Guide to the Human Genome
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Name: USP31 Sequence: fasta or formatted (1352aa) NCBI GI: 120587027
Description:

ubiquitin specific peptidase 31

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         96           3
 C cysteine            2.3         31           1
 D aspartate           4.4         60           2
 E glutamate           5.0         67           2
 F phenylalanine       2.9         39           2
 G glycine             6.7         90           4
 H histidine           2.8         38           2
 I isoleucine          2.1         28           2
 K lysine              5.8         79           2
 L leucine             8.1        110           2
 M methionine          1.5         20           2
 N asparagine          2.2         30           3
 P proline             8.4        113           4
 Q glutamine           5.1         69           2
 R arginine            6.7         90           2
 S serine             15.3        207           3
 T threonine           5.5         75           2
 V valine              5.3         71           2
 W tryptophan          1.0         13           1
 Y tyrosine            1.9         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin specific peptidase 31 
USP43                 0.256   ubiquitin specific protease 43 
USP4                  0.052   ubiquitin specific protease 4 isoform a 
USP4                  0.052   ubiquitin specific protease 4 isoform b 
USP15                 0.050   ubiquitin specific peptidase 15 
USP19                 0.046   ubiquitin thioesterase 19 
USP11                 0.042   ubiquitin specific peptidase 11 
USP8                  0.039   ubiquitin specific peptidase 8 
USP8                  0.039   ubiquitin specific peptidase 8 
USP8                  0.039   ubiquitin specific peptidase 8 
USP33                 0.034   ubiquitin specific protease 33 isoform 3 
USP33                 0.034   ubiquitin specific protease 33 isoform 1 
USP33                 0.034   ubiquitin specific protease 33 isoform 2 
USP20                 0.034   ubiquitin specific protease 20 
USP20                 0.034   ubiquitin specific protease 20 
USP20                 0.034   ubiquitin specific protease 20 
USP2                  0.032   ubiquitin specific peptidase 2 isoform b 
USP2                  0.032   ubiquitin specific peptidase 2 isoform a 
USP51                 0.029   ubiquitin specific protease 51 
USP32                 0.029   ubiquitin specific protease 32 
USP6                  0.029   ubiquitin specific protease 6 
USP3                  0.028   ubiquitin thiolesterase 3 
USP22                 0.027   ubiquitin thiolesterase 22 
USP27X                0.027   X-linked ubiquitin thioesterase 27 
USP21                 0.026   ubiquitin-specific protease 21 
USP21                 0.026   ubiquitin-specific protease 21 
DSPP                  0.023   dentin sialophosphoprotein preproprotein 
USP44                 0.023   ubiquitin thiolesterase 44 
USP44                 0.023   ubiquitin thiolesterase 44 
SRRM2                 0.022   splicing coactivator subunit SRm300 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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