPLQEPMRMPGE-GHVPALPSPGLQFGGSLGGLG 710
Query: 1220 SSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPG-Q 1278
+ +P+++ + + P + +G + FP+GA+ R+ P+ PG
Sbjct: 711 QLQSPGAGVGLPSAASE---RRPPPPDFATSALGGQPGFPFGAA-GRQSTPHSG--PGVN 764
Query: 1279 GPPS----GQPPYGGHQPGLYPQQPNYK 1302
PPS G GG G YP QP+++
Sbjct: 765 SPPSAGGGGGSSGGGGGGGAYPPQPDFQ 792
Score = 41.6 bits (96), Expect = 0.009
Identities = 33/102 (32%), Positives = 40/102 (39%), Gaps = 14/102 (13%)
Query: 58 QQQQQQQQQQQQQQQQHPISNNNSLG----------GAGGGAPQPGPDMEQPQHGGAKDS 107
QQQ QQQQQ QQQQQQH + G G P P + P +
Sbjct: 294 QQQPQQQQQPQQQQQQHGVFFERFSGARKMPVGLEPSVGSRHPLMQPPQQAPPPPQQQPP 353
Query: 108 AAGGQADPPGPP-LLSKPGDEDDAPPKMGEPAGGRYEHPGLG 148
Q PP PP LL + ++ PP + P G P G
Sbjct: 354 QQPPQQQPPPPPGLLVR---QNSCPPALPRPQQGEAGTPSGG 392
Score = 33.1 bits (74), Expect = 3.1
Identities = 81/347 (23%), Positives = 117/347 (33%), Gaps = 83/347 (23%)
Query: 1246 AMSNLG----MGQRQQFPYG---ASYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQ 1298
AMS LG +G + PYG + H Q P G GQ P+ GH +P Q
Sbjct: 51 AMSALGEPPILGMNME-PYGFHARGHSELHAGGLQAQPVHGFFGGQQPHHGHPGSHHPHQ 109
Query: 1299 PNYKRHMDGMYGPP----AKRHEGDMYNMQYSSQQQEMYNQYGGSYSGPDRRP------- 1347
+ H G +G P + H G + YGG+ G +P
Sbjct: 110 --HHPHFGGNFGGPDPGASCLHGGRLLG-------------YGGAAGGLGSQPPFAEGYE 154
Query: 1348 --IQGQYPYPYSRERMQGPGQI--------QTHGIPPQMM---GGPLQSSSSEGPQQNMW 1394
+ Q P + +R PG + +H +P + P +++S G +
Sbjct: 155 HMAESQGPESFGPQR---PGNLPDFHSSGASSHAVPAPCLPLDQSPNRAASFHGLPSSSG 211
Query: 1395 AARNDMPYPYQNRQGPGGPTQAPPYPGMNRTD--DMMVPDQRINHESQWPSHVSQRQ--- 1449
+ + + QG + YPG + DM P + E Q P + + RQ
Sbjct: 212 SDSHSLEPRRVTNQGAVDSLEY-NYPGEAPSGHFDMFSPS---DSEGQLPHYAAGRQVPG 267
Query: 1450 ------PYMSSSASM--------QPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENR 1495
M +A M QP + PQ Q H S R +
Sbjct: 268 GAFPGASAMPRAAGMVGLSKMHAQPPQQQPQQQQQPQQQQQQH-GVFFERFSGARKMPVG 326
Query: 1496 MSPSKSPFLPSMKMQKVMPTVPTSQVTGPPP--QPPPIRREITFPPG 1540
+ PS P M+ + P P Q PP QPPP PPG
Sbjct: 327 LEPSVGSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPP-------PPG 366
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 96.3 bits (238), Expect = 3e-19
Identities = 198/785 (25%), Positives = 246/785 (31%), Gaps = 160/785 (20%)
Query: 92 PGPDMEQPQHGGAKDSAAGGQADPPGPP----LLSKPGDEDDAPPKMGEPAGGRYEHPGL 147
PGP G G PPGPP L PG + D P G+P G PGL
Sbjct: 759 PGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPN-GQP--GPMGPPGL 815
Query: 148 GALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGM 207
+G Q PP P G GP P + G G PG G + SPG+
Sbjct: 816 PGIGVQGPPG--PPGIPGPIGQPGLHGIPGE----KGDPGPPGLDVPGPPGERGSPGI-- 867
Query: 208 MHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGG--GGSGGG 265
GAPG + P P S PG PG G G G G G G
Sbjct: 868 --------PGAPGPIGP--------PGS-----PGL--PGKAGASGFPGTKGEMGMMGPP 904
Query: 266 GGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPG 325
G G G G G G G GS G+ P ++ G
Sbjct: 905 GPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKG 964
Query: 326 GGGAASLSKAAAGSAAGGFQRFAGQNQHPS-GATPTL--------------NQLLTSPSP 370
G L S G+Q G P P L L P
Sbjct: 965 EKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPG 1024
Query: 371 MMRSYGG-SYPEYSSPSAPPPP---PSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYA 426
+ + G +P PP P P QP S G + +GL G +
Sbjct: 1025 LKGTIGDMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGE 1084
Query: 427 AASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSP 486
P + PG PG +GS DP L G+ P ++ Q P
Sbjct: 1085 PGLPGY------------PGNPG-----IKGSVGDP------GLPGLPGTPGAKGQPGLP 1121
Query: 487 YPGGSYGPPGPQRY--PIGIQG--RTPGAMAGMQYPQQQMPP----QYGQQGVSGYC-QQ 537
G+ GPPGP+ P G G PG + G +P Q PP + GQ G+ G Q+
Sbjct: 1122 GFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQK 1181
Query: 538 GQ--QPYYSQQPQPPHLP-----------PQAQYLPSQSQQRYQP--------------- 569
G+ QP + P PP LP P P + +P
Sbjct: 1182 GEPGQPGFG-NPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPP 1240
Query: 570 -QQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSA 628
+ EG P PG+P + L E P LP G + + L
Sbjct: 1241 GSPGPALEGPKGNPGPQGPPGRPGFQ--GLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGL 1298
Query: 629 VSASGSTSSQGDQSNPAQSPFS-PHASPHLSSIPGGPS-PSPVGSPVGSNQSRSGPISPA 686
G G Q NP + + P L +PG P P G P G P
Sbjct: 1299 PGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVP--------GSAGPE 1350
Query: 687 SIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPH 746
PG PP PPG S + P G + P GPQ GP P
Sbjct: 1351 GEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLP-----GPQ--GPQGLPG 1403
Query: 747 PS--PGGQMHAGISSFQ-------------QSNSSGTYGPQMSQYGPQGNYSRPPAYSGV 791
P+ PG G+ F Q + G GP GP G PP G
Sbjct: 1404 PTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPP----GPDG-LQGPPGPPGT 1458
Query: 792 PSASY 796
S ++
Sbjct: 1459 SSVAH 1463
Score = 95.5 bits (236), Expect = 5e-19
Identities = 210/853 (24%), Positives = 275/853 (32%), Gaps = 132/853 (15%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDE-------------D 128
L G G PGP H D + PPGPP PGD+ D
Sbjct: 424 LDGQPGAPGLPGPPGPAGPHIPPSDEIC--EPGPPGPP--GSPGDKGLQGEQGVKGDKGD 479
Query: 129 DAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG--------GGGGPAAVPEFNNYYGSAA 180
+G G PGL L + PG G GP +P G A
Sbjct: 480 TCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPG--A 537
Query: 181 PASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMD-PLQNSHEGYPNSQCNH 239
P G G G G + G S A G PG P Q+ G P +
Sbjct: 538 PGFPGSKGEPGDILTFPGMKGDKG----ELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEP 593
Query: 240 ----YPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGG 295
+ G P G G G G G G G G G VA G
Sbjct: 594 GGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKG 653
Query: 296 GGG------------GYGGSSAGYGVLSSPRQQGGGMMMG-PGGGGAASLSKAAAGSAAG 342
G G G G+ P G + G PG G + G
Sbjct: 654 DPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPG 713
Query: 343 --GFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGG--SYPEYSSPSAPPPPPSQPQSQ 398
GF G P GA T ++ P + G P ++ P PP PP P +
Sbjct: 714 PKGFPGIPG----PPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPG-PPGPPGLPGFK 768
Query: 399 AAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGS 458
A G G G+ G + P PG PG + G
Sbjct: 769 GALGPKGDRGFPGPPGPP-GRT-GLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGP 826
Query: 459 PMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSY--GPPGPQRYPIGIQGRTPGAMAGMQ 516
P P + +P L+G+ ++ P P G GPPG + P GI G PG +
Sbjct: 827 PGIPGPIGQPGLHGIPG------EKGDPGPPGLDVPGPPGERGSP-GIPG-APGPIGPPG 878
Query: 517 YPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQY--LPSQSQQRYQPQQDMS 574
P +P + G G G + P P +P ++ L + QP
Sbjct: 879 SPG--LPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGP 936
Query: 575 QEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGS 634
G++ +P L PG P D NL+ + P L G + G
Sbjct: 937 TGEKGSKGEPGL-PGPPGPMDPNLLGSKGEKGEPGLPG------------IPGVSGPKGY 983
Query: 635 TSSQGDQSNPAQS-------PFSPHASPHLSSIPGGPSPSPVGSPVGSN-----QSRSGP 682
GD P S P P +P L PG P + +G Q GP
Sbjct: 984 QGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGP 1043
Query: 683 ISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTG-- 740
P+ +PG P PG + + P +S +P + G + P + Y P G
Sbjct: 1044 PGPSGVPGQPGSPGLPGQKGDKGD-PGISSIGLPG----LPGPKGEPGLPGY-PGNPGIK 1097
Query: 741 -----PSMSPHP-SPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSA 794
P + P +PG + G+ F GT GP GP+G S PP G+P
Sbjct: 1098 GSVGDPGLPGLPGTPGAKGQPGLPGFP-----GTPGPP----GPKG-ISGPPGNPGLPGE 1147
Query: 795 SYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPS-AGMQNRPF-PGNMSSMTPSSPGM 852
PGP G Q GP G +P AG + P PG + P PG+
Sbjct: 1148 ----PGPVGGGGHPGQ---PGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGL 1200
Query: 853 SQQGGPGMGPPMP 865
S Q G G P +P
Sbjct: 1201 SGQKGDGGLPGIP 1213
Score = 71.6 bits (174), Expect = 8e-12
Identities = 201/866 (23%), Positives = 256/866 (29%), Gaps = 157/866 (18%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPP----LLSKPGD--EDDAPPKMGEP 137
GA G PG + + + G G PPGPP + +PG P G P
Sbjct: 114 GAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNP 173
Query: 138 AGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQH 197
+PG + P +PG G P G P GP G GP +
Sbjct: 174 G-----YPGPPGIQGLPGPTGIPGPIGPPGPP-------GLMGPP--GPPGLPGPKGNMG 219
Query: 198 GGQQSPGMGMMHSASAAAAGAPGSMDP--------LQNSHEGYPNSQCNHYPGYSRPGAG 249
Q P G PG + Q +G P + P PG
Sbjct: 220 LNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPGDRGPPGP----PGIR 275
Query: 250 GGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGV 309
G G GG G G G G G G G G G G G
Sbjct: 276 GPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGD 335
Query: 310 LSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPS 369
P G +++ G G K G G G+ P P
Sbjct: 336 TGPPGPPG--LVIPRPGTGITIGEKGNIGLP--GLPGEKGERGFPGIQGPP--------- 382
Query: 370 PMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAAS 429
G P ++ PP PP P + G GL GA
Sbjct: 383 ------GLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGP 436
Query: 430 PAWAAAQ-QRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYP 488
P A S PG PGP GSP D + + G + +
Sbjct: 437 PGPAGPHIPPSDEICEPGPPGPP-----GSPGDKGLQGEQGVKGDKGDTCFNCIGT---- 487
Query: 489 GGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQ 548
G GPPG P G+ G PG++ P Q G++G +G P P
Sbjct: 488 -GISGPPGQPGLP-GLPG-PPGSLG--------FPGQKGEKGQAGATGPKGLPGIPGAPG 536
Query: 549 PPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPS--- 605
P P ++ P + D + G P PG P + L + +
Sbjct: 537 APGFPG-SKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGG 595
Query: 606 -------------SLPDLSGSIDDL---------PTGTEATLSSAVSASGSTSSQGDQSN 643
LP L G+I + P G E + G G + +
Sbjct: 596 ITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVG-EKGIQGVAGNPGQPGIPGPKGD 654
Query: 644 PAQSPFSPH-----------------ASPHLSSIPGGPS-PSPVGSPVGSNQSRSGPISP 685
P Q+ P P L PG P P G P GP P
Sbjct: 655 PGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGP 714
Query: 686 ASIPGSQMPPQPPGSQSE--SSSHPALSQSPMPQ-ERGF-MAGTQRNPQMAQY----GPQ 737
PG PP PG+ P P P+ E GF + G P + + GP+
Sbjct: 715 KGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGALGPK 774
Query: 738 QTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYS 797
G P P PG G+ G GP Q GP G PP G+
Sbjct: 775 --GDRGFPGP-PGPPGRTGLDGL--PGPKGDVGPN-GQPGPMG----PPGLPGIGVQGPP 824
Query: 798 GPGPGMGISANNQMHG----QGPSQPCG---AVPLGRMPSAGMQNRPFPGNMSSMTPSSP 850
GP G +HG +G P G P G S G+ P P P SP
Sbjct: 825 GPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIG----PPGSP 880
Query: 851 GMSQQGG----PG-------MGPPMP 865
G+ + G PG MGPP P
Sbjct: 881 GLPGKAGASGFPGTKGEMGMMGPPGP 906
Score = 61.2 bits (147), Expect = 1e-08
Identities = 105/419 (25%), Positives = 120/419 (28%), Gaps = 120/419 (28%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYE 143
G GG QPGP E+ + G GQ PG P PG
Sbjct: 1152 GGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGP----------------- 1194
Query: 144 HPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSP 203
PGL L Q+ +PG G P G PG + P F G Q P
Sbjct: 1195 -PGLPGLSGQKGDGGLPGIPGNP-----------------GLPGPKGEPGFHGFPGVQGP 1236
Query: 204 GMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSG 263
G PGS P +G P Q PG RPG G G G G
Sbjct: 1237 ------------PGPPGSPGPALEGPKGNPGPQ--GPPG--RPGFQGLPGPEGPPGLPGN 1280
Query: 264 GGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQG-GGMMM 322
GG G G G G G G G+ +P + G GM
Sbjct: 1281 GGIKGEKGNPGQPGL----------------PGLPGLKGDQGPPGLQGNPGRPGLNGMKG 1324
Query: 323 GPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEY 382
PG G GF G + P A P P
Sbjct: 1325 DPGLPGVP------------GFPGMKGPSGVPGSAGPE-----------------GEPGL 1355
Query: 383 SSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPA 442
P PP P P Q+ AG GL G Q P P
Sbjct: 1356 IGPPGPPGLPG-PSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPG---------PT 1405
Query: 443 MSPGTPG----PTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGP 497
PG PG P + G DP G+ P ++ P P G GPPGP
Sbjct: 1406 GPPGDPGRNGLPGFDGAGGRKGDP---------GLPGQPGTRGLDGPPGPDGLQGPPGP 1455
Score = 59.7 bits (143), Expect = 3e-08
Identities = 165/686 (24%), Positives = 217/686 (31%), Gaps = 141/686 (20%)
Query: 230 EGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAA 289
EG+P PG+ P G G G G G G G G G
Sbjct: 56 EGHPG-----LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMP 110
Query: 290 AAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAG 349
G G G G + G P G + GP G K GS G
Sbjct: 111 GHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSII--MSSLPG 168
Query: 350 QNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQ 409
+P P Q L P+ + G P PP PP P G
Sbjct: 169 PKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPP--GLMGPPGPPGLP------------GP 214
Query: 410 QAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQ 469
+ G+ G + Q P PG PG Q P+D K Q
Sbjct: 215 KGNMGLNFQGPKGEK---------GEQGLQGP---PGPPGQIS--EQKRPIDVEFQKGDQ 260
Query: 470 LYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQ 529
G+ + + P P G GPPGP PG G + +Q P + G+
Sbjct: 261 --GLPGD------RGPPGPPGIRGPPGP-----------PGGEKG-EKGEQGEPGKRGKP 300
Query: 530 GVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPG 589
G G + QP P LP Y P + P +D ++G + PP PG
Sbjct: 301 GKDGE---------NGQPGIPGLPGDPGY-PGE------PGRD-GEKGQKGDTGPPGPPG 343
Query: 590 K--PNHEDLNLIQQERPSSLPDLSGSIDDL-------PTGTEATLSSAVSAS-------G 633
P I ++ LP L G + P G +AV G
Sbjct: 344 LVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPG 403
Query: 634 STSSQGDQSNPAQSPFSPHASPHLSSIPGGPS-PSPVGSPVGSNQSRSGPISPASIPGSQ 692
+GD+ P S P P L PG P P P G P G + S I PG
Sbjct: 404 ERGQKGDEGPPGISIPGP---PGLDGQPGAPGLPGPPG-PAGPHIPPSDEICE---PG-- 454
Query: 693 MPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPH----PS 748
PP PPGS + + E+G + G + + G +GP P P
Sbjct: 455 -PPGPPGSPGDKG---------LQGEQG-VKGDKGDTCFNCIGTGISGPPGQPGLPGLPG 503
Query: 749 PGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISAN 808
P G + ++ + T GP+G P A G P S PG ++
Sbjct: 504 PPGSLGFPGQKGEKGQAGAT--------GPKGLPGIPGA-PGAPGFPGSKGEPGDILTFP 554
Query: 809 NQMHGQGPSQPCGAVPLGRMPSA----GMQNRPFP-GNMSSMT-------PSSPGM---- 852
+G GA L +P G+ P P G +T P +PG+
Sbjct: 555 GMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLP 614
Query: 853 ---SQQGGPGMGPPMPTVNRKAQEAA 875
G PG GPP P + Q A
Sbjct: 615 GNIGPMGPPGFGPPGPVGEKGIQGVA 640
Score = 47.4 bits (111), Expect = 2e-04
Identities = 72/267 (26%), Positives = 85/267 (31%), Gaps = 46/267 (17%)
Query: 79 NNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPA 138
+ L G G PGP E HG G PPGPP PG + P P
Sbjct: 1206 DGGLPGIPGNPGLPGPKGEPGFHG------FPGVQGPPGPP--GSPGPALEGPKGNPGPQ 1257
Query: 139 G--GRYEHPGLGALGTQQPPVAVPGGGG--------GPAAVPEFNNYYGSAAPAS-GGPG 187
G GR PG L + P +PG GG G +P G P G
Sbjct: 1258 GPPGR---PGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNP 1314
Query: 188 GRAGPCFDQHGGQQSPGMGMM--HSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSR 245
GR G +G + PG+ + +G PGS P EG P
Sbjct: 1315 GRPG----LNGMKGDPGLPGVPGFPGMKGPSGVPGSAGP-----EGEPGL-------IGP 1358
Query: 246 PGAGGGGGGGG------GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGG 299
PG G G G G G G G G G G G G G
Sbjct: 1359 PGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPG 1418
Query: 300 YGGSSAGYGVLSSPRQQGGGMMMGPGG 326
+ G+ G P Q G + GP G
Sbjct: 1419 FDGAGGRKGDPGLPGQPGTRGLDGPPG 1445
Score = 40.4 bits (93), Expect = 0.019
Identities = 69/295 (23%), Positives = 92/295 (31%), Gaps = 36/295 (12%)
Query: 620 GTEATLSSAVSASGSTSSQGDQSNPA-------QSPFSPHASPHLSSIPGGPSPSPVGSP 672
G++ S G G + +P + P P IPG P P + P
Sbjct: 35 GSKCDCSGIKGEKGERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGP 94
Query: 673 VGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGF--MAGTQRNPQ 730
G P +PG PG Q + + P GF + G P
Sbjct: 95 PGLPGFPGTP----GLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPG 150
Query: 731 MAQYGPQQTGPSMSPHPSP-GGQMHAGISSFQ-QSNSSGTYGPQMSQYGPQGNYSRPPAY 788
+ + MS P P G + G Q +G GP GP G PP
Sbjct: 151 IPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGP----IGPPG----PPGL 202
Query: 789 SGVPSASYSGPGPGM-GISANNQMHGQGPSQPCGAV----PLGRMPSAGMQNRPFPGNMS 843
G P GP PG+ G N ++ QGP G P G Q RP
Sbjct: 203 MGPP-----GP-PGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQ 256
Query: 844 SMTPSSPG-MSQQGGPGM-GPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGM 896
PG G PG+ GPP P K ++ + + PG+
Sbjct: 257 KGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGI 311
Score = 33.5 bits (75), Expect = 2.3
Identities = 87/354 (24%), Positives = 111/354 (31%), Gaps = 58/354 (16%)
Query: 1088 GEEPPPEVFSTGDTKKQPKLQ----PPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPT 1143
G+ P + T K QP L P P + GP P + G +PG+ P
Sbjct: 1101 GDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGP--PGNPG------LPGEPGPVG 1152
Query: 1144 PASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMP 1203
P P + G+ + P + P + P P G+S G +P
Sbjct: 1153 GGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGN--PGPPGLPGLSGQKGDGGLP 1210
Query: 1204 YEPNKDPFGGMRKVPGSSEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGAS 1263
P G + PG QG + P G G R F
Sbjct: 1211 GIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGF----- 1265
Query: 1264 YDRRHEPYGQQYPGQGPPSGQPPYGG--------HQPGLYPQQPNYKRHMDGMYGPPAKR 1315
Q PG P G P GG QPGL P P K G GPP
Sbjct: 1266 ---------QGLPGPEGPPGLPGNGGIKGEKGNPGQPGL-PGLPGLK----GDQGPPG-- 1309
Query: 1316 HEGDMYNMQYSSQQQEMYNQYG--GSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIP 1373
+Q + + + G G P ++G P S PG I G P
Sbjct: 1310 -------LQGNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPG-P 1361
Query: 1374 PQMMGGPLQSSSSEG----PQQNMWAARNDMPYPYQNRQGPGGPTQAPPYPGMN 1423
P + G QS +G P +P P Q QG GPT P PG N
Sbjct: 1362 PGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGP-QGPQGLPGPTGPPGDPGRN 1414
>gi|89363017 alpha 2 type V collagen preproprotein [Homo sapiens]
Length = 1499
Score = 95.9 bits (237), Expect = 4e-19
Identities = 218/867 (25%), Positives = 280/867 (32%), Gaps = 190/867 (21%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGR 141
L G GGA GP E G + G PPG KPG++ GEP GR
Sbjct: 226 LQGQQGGAGPTGPPGEPGDPGPMGPIGSRGPEGPPG-----KPGED-------GEP--GR 271
Query: 142 YEHPG-LGALGTQQPPVAVPGGGGGPAA--VPEFNNYYGS----------AAPASGGPGG 188
+PG +G G+ PG G P A +P + G AP S G G
Sbjct: 272 NGNPGEVGFAGS-------PGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAG 324
Query: 189 RAGPC--------------FDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPN 234
GP + G Q +PG H G PG M PL G P
Sbjct: 325 PTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAH----GMPGKPGPMGPL-----GIPG 375
Query: 235 SQCNHYPGYSRPGAGGGGG--GGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAA 292
S + +PG PG G G G G G G G G G G+ A A
Sbjct: 376 S--SGFPG--NPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAK 431
Query: 293 GGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQ 352
G G G G G SP QG GP G + GF+ AG
Sbjct: 432 GPTGSPGTSGPPGSAGPPGSPGPQGS---TGPQG-----IRGQPGDPGVPGFKGEAGPKG 483
Query: 353 HPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAA 412
P + P G P + PP P G++ A
Sbjct: 484 EPG------PHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPV--------------GERGA 523
Query: 413 AGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYG 472
G + G + P AQ P S G G SQG P P P G
Sbjct: 524 PG-----NRGFPGSDGLPGPKGAQGERGPVGSSGPKG-----SQGDPGRPGEPGLPGARG 573
Query: 473 MGSNPHSQPQQ------SSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQM--PP 524
+ NP Q + +P G GPPG IGI+G+ PG+M G+ P+ P
Sbjct: 574 LTGNPGVQGPEGKLGPLGAPGEDGRPGPPG----SIGIRGQ-PGSM-GLPGPKGSSGDPG 627
Query: 525 QYGQQGVSGYCQQGQQPYYSQQ--PQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRS 582
+ G+ G +G Q P + P P PP + + P +G
Sbjct: 628 KPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGL----AGERGEQGPPGPTGFQGLPGPP 683
Query: 583 QPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQS 642
PP GKP + +P G++ L E G T G++
Sbjct: 684 GPPGEGGKPGDQ-----------GVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKG 732
Query: 643 NP-AQSPFSPHASPHLSSIPG--GP--------------SPSPVGSPVG----SNQSRSG 681
P P SP S PG GP +P P G G + +G
Sbjct: 733 MAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAG 792
Query: 682 PISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMA--GTQRNP-QMAQYGPQQ 738
+PG PP P G E P RG + G++ NP + GP
Sbjct: 793 NDGARGLPGPLGPPGPAGPTGEKGE---------PGPRGLVGPPGSRGNPGSRGENGPTG 843
Query: 739 ----TGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQ--MSQYGPQGNYSRPPAYSG-- 790
GP P PG + G Q +G+ GPQ GP G P G
Sbjct: 844 AVGFAGP-QGPDGQPGVKGEPGEPG--QKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRG 900
Query: 791 --VPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRP-FPGNMSSMTP 847
P + PG + GP+ P G G+ G++ P G + P
Sbjct: 901 TQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEP--GKEGPPGLRGDPGSHGRVGDRGP 958
Query: 848 SSP--GMSQQGGPGM-------GPPMP 865
+ P G +G PG GPP P
Sbjct: 959 AGPPGGPGDKGDPGEDGQPGPDGPPGP 985
Score = 95.5 bits (236), Expect = 5e-19
Identities = 202/783 (25%), Positives = 245/783 (31%), Gaps = 163/783 (20%)
Query: 75 PISNNNSLGGAG--GGAPQPGPDMEQPQHGGAKDSAA-GGQADP--PGPP-------LLS 122
P+ + G G G PGP Q + G S G Q DP PG P L
Sbjct: 517 PVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTG 576
Query: 123 KPG---DEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVPG--GGGGPAAVPEFNNYYG 177
PG E P GR PG + Q + +PG G G P G
Sbjct: 577 NPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKP------G 630
Query: 178 SAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQC 237
A A G PG R P D G P + G PG +G P
Sbjct: 631 EAGNA-GVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGP-----TGFQGLPGP-- 682
Query: 238 NHYPGYSRPGAGGGGGGGG-----------GGGGGSGGGGGGGGAGAGGAGAGAVAAAAA 286
PG PG GG G G G G G G G G G A
Sbjct: 683 ---PG--PPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGH 737
Query: 287 AAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAG-GFQ 345
G G G G + G+ P ++G GP G K A G+A G +
Sbjct: 738 GPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGAR 797
Query: 346 RFAGQNQHPSGATPTLNQLLTSPS-----PMMRSYGGSYPEYSSPSAPP-PPPSQPQSQA 399
G P A PT + P P R GS E A P P Q
Sbjct: 798 GLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQP 857
Query: 400 AAAGAAAG-GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGR-SQG 457
G GQ+ AG G Q A SP P G PG GR +QG
Sbjct: 858 GVKGEPGEPGQKGDAG-----SPGPQGLAGSPG---------PHGPNGVPGLKGGRGTQG 903
Query: 458 SPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGP-----QRYPIGIQGRTPGAM 512
P G P S + P P G+ GP GP + P G++G PG+
Sbjct: 904 PP------------GATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRG-DPGSH 950
Query: 513 AGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQY--LPSQSQQRYQP- 569
+ PP G G G + QP P P Q +P Q +R P
Sbjct: 951 GRVGDRGPAGPP--GGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPG 1008
Query: 570 -------QQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTE 622
+ G PP G P P P G P G +
Sbjct: 1009 LPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNG--------PVGEPGPEG-----PAGND 1055
Query: 623 ATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQ----S 678
T G+ +GD+ +P P P PG +P PVG+P + Q
Sbjct: 1056 GT----PGRDGAVGERGDRGDPG-----PAGLPGSQGAPG--TPGPVGAPGDAGQRGDPG 1104
Query: 679 RSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQ 738
GPI P G + P P G + + H RGF G Q P GP
Sbjct: 1105 SRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGF-TGLQGLP-----GP-- 1156
Query: 739 TGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSG 798
P P G + S+G GP +GP+G PP G PS
Sbjct: 1157 --------PGPNG----------EQGSAGIPGP----FGPRG----PPGPVG-PSGKEGN 1189
Query: 799 PGP 801
PGP
Sbjct: 1190 PGP 1192
Score = 85.9 bits (211), Expect = 4e-16
Identities = 166/667 (24%), Positives = 209/667 (31%), Gaps = 141/667 (21%)
Query: 84 GAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLS-KPGDED-DAPPKMGEPAGGR 141
G G PG E+ + G + G PPGPP KPGD+ P P G R
Sbjct: 651 GPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPR 710
Query: 142 YEH--------PGLGALGTQQPPVAV-----PGGGGGPAAVPEFNNYYG-SAAPASGGPG 187
E PG+ L ++ P G GP+ P G P G
Sbjct: 711 GERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIA 770
Query: 188 GRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPL----QNSHEGYPNSQCNHYPGY 243
G GP D+ G + G + + A G PG + P +G P + G
Sbjct: 771 GTPGPKGDRGGIGEKGAEGT--AGNDGARGLPGPLGPPGPAGPTGEKGEPGPR-----GL 823
Query: 244 SRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGS 303
P G G G G +G G G G G AG G G GS
Sbjct: 824 VGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGS 883
Query: 304 SAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPS-----GAT 358
+G P +GG GP G A GF AG+ P G
Sbjct: 884 PGPHGPNGVPGLKGGRGTQGPPG--------------ATGFPGSAGRVGPPGPAGAPGPA 929
Query: 359 PTLNQLLTSPSPMMRSYGGSYPEYSS--PSAPPPPPS---------QPQSQAAAAGAAAG 407
L + P +R GS+ P+ PP P QP A
Sbjct: 930 GPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTT 989
Query: 408 GQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPM---- 463
GQ+ GM G + P PA +PG GPT P P+
Sbjct: 990 GQRGIVGMP-----GQRGERGMPGLPG------PAGTPGKVGPTGATGDKGPPGPVGPPG 1038
Query: 464 ---VMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGR--TPGAMAGMQYP 518
+ P G N + + + G G PGP P G QG TPG +
Sbjct: 1039 SNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLP-GSQGAPGTPGPVGA---- 1093
Query: 519 QQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEG- 577
P GQ+G G S+ P P + LP PQ +G
Sbjct: 1094 ----PGDAGQRGDPG----------SRGPIGPPGRAGKRGLPG-------PQGPRGDKGD 1132
Query: 578 YGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSS 637
+G R G+ H +Q LP G P G + GS
Sbjct: 1133 HGDRGDR----GQKGHRGFTGLQ-----GLPGPPG-----PNGEQ----------GSAGI 1168
Query: 638 QGDQSNPAQSPFSPHASPHL---SSIPGGPSP-SPVGSP-VGSNQSRSGPISPASIPGSQ 692
G PF P P S G P P P+G P V + +GP P PG
Sbjct: 1169 PG--------PFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPPGEPGPP 1220
Query: 693 MPPQPPG 699
PP PPG
Sbjct: 1221 GPPGPPG 1227
Score = 83.2 bits (204), Expect = 3e-15
Identities = 202/825 (24%), Positives = 265/825 (32%), Gaps = 154/825 (18%)
Query: 113 ADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAVP-----GGGGGPA 167
ADP PP + P + GG + G G G + P VP G GPA
Sbjct: 83 ADPVTPP--------GECCPVCSQTPGGGNTNFGRGRKGQKGEPGLVPVVTGIRGRPGPA 134
Query: 168 AVPEFNNYYGSAAP-ASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAA-----GAPGS 221
P GS P GP GR GP Q G PG+ A G G
Sbjct: 135 GPP------GSQGPRGERGPKGRPGPRGPQ-GIDGEPGVPGQPGAPGPPGHPSHPGPDGL 187
Query: 222 MDPLQNSHEGYPN-----SQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGA 276
P G SQ PG P G G G GG+G G G G G
Sbjct: 188 SRPFSAQMAGLDEKSGLGSQVGLMPGSVGPVGPRGPQGLQGQQGGAGPTGPPGEPGDPGP 247
Query: 277 GAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAA 336
+ G G G G+ G SP +G PG G L
Sbjct: 248 MGPIGSRGPEGPPGKPGEDGEPGRNGNPGEVGFAGSPGARG-----FPGAPGLPGLKGHR 302
Query: 337 AGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQ 396
G + G A PT PM P P P
Sbjct: 303 GHKGLEGPKGEVGAPGSKGEAGPT--------GPM------------GAMGPLGPRGMPG 342
Query: 397 SQAAAAGAAAGGQQAAAGM----GLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTM 452
+ A GQ+ A GM G +G ++ P + + P + G GP
Sbjct: 343 ERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQG 402
Query: 453 GRSQGSPMDPMVMK-RPQLYGMGSNPHSQPQQSSP---YPGGSYGP---PGPQ--RYPIG 503
R + P P+ P G P ++ SP P GS GP PGPQ P G
Sbjct: 403 QRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQG 462
Query: 504 IQGR--TPG--AMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQP----PHLP-- 553
I+G+ PG G P+ + P +G QG G G++ + P P P
Sbjct: 463 IRGQPGDPGVPGFKGEAGPKGE-PGPHGIQGPIG--PPGEEGKRGPRGDPGTVGPPGPVG 519
Query: 554 ----------PQAQYLPSQSQQRYQPQQDMSQEGYGTRSQP--PLAPGKPNHEDL--NLI 599
P + LP + + S G++ P P PG P L N
Sbjct: 520 ERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPG 579
Query: 600 QQERPSSLPDLSGSIDDLPTGTEATLS-----SAVSASGSTSSQGDQSNPAQSPFSPHAS 654
Q L L +D G ++ ++ G S GD P ++
Sbjct: 580 VQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEA--GNAGV 637
Query: 655 PHLSSIPG-----GPSPSPVGSP-VGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHP 708
P PG GPS PVG P + + GP P G PP PPG
Sbjct: 638 PGQRGAPGKDGEVGPS-GPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGE-------- 688
Query: 709 ALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGP--SMSPHPSPGGQMHAGISSFQ-QSNS 765
G + Q P GP +PG + GI+ +
Sbjct: 689 ---------------GGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGM 733
Query: 766 SGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHG-QGPSQPCGAV- 823
+G +GP GP+G+ P SG P +GP G+ + G GP G +
Sbjct: 734 AGGHGPD----GPKGS----PGPSGTPGD--TGPPGLQGMPGERGIAGTPGPKGDRGGIG 783
Query: 824 PLGRMPSAGMQN-RPFPGNMSSMTPSSPGMSQQGGPG----MGPP 863
G +AG R PG + P+ P ++G PG +GPP
Sbjct: 784 EKGAEGTAGNDGARGLPGPLGPPGPAGP-TGEKGEPGPRGLVGPP 827
Score = 63.5 bits (153), Expect = 2e-09
Identities = 150/617 (24%), Positives = 191/617 (30%), Gaps = 99/617 (16%)
Query: 82 LGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGR 141
L G G A GPD + G S G PPG L PG+ A G P G +
Sbjct: 727 LPGEKGMAGGHGPDGPK---GSPGPSGTPGDTGPPG--LQGMPGERGIA----GTP-GPK 776
Query: 142 YEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASG----GPGGRAGPCFDQH 197
+ G+G G + G G +P G A P GP G GP +
Sbjct: 777 GDRGGIGEKGAEGT-----AGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRG 831
Query: 198 G----GQQSPGMGMMHSASAAAAGAPGSM----DPLQNSHEGYPNSQCNHYPGYSRPGAG 249
G+ P + + G PG +P Q G P Q G
Sbjct: 832 NPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQ----------GLA 881
Query: 250 GGGGGGGGGG--GGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGY 307
G G G G G GG G G GA G A A A G G G G
Sbjct: 882 GSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPP 941
Query: 308 GVLSSPRQQGGGMMMGPGG--GGAASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLL 365
G+ P G GP G GG G P G T Q
Sbjct: 942 GLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPG--------PDGPPGPAGTTGQRG 993
Query: 366 TSPSPMMRSYGGSYPEYSSPSAPPP--PPSQPQSQAAAAGAAAGGQQAAAGM-GLGKDMG 422
P G E P P P P + A G G G + G
Sbjct: 994 IVGMP------GQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPG 1047
Query: 423 AQYAAASPAWAAAQQRSHPAMSPGTPGPT-MGRSQGSPMDPMVMKRPQLYGMGSNPHSQP 481
+ A + G PGP + SQG+P P + P G +P S+
Sbjct: 1048 PEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRG 1107
Query: 482 QQSSPYPGGSYGPPGPQRYPIGIQG-------------RTPGAMAGMQYPQQQMPPQYGQ 528
P G G PGPQ P G +G R + G+ P P G+
Sbjct: 1108 PIGPPGRAGKRGLPGPQG-PRGDKGDHGDRGDRGQKGHRGFTGLQGLPGP----PGPNGE 1162
Query: 529 QGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQP-----QQDMSQEGYGTRSQ 583
QG +G P+ + P P P + P P + EG
Sbjct: 1163 QGSAGI----PGPFGPRGPPGPVGPSGKEGNPGPLGPIGPPGVRGSVGEAGPEGPPGEPG 1218
Query: 584 PPLAPGKPNH------EDLNLIQQERPSSLPDLS---GSIDD---LPTGTEATLSSAVS- 630
PP PG P H + + + P LP+ + + DD G ATL S S
Sbjct: 1219 PPGPPGPPGHLTAALGDIMGHYDESMPDPLPEFTEDQAAPDDKNKTDPGVHATLKSLSSQ 1278
Query: 631 ASGSTSSQGDQSNPAQS 647
S G + +PA++
Sbjct: 1279 IETMRSPDGSKKHPART 1295
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 95.1 bits (235), Expect = 7e-19
Identities = 212/913 (23%), Positives = 311/913 (34%), Gaps = 140/913 (15%)
Query: 104 AKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQ-QPPVAVPGG 162
AK AA P LL+ PP PA R LGA G + P+A G
Sbjct: 8 AKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRV----LGAAGAVGRKPLAERAG 63
Query: 163 GGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSM 222
G G A +PE +AP RAGP +S G + AS A G
Sbjct: 64 GIGGATIPE-------SAP-------RAGPT-------RSAGTSSRNPASRPPASGRGER 102
Query: 223 DPLQNSHEGYPNSQCNHYPGYSRPGAGGGGG-----------GGGGGGGGSGGGGGGGGA 271
P + P S G +RPG G G G G
Sbjct: 103 APPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARR 162
Query: 272 GAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAAS 331
G G + A A + AAG G SA PR G S
Sbjct: 163 DTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA------RPRPPTEGPRKSVSSASEHS 216
Query: 332 LSKAAAG-----SAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPS 386
++ + SA GG QR A ++ S ATP + + PS ++P P
Sbjct: 217 TTEPSPAARRRPSAGGGLQRPASRSLS-SSATPLSSPARSGPSARGTPRAPAHPSQPKPK 275
Query: 387 A----PPPPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPA 442
PP + P+ AA A G +++ + A + A P A S
Sbjct: 276 GLQALRPPQVTPPRKDAAPAL----GPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLT 331
Query: 443 MSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGP------PG 496
TP P S +P P L + S P + P Q++ G P
Sbjct: 332 CQLATPLPLAPPSPSAP--------PSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPS 383
Query: 497 PQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQ-------- 548
P P+ P A + P Q PP S P + PQ
Sbjct: 384 PPLSPLATP--PPQAPPALALPPLQAPP-------SPPASPPLSPLATPSPQAPNALAVH 434
Query: 549 --------PPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLA--PGKPNHEDLNL 598
PP P QA + P S P + + + PPL P P ++
Sbjct: 435 LLQAPFSPPPSPPVQAPFSPPASPP-VSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSP 493
Query: 599 IQQERPSSLPDLSGSIDDL----PTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHAS 654
P + P L+ L P A + + A S + S P Q+PFSP AS
Sbjct: 494 SATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPA----SFPGQAPFSPSAS 549
Query: 655 PHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESS-SHPALSQS 713
+S + +P P PV + P SP + P Q P +PP ++S S P L+ +
Sbjct: 550 LPMSPL---ATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLA 606
Query: 714 PMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGP-- 771
P G R+P GP G S S +P + G S + ++ + P
Sbjct: 607 LAP---GPPPPPSRSPSSTLSGPDLAGHSSSATSTP--EELRGYDSGPEGGAAASPPPDA 661
Query: 772 QMSQYGPQGNYSRPP----AYSGVPSASY-----SGPGPGMGISANNQMHGQGPSQPC-G 821
+++ P +SR P A+ G P A +GPG G+ + G + P G
Sbjct: 662 ELAACHPAA-WSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPG 720
Query: 822 AVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQA 881
A+ G P + G + + SP ++ G +G +V + + ++ A
Sbjct: 721 ALDPGPSPGTS-GGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQHL--LSRTLLLA 777
Query: 882 AANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVG 941
AA A G PG + G + + ++L + + ++ + ++ S AS+
Sbjct: 778 AAEGAAGGSGGGPGGAEGGGVTGGA--------RAALSDAELGRWAELLSPLDESRASIT 829
Query: 942 LADMMSPGESKLP 954
SP + P
Sbjct: 830 SVTSFSPDDVASP 842
Score = 48.5 bits (114), Expect = 7e-05
Identities = 121/559 (21%), Positives = 183/559 (32%), Gaps = 65/559 (11%)
Query: 431 AWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGG 490
A A A R+ A +PG P R GSP P + L +G+ + + GG
Sbjct: 8 AKAGAAARTPAARAPGLLTP---RPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGG 64
Query: 491 SYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPP 550
G P+ P G T A + P + PP G+ + P + P P
Sbjct: 65 IGGATIPESAPRA--GPTRSAGTSSRNPASR-PPASGRG-------ERAPPAKNTSPGPV 114
Query: 551 HLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGK----PNHEDLNLIQQERPSS 606
P +A R P + Q+G ++ +A GK P L+ +
Sbjct: 115 SSPGRAS-----GTTRPGP---LGQKGLRISAEETVARGKATEAPKRSALSA------GA 160
Query: 607 LPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSP 666
D SG P+ A S A + P P S +S P
Sbjct: 161 RRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEP 220
Query: 667 SPVG-----SPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGF 721
SP + G + S +S ++ P S P ++ + PA P P+
Sbjct: 221 SPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRA-PAHPSQPKPKGLQA 279
Query: 722 MAGTQRNPQMAQ----YGPQQTGPSMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYG 777
+ Q P GP + P +P PS Q A + + S + Q++
Sbjct: 280 LRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAP-PTLPATPHSSSLTCQLATPL 338
Query: 778 PQG--NYSRPPAYSGVPSASYSGPGPG---MGISANNQMHGQGPSQPCG--AVPLGRMPS 830
P + S PP+ +PS + P +G H PS P A P + P
Sbjct: 339 PLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPP 398
Query: 831 A----GMQNRPFP---------GNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAA 877
A +Q P P S P++ + P PP P V A+
Sbjct: 399 ALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASP 458
Query: 878 VMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPAMVNSSA 937
+ +A P + L SP + P + S+ QAPP AP + +
Sbjct: 459 PVSPSATPPSQAP---PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKP 515
Query: 938 ASVGLADMMSPGESKLPLP 956
+ +P LP P
Sbjct: 516 PPQAPPALATPPLQALPSP 534
Score = 44.3 bits (103), Expect = 0.001
Identities = 54/187 (28%), Positives = 71/187 (37%), Gaps = 30/187 (16%)
Query: 1401 PYPYQNRQGPGGPTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQP 1460
P P Q P P +PP + T P Q P P MS SA+ P
Sbjct: 442 PPPSPPVQAPFSPPASPPV-SPSATPPSQAPPSLAAPPLQVPPSPPASPP-MSPSATPPP 499
Query: 1461 ITRPP---------QPSYQTPPSLPNHISRA-PSP-ASFQRSLENRMSPSKSPFLPSMKM 1509
PP +P Q PP+L +A PSP ASF P ++PF PS +
Sbjct: 500 QAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASF---------PGQAPFSPSASL 550
Query: 1510 QKVMPTVPTSQVTGPPPQPPPI-RREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRV 1568
P S + PPPQ PP+ + P S AS + RR T + R+
Sbjct: 551 -------PMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRL 603
Query: 1569 MMSLKSG 1575
++L G
Sbjct: 604 TLALAPG 610
Score = 43.1 bits (100), Expect = 0.003
Identities = 64/231 (27%), Positives = 78/231 (33%), Gaps = 63/231 (27%)
Query: 90 PQPGPDMEQPQHGGAKDSAAGGQADPP-----------GPPLLSKPGDEDDAPPKM---- 134
P PGPD G + + A PP GP L P ++
Sbjct: 590 PTPGPDTSV---SGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYD 646
Query: 135 GEPAGGRYE-----------HPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPAS 183
P GG HP + G PP+A G G P P PA+
Sbjct: 647 SGPEGGAAASPPPDAELAACHPAAWSRGPA-PPLAFRGAPGAPLPWP----------PAT 695
Query: 184 GGPGGRAGPC--FDQHGGQQ------------SPGMGMMHSASAAAAGAPGSMDPLQNSH 229
G PG G C ++ G + SPG +A+ A AGA S P Q
Sbjct: 696 G-PGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGA-SSRSPKQARL 753
Query: 230 EGYP-----NSQCNHYPGYSR--PGAGGGGGGGGGGGGGSGGGGGGGGAGA 273
P S H + A G GG GGG GG+ GGG GGA A
Sbjct: 754 GELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGAEGGGVTGGARA 804
Score = 39.7 bits (91), Expect = 0.033
Identities = 95/480 (19%), Positives = 149/480 (31%), Gaps = 62/480 (12%)
Query: 1108 QPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPT-PASTPHGQMTPMQGGRSSTISVH 1166
+PP P +L+ + G +AE G + T P S P T G S +
Sbjct: 34 RPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASR 93
Query: 1167 DPFSDVSDSSFPKRNSM---TPNAPYQQGMSMPDVMGRMPYEPNKDPF---GGMRKVPGS 1220
P S + + P +N+ + G + P +G+ + + G + P
Sbjct: 94 PPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKR 153
Query: 1221 SEPFMTQGQMPNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYPGQGP 1280
S ++ G ++S SP+ A + G P A R P +GP
Sbjct: 154 SA--LSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPT------EGP 205
Query: 1281 PSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDMYNMQYSSQQQEMYNQYGGSY 1340
H + G PA R ++ S+ + G S
Sbjct: 206 RKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASR------SLSSSATPLSSPARSGPSA 259
Query: 1341 SGPDRRPIQGQYPYPYSRERMQGP-------------GQIQTHGIPPQMMGGPLQSSSSE 1387
G R P P P + ++ P G + + + LQS +
Sbjct: 260 RGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPP 319
Query: 1388 G----PQQNMWAARNDMPYPYQNRQGPGGPT-----QAPPYPGMNRTDDMMVPDQRINHE 1438
P + + P P P+ P P T + P + H
Sbjct: 320 TLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHS 379
Query: 1439 ---SQWPSHVSQRQPYMSSSASMQPITRPPQP------------SYQTPPSLPNHISRAP 1483
S S ++ P + ++ P+ PP P S Q P +L H+ +AP
Sbjct: 380 FLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAP 439
Query: 1484 SPASFQRSLENRMSPSKS-PFLPSMKMQKVMP---TVPTSQVTGPPPQPPPIRREITFPP 1539
++ SP S P PS P P QV PP PP+ T PP
Sbjct: 440 FSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP 499
Score = 33.5 bits (75), Expect = 2.3
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 15/82 (18%)
Query: 1091 PPPEVFSTGDTKKQPKLQ-PPSPANSGSLQGPQTPQSTGSN--------SMAEVPGDLKP 1141
PPP+ P LQ PPSP S +LQ P+ P + G + ++A PG P
Sbjct: 558 PPPQA---PPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPG--PP 612
Query: 1142 PTPASTPHGQMT-PMQGGRSST 1162
P P+ +P ++ P G SS+
Sbjct: 613 PPPSRSPSSTLSGPDLAGHSSS 634
Score = 32.7 bits (73), Expect = 4.0
Identities = 46/230 (20%), Positives = 81/230 (35%), Gaps = 28/230 (12%)
Query: 1338 GSYSGPDRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAAR 1397
G + P + G P PG + G+ + ++E P+++ +A
Sbjct: 100 GERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAG 159
Query: 1398 NDMPYPYQNRQGPGGPTQAPPYPGMNRTD-----DMMVPDQRINHESQWPSHVSQRQPYM 1452
R+ GPT P P M R ++ +P + + P+ P
Sbjct: 160 A--------RRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTE----GPRK 207
Query: 1453 SSSASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKS----------P 1502
S S++ + T P P+ + PS + R P+ S S SP++S P
Sbjct: 208 SVSSASEHSTTEPSPAARRRPSAGGGLQR-PASRSLSSSATPLSSPARSGPSARGTPRAP 266
Query: 1503 FLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREITFPPGSVEASQPVLKQR 1552
PS K + + QVT P P ++ P + + L+ +
Sbjct: 267 AHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQ 316
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.129 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,877,838
Number of Sequences: 37866
Number of extensions: 7787533
Number of successful extensions: 158259
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 2252
Number of HSP's that attempted gapping in prelim test: 50802
Number of HSP's gapped (non-prelim): 51723
length of query: 2178
length of database: 18,247,518
effective HSP length: 118
effective length of query: 2060
effective length of database: 13,779,330
effective search space: 28385419800
effective search space used: 28385419800
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.