Guide to the Human Genome
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Name: TP53INP1 Sequence: fasta or formatted (164aa) NCBI GI: 209180469
Description:

tumor protein p53 inducible nuclear protein 1 isoform b

Referenced in:

p53 Pathway

Other entries for this name:
alt prot [240aa] tumor protein p53 inducible nuclear protein 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3          7           1
 C cysteine            4.9          8           1
 D aspartate           4.9          8           2
 E glutamate          15.2         25           7
 F phenylalanine       6.1         10           1
 G glycine             3.7          6           2
 H histidine           2.4          4           1
 I isoleucine          3.7          6           1
 K lysine              2.4          4           1
 L leucine             7.3         12           2
 M methionine          3.0          5           1
 N asparagine          3.0          5           1
 P proline             7.9         13           3
 Q glutamine           1.8          3           1
 R arginine            2.4          4           1
 S serine             14.0         23           4
 T threonine           6.7         11           2
 V valine              4.3          7           1
 W tryptophan          1.2          2           1
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor protein p53 inducible nuclear protein 1 isofo... 
TP53INP1              0.962   tumor protein p53 inducible nuclear protein 1 isofor...
TP53INP2              0.132   tumor protein p53 inducible nuclear protein 2 
TTLL4                 0.032   tubulin tyrosine ligase-like family, member 4 [Homo...
MUC5AC                0.028   mucin 5AC 
MUC5B                 0.028   mucin 5, subtype B, tracheobronchial 
NEUROD1               0.022   neurogenic differentiation 1 
KIAA0406              0.022   hypothetical protein LOC9675 
PRKCSH                0.019   protein kinase C substrate 80K-H isoform 1 
PELP1                 0.019   proline, glutamic acid and leucine rich protein 1 [...
TAF7L                 0.016   TATA box binding protein-associated factor, RNA poly...
ZDBF2                 0.016   zinc finger, DBF-type containing 2 
ARID4B                0.016   AT rich interactive domain 4B isoform 1 
ATF7IP                0.016   activating transcription factor 7 interacting protei...
HAP1                  0.016   huntingtin-associated protein 1 isoform 4 
HAP1                  0.016   huntingtin-associated protein 1 isoform 3 
HAP1                  0.016   huntingtin-associated protein 1 isoform 2 
MYST4                 0.016   MYST histone acetyltransferase (monocytic leukemia)...
IMPG2                 0.016   interphotoreceptor matrix proteoglycan 2 
CDC2L2                0.016   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.016   cell division cycle 2-like 2 isoform 1 
SLC24A1               0.016   solute carrier family 24 (sodium/potassium/calcium ex...
CDC2L1                0.016   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.016   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.016   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.016   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.016   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.016   cell division cycle 2-like 1 (PITSLRE proteins) isof...
ATRX                  0.013   transcriptional regulator ATRX isoform 2 
ATRX                  0.013   transcriptional regulator ATRX isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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