Guide to the Human Genome
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Name: MEX3C Sequence: fasta or formatted (659aa) NCBI GI: 148229134
Description:

ring finger and KH domain containing 2

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5         76           8
 C cysteine            1.8         12           1
 D aspartate           3.8         25           2
 E glutamate           8.5         56           4
 F phenylalanine       2.7         18           1
 G glycine             8.6         57           2
 H histidine           1.7         11           1
 I isoleucine          3.5         23           1
 K lysine              2.3         15           1
 L leucine             7.7         51           4
 M methionine          1.8         12           2
 N asparagine          3.8         25           1
 P proline            10.9         72          11
 Q glutamine           3.0         20           3
 R arginine            5.9         39           2
 S serine              9.9         65           4
 T threonine           5.2         34           2
 V valine              5.2         34           2
 W tryptophan          0.5          3           1
 Y tyrosine            1.7         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger and KH domain containing 2 
MEX3B                 0.369   mex-3 homolog B 
MEX3D                 0.312   ring finger and KH domain containing 1 
MEX3A                 0.284   MEX3A protein 
PELP1                 0.031   proline, glutamic acid and leucine rich protein 1 [...
ARX                   0.027   aristaless related homeobox 
SAMD1                 0.027   sterile alpha motif domain containing 1 
ZIC5                  0.025   zinc finger protein of the cerebellum 5 
SCAF1                 0.025   SR-related CTD-associated factor 1 
VASP                  0.024   vasodilator-stimulated phosphoprotein 
CRTC1                 0.023   mucoepidermoid carcinoma translocated 1 isoform 3 [...
CRTC1                 0.023   mucoepidermoid carcinoma translocated 1 isoform 1 [...
FMNL2                 0.023   formin-like 2 
HCN2                  0.023   hyperpolarization activated cyclic nucleotide-gated...
KIAA1429              0.022   hypothetical protein LOC25962 isoform 1 
KIAA1429              0.022   hypothetical protein LOC25962 isoform 2 
WIPF3                 0.022   WAS/WASL interacting protein family, member 3 [Homo...
PCLO                  0.022   piccolo isoform 2 
PCLO                  0.022   piccolo isoform 1 
CASKIN1               0.021   CASK interacting protein 1 
STK11IP               0.021   LKB1 interacting protein 
PRR12                 0.021   proline rich 12 
RXRB                  0.021   retinoid X receptor, beta 
R3HDM1                0.021   R3H domain containing 1 
FOXK1                 0.021   forkhead box K1 
ZFHX4                 0.021   zinc finger homeodomain 4 
FOXG1                 0.021   forkhead box G1 
MARCH11               0.021   membrane-associated ring finger (C3HC4) 11 
DIAPH1                0.020   diaphanous 1 isoform 2 
DIAPH1                0.020   diaphanous 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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