Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 39930399
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|39930399 tumor protein p53 inducible nuclear protein 2 [Homo
sapiens]
(220 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|39930399 tumor protein p53 inducible nuclear protein 2 [Homo ... 449 e-127
gi|15150807 tumor protein p53 inducible nuclear protein 1 isofor... 105 4e-23
gi|209180469 tumor protein p53 inducible nuclear protein 1 isofo... 67 1e-11
gi|239755705 PREDICTED: hypothetical protein [Homo sapiens] 48 7e-06
gi|239750217 PREDICTED: hypothetical protein [Homo sapiens] 47 1e-05
gi|239744524 PREDICTED: hypothetical protein XP_002343168 [Homo ... 47 1e-05
gi|38683860 insulin receptor substrate 2 [Homo sapiens] 44 1e-04
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 42 5e-04
gi|79750944 ubiquitin specific peptidase 42 [Homo sapiens] 41 7e-04
gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens] 41 0.001
gi|157785645 SPEG complex locus [Homo sapiens] 40 0.001
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 40 0.002
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 40 0.002
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 39 0.003
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 39 0.003
gi|56549694 enabled homolog isoform a [Homo sapiens] 39 0.003
gi|39930375 enabled homolog isoform b [Homo sapiens] 39 0.003
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 39 0.003
gi|171543895 ataxin 2 [Homo sapiens] 39 0.003
gi|55750053 atrophin-1 [Homo sapiens] 38 0.006
gi|55750041 atrophin-1 [Homo sapiens] 38 0.006
gi|22749337 THAP domain containing 8 [Homo sapiens] 38 0.006
gi|163965366 nascent polypeptide-associated complex alpha subuni... 38 0.006
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 38 0.008
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 38 0.008
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 38 0.008
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 38 0.008
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 37 0.010
gi|30039694 zinc finger protein 598 [Homo sapiens] 37 0.010
gi|148229134 ring finger and KH domain containing 2 [Homo sapiens] 37 0.010
>gi|39930399 tumor protein p53 inducible nuclear protein 2 [Homo
sapiens]
Length = 220
Score = 449 bits (1155), Expect = e-127
Identities = 220/220 (100%), Positives = 220/220 (100%)
Query: 1 MFQRLSSLFFSTPSPPEDPDCPRAFVSEEDEVDGWLIIDLPDSYAAPPSPGAAPAPAGRP 60
MFQRLSSLFFSTPSPPEDPDCPRAFVSEEDEVDGWLIIDLPDSYAAPPSPGAAPAPAGRP
Sbjct: 1 MFQRLSSLFFSTPSPPEDPDCPRAFVSEEDEVDGWLIIDLPDSYAAPPSPGAAPAPAGRP 60
Query: 61 PPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPG 120
PPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPG
Sbjct: 61 PPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPG 120
Query: 121 SPSPLPDAALPDGDLSEGELTPARREPRAARHAAPLPARAALLEKAGQVRRLQRARQRAE 180
SPSPLPDAALPDGDLSEGELTPARREPRAARHAAPLPARAALLEKAGQVRRLQRARQRAE
Sbjct: 121 SPSPLPDAALPDGDLSEGELTPARREPRAARHAAPLPARAALLEKAGQVRRLQRARQRAE 180
Query: 181 RHALSAKAVQRQNRARESRPRRSKNQSSFIYQPCQRQFNY 220
RHALSAKAVQRQNRARESRPRRSKNQSSFIYQPCQRQFNY
Sbjct: 181 RHALSAKAVQRQNRARESRPRRSKNQSSFIYQPCQRQFNY 220
>gi|15150807 tumor protein p53 inducible nuclear protein 1 isoform a
[Homo sapiens]
Length = 240
Score = 105 bits (261), Expect = 4e-23
Identities = 76/253 (30%), Positives = 116/253 (45%), Gaps = 46/253 (18%)
Query: 1 MFQRLSSLFFSTPSPPEDPDCPRAFVSEEDEVDGWLIIDLPDS---YAAPPSPGAAPAPA 57
MFQRL+ +F S + + P E+DE W+++D D+ ++A
Sbjct: 1 MFQRLNKMFVGEVSSSSNQE-PEFNEKEDDE---WILVDFIDTCTGFSAEEEEEEEDISE 56
Query: 58 GRPPPAPSL--------------------------MDESWFVTPPACFTAEGPGLGPARL 91
P PS+ M+ESWF+TPP CFTA G L ++
Sbjct: 57 ESPTEHPSVFSCLPASLECLADTSDSCFLQFESCPMEESWFITPPPCFTAGG--LTTIKV 114
Query: 92 QSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEGELTPARREPRAAR 151
++SP+E+LLIEHPSMSVY ++ PG L +A +L + +
Sbjct: 115 ETSPMENLLIEHPSMSVYAVHNSC---PG----LSEATRGTDELHSPSSPRVEAQNEMGQ 167
Query: 152 H----AAPLPARAALLEKAGQVRRLQRARQRAERHALSAKAVQRQNRARESRPRRSKNQS 207
H A L A LE+ R Q ++ +ER L+ +++RQN R+ PR+ K+
Sbjct: 168 HIHCYVAALAAHTTFLEQPKSFRPSQWIKEHSERQPLNRNSLRRQNLTRDCHPRQVKHNG 227
Query: 208 SFIYQPCQRQFNY 220
++QPC RQ+NY
Sbjct: 228 WVVHQPCPRQYNY 240
>gi|209180469 tumor protein p53 inducible nuclear protein 1 isoform
b [Homo sapiens]
Length = 164
Score = 67.0 bits (162), Expect = 1e-11
Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 35/138 (25%)
Query: 1 MFQRLSSLFFSTPSPPEDPDCPRAFVSEEDEVDGWLIIDLPDS---YAAPPSPGAAPAPA 57
MFQRL+ +F S + + P E+DE W+++D D+ ++A
Sbjct: 1 MFQRLNKMFVGEVSSSSNQE-PEFNEKEDDE---WILVDFIDTCTGFSAEEEEEEEDISE 56
Query: 58 GRPPPAPSL--------------------------MDESWFVTPPACFTAEGPGLGPARL 91
P PS+ M+ESWF+TPP CFTA G L ++
Sbjct: 57 ESPTEHPSVFSCLPASLECLADTSDSCFLQFESCPMEESWFITPPPCFTAGG--LTTIKV 114
Query: 92 QSSPLEDLLIEHPSMSVY 109
++SP+E+LLIEHPSMSVY
Sbjct: 115 ETSPMENLLIEHPSMSVY 132
>gi|239755705 PREDICTED: hypothetical protein [Homo sapiens]
Length = 306
Score = 47.8 bits (112), Expect = 7e-06
Identities = 44/149 (29%), Positives = 57/149 (38%), Gaps = 35/149 (23%)
Query: 37 IIDLPDSYAAPPSPGAAPAPAGRPPPAPS-------LMDESWFVTPPACFTAEGP---GL 86
++ P + PPS G P P+ RPPP+P L DE+ A + P G
Sbjct: 67 VLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTGE 126
Query: 87 GPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEG-ELTPARR 145
GPAR ST L P +P G E PARR
Sbjct: 127 GPAR---------------------PSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARR 165
Query: 146 EPRAARHAAPLPARAALLEKAGQVRRLQR 174
P A PLP+RA L G+ RR+++
Sbjct: 166 RPAPAPPLLPLPSRALWL---GEWRRVEK 191
>gi|239750217 PREDICTED: hypothetical protein [Homo sapiens]
Length = 363
Score = 47.4 bits (111), Expect = 1e-05
Identities = 50/167 (29%), Positives = 61/167 (36%), Gaps = 40/167 (23%)
Query: 37 IIDLPDSYAAPPSPGAAPAPAGRPPPAPS-------LMDESWFVTPPACFTAEGP---GL 86
++ P + PPS G P P+ RPPP+P L DE+ A + P G
Sbjct: 67 VLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTGE 126
Query: 87 GPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEG-ELTPARR 145
GPAR ST L P +P G E PARR
Sbjct: 127 GPAR---------------------PSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARR 165
Query: 146 EPRAARHAAPLPARAALLEKAGQVRRLQRARQRAERHALSAKAVQRQ 192
P A PLP+RA L G+ RR + R E K QRQ
Sbjct: 166 RPAPAPPLLPLPSRALWL---GEWRRGRLGTSRPE-----FKCYQRQ 204
>gi|239744524 PREDICTED: hypothetical protein XP_002343168 [Homo
sapiens]
Length = 363
Score = 47.4 bits (111), Expect = 1e-05
Identities = 50/167 (29%), Positives = 61/167 (36%), Gaps = 40/167 (23%)
Query: 37 IIDLPDSYAAPPSPGAAPAPAGRPPPAPS-------LMDESWFVTPPACFTAEGP---GL 86
++ P + PPS G P P+ RPPP+P L DE+ A + P G
Sbjct: 67 VLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTGE 126
Query: 87 GPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEG-ELTPARR 145
GPAR ST L P +P G E PARR
Sbjct: 127 GPAR---------------------PSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARR 165
Query: 146 EPRAARHAAPLPARAALLEKAGQVRRLQRARQRAERHALSAKAVQRQ 192
P A PLP+RA L G+ RR + R E K QRQ
Sbjct: 166 RPAPAPPLLPLPSRALWL---GEWRRGRLGTSRPE-----FKCYQRQ 204
>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
Length = 1338
Score = 43.5 bits (101), Expect = 1e-04
Identities = 58/206 (28%), Positives = 83/206 (40%), Gaps = 36/206 (17%)
Query: 7 SLFFSTPSPPEDPDCPRAFVSEEDEVDGWLIIDLPDSYAA-PPSPGAAPAPAGRPPPAPS 65
+L FS+P P+ P P +DG L + Y PP P A+P+ + +PPP P
Sbjct: 980 NLDFSSPKSPK-PGAPSGH--PVGSLDGLLSPEASSPYPPLPPRPSASPSSSLQPPPPPP 1036
Query: 66 LMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPSPL 125
E + + PPA A G G A SS D ++ M+ V + P
Sbjct: 1037 APGELYRL-PPASAVATAQGPGAASSLSSDTGD-NGDYTEMAFGVAAT---------PPQ 1085
Query: 126 PDAALPDGDLSEGELTPARREPRAARHAAPLPA--RAALLEKAGQVRRLQRARQRAERHA 183
P AA P +P AAR A+P R +L+E+ V +A Q + H
Sbjct: 1086 PIAAPP--------------KPEAARVASPTSGVKRLSLMEQVSGVEAFLQASQPPDPHR 1131
Query: 184 LSAKAVQRQNRARESRPRRSKNQSSF 209
AK + RA RR + +F
Sbjct: 1132 -GAKVI----RADPQGGRRRHSSETF 1152
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 41.6 bits (96), Expect = 5e-04
Identities = 56/214 (26%), Positives = 75/214 (35%), Gaps = 47/214 (21%)
Query: 13 PSPPEDPDCPRAFVSEEDEVDGWLIIDLPDSY-------AAPPSPGAAPAPAGRPPPAP- 64
P PPED RA ++ P + AAP PG P PA PPP P
Sbjct: 730 PHPPEDDSSLRAERGSLADLPMAPPASAPPEFLDPLMGAAAPQYPGRGPPPAPPPPPPPP 789
Query: 65 -SLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPS 123
+ D + PP+ + G GL SSP P S Y T +
Sbjct: 790 RAPADPAASPDPPSAVASPGSGL------SSP-----GPKPGDSGYETETPF-------- 830
Query: 124 PLPDAALPDGDLSEGELTPARR---------EPRAARHAAPLP-----ARAALLEKAGQV 169
P+ A P G +E E P R PR PLP + + +
Sbjct: 831 -SPEGAFPGGGAAEEEGVPRPRAPPEPPDPGAPRPPPDPGPLPLPGPREKPTFVVQVSTE 889
Query: 170 RRLQRARQRAERHALSAKAVQRQNRARESRPRRS 203
+ L R+ R+ L K ARE+ PR++
Sbjct: 890 QLLMSLREDVTRNLLGEKGA----TARETGPRKA 919
>gi|79750944 ubiquitin specific peptidase 42 [Homo sapiens]
Length = 1316
Score = 41.2 bits (95), Expect = 7e-04
Identities = 59/219 (26%), Positives = 81/219 (36%), Gaps = 38/219 (17%)
Query: 15 PPEDPDCPRAFVSEEDEVDGWLIIDLPDSYAAPPSPGAAPAPAGRPP----PAPSLMDES 70
PP DP P ++E + + P+ PPS G PP P D S
Sbjct: 777 PPRDPGTP---ATKEGAWEAMAVA--PEE--PPPSAGEDIVGDTAPPDLCDPGSLTGDAS 829
Query: 71 WFVTPPACFTAEGP----------GLGPARLQSS--PLEDLLIEHPSMSVYVTGSTIVLE 118
AEGP GL PA S P E L+ HPS
Sbjct: 830 PLSQDAKGMIAEGPRDSALAEAPEGLSPAPPARSEEPCEQPLLVHPSGDHARDAQDPSQS 889
Query: 119 PGSPS-----PLP-----DAALPDGDLSEGELTPARREPRAARHAAPLPARAALLEKAGQ 168
G+P P P A P+GD E +P R AA AP P+ A EK G
Sbjct: 890 LGAPEAAERPPAPVLDMAPAGHPEGD---AEPSPGERVEDAAAPKAPGPSPAK--EKIGS 944
Query: 169 VRRLQRARQRAERHALSAKAVQRQNRARESRPRRSKNQS 207
+R++ R R+ R S+ R++R++ R + ++
Sbjct: 945 LRKVDRGHYRSRRERSSSGEPARESRSKTEGHRHRRRRT 983
>gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]
Length = 1352
Score = 40.8 bits (94), Expect = 0.001
Identities = 31/104 (29%), Positives = 39/104 (37%), Gaps = 26/104 (25%)
Query: 47 PPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGPAR-----------LQSSP 95
PP P AAP P PPP S PPAC PG+ R LQ
Sbjct: 95 PPGPAAAPTPPPCPPPPAS-------PAPPACAAEPVPGVAGLRNHGNTCFMNATLQCLS 147
Query: 96 LEDLLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEGE 139
+L E+ ++ Y G P P PD P G ++G+
Sbjct: 148 NTELFAEYLALGQY--------RAGRPEPSPDPEQPAGRGAQGQ 183
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 40.4 bits (93), Expect = 0.001
Identities = 56/224 (25%), Positives = 79/224 (35%), Gaps = 30/224 (13%)
Query: 5 LSSLFFSTPSPPEDPDCPRAFVSEEDEVDGWLIIDLPDSYAAPPSPGAAPAPAGRP---- 60
LS+L + PS P P P+ + E D P A P+ AP P P
Sbjct: 2167 LSALSEAQPSSPARPSAPKPSTPKSAEPSATTPSDAPQPPAPQPAQDKAPEPRPEPVRAS 2226
Query: 61 ---PPAPSLMDESWFVTPPACFT--------AEGPGLGPARLQSSPLEDLLIEHPSMSVY 109
PP +L + +TP A A+GP GPA S P P +V+
Sbjct: 2227 KPAPPPQALQTLALPLTPYAQIIQSLQLSGHAQGPSQGPAAPPSEP-------KPHAAVF 2279
Query: 110 VTGSTIVLEPGSPSPLPDAALPDGDLSEGELTPARREPRAARHAAPLPARAALLEKAGQV 169
V P P P+ +P AR R + L + LE V
Sbjct: 2280 AR----VASP--PPGAPEKRVPSAGGPPVLAEKARVPTVPPRPGSSLSSSIENLESEA-V 2332
Query: 170 RRLQRARQRAERHALSAKAVQRQNRARESRPRRSKNQSSFIYQP 213
+ R R +L + + R +R+ E P R + IY+P
Sbjct: 2333 FEAKFKRSRESPLSLGLRLLSR-SRSEERGPFRGAEEEDGIYRP 2375
Score = 30.0 bits (66), Expect = 1.6
Identities = 46/185 (24%), Positives = 67/185 (36%), Gaps = 25/185 (13%)
Query: 46 APPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLI--EH 103
+P PG P + P S PP+ +AE PG P R +S E
Sbjct: 526 SPREPGEPPLFSRPSTPKTSRAVSPAAAQPPSPSSAEKPGDEPGRPRSRGPAGRTEPGEG 585
Query: 104 PSMSVY------VTGSTIVLEPGSPSPLPDAALPDGDLSEGELTPARREPRAARHAAPLP 157
P V +T S + E SP P P A P+ + + P R+ A+ LP
Sbjct: 586 PQQEVRRRDQFPLTRSRAIQECRSPVPPPAADPPE---ARTKAPPGRKREPPAQAVRFLP 642
Query: 158 ARAALLEKAGQVRRLQ--RARQRAERH------------ALSAKAVQRQNRARESRPRRS 203
LE A + L+ RA AE+ + + Q + R +RP
Sbjct: 643 WATPGLEGAAVPQTLEKNRAGPEAEKRLRRGPEEDGPWGPWDRRGARSQGKGRRARPTSP 702
Query: 204 KNQSS 208
+ +SS
Sbjct: 703 ELESS 707
Score = 28.5 bits (62), Expect = 4.7
Identities = 38/136 (27%), Positives = 49/136 (36%), Gaps = 29/136 (21%)
Query: 11 STPSPPEDPDCPRAFVSEEDEVDGWLIIDLPDSYAAPPSPGAAPAPAGRP-PPAPSLMDE 69
S P+ PD P + P + AAP P +P+ P PP+ +L
Sbjct: 2789 SRPARARPPDSPTSLAP-------------PLAPAAPTPPSVTVSPSSPPTPPSQALSSL 2835
Query: 70 SWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSMSVYVTGS---TIVLEPGSPSPLP 126
PP GL AR P E L S +VT S VL+ G+P P
Sbjct: 2836 KAVGPPPQTPPRRHRGLQAAR----PAEPTL-----PSTHVTPSEPKPFVLDTGTPIP-- 2884
Query: 127 DAALPDGDLSEGELTP 142
A+ P G TP
Sbjct: 2885 -ASTPQGVKPVSSSTP 2899
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 39.7 bits (91), Expect = 0.002
Identities = 56/197 (28%), Positives = 77/197 (39%), Gaps = 35/197 (17%)
Query: 49 SPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSMSV 108
SPGA PAP PPP P+ + PP A PG GPA Q P + L +
Sbjct: 13 SPGATPAPGPPPPPPPAPPQQQ---PPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEG 69
Query: 109 YVTG-----STIVLEPGSPSPLPDA-ALPDGDLSEGE--LTPA-----RREPR---AARH 152
G + PG+P A P+G+ GE +PA R P+ + R
Sbjct: 70 GPRGRLRSRDSSCGRPGTPGAASTAKGSPNGECGRGEPQCSPAGPEGPARGPKVSFSCRG 129
Query: 153 AA------PLPARAALLEK---AGQVRRLQRARQRAERHALSAKAVQR-------QNRAR 196
AA P PA A E+ AG+ R Q + + + AL V + +A
Sbjct: 130 AASGPAPGPGPAEEAGSEEAGPAGEPRGSQASFMQRQFGALLQPGVNKFSLRMFGSQKAV 189
Query: 197 ESRPRRSKNQSSFIYQP 213
E R K+ ++I P
Sbjct: 190 EREQERVKSAGAWIIHP 206
Score = 33.1 bits (74), Expect = 0.19
Identities = 39/121 (32%), Positives = 41/121 (33%), Gaps = 27/121 (22%)
Query: 47 PPSPGAAPAPAGRPPPA--------PSLMDESWFVTPPACFTAEGPGLGPARLQSSPLED 98
PP P A A G PPPA P S + PA A GP L PAR S
Sbjct: 762 PPGPAPAAASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLA-GPAL-PARRLSRASRP 819
Query: 99 LLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEGELTPARREPRAARHAAPLPA 158
L PS+ G P S S TP AAR AAP P
Sbjct: 820 LSASQPSLPHGAPGPAASTRPASSS-----------------TPRLGPTPAARAAAPSPD 862
Query: 159 R 159
R
Sbjct: 863 R 863
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 39.7 bits (91), Expect = 0.002
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Query: 46 APPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSP------LEDL 99
APP+P P+ + PP D S +TP + T+E P +P DL
Sbjct: 1003 APPTPSPGPSASPGPPGPALTSDSSRELTPHSALTSEATSDAPDTSPPTPDPASRTNPDL 1062
Query: 100 LIEHPSMSVYVTGSTIV--LEPGSPSPLPDAALPDGDLSEGELTPA 143
++ P ++ S++V L P PSP P LP +L+ TP+
Sbjct: 1063 ILTSPDFALSTPDSSVVPALTP-EPSPTPLPTLPK-ELTSDPSTPS 1106
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 39.3 bits (90), Expect = 0.003
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 40 LPDSYAAPPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGP 88
LP S PP P P AG PPP P L E+ PP GPG+ P
Sbjct: 672 LPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPG-GPGIPP 719
Score = 36.6 bits (83), Expect = 0.017
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 40 LPDSYAAPPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGP 88
LP S PP P P AG PPP P L + PP F GPG+ P
Sbjct: 685 LPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPG-IPPPPPFPG-GPGIPP 731
Score = 28.9 bits (63), Expect = 3.6
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 12/91 (13%)
Query: 47 PPSPGAA---PAPAGRPPPAPSLMDESWFVTPPA-----CFTAEGPGLGPARLQSSPLED 98
PP+PG + P P PPP P L +PP+ + P G A + P
Sbjct: 590 PPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLP 649
Query: 99 LLIEHPSMSVYVTGSTIVLEPGSPSPLPDAA 129
+ PS S G+ I P PLP +A
Sbjct: 650 EGVGIPSPSSLPGGTAI----PPPPPLPGSA 676
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 39.3 bits (90), Expect = 0.003
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 40 LPDSYAAPPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGP 88
LP S PP P P AG PPP P L E+ PP GPG+ P
Sbjct: 681 LPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPG-GPGIPP 728
Score = 36.6 bits (83), Expect = 0.017
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 40 LPDSYAAPPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGP 88
LP S PP P P AG PPP P L + PP F GPG+ P
Sbjct: 694 LPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPG-IPPPPPFPG-GPGIPP 740
Score = 28.9 bits (63), Expect = 3.6
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 12/91 (13%)
Query: 47 PPSPGAA---PAPAGRPPPAPSLMDESWFVTPPA-----CFTAEGPGLGPARLQSSPLED 98
PP+PG + P P PPP P L +PP+ + P G A + P
Sbjct: 599 PPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLP 658
Query: 99 LLIEHPSMSVYVTGSTIVLEPGSPSPLPDAA 129
+ PS S G+ I P PLP +A
Sbjct: 659 EGVGIPSPSSLPGGTAI----PPPPPLPGSA 685
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 38.9 bits (89), Expect = 0.003
Identities = 48/205 (23%), Positives = 81/205 (39%), Gaps = 25/205 (12%)
Query: 13 PSPPEDPDCPRAFVSEEDEVDGWLIIDLPDSYAAPPSPGAAPAPAGRPPPAPSLMDESWF 72
P PP P +A V+ + P PP P P P PPP P+ +
Sbjct: 315 PPPPLPPGPAQASVA---------LPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPP 365
Query: 73 VTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPD 132
P A G L + PL L + + G+ + S + D + P
Sbjct: 366 PPPAPPLPASGFFLASMSEDNRPLTGL-------AAAIAGAKL----RKVSRMEDTSFPS 414
Query: 133 GDLSEGELTPARREPRAARHAAPLP-ARAALLEKAGQVRRLQRARQRAERHALSAKAVQR 191
G + G + A + R PLP + L+E+ + L R R+ AE+ + + + Q+
Sbjct: 415 GGNAIG-VNSASSKTDTGRGNGPLPLGGSGLMEEMSAL--LARRRRIAEKGS-TIETEQK 470
Query: 192 QNRARESRPRRSKNQSSFIYQPCQR 216
+++ +S P SK S+ +P ++
Sbjct: 471 EDKGEDSEPVTSKASSTSTPEPTRK 495
Score = 28.1 bits (61), Expect = 6.1
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 111 TGSTIVLEPGSPSPLPDAALPDGDLSEGELTPARREPRAARHAAPLPARAALLEKAGQVR 170
TG T+ P S LP A + +G S+ EL RR+ + + L R L + +
Sbjct: 116 TGPTL---PRQNSQLP-AQVQNGP-SQEELEIQRRQLQEQQRQKELE-RERLERERMERE 169
Query: 171 RLQRAR---QRAERHALSAKAVQRQNRARESRPRRSKNQSSFIYQPCQRQ 217
RL+R R +R ER L + ++R+ + RE + R + + + +RQ
Sbjct: 170 RLERERLERERLERERLEQEQLERERQERERQERLERQERLERQERLERQ 219
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 38.9 bits (89), Expect = 0.003
Identities = 48/205 (23%), Positives = 81/205 (39%), Gaps = 25/205 (12%)
Query: 13 PSPPEDPDCPRAFVSEEDEVDGWLIIDLPDSYAAPPSPGAAPAPAGRPPPAPSLMDESWF 72
P PP P +A V+ + P PP P P P PPP P+ +
Sbjct: 315 PPPPLPPGPAQASVA---------LPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPP 365
Query: 73 VTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPD 132
P A G L + PL L + + G+ + S + D + P
Sbjct: 366 PPPAPPLPASGFFLASMSEDNRPLTGL-------AAAIAGAKL----RKVSRMEDTSFPS 414
Query: 133 GDLSEGELTPARREPRAARHAAPLP-ARAALLEKAGQVRRLQRARQRAERHALSAKAVQR 191
G + G + A + R PLP + L+E+ + L R R+ AE+ + + + Q+
Sbjct: 415 GGNAIG-VNSASSKTDTGRGNGPLPLGGSGLMEEMSAL--LARRRRIAEKGS-TIETEQK 470
Query: 192 QNRARESRPRRSKNQSSFIYQPCQR 216
+++ +S P SK S+ +P ++
Sbjct: 471 EDKGEDSEPVTSKASSTSTPEPTRK 495
Score = 28.1 bits (61), Expect = 6.1
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 111 TGSTIVLEPGSPSPLPDAALPDGDLSEGELTPARREPRAARHAAPLPARAALLEKAGQVR 170
TG T+ P S LP A + +G S+ EL RR+ + + L R L + +
Sbjct: 116 TGPTL---PRQNSQLP-AQVQNGP-SQEELEIQRRQLQEQQRQKELE-RERLERERMERE 169
Query: 171 RLQRAR---QRAERHALSAKAVQRQNRARESRPRRSKNQSSFIYQPCQRQ 217
RL+R R +R ER L + ++R+ + RE + R + + + +RQ
Sbjct: 170 RLERERLERERLERERLEQEQLERERQERERQERLERQERLERQERLERQ 219
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 38.9 bits (89), Expect = 0.003
Identities = 40/145 (27%), Positives = 54/145 (37%), Gaps = 21/145 (14%)
Query: 45 AAPPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHP 104
A PP P AP A PPP PS + PP P P+ S P P
Sbjct: 309 APPPPPSRAPT-AAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGP------PPP 361
Query: 105 SMSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEGELTPARREPRAARHAAPLPA--RAAL 162
SV G P P P P P G S+G+ H P A +AAL
Sbjct: 362 PPSVLGVGPVAPPPPPPPPPPPGPPPPPGLPSDGD------------HQVPTTAGNKAAL 409
Query: 163 LEKAGQVRRLQRARQRAERHALSAK 187
L++ + +L++ Q + + S +
Sbjct: 410 LDQIREGAQLKKVEQNSRPVSCSGR 434
Score = 33.1 bits (74), Expect = 0.19
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 41 PDSYAAPPSPGAAP--APAGRPPPAPSLMDESWFVTPPACFTAEGPGLGP 88
P + PP P A P AP+G PPP PS++ PP PG P
Sbjct: 338 PPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPP 387
Score = 28.1 bits (61), Expect = 6.1
Identities = 24/97 (24%), Positives = 33/97 (34%), Gaps = 13/97 (13%)
Query: 46 APPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFT--------AEGPGLGPARLQSSPL- 96
APP P P P G PPP P L + P EG L S P+
Sbjct: 372 APPPPPPPPPPPG-PPPPPGLPSDGDHQVPTTAGNKAALLDQIREGAQLKKVEQNSRPVS 430
Query: 97 ---EDLLIEHPSMSVYVTGSTIVLEPGSPSPLPDAAL 130
D L++ + + E P+P P + +
Sbjct: 431 CSGRDALLDQIRQGIQLKSVADGQESTPPTPAPTSGI 467
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 38.9 bits (89), Expect = 0.003
Identities = 47/177 (26%), Positives = 67/177 (37%), Gaps = 13/177 (7%)
Query: 34 GWLIIDLPDSYAAPPSPGAAPAP---AGRPPPAPSLMDESWFVTPPA--CFTAEGPGLGP 88
GW + P + GAAP P A PPP P P A CF + G G G
Sbjct: 27 GWRSLQRPARRSGRGGGGAAPGPYPSAAPPPPGPGPPPSRQSSPPSASDCFGSNGNGGGA 86
Query: 89 ARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEGELTPARREPR 148
R S L L + P +V + PG+P P A P G +P R
Sbjct: 87 FRPGSRRL--LGLGGPPRP-FVVLLLPLASPGAPPAAPTRASPLG----ARASPPRSGVS 139
Query: 149 AARHAAPLPARAALLEKAGQVRRLQRARQRAERHALSAKAVQRQNRARESRPRRSKN 205
AR A P R A G + + +Q+ ++ + Q+Q + ++ P + N
Sbjct: 140 LARPAPGCP-RPACEPVYGPLTMSLKPQQQQQQQQQQQQQQQQQQQQQQQPPPAAAN 195
Score = 33.5 bits (75), Expect = 0.15
Identities = 31/105 (29%), Positives = 40/105 (38%), Gaps = 25/105 (23%)
Query: 48 PSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSMS 107
P P P+P+ RPP S + P A P P+R P HPS
Sbjct: 551 PWPSPCPSPSSRPPSRYQSGPNS--LPPRAATPTRPPSRPPSRPSRPP------SHPSAH 602
Query: 108 VYVTGSTIVLEPGSPSPLPDAALPDGDLSEGELTPARREPRAARH 152
GSP+P+ + +P SEG P R P+A RH
Sbjct: 603 ------------GSPAPV--STMPKRMSSEG---PPRMSPKAQRH 630
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 38.1 bits (87), Expect = 0.006
Identities = 39/166 (23%), Positives = 61/166 (36%), Gaps = 24/166 (14%)
Query: 47 PPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSM 106
P SP P P PP PS + + PP A GP L +++ P E+
Sbjct: 687 PGSPTVGPGPL--PPAGPSGLPS---LPPPPAAPASGPPLSATQIKQEPAEE-------- 733
Query: 107 SVYVTGSTIVLEPGSPSPLPDAALPDGDLSEGELTPARRE------PRAARHAAPLPARA 160
Y T + V SPSP P S+ + R+ + PL
Sbjct: 734 --YETPESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCARSDLYFVPLEGSK 791
Query: 161 ALLEKAGQVRRLQRARQRAERHALSAKAVQRQNRARESRPRRSKNQ 206
++A V ++ R+ AE+ A K +R+ + R R + +
Sbjct: 792 LAKKRADLV---EKVRREAEQRAREEKEREREREREKEREREKERE 834
Score = 30.0 bits (66), Expect = 1.6
Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 11/63 (17%)
Query: 8 LFFSTPSPPED-PDCPRAFVSEEDEVDGWLIIDLPDSYAAPPSPGAA---PAPAGRPPPA 63
LF +P PP+ P P A V P Y AP P + AP G PPP
Sbjct: 164 LFPPSPQPPDSTPRQPEASFEPHPSVT-------PTGYHAPMEPPTSRMFQAPPGAPPPH 216
Query: 64 PSL 66
P L
Sbjct: 217 PQL 219
Score = 30.0 bits (66), Expect = 1.6
Identities = 34/124 (27%), Positives = 43/124 (34%), Gaps = 29/124 (23%)
Query: 40 LPDSYAAPPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDL 99
L ++ A+PP GA P P P+P M + PP GP GP L SP
Sbjct: 310 LNNASASPPGLGAQPLPGHL--PSPHAMGQGMGGLPP------GPEKGPT-LAPSPHS-- 358
Query: 100 LIEHPSMSVYVTGSTIVLEPGSPS-PLPDAALPDGDLSEGELTPARREPRAARHAAPLPA 158
L P S S P P P S + ++ A+P PA
Sbjct: 359 -----------------LPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPA 401
Query: 159 RAAL 162
AL
Sbjct: 402 SQAL 405
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 38.1 bits (87), Expect = 0.006
Identities = 39/166 (23%), Positives = 61/166 (36%), Gaps = 24/166 (14%)
Query: 47 PPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSM 106
P SP P P PP PS + + PP A GP L +++ P E+
Sbjct: 687 PGSPTVGPGPL--PPAGPSGLPS---LPPPPAAPASGPPLSATQIKQEPAEE-------- 733
Query: 107 SVYVTGSTIVLEPGSPSPLPDAALPDGDLSEGELTPARRE------PRAARHAAPLPARA 160
Y T + V SPSP P S+ + R+ + PL
Sbjct: 734 --YETPESPVPPARSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCARSDLYFVPLEGSK 791
Query: 161 ALLEKAGQVRRLQRARQRAERHALSAKAVQRQNRARESRPRRSKNQ 206
++A V ++ R+ AE+ A K +R+ + R R + +
Sbjct: 792 LAKKRADLV---EKVRREAEQRAREEKEREREREREKEREREKERE 834
Score = 30.0 bits (66), Expect = 1.6
Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 11/63 (17%)
Query: 8 LFFSTPSPPED-PDCPRAFVSEEDEVDGWLIIDLPDSYAAPPSPGAA---PAPAGRPPPA 63
LF +P PP+ P P A V P Y AP P + AP G PPP
Sbjct: 164 LFPPSPQPPDSTPRQPEASFEPHPSVT-------PTGYHAPMEPPTSRMFQAPPGAPPPH 216
Query: 64 PSL 66
P L
Sbjct: 217 PQL 219
Score = 30.0 bits (66), Expect = 1.6
Identities = 34/124 (27%), Positives = 43/124 (34%), Gaps = 29/124 (23%)
Query: 40 LPDSYAAPPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDL 99
L ++ A+PP GA P P P+P M + PP GP GP L SP
Sbjct: 310 LNNASASPPGLGAQPLPGHL--PSPHAMGQGMGGLPP------GPEKGPT-LAPSPHS-- 358
Query: 100 LIEHPSMSVYVTGSTIVLEPGSPS-PLPDAALPDGDLSEGELTPARREPRAARHAAPLPA 158
L P S S P P P S + ++ A+P PA
Sbjct: 359 -----------------LPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPA 401
Query: 159 RAAL 162
AL
Sbjct: 402 SQAL 405
>gi|22749337 THAP domain containing 8 [Homo sapiens]
Length = 274
Score = 38.1 bits (87), Expect = 0.006
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 23/159 (14%)
Query: 50 PGAAPAPAGRPPPAPS---LMDESWFVTPPACFTAEGP-GLGPARLQSSPLEDLLIEHPS 105
P A P+ R PPA S V+PP P PA S P+ L++ P+
Sbjct: 78 PDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVR-LVVLGPT 136
Query: 106 MSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEGELTPARREPRAARHAAPLPARAALLEK 165
T +T++L P +P+P P+ + P+ PA++ P AL +
Sbjct: 137 SGSPKTVATMLLTPLAPAPTPERSQPE--------VPAQQAQTGLG-----PVLGALQRR 183
Query: 166 AGQVRRLQRARQR--AERHALSAKAVQRQNRARESRPRR 202
VRRLQR ++R A+ AL A Q + +R RR
Sbjct: 184 ---VRRLQRCQERHQAQLQALERLAQQLHGESLLARARR 219
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 38.1 bits (87), Expect = 0.006
Identities = 37/135 (27%), Positives = 46/135 (34%), Gaps = 20/135 (14%)
Query: 41 PDSYAAPPSPGAAPAPAGRPPPA----PSLMDESWFVTPPACF-----------TAEGPG 85
P A PSP AP P PP+ P+ W TPPA + +G
Sbjct: 927 PKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAP 986
Query: 86 LGPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEGELTPARR 145
PA SP P + T GSP+ P P G + TP
Sbjct: 987 TPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATP---FPKGASTPPAATPP-- 1041
Query: 146 EPRAARHAAPLPARA 160
P+ + A PLP A
Sbjct: 1042 SPKGSPAATPLPKGA 1056
Score = 33.1 bits (74), Expect = 0.19
Identities = 47/186 (25%), Positives = 67/186 (36%), Gaps = 22/186 (11%)
Query: 45 AAPPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHP 104
AAP P + P P P P+L + F+ E P A L L+ P
Sbjct: 1792 AAPSPPVSLPLA---PSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADEDELLPLIPPEP 1848
Query: 105 SMSVYVTGSTIVLEP-----GSPSPLPDAALP------------DGDLSEGELTPARREP 147
S +V P G P P P A P D D S EL +
Sbjct: 1849 ISGGVPFQSVLVNMPTPKSAGIPVPTPSAKQPVTKNNKGSGTESDSDESVPEL-EEQDST 1907
Query: 148 RAARHAAPLPARAALLEKAGQVRRLQRARQRAERHALSAKAVQRQNRARESRPRRSKNQS 207
+A A L A A + E+ + R+ ++A R A+S +++ R+SKN
Sbjct: 1908 QATTQQAQLAAAAEIDEEPVSKAKQSRSEKKA-RKAMSKLGLRQVTGVTRVTIRKSKNIL 1966
Query: 208 SFIYQP 213
I +P
Sbjct: 1967 FVITKP 1972
Score = 30.8 bits (68), Expect = 0.95
Identities = 33/129 (25%), Positives = 43/129 (33%), Gaps = 16/129 (12%)
Query: 41 PDSYAAPPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLL 100
P A PSP AP P PP+P + TPP +G PA SP L
Sbjct: 1090 PKGGPATPSPKGAPMPPAATPPSP----KGGLATPP----HKGAPTTPAATPPSPKGGLA 1141
Query: 101 IEHPSMSVYVTGST-------IVLEPGSPSPLPDAALPDGDLSEGELTPARREPRAARHA 153
P + +T + P +P AA P G TP+ + A
Sbjct: 1142 TPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSP-KGGLATPSPKGAPTTPAA 1200
Query: 154 APLPARAAL 162
P + L
Sbjct: 1201 TPPSPKGGL 1209
Score = 29.6 bits (65), Expect = 2.1
Identities = 36/161 (22%), Positives = 56/161 (34%), Gaps = 22/161 (13%)
Query: 12 TPSPPEDPDCPRAFVSEEDEVDGWLIIDLPDSYAA--------------PPSPGAAPAPA 57
TP+ P + P S+E + P +Y PSP AP P
Sbjct: 1561 TPAIPTPKEAPATPSSKEASSPPAVT---PSTYKGAPSPKELLIPPAVTSPSPKEAPTPP 1617
Query: 58 GRPPPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSMSVYVTGSTIVL 117
PP+P E TP T P + P+ L+ SP + + S +
Sbjct: 1618 AVTPPSP----EKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLP 1673
Query: 118 EPGSPSPLPDAALPDGDLSEGELT-PARREPRAARHAAPLP 157
P+ L + + S +T P R+ P+ + +A P
Sbjct: 1674 AKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSP 1714
Score = 28.5 bits (62), Expect = 4.7
Identities = 36/119 (30%), Positives = 48/119 (40%), Gaps = 13/119 (10%)
Query: 47 PPSPGAAPAPAGRPPPAPSLMDESWFVTP-PACFTAEGPGLGPARLQSSPLEDLLIEHPS 105
PPSP AP P+ P +P + TP P+ P GPA +P + + S
Sbjct: 858 PPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPA--TPAPKQAPALSMTS 915
Query: 106 MSVYVTGSTIVLE--PGSPS----PLPDAALPDGDLSEGELTPARR---EPRAARHAAP 155
S +T + P SPS P P AA P G TP+ + P AA +P
Sbjct: 916 SSPKKARATPAPKGIPASPSPKGAPTPPAATPPSP-KGGPATPSPKWAPTPPAATPPSP 973
Score = 28.5 bits (62), Expect = 4.7
Identities = 37/151 (24%), Positives = 46/151 (30%), Gaps = 28/151 (18%)
Query: 11 STPSPPEDPDCPRAFVSEEDEVDGWLIIDLPDSYAAPPSPGAAPAPAGRPPPAPSLMDES 70
+TP P P P A + P A PS AP P PP+P
Sbjct: 1049 ATPLPKGAPTTPAATLPS------------PKGGPATPSLKGAPTPPAATPPSPK----- 1091
Query: 71 WFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPSPLPDAAL 130
PA + +G + PA SP + L P T P + P P L
Sbjct: 1092 ---GGPATPSPKGAPMPPAATPPSP-KGGLATPPHKGAPTT-------PAATPPSPKGGL 1140
Query: 131 PDGDLSEGELTPARREPRAARHAAPLPARAA 161
TPA P A P + A
Sbjct: 1141 ATPPPKGAPTTPAATPPSPKGGLATPPPKGA 1171
Score = 28.1 bits (61), Expect = 6.1
Identities = 36/156 (23%), Positives = 48/156 (30%), Gaps = 31/156 (19%)
Query: 11 STPSPPEDPDCPRAFVSEEDEVDGWLIIDLPDSYAAPPSPGAAP-APAGRPP-------- 61
+TPSP P P A P A PSP AP PA PP
Sbjct: 1187 ATPSPKGAPTTPAATPPS------------PKGGLATPSPKGAPTTPAATPPSPKGGLAT 1234
Query: 62 PAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGS 121
P+P + TPP+ GP P + +P P+ + + P
Sbjct: 1235 PSPKGAPTTPAATPPS--PKGGPATPPPKGAPTP--------PAATPPSLKGGLATPPHK 1284
Query: 122 PSPLPDAALPDGDLSEGELTPARREPRAARHAAPLP 157
+P P P +P + P P P
Sbjct: 1285 GAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSP 1320
Score = 27.7 bits (60), Expect = 8.0
Identities = 38/140 (27%), Positives = 46/140 (32%), Gaps = 27/140 (19%)
Query: 41 PDSYAAPPSPGAAPAPAGRPPPAPSLMDESWFVTP----------------PACFTAEGP 84
P P P AP P PP+P TP P T
Sbjct: 1320 PKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHK 1379
Query: 85 GLGPARLQSSPLEDLLIEHPS---MSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEGELT 141
G GPA SP I P S V + P +P AA P S+G+LT
Sbjct: 1380 G-GPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATP----SKGDLT 1434
Query: 142 PARREPRAARHAAPLPARAA 161
P P + + A PA +A
Sbjct: 1435 PPAVTPVSLKKA---PATSA 1451
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 37.7 bits (86), Expect = 0.008
Identities = 39/152 (25%), Positives = 55/152 (36%), Gaps = 8/152 (5%)
Query: 15 PPEDPDCPRAFV-SEEDEVDGWLIIDLPDSYAAPPSPGAA-PAPAGRPPPAPSLMDESWF 72
PPE+P P A V + E+ + P+ P SP AA P P PA ++
Sbjct: 1035 PPEEPTSPAAAVPTPEEPTSPAAAVPTPEE---PTSPAAAVPTPEEPTSPAAAVPTPEEP 1091
Query: 73 VTPPACFTAEGPGLGPARLQSSPLEDL--LIEHPSMSVYVTGSTIVLEPGSPS-PLPDAA 129
+P A PA +P E P+ + + V P P+ P P
Sbjct: 1092 TSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVP 1151
Query: 130 LPDGDLSEGELTPARREPRAARHAAPLPARAA 161
P+ S P E + A P PA +A
Sbjct: 1152 TPEESASAAVAVPTPEESASPAAAVPTPAESA 1183
Score = 28.1 bits (61), Expect = 6.1
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 3 QRLSSLFFSTPSPPEDPDCPRAFVSE-EDEVDGWLIIDLPDSYAAP----PSPGAAPAPA 57
+ LSS S P+ PE+P P A VS E+ + P+ A P P+P PA
Sbjct: 1265 EELSSPAASVPT-PEEPASPAAAVSNLEEPASPAAAVPTPEVAAIPAASVPTPEVPAIPA 1323
Query: 58 GRPPP 62
PP
Sbjct: 1324 AAVPP 1328
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 37.7 bits (86), Expect = 0.008
Identities = 46/162 (28%), Positives = 60/162 (37%), Gaps = 56/162 (34%)
Query: 46 APPSPGAAPAPA-------------------------GRPPPAPSLMDESWFVTPPA-CF 79
APP PGA P+PA GRPPP + W +PPA
Sbjct: 1138 APPPPGAPPSPAPARFTARGGRVFTPRGVPSRRGRGGGRPPPQ---VCPGW--SPPAKSL 1192
Query: 80 TAEGPGLGPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEGE 139
+ P GP PL++ LI P V GS GS + + DG+
Sbjct: 1193 APKKPPTGPLPPSKEPLKEKLIPGPLSPVARGGS----NGGS-----NVGMEDGE----- 1238
Query: 140 LTPARREPRAARHAAPLPARAALLEKAGQVRRLQRARQRAER 181
PR RH RA +K + RRL++ R+ A R
Sbjct: 1239 ------RPRRRRH-----GRAQQQDKPPRFRRLKQERENAAR 1269
Score = 34.3 bits (77), Expect = 0.086
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 40 LPDSYAAPPSPGAA-PAPAGRPPPAPSL-MDESWFVTPP 76
+P A PP P A P GRPPP P + D W + PP
Sbjct: 690 VPAPQAPPPPPKALYPGALGRPPPMPPMNFDPRWMMIPP 728
Score = 31.6 bits (70), Expect = 0.56
Identities = 41/147 (27%), Positives = 56/147 (38%), Gaps = 14/147 (9%)
Query: 47 PPSPGAAPAPAGRPPPAPSLMDESWFVTPPACF--TAEGPGLGPARLQS-SPLEDLLIEH 103
PPS +PA P P SL+ + P+ F T PG L S +P + +L+
Sbjct: 1924 PPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQPGGQSGFLPSGAPAQQMLLPM 1983
Query: 104 PSMSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEGELTPARREPRAARHAAPLPARAALL 163
+ V + P+P P + LP G PA + P A P PA L
Sbjct: 1984 VDSQLPVVNFGSLPPAPPPAPPPLSLLPVG--------PALQPPSLAVRPPPAPATRVLP 2035
Query: 164 EKAGQVRRLQRARQRAERHALSAKAVQ 190
A R + RAE H + K Q
Sbjct: 2036 SPA---RPFPASLGRAELHPVELKPFQ 2059
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 37.7 bits (86), Expect = 0.008
Identities = 48/186 (25%), Positives = 69/186 (37%), Gaps = 31/186 (16%)
Query: 39 DLPDSYAAPPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLED 98
D + A PSP + G PPAP TP AE G P L ++PL
Sbjct: 341 DKKEKSATRPSPSPERSSTGPEPPAP---------TP---LLAERHGGSPQPLATTPLSQ 388
Query: 99 LLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEGELTPARREP-RAARHAA--- 154
+ PS + + P SP LP + S E +P +P + +RHA+
Sbjct: 389 EPVNPPSEASPTRDRS---PPKSPEKLPQS-------SSSESSPPSPQPTKVSRHASSSP 438
Query: 155 ----PLPARAALLEKAGQVRRLQRARQRAERHALSAKAVQRQNRARESRPRRSKNQSSFI 210
P PA + E + R+ RA+R + R+ R P +K S
Sbjct: 439 ESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRR-MGRSRSPATAKRGRSRS 497
Query: 211 YQPCQR 216
P +R
Sbjct: 498 RTPTKR 503
Score = 32.3 bits (72), Expect = 0.33
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Query: 141 TPARREPRAA-----RHAAPLPARAALLEKAGQVRRLQRARQRAERHALSAKAVQRQNRA 195
TPARR R+ R + PAR RR R R R + S +R R+
Sbjct: 588 TPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRS 647
Query: 196 RESRP-RRSKNQS 207
R P RR +++S
Sbjct: 648 RSRTPARRGRSRS 660
Score = 29.6 bits (65), Expect = 2.1
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 141 TPARREPRAARHAAPLPARAALLEKAGQVRRLQRARQRAERHALSAKAVQRQNRARESRP 200
TPARR R+ PAR R R+R R ++ QR+ R+ S
Sbjct: 673 TPARRSGRSRSRT---PARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSE 729
Query: 201 RRSKNQSS 208
R++K+++S
Sbjct: 730 RKNKSRTS 737
Score = 29.3 bits (64), Expect = 2.8
Identities = 52/217 (23%), Positives = 74/217 (34%), Gaps = 42/217 (19%)
Query: 4 RLSSLFFSTPSPPEDPDCPRAFVSEEDEVDGWLIIDLPDSYAAPPSPGAAPAPAGRPPPA 63
RLS + S PE D PRA + D + P P APAP P +
Sbjct: 1590 RLSPRRSRSGSSPEVKDKPRAAPRAQSGSD------------SSPEP-KAPAPRALPRRS 1636
Query: 64 PSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPS 123
S + G GP+ SS E P GS EP + S
Sbjct: 1637 RS--------------GSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKS 1682
Query: 124 PLPDAALPDGDLSEGELTPARREPRAARHAAPLPA----------RAALLEKAGQVRRLQ 173
P S ELT R R +R A+ P R+ + + +
Sbjct: 1683 RTPPRRR--SSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSR 1740
Query: 174 RARQRAERHALSAKAVQRQNRARESRPR---RSKNQS 207
+R+R + K R+ R+ +PR RS+++S
Sbjct: 1741 SSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRS 1777
Score = 27.7 bits (60), Expect = 8.0
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 141 TPARREPRAARHAAPLPARAALLEKAGQVRRLQRARQRAERHALSAKAVQRQNRARESRP 200
TPARR R + P R ++ VRR + + +R S + +R+N++R S+
Sbjct: 685 TPARR----GRSRSRTPRRGRSRSRS-LVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQ- 738
Query: 201 RRSKNQSS 208
RRS++ SS
Sbjct: 739 RRSRSNSS 746
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 37.7 bits (86), Expect = 0.008
Identities = 45/175 (25%), Positives = 68/175 (38%), Gaps = 35/175 (20%)
Query: 51 GAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLGPARLQSSPLEDLLIEHPSMSVYV 110
GA PA R PP P E PP +A P P +P P+M
Sbjct: 12 GAPPAVVARTPPEPRPSPEGDPSPPPPPMSALVPDTPP----DTP--------PAMKNAT 59
Query: 111 TGSTIVLEPGSPS----PLPDAALPDGDLSEGEL---TPARREPRAAR------------ 151
+ + LEP SPS P P + SE + TP PR AR
Sbjct: 60 SSKQLPLEPESPSGQVGPRPAPPQEESPSSEAKSRGPTPPAMGPRDARPPRRSSQPSPTA 119
Query: 152 -HAAPLPARAALLEKAGQVRRLQRARQRAERHALSAKA---VQRQNRARESRPRR 202
A+ P ++KAG+ +L + R+ L+AK ++++ +A+ R ++
Sbjct: 120 VPASDSPPTKQEVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQ 174
Score = 34.3 bits (77), Expect = 0.086
Identities = 44/180 (24%), Positives = 66/180 (36%), Gaps = 20/180 (11%)
Query: 45 AAPPSPGAAPAPAGRPPPAPSLMDESWFVTPP-ACFTAEGPGLGPARLQSSPLEDLLIEH 103
AAP SP AP+PA P PAP ++ TP A P P S P+
Sbjct: 540 AAPASP--APSPAPSPTPAPPQKEQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDRE 597
Query: 104 PSMSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEGELTPARREPRAARHAAPLPARAALL 163
+ + ++ E + + E RE + AR A R A
Sbjct: 598 EA-------TRLLAEKRRQAREQREREEQERRLQAERDKRMREEQLAREAEARAEREAEA 650
Query: 164 EKAGQVRRLQRARQRAERHALSAKAVQRQNRARESRPR------RSKNQSSFIYQPCQRQ 217
+ R Q AR++A+ + +Q+Q E+R R R + + F Q +RQ
Sbjct: 651 RR----REEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQQQEQERQ 706
Score = 33.1 bits (74), Expect = 0.19
Identities = 50/197 (25%), Positives = 72/197 (36%), Gaps = 37/197 (18%)
Query: 47 PPSPGAAPA--PAGRPPPAPSLMDESWFVTPPACFTAE----------------GPGLGP 88
PP P +P P+ PPP +L+ ++ TPPA A GP P
Sbjct: 22 PPEPRPSPEGDPSPPPPPMSALVPDTPPDTPPAMKNATSSKQLPLEPESPSGQVGPRPAP 81
Query: 89 ARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPDGDL-----------SE 137
+ + SP + P+ G P S A+P D
Sbjct: 82 PQ-EESPSSEAKSRGPTPPAM--GPRDARPPRRSSQPSPTAVPASDSPPTKQEVKKAGER 138
Query: 138 GELTPARREPRAARHAAPLPARAALLEKAGQVR--RLQRARQRAERHALSAKAVQRQNRA 195
+L RRE RA AA EKA +R +LQ R+R E L A +++ A
Sbjct: 139 HKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQERRRRLEEQRLKA---EQRRAA 195
Query: 196 RESRPRRSKNQSSFIYQ 212
E R R+ ++ Y+
Sbjct: 196 LEERQRQKLEKNKERYE 212
Score = 30.4 bits (67), Expect = 1.2
Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 20/126 (15%)
Query: 84 PGLGP------ARLQSSPLEDLLIEHPSMSVYV---TGSTIVLEPGSPSPLPDAALPDGD 134
PG GP A L P D HPS +V V + S L P S + P G+
Sbjct: 330 PGRGPTWGRAGASLARGPQPDRT--HPSAAVPVCPRSASASPLTPCSVTRSVHRCAPAGE 387
Query: 135 LSEGELTPARREPRAARHAAPLPARAALLEKAGQVRRLQRARQRAERHALSAKAVQRQNR 194
E RR+P A AP+ R E + ++ ++ ++R SA A +R +
Sbjct: 388 RGE------RRKPNAGGSPAPVRRRP---EASPVQKKEKKDKERENEKEKSALARERSLK 438
Query: 195 ARESRP 200
R+S P
Sbjct: 439 KRQSLP 444
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 37.4 bits (85), Expect = 0.010
Identities = 47/157 (29%), Positives = 61/157 (38%), Gaps = 41/157 (26%)
Query: 51 GAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGLG---PARLQSSPLEDLLIEHPSMS 107
G AP+PA RP P +P AEG G G P+ L+ SP
Sbjct: 1447 GRAPSPAPRPVPG----------SPARDAPAEGSGEGLNSPSTLECSP------------ 1484
Query: 108 VYVTGSTIVLEPGSPSPLPDAALPDGD--LSEGELTPARREPRAARHAAPLPARAALLEK 165
GS +P SP P A PD D G L +E R+A+ R L +
Sbjct: 1485 ----GS----QPPSPGPATSPASPDLDPEAVRGALREFLQELRSAQR-----ERDELRTQ 1531
Query: 166 AGQVRRLQRARQRAERHALSAKAVQRQNRARESRPRR 202
+ R Q A AER + +++A Q Q ES R
Sbjct: 1532 TSALNR-QLAEMEAERDSATSRARQLQKAVAESEEAR 1567
>gi|30039694 zinc finger protein 598 [Homo sapiens]
Length = 904
Score = 37.4 bits (85), Expect = 0.010
Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 11/81 (13%)
Query: 16 PEDPDCPRAFVSEEDEVDG-------WLIIDLPDSYAAPPSPGAAPAPAGRPPPAPSLMD 68
PEDP PR + E G + S P +PG P PPP+P L D
Sbjct: 383 PEDPRGPRRSPRTQGEGPGPKETSTNGPVSQEAFSVTGPAAPGCVGVPGALPPPSPKLKD 442
Query: 69 ESW----FVTPPACFTAEGPG 85
E + T +C TA PG
Sbjct: 443 EDFPSLSASTSSSCSTAATPG 463
>gi|148229134 ring finger and KH domain containing 2 [Homo sapiens]
Length = 659
Score = 37.4 bits (85), Expect = 0.010
Identities = 40/127 (31%), Positives = 51/127 (40%), Gaps = 19/127 (14%)
Query: 40 LPDSYAAPPSPGAAPAPAGRPPPAPSLMDESWFVTPPACFTAEGPGL-GPARLQSSPLED 98
+P +A + AAPAP +PPP P PP + GP L G L L
Sbjct: 1 MPSGSSAALALAAAPAPLPQPPPPPPP------PPPPLPPPSGGPELEGDGLLLRERLAA 54
Query: 99 LLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPDGDLSE-GELTPARREPRAARHAAPLP 157
L ++ PS + EPG+P+ AA G EL+P R P R AP
Sbjct: 55 LGLDDPSPA----------EPGAPALRAPAAAAQGQARRAAELSPEERAP-PGRPGAPEA 103
Query: 158 ARAALLE 164
A L E
Sbjct: 104 AELELEE 110
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,432,501
Number of Sequences: 37866
Number of extensions: 752401
Number of successful extensions: 10154
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 649
Number of HSP's that attempted gapping in prelim test: 7244
Number of HSP's gapped (non-prelim): 2757
length of query: 220
length of database: 18,247,518
effective HSP length: 98
effective length of query: 122
effective length of database: 14,536,650
effective search space: 1773471300
effective search space used: 1773471300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.