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Search of human proteins with 34335264
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
(1135 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 2288 0.0
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 2274 0.0
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 2255 0.0
gi|238814389 zinc finger, MYND domain containing 11 isoform a [H... 186 1e-46
gi|238814385 zinc finger, MYND domain containing 11 isoform a [H... 186 1e-46
gi|238814387 zinc finger, MYND domain containing 11 isoform b [H... 182 2e-45
gi|47419911 transcriptional intermediary factor 1 alpha isoform ... 91 6e-18
gi|47419909 transcriptional intermediary factor 1 alpha isoform ... 91 6e-18
gi|74027251 tripartite motif-containing 33 protein isoform beta ... 90 1e-17
gi|74027249 tripartite motif-containing 33 protein isoform alpha... 81 6e-15
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 81 6e-15
gi|38788260 bromodomain PHD finger transcription factor isoform ... 75 5e-13
gi|38788274 bromodomain PHD finger transcription factor isoform ... 75 5e-13
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 71 5e-12
gi|209977097 tripartite motif-containing 66 [Homo sapiens] 70 9e-12
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 69 3e-11
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 69 3e-11
gi|20357588 TBP-associated factor 1 isoform 2 [Homo sapiens] 68 4e-11
gi|20357585 TBP-associated factor 1 isoform 1 [Homo sapiens] 68 4e-11
gi|24429572 TBP-associated factor RNA polymerase 1-like [Homo sa... 67 1e-10
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 65 3e-10
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 65 3e-10
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 64 8e-10
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa... 64 8e-10
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 63 1e-09
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 63 1e-09
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 63 1e-09
gi|239740827 PREDICTED: hypothetical protein XP_002344067 [Homo ... 62 3e-09
gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens] 61 7e-09
gi|239754269 PREDICTED: hypothetical protein [Homo sapiens] 60 1e-08
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 2288 bits (5928), Expect = 0.0
Identities = 1135/1135 (100%), Positives = 1135/1135 (100%)
Query: 1 MHPQSLAEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTS 60
MHPQSLAEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTS
Sbjct: 1 MHPQSLAEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTS 60
Query: 61 PIKKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDW 120
PIKKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDW
Sbjct: 61 PIKKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDW 120
Query: 121 FCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDY 180
FCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDY
Sbjct: 121 FCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDY 180
Query: 181 AEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKIC 240
AEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKIC
Sbjct: 181 AEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKIC 240
Query: 241 EHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDA 300
EHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDA
Sbjct: 241 EHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDA 300
Query: 301 RFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPF 360
RFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPF
Sbjct: 301 RFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPF 360
Query: 361 RTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRIS 420
RTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRIS
Sbjct: 361 RTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRIS 420
Query: 421 LSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAG 480
LSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAG
Sbjct: 421 LSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAG 480
Query: 481 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPL 540
SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPL
Sbjct: 481 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPL 540
Query: 541 ISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISD 600
ISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISD
Sbjct: 541 ISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISD 600
Query: 601 DEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKD 660
DEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKD
Sbjct: 601 DEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKD 660
Query: 661 KASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGRE 720
KASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGRE
Sbjct: 661 KASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGRE 720
Query: 721 GRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTV 780
GRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTV
Sbjct: 721 GRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTV 780
Query: 781 TVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQ 840
TVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQ
Sbjct: 781 TVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQ 840
Query: 841 SSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKN 900
SSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKN
Sbjct: 841 SSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKN 900
Query: 901 TTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQL 960
TTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQL
Sbjct: 901 TTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQL 960
Query: 961 ELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQ 1020
ELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQ
Sbjct: 961 ELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQ 1020
Query: 1021 EADAEVNTETLNKSSQGSSSSTQSAPSETASASKEKETSAEKSKESGSTLDLSGSRETPS 1080
EADAEVNTETLNKSSQGSSSSTQSAPSETASASKEKETSAEKSKESGSTLDLSGSRETPS
Sbjct: 1021 EADAEVNTETLNKSSQGSSSSTQSAPSETASASKEKETSAEKSKESGSTLDLSGSRETPS 1080
Query: 1081 SILLGSNQGSDHSRSNKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKESRLDTFWD 1135
SILLGSNQGSDHSRSNKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKESRLDTFWD
Sbjct: 1081 SILLGSNQGSDHSRSNKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKESRLDTFWD 1135
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 2274 bits (5892), Expect = 0.0
Identities = 1135/1160 (97%), Positives = 1135/1160 (97%), Gaps = 25/1160 (2%)
Query: 1 MHPQSLAEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTS 60
MHPQSLAEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTS
Sbjct: 1 MHPQSLAEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTS 60
Query: 61 PIKKKKKPGLLNSNNKEQ-------------------------DGRNDFYCWVCHREGQV 95
PIKKKKKPGLLNSNNKEQ DGRNDFYCWVCHREGQV
Sbjct: 61 PIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQV 120
Query: 96 LCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKF 155
LCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKF
Sbjct: 121 LCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKF 180
Query: 156 AIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWI 215
AIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWI
Sbjct: 181 AIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWI 240
Query: 216 LHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPL 275
LHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPL
Sbjct: 241 LHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPL 300
Query: 276 VWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFN 335
VWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFN
Sbjct: 301 VWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFN 360
Query: 336 SAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLN 395
SAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLN
Sbjct: 361 SAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLN 420
Query: 396 FDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFS 455
FDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFS
Sbjct: 421 FDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFS 480
Query: 456 ASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNL 515
ASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNL
Sbjct: 481 ASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNL 540
Query: 516 DRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDV 575
DRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDV
Sbjct: 541 DRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDV 600
Query: 576 YTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTN 635
YTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTN
Sbjct: 601 YTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTN 660
Query: 636 PVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPT 695
PVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPT
Sbjct: 661 PVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPT 720
Query: 696 VHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPET 755
VHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPET
Sbjct: 721 VHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPET 780
Query: 756 PVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWN 815
PVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWN
Sbjct: 781 PVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWN 840
Query: 816 SSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADI 875
SSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADI
Sbjct: 841 SSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADI 900
Query: 876 AKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLE 935
AKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLE
Sbjct: 901 AKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLE 960
Query: 936 LTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYC 995
LTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYC
Sbjct: 961 LTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYC 1020
Query: 996 DYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSSSTQSAPSETASASKE 1055
DYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSSSTQSAPSETASASKE
Sbjct: 1021 DYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSSSTQSAPSETASASKE 1080
Query: 1056 KETSAEKSKESGSTLDLSGSRETPSSILLGSNQGSDHSRSNKSSWSSSDEKRGSTRSDHN 1115
KETSAEKSKESGSTLDLSGSRETPSSILLGSNQGSDHSRSNKSSWSSSDEKRGSTRSDHN
Sbjct: 1081 KETSAEKSKESGSTLDLSGSRETPSSILLGSNQGSDHSRSNKSSWSSSDEKRGSTRSDHN 1140
Query: 1116 TSTSTKSLLPKESRLDTFWD 1135
TSTSTKSLLPKESRLDTFWD
Sbjct: 1141 TSTSTKSLLPKESRLDTFWD 1160
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 2255 bits (5844), Expect = 0.0
Identities = 1134/1188 (95%), Positives = 1134/1188 (95%), Gaps = 53/1188 (4%)
Query: 1 MHPQSLAEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTS 60
MHPQSLAEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTS
Sbjct: 1 MHPQSLAEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTS 60
Query: 61 PIKKKKKPGLLNSNNKEQ-------------------------DGRNDFYCWVCHREGQV 95
PIKKKKKPGLLNSNNKEQ DGRNDFYCWVCHREGQV
Sbjct: 61 PIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQV 120
Query: 96 LCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKF 155
LCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKF
Sbjct: 121 LCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKF 180
Query: 156 AIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWI 215
AIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWI
Sbjct: 181 AIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWI 240
Query: 216 LHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPL 275
LHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPL
Sbjct: 241 LHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPL 300
Query: 276 VWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFN 335
VWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFN
Sbjct: 301 VWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFN 360
Query: 336 SAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLN 395
SAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLN
Sbjct: 361 SAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLN 420
Query: 396 FDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFS 455
FDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFS
Sbjct: 421 FDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFS 480
Query: 456 ASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNL 515
ASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNL
Sbjct: 481 ASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNL 540
Query: 516 DRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDV 575
DRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDV
Sbjct: 541 DRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDV 600
Query: 576 YTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTN 635
YTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTN
Sbjct: 601 YTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTN 660
Query: 636 PVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPT 695
PVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPT
Sbjct: 661 PVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPT 720
Query: 696 VHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPET 755
VHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPET
Sbjct: 721 VHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPET 780
Query: 756 PVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWN 815
PVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWN
Sbjct: 781 PVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWN 840
Query: 816 SSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADI 875
SSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADI
Sbjct: 841 SSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADI 900
Query: 876 AKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLE 935
AKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLE
Sbjct: 901 AKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLE 960
Query: 936 LTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYC 995
LTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYC
Sbjct: 961 LTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYC 1020
Query: 996 DYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSSSTQSAPSETASASKE 1055
DYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSSSTQSAPSETASASKE
Sbjct: 1021 DYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSSSTQSAPSETASASKE 1080
Query: 1056 KETSAEKSKESGSTLDLSGSRETPSSILLGSNQGS------------------------- 1090
KETSAEKSKESGSTLDLSGSRETPSSILLGSNQGS
Sbjct: 1081 KETSAEKSKESGSTLDLSGSRETPSSILLGSNQGSVSKRCDKQPAYAPTTTDHQPHPNYP 1140
Query: 1091 ---DHSRSNKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKESRLDTFWD 1135
HSRSNKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKESRLDTFWD
Sbjct: 1141 AQKYHSRSNKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKESRLDTFWD 1188
>gi|238814389 zinc finger, MYND domain containing 11 isoform a [Homo
sapiens]
Length = 602
Score = 186 bits (471), Expect = 1e-46
Identities = 97/275 (35%), Positives = 150/275 (54%), Gaps = 22/275 (8%)
Query: 82 NDFYCWVCHREGQVLCCELCPRVYHAKCL------RLTSEPEGDWFCPECEKITVAECIE 135
+D+YC+ CH G+VL C+LC RVYH+KCL R +S P W CP C I +
Sbjct: 99 HDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSP---WQCPVCRSIKKKNTNK 155
Query: 136 TQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEK 195
+++ L+F + +MK+ D +K +HP Y + +D+ T+++
Sbjct: 156 -----------QEMGTYLRFIVSRMKERAIDLNKKGKD-NKHPMYRRLVHSAVDVPTIQE 203
Query: 196 NAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYL 255
+ Y E F ADA+ +LHN +I+ G + + IA+++ K HE++E+++C C+
Sbjct: 204 KVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADIARMLYKDTCHELDELQLCKNCFY 263
Query: 256 AACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFG-QHDRAWVPIN 314
+ + DNWFC PC H LVWAK+KGF FWPAK ++ +D QVD RFFG H RAW+P
Sbjct: 264 LSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQKEDNQVDVRFFGHHHQRAWIPSE 323
Query: 315 NCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIR 349
N ++ I K + A E+E++ +R
Sbjct: 324 NIQDITVNIHRLHVKRSMGWKKACDELELHQRFLR 358
Score = 95.9 bits (237), Expect = 2e-19
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 18/206 (8%)
Query: 816 SSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADI 875
+ +V+ K+ P T ++ + P S+ST ++A P + +
Sbjct: 401 NQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTND 460
Query: 876 AKYTSKMMDAIKGTMTEIYNDLS-------KNTTGSTIAE-IRRLRIEIEKLQWLHQQEL 927
S D T+I+ND K T + E + +LR E+E+ + +Q +
Sbjct: 461 GVCQSMCHDKY----TKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEK---RQAV 513
Query: 928 SEMKHNLELTM-AEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIF 986
++ N++ M + +Q E+ ++ + E+KK L + +Q + +TKKKQWC NC++EA++
Sbjct: 514 NKAVANMQGEMDRKCKQVKEKCKEEFVEEIKK-LATQHKQLISQTKKKQWCYNCEEEAMY 572
Query: 987 YCCWNTSYCDYPCQQAHW-PEHMKSC 1011
+CCWNTSYC CQQ HW EH ++C
Sbjct: 573 HCCWNTSYCSIKCQQEHWHAEHKRTC 598
>gi|238814385 zinc finger, MYND domain containing 11 isoform a [Homo
sapiens]
Length = 602
Score = 186 bits (471), Expect = 1e-46
Identities = 97/275 (35%), Positives = 150/275 (54%), Gaps = 22/275 (8%)
Query: 82 NDFYCWVCHREGQVLCCELCPRVYHAKCL------RLTSEPEGDWFCPECEKITVAECIE 135
+D+YC+ CH G+VL C+LC RVYH+KCL R +S P W CP C I +
Sbjct: 99 HDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSP---WQCPVCRSIKKKNTNK 155
Query: 136 TQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEK 195
+++ L+F + +MK+ D +K +HP Y + +D+ T+++
Sbjct: 156 -----------QEMGTYLRFIVSRMKERAIDLNKKGKD-NKHPMYRRLVHSAVDVPTIQE 203
Query: 196 NAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYL 255
+ Y E F ADA+ +LHN +I+ G + + IA+++ K HE++E+++C C+
Sbjct: 204 KVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADIARMLYKDTCHELDELQLCKNCFY 263
Query: 256 AACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFG-QHDRAWVPIN 314
+ + DNWFC PC H LVWAK+KGF FWPAK ++ +D QVD RFFG H RAW+P
Sbjct: 264 LSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQKEDNQVDVRFFGHHHQRAWIPSE 323
Query: 315 NCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIR 349
N ++ I K + A E+E++ +R
Sbjct: 324 NIQDITVNIHRLHVKRSMGWKKACDELELHQRFLR 358
Score = 95.9 bits (237), Expect = 2e-19
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 18/206 (8%)
Query: 816 SSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADI 875
+ +V+ K+ P T ++ + P S+ST ++A P + +
Sbjct: 401 NQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTND 460
Query: 876 AKYTSKMMDAIKGTMTEIYNDLS-------KNTTGSTIAE-IRRLRIEIEKLQWLHQQEL 927
S D T+I+ND K T + E + +LR E+E+ + +Q +
Sbjct: 461 GVCQSMCHDKY----TKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEK---RQAV 513
Query: 928 SEMKHNLELTM-AEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIF 986
++ N++ M + +Q E+ ++ + E+KK L + +Q + +TKKKQWC NC++EA++
Sbjct: 514 NKAVANMQGEMDRKCKQVKEKCKEEFVEEIKK-LATQHKQLISQTKKKQWCYNCEEEAMY 572
Query: 987 YCCWNTSYCDYPCQQAHW-PEHMKSC 1011
+CCWNTSYC CQQ HW EH ++C
Sbjct: 573 HCCWNTSYCSIKCQQEHWHAEHKRTC 598
>gi|238814387 zinc finger, MYND domain containing 11 isoform b [Homo
sapiens]
Length = 567
Score = 182 bits (461), Expect = 2e-45
Identities = 97/275 (35%), Positives = 150/275 (54%), Gaps = 23/275 (8%)
Query: 82 NDFYCWVCHREGQVLCCELCPRVYHAKCL------RLTSEPEGDWFCPECEKITVAECIE 135
+D+YC+ CH G+VL C+LC RVYH+KCL R +S P W CP C I +
Sbjct: 99 HDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSP---WQCPVCRSIKKKNTNK 155
Query: 136 TQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEK 195
+++ L+F + +MK+ D +K +HP Y + +D+ T+++
Sbjct: 156 -----------QEMGTYLRFIVSRMKERAIDLNKKGKD-NKHPMYRRLVHSAVDVPTIQE 203
Query: 196 NAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYL 255
+ Y E F ADA+ +LHN +I+ G + + IA+++ K HE++E+++C C+
Sbjct: 204 KVNEGKYRSYEEFKADAQLLLHNTVIFYGDSEQ-ADIARMLYKDTCHELDELQLCKNCFY 262
Query: 256 AACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFG-QHDRAWVPIN 314
+ + DNWFC PC H LVWAK+KGF FWPAK ++ +D QVD RFFG H RAW+P
Sbjct: 263 LSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQKEDNQVDVRFFGHHHQRAWIPSE 322
Query: 315 NCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIR 349
N ++ I K + A E+E++ +R
Sbjct: 323 NIQDITVNIHRLHVKRSMGWKKACDELELHQRFLR 357
Score = 40.0 bits (92), Expect = 0.013
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 816 SSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADI 875
+ +V+ K+ P T ++ + P S+ST ++A P + +
Sbjct: 400 NQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTND 459
Query: 876 AKYTSKMMDAIKGTMTEIYNDLS-------KNTTGSTIAE-IRRLRIEIEKLQWLHQQEL 927
S D T+I+ND K T + E + +LR E+E+ + +Q +
Sbjct: 460 GVCQSMCHDKY----TKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEK---RQAV 512
Query: 928 SEMKHNLELTM-AEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQW 976
++ N++ M + +Q E+ ++ + E+KK L + +Q + +TKKKQW
Sbjct: 513 NKAVANMQGEMDRKCKQVKEKCKEEFVEEIKK-LATQHKQLISQTKKKQW 561
>gi|47419911 transcriptional intermediary factor 1 alpha isoform a
[Homo sapiens]
Length = 1050
Score = 90.9 bits (224), Expect = 6e-18
Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 32 SAERTAQKRKFPSPPHSSNGHSP---QDTSTSP----IKKKKKPGLLNSNNKEQDGRNDF 84
S T+++ S S G P QD S++ + +K L +++D N+
Sbjct: 768 SQSSTSEETVLRSDAPDSTGDQPGLHQDNSSNGKSEWLDPSQKSPLHVGETRKEDDPNED 827
Query: 85 YCWVCHREGQVLCCELCPRVYHAKC--LRLTSEPEGDWFCPECEKITVAEC---IETQSK 139
+C VC G++LCCE CP+V+H C LT+ P G+W C C ++ E + S
Sbjct: 828 WCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSKPEVEYDCDAPSH 887
Query: 140 AMTMLTIEQLSYLLKFAIQKMKQ--------PGTDAFQKPVPLEQHPDYAEYIFHPMDLC 191
E L L +K ++ + AFQ PVPL PDY + I +PMDL
Sbjct: 888 NSEKKKTEGLVKLTPIDKRKCERLLLFLYCHEMSLAFQDPVPLTV-PDYYKIIKNPMDLS 946
Query: 192 TLEKNAKK--KMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKI 239
T++K ++ MY E F+AD + I NC +N + +++A IK+
Sbjct: 947 TIKKRLQEDYSMYSKPEDFVADFRLIFQNCAEFNEPD---SEVANAGIKL 993
>gi|47419909 transcriptional intermediary factor 1 alpha isoform b
[Homo sapiens]
Length = 1016
Score = 90.9 bits (224), Expect = 6e-18
Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 32 SAERTAQKRKFPSPPHSSNGHSP---QDTSTSP----IKKKKKPGLLNSNNKEQDGRNDF 84
S T+++ S S G P QD S++ + +K L +++D N+
Sbjct: 734 SQSSTSEETVLRSDAPDSTGDQPGLHQDNSSNGKSEWLDPSQKSPLHVGETRKEDDPNED 793
Query: 85 YCWVCHREGQVLCCELCPRVYHAKC--LRLTSEPEGDWFCPECEKITVAEC---IETQSK 139
+C VC G++LCCE CP+V+H C LT+ P G+W C C ++ E + S
Sbjct: 794 WCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSKPEVEYDCDAPSH 853
Query: 140 AMTMLTIEQLSYLLKFAIQKMKQ--------PGTDAFQKPVPLEQHPDYAEYIFHPMDLC 191
E L L +K ++ + AFQ PVPL PDY + I +PMDL
Sbjct: 854 NSEKKKTEGLVKLTPIDKRKCERLLLFLYCHEMSLAFQDPVPLTV-PDYYKIIKNPMDLS 912
Query: 192 TLEKNAKK--KMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKI 239
T++K ++ MY E F+AD + I NC +N + +++A IK+
Sbjct: 913 TIKKRLQEDYSMYSKPEDFVADFRLIFQNCAEFNEPD---SEVANAGIKL 959
>gi|74027251 tripartite motif-containing 33 protein isoform beta [Homo
sapiens]
Length = 1110
Score = 89.7 bits (221), Expect = 1e-17
Identities = 60/189 (31%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 72 NSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPECEKIT 129
+ NNK+ D D +C VC G +LCCE CP+V+H C L S P GDW C C I
Sbjct: 877 DGNNKDDDPNED-WCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 935
Query: 130 VAEC------IETQSKAMTMLTIEQLSYLL--KFAIQKMKQPGTDAFQKPVPLEQHPDYA 181
E ++ K T + + + + + FQ+PVP P+Y
Sbjct: 936 KPEVEYDCDNLQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASI-PNYY 994
Query: 182 EYIFHPMDLCTLEKNAKKKM---YGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIK 238
+ I PMDL T++K +KK Y + F+AD + I NC +N + ++ Q K V
Sbjct: 995 KIIKKPMDLSTVKKKLQKKHSQHYQIPDDFVADVRLIFKNCERFNEADSEVAQAGKAVAL 1054
Query: 239 ICEHEMNEI 247
E ++ EI
Sbjct: 1055 YFEDKLTEI 1063
>gi|74027249 tripartite motif-containing 33 protein isoform alpha
[Homo sapiens]
Length = 1127
Score = 80.9 bits (198), Expect = 6e-15
Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 72 NSNNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPECEKIT 129
+ NNK+ D D +C VC G +LCCE CP+V+H C L S P GDW C C I
Sbjct: 877 DGNNKDDDPNED-WCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 935
Query: 130 VAEC------IETQSKAMTMLTIEQLSYLL--KFAIQKMKQPGTDAFQKPVPLEQHPDYA 181
E ++ K T + + + + + FQ+PVP P+Y
Sbjct: 936 KPEVEYDCDNLQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASI-PNYY 994
Query: 182 EYIFHPMDLCTLEKNAKKK---MYGCTEAFLADAKWILHNCIIYN 223
+ I PMDL T++K +KK Y + F+AD + I NC +N
Sbjct: 995 KIIKKPMDLSTVKKKLQKKHSQHYQIPDDFVADVRLIFKNCERFN 1039
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 80.9 bits (198), Expect = 6e-15
Identities = 127/702 (18%), Positives = 255/702 (36%), Gaps = 14/702 (1%)
Query: 422 SDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGS 481
SD S S +S + + D+ + SS S S +S D D S +S + + + ++ S
Sbjct: 572 SDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSES 631
Query: 482 LSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLI 541
S S + + +D + ++ S + N S D + S S ++
Sbjct: 632 DSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSD 691
Query: 542 SPKRQIRSRFQLNLDKT-IESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISD 600
S S + D + +S + N S D ++ S+ S SDSSDS S+
Sbjct: 692 SSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSN 751
Query: 601 DEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKD 660
S + D S+ +N + +S +S+ ++ D
Sbjct: 752 SSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSD 811
Query: 661 KASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGRE 720
+ + + D D +DS G DSDS + D S
Sbjct: 812 SSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSS 871
Query: 721 GRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTV 780
N + + S + + S + S + S + S+ + ++ S++S+
Sbjct: 872 DSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSD 931
Query: 781 TVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQ 840
+ + + +++ +S + + + S S+ + S+
Sbjct: 932 NSNSSDSSNSSDSSDSSDSSNSSDSSN-------SSDSSNSSDSSDSNSSDSSDSSNSSD 984
Query: 841 SSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKN 900
SS SS S + SS ++D ++ S+D + + +S D+ + + +D S +
Sbjct: 985 SSDSSDSSDSSDSSDSSNSSDSSDSSDSSD--SSNSSDSSNSSDSSNSSDSSDSSDSSDS 1042
Query: 901 TTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELT-MAEMRQSLEQERDRLIAEVKKQ 959
+ S ++ + + S+ + + + +E S + ++
Sbjct: 1043 SDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDS 1102
Query: 960 LELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATAPQ 1019
+ ++ +N + ++S + E S S ++
Sbjct: 1103 SDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDS 1162
Query: 1020 QE-ADAEVNTETLNKS-SQGSSSSTQSAPSETASASKEKETSAEKSKESGSTLDLSGSRE 1077
+ +D+ ++++ + S S SS S+ S+ S +S S + S++ S S S+ S
Sbjct: 1163 SDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDS 1222
Query: 1078 TPSSILLGSNQGSDHSRSNKSSWSSSDEKRGSTRSDHNTSTS 1119
+ SS SN+ SD S S+ SS SS+ S SD + STS
Sbjct: 1223 SDSSDSSDSNESSDSSDSSDSS-DSSNSSDSSDSSDSSDSTS 1263
Score = 77.0 bits (188), Expect = 9e-14
Identities = 131/700 (18%), Positives = 258/700 (36%), Gaps = 42/700 (6%)
Query: 430 STNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPF 489
S++S+ + SD ++ S S S S D D S +S +S + + S S S K
Sbjct: 571 SSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSE 630
Query: 490 SPQLSAPITTKTDKTSTTGSILNLNLDRSKAE-----MDLKELSESVQQQSTPVPLISPK 544
S S+ +K+D + + S + N D S + D + S+S S+ S
Sbjct: 631 SD--SSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSD 688
Query: 545 RQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQK 604
S + + + S + ++ S+ + SDS+ S SDSSDS SD
Sbjct: 689 SSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNS--NSSDSDSSNSSDSSDSSNSSDSSDS 746
Query: 605 SKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASP 664
S + + S+ ++ + +S +S+ +D D ++
Sbjct: 747 SDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNS 806
Query: 665 EPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKN 724
D S+ + D D +DS DS S+ D S R N
Sbjct: 807 SDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSD---GSDSDSSNRSDSSN 863
Query: 725 KKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTA 784
+ + S + + S + S + ++ + SS S+ + ++ S+ S+ + +
Sbjct: 864 SSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDS 923
Query: 785 PAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPL 844
+ + +++ + +S++ + S ++S + S+ SS
Sbjct: 924 SESSNSSDNSNSSDSSNSSDSSDSSD----SSNSSDSSNSSDSSNSSDSSDSNSSDSSDS 979
Query: 845 VTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGS 904
SS S + SS ++D ++ S+D + +S D+ + + +D S ++ S
Sbjct: 980 SNSSDSSDSSDSSDSSDSSDSSNSSD-----SSDSSDSSDSSNSSDSSNSSDSSNSSDSS 1034
Query: 905 TIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEK 964
++ + S+ + + + + D ++ +
Sbjct: 1035 DSSD---------------SSDSSDSSDSSDSSDSSNSSDSSDSSDS--SDSSDSSDSSD 1077
Query: 965 QQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADA 1024
E+ +N + ++S + + S S ++ ++
Sbjct: 1078 SSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSD 1137
Query: 1025 EVNTETLNKSSQGSSSS--TQSAPSETASASKEKETSAEKSKESGSTLDLSGSRETPSSI 1082
N+ + SS+ S SS + S+ S +S S + S++ S S S+ S + SS
Sbjct: 1138 SSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSD 1197
Query: 1083 LLGSNQGSDHSRSNKSSWSS--SDEKRGSTRSDHNTSTST 1120
S+ SD S S+ SS SS SD S SD N S+ +
Sbjct: 1198 SSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDS 1237
Score = 72.4 bits (176), Expect = 2e-12
Identities = 129/706 (18%), Positives = 258/706 (36%), Gaps = 65/706 (9%)
Query: 422 SDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGS 481
SD S S+NSS + S D+ ++SS S S +S D D S +S +S + + S
Sbjct: 651 SDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDS 710
Query: 482 LSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAE--MDLKELSESVQQQSTPVP 539
S S S+ + S+ S + + D S + D + S+S +
Sbjct: 711 DSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDS 770
Query: 540 LISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYIS 599
S S + D + S + + S + + + SDS DS+ S+SSDS S
Sbjct: 771 SDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSS 830
Query: 600 D--DEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGA 657
D D S + + ++ +G D + ++ +S +S +D
Sbjct: 831 DSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSS---------DSSDSSNSSDSSD 881
Query: 658 VKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHS 717
D D S+ + S D D +DS +S + S D+S
Sbjct: 882 SSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSS--------DNS 933
Query: 718 GREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTS 777
N + + S + ++ S+S + S + +S + ++ +S S
Sbjct: 934 NSSDSSNSSDSSDSSDSSN--------SSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDS 985
Query: 778 STVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVT 837
S + ++ + ++ S NSS + S S+
Sbjct: 986 SDSSDSSDSSDSSDSS---------------------NSSDSSDSSDSSDSSNSS----D 1020
Query: 838 STQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDL 897
S+ SS SS S + SS ++D ++ S+D + +S D+ + + +D
Sbjct: 1021 SSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSD-----SSNSSDSSDSSDSSDSSDSSDS 1075
Query: 898 SKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVK 957
S ++ S ++ + + S+ + + + + + D ++
Sbjct: 1076 SDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDS--SDSS 1133
Query: 958 KQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATA 1017
+ ++ + ++ + ++S ++ + S S ++
Sbjct: 1134 DSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSS 1193
Query: 1018 PQQEADAEVNTETLNKSSQGSSSSTQSAPSETASASKEKETS----AEKSKESGSTLDLS 1073
++ ++ + SS S SS S S+++ +S E+S + S +S ++ D S
Sbjct: 1194 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSS 1253
Query: 1074 GSRETPSSILLGSNQGSDHSRSNKSSWSSSDEKRGSTRSDHNTSTS 1119
S ++ S +++ S+S + + SD S SD N STS
Sbjct: 1254 DSSDSSDSTSDSNDESDSQSKSGNGNNNGSDSDSDSEGSDSNHSTS 1299
Score = 70.5 bits (171), Expect = 9e-12
Identities = 99/546 (18%), Positives = 203/546 (37%), Gaps = 30/546 (5%)
Query: 582 SDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKE 641
SDS DS+ SDSS+S SD ++ + D + D S+ +N + +
Sbjct: 547 SDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSD 606
Query: 642 ELKSTSPASEKADPGAVKDKASPEPE-KDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGL 700
S+ + + D + E + D K+ S D D +DS
Sbjct: 607 SSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSS 666
Query: 701 DSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTR 760
DS S+ D S N + + S + + S + S S +
Sbjct: 667 DSSDSSD-----SSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNS 721
Query: 761 SSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQ 820
+S+ + ++ ++ ++ +S++ + + ++ S ++S+
Sbjct: 722 NSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDS--------------SNSSDS 767
Query: 821 QKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTS 880
S S+ + S SS SS S ++ SS ++D ++ S+D + + +S
Sbjct: 768 SDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSS 827
Query: 881 KMMDAIKGTMTEIYNDLSKNTTGSTIAEIRR-----LRIEIEKLQWLHQQELSEMKHNLE 935
D+ + + +D S ++ GS R + + + S+ + E
Sbjct: 828 NSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNE 887
Query: 936 LTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYC 995
+ + D ++ + ++ + +N + N+S
Sbjct: 888 SSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSES---SNSSDNSNSSDSSNSSDS 944
Query: 996 DYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKS-SQGSSSSTQSAPSETASASK 1054
++ + S S ++ ++++ ++++ N S S SS S+ S+ S +S S
Sbjct: 945 SDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSS 1004
Query: 1055 EKETSAEKSKESGSTLDLSGSRETPSSILLGSNQGSDHSRSNKSSWSSSDEKRGSTRSDH 1114
+ S++ S S S+ + S + SS S+ SD S S+ SS SSD S SD
Sbjct: 1005 DSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSS-DSSDSSNSSDSSDS 1063
Query: 1115 NTSTST 1120
+ S+ +
Sbjct: 1064 SDSSDS 1069
Score = 60.1 bits (144), Expect = 1e-08
Identities = 104/563 (18%), Positives = 206/563 (36%), Gaps = 44/563 (7%)
Query: 563 KAQLGINEISEDVYTAVEHSDSE-DSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMD 621
K+ G + S D + ++SE D+ S D+ Y SD+ + + N D +G + D
Sbjct: 458 KSMQGDDPNSSDESNGNDDANSESDNNSSSRGDASYNSDESKDNGNG----SDSKGAEDD 513
Query: 622 KEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPI 681
S TN + + + ++K+D G K +S D S + S
Sbjct: 514 DSDST-----SDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSD 568
Query: 682 KDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGR--KNKKEPKEPSPKQDVVG 739
D +DS + DSDS D + + + + + + S D
Sbjct: 569 SDSSDSNSSSDSDSS----DSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKS 624
Query: 740 KTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRP 799
+ S + S S ++ +S+ +S ++ +S SS + ++ + ++ S
Sbjct: 625 DSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSS 684
Query: 800 LLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVN 859
NSS + + S S+ S+ SS +S S S+ +S +
Sbjct: 685 ---------------NSSDSSDSSDSSNSSESS----DSSDSSDSDSSDSSDSSNSNSSD 725
Query: 860 ADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKL 919
+D ++ S+D +S D+ + + +D S ++ S ++ +
Sbjct: 726 SDSSNSSDSSD--------SSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSS 777
Query: 920 QWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCAN 979
+ + ++ ++ + + + D + + + +N
Sbjct: 778 DSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSN 837
Query: 980 CKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSS 1039
+ + S D + S + ++ +D+ + E+ N S S
Sbjct: 838 SSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDS 897
Query: 1040 SSTQSAPSETASASKEKETSAEKSKESGSTLDLSGSRETPSSILLGSNQGSDHSRSNKSS 1099
S++ + S +S S + S+ S S S+ S + SS S+ SD S S+ SS
Sbjct: 898 SNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSS 957
Query: 1100 WSSSDEKRGSTRSDHNTSTSTKS 1122
+SSD S SD N+S S+ S
Sbjct: 958 -NSSDSSNSSDSSDSNSSDSSDS 979
Score = 33.5 bits (75), Expect = 1.2
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 1023 DAEVNTETLNKSSQGSSSSTQSAPSETASASK-EKETSAEKSKESGSTLDLSGSRETPSS 1081
D + + N S + + + ++ S+ S+S+ + ++++SK++G+ D G+ + S
Sbjct: 457 DKSMQGDDPNSSDESNGNDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDDSD 516
Query: 1082 ILL----------GSNQGSDHSRSN----KSSWSSSDEKRGSTRSDHNTSTSTKS 1122
G+N D+ +S+ KS S SD S SD + S+ + S
Sbjct: 517 STSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDS 571
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 74.7 bits (182), Expect = 5e-13
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 43 PSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQDGRNDFYCWVC---HREGQV-LCC 98
P+ P +S ++ S K KKK ++++ +KE YC +C + E + + C
Sbjct: 2685 PTLPAASQKRKREEEKDSSSKSKKKK-MISTTSKETKKDTKLYC-ICKTPYDESKFYIGC 2742
Query: 99 ELCPRVYHAKCLR-LTSEPE--GDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLK- 154
+ C YH +C+ L SE E ++ CP+C+ A + T +T E L +L+
Sbjct: 2743 DRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTEDAMTVLTP---LTEKDYEGLKRVLRS 2799
Query: 155 FAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKW 214
KM P F +PV PDY I PMDL T+E+ +++ Y F+AD
Sbjct: 2800 LQAHKMAWP----FLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADMTK 2855
Query: 215 ILHNCIIYNGGNHKLTQIAKVV 236
I NC YN + Q A+V+
Sbjct: 2856 IFDNCRYYNPSDSPFYQCAEVL 2877
Score = 55.5 bits (132), Expect = 3e-07
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 83 DFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPEC--EKIT-VAECIETQ 137
D +C VCH+ G +LCCE C VYH +C++ L PE +W C C K+ V +C+
Sbjct: 390 DDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEI 449
Query: 138 SKAMTMLTIEQLSY 151
K + E + Y
Sbjct: 450 QKNKPYIRHEPIGY 463
Score = 37.7 bits (86), Expect = 0.062
Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 15/238 (6%)
Query: 715 DHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATT 774
++ ++ KN++E ++ S ++D KTP S T V + ++ ++ G T
Sbjct: 584 ENDSKDAEKNREEFEDQSLEKDSDDKTPDDDPEQGKSEEPTEVGDKGNSVSANLGDNTTN 643
Query: 775 STSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTIT 834
+TS T+P+ + + P +++ ++ V + E S+ T
Sbjct: 644 ATSEE---TSPSEGRSPVGCLSETP----DSSNMAEKKVASELPQDVPEEPNKTCESSNT 696
Query: 835 LVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIY 894
T+T P + +S S S L SS + A + + S + + +E
Sbjct: 697 SATTTSIQPNLENSNSSSELNSSQSESAKAADDPENGERESHTPVSIQEEIVGDFKSEKS 756
Query: 895 N-DLS------KNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSL 945
N +LS K +GST I RLR KL L Q+++ H E ++ L
Sbjct: 757 NGELSESPGAGKGASGST-RIITRLRNPDSKLSQLKSQQVAAAAHEANKLFKEGKEVL 813
Score = 37.0 bits (84), Expect = 0.11
Identities = 62/259 (23%), Positives = 96/259 (37%), Gaps = 35/259 (13%)
Query: 635 NPVEIKEELKSTSPASEKADPGAVKDKASPEP---EKDFSEKAKPSPH-PIKDKLKGKDE 690
N E K L S+S A G +D P E D ++ PS P + + ++
Sbjct: 1605 NSSETKSHLLSSSDAE-----GNYRDSLETLPSTKESDSTQTTTPSASCPESNSVNQVED 1659
Query: 691 TDSPTVHLG------LDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPS 744
+ T + + S+ ES L D D +G KN+ E K + T +
Sbjct: 1660 MEIETSEVKKVTSSPITSEEESNLSNDF-IDENGLPINKNENVNGESKRKTVITEVTTMT 1718
Query: 745 TTVGSHSPPETPVLT--RSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLP 802
+TV + S V + + +S +T T++T TVT + +TG V
Sbjct: 1719 STVATESKTVIKVEKGDKQTVVSSTENCAKSTVTTTTTTVTKLSTPSTGGSVD------- 1771
Query: 803 KETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADL 862
+ V S TV +T S +T+ TLVTS V+ S V +
Sbjct: 1772 ------IISVKEQSKTVVTTTVTDSLTTTGGTLVTSM----TVSKEYSTRDKVKLMKFSR 1821
Query: 863 PIATASADVAADIAKYTSK 881
P T S K+ +K
Sbjct: 1822 PKKTRSGTALPSYRKFVTK 1840
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 74.7 bits (182), Expect = 5e-13
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 43 PSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQDGRNDFYCWVC---HREGQV-LCC 98
P+ P +S ++ S K KKK ++++ +KE YC +C + E + + C
Sbjct: 2702 PTLPAASQKRKREEEKDSSSKSKKKK-MISTTSKETKKDTKLYC-ICKTPYDESKFYIGC 2759
Query: 99 ELCPRVYHAKCLR-LTSEPE--GDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLK- 154
+ C YH +C+ L SE E ++ CP+C+ A + T +T E L +L+
Sbjct: 2760 DRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTEDAMTVLTP---LTEKDYEGLKRVLRS 2816
Query: 155 FAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKW 214
KM P F +PV PDY I PMDL T+E+ +++ Y F+AD
Sbjct: 2817 LQAHKMAWP----FLEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADMTK 2872
Query: 215 ILHNCIIYNGGNHKLTQIAKVV 236
I NC YN + Q A+V+
Sbjct: 2873 IFDNCRYYNPSDSPFYQCAEVL 2894
Score = 55.5 bits (132), Expect = 3e-07
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 83 DFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPEC--EKIT-VAECIETQ 137
D +C VCH+ G +LCCE C VYH +C++ L PE +W C C K+ V +C+
Sbjct: 390 DDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEI 449
Query: 138 SKAMTMLTIEQLSY 151
K + E + Y
Sbjct: 450 QKNKPYIRHEPIGY 463
Score = 46.2 bits (108), Expect = 2e-04
Identities = 51/258 (19%), Positives = 104/258 (40%), Gaps = 16/258 (6%)
Query: 727 EPKEPS-PKQDVVGKTPPSTTVGSHSPPET-PVLTRSSAQTSAAGATATTSTSSTVTVTA 784
+P+ P+ P+ + TTV SH P E P +SS AA + ++ V
Sbjct: 2284 QPQSPAQPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRV 2343
Query: 785 PAPAATGSPVKKQRPLLPKETAPAVQRVVWNSST----VQQKEITQSPSTSTITLVTSTQ 840
+P+ T + RP P + +P Q V +++ +Q Q PS Q
Sbjct: 2344 QSPSQT-----RIRPSTPSQLSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQPQSQPQVQ 2398
Query: 841 SSPLVTSSG---SMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDL 897
SS SSG + T+ S L I V A + + + +++ +
Sbjct: 2399 SSTQTLSSGQTLNQVTVSSPSRPQLQIQQPQPQVIA--VPQLQQQVQVLSQIQSQVVAQI 2456
Query: 898 SKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVK 957
+G +L I+I++ + ++ + ++ E Q ++Q RD+ + +
Sbjct: 2457 QAQQSGVPQQIKLQLPIQIQQSSAVQTHQIQNVVTVQAASVQEQLQRVQQLRDQQQKKKQ 2516
Query: 958 KQLELEKQQAVDETKKKQ 975
+Q+E++++ + + + +
Sbjct: 2517 QQIEIKREHTLQASNQSE 2534
Score = 37.0 bits (84), Expect = 0.11
Identities = 62/259 (23%), Positives = 96/259 (37%), Gaps = 35/259 (13%)
Query: 635 NPVEIKEELKSTSPASEKADPGAVKDKASPEP---EKDFSEKAKPSPH-PIKDKLKGKDE 690
N E K L S+S A G +D P E D ++ PS P + + ++
Sbjct: 1479 NSSETKSHLLSSSDAE-----GNYRDSLETLPSTKESDSTQTTTPSASCPESNSVNQVED 1533
Query: 691 TDSPTVHLG------LDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPS 744
+ T + + S+ ES L D D +G KN+ E K + T +
Sbjct: 1534 MEIETSEVKKVTSSPITSEEESNLSNDF-IDENGLPINKNENVNGESKRKTVITEVTTMT 1592
Query: 745 TTVGSHSPPETPVLT--RSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLP 802
+TV + S V + + +S +T T++T TVT + +TG V
Sbjct: 1593 STVATESKTVIKVEKGDKQTVVSSTENCAKSTVTTTTTTVTKLSTPSTGGSVD------- 1645
Query: 803 KETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADL 862
+ V S TV +T S +T+ TLVTS V+ S V +
Sbjct: 1646 ------IISVKEQSKTVVTTTVTDSLTTTGGTLVTSM----TVSKEYSTRDKVKLMKFSR 1695
Query: 863 PIATASADVAADIAKYTSK 881
P T S K+ +K
Sbjct: 1696 PKKTRSGTALPSYRKFVTK 1714
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 71.2 bits (173), Expect = 5e-12
Identities = 124/605 (20%), Positives = 229/605 (37%), Gaps = 66/605 (10%)
Query: 538 VPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEY 597
+P +S +++S ++ + + E K + + E +E+ E ++ E+ E + E
Sbjct: 429 IPSVSTHIKVKSEEKIKVVEKSE--KETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEE 486
Query: 598 ISDDEQKSKNEPEDTED---KEGCQMDKE-----------PSAVK--KKPKPTNPVEIKE 641
+E++++ E+T+ +E +KE P+ K +K + +P E+K
Sbjct: 487 EGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKS 546
Query: 642 ELKSTSPASEKADPGAVKDKASPE---PEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHL 698
K+ SPA E+A K+ PE PEK+ ++ P K K K+E SP
Sbjct: 547 PEKAKSPAKEEA-------KSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPA--- 596
Query: 699 GLDSDSESELVIDLGEDHSGREGRKN--KKEPKEPSP-KQDVVGKTPPSTTVGSHSPPET 755
++ S + + E+ K+ K+E K P+ K K+P S ++
Sbjct: 597 --EAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKS 654
Query: 756 PVLTRSSAQTSA-----AGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQ 810
P + + A A A + S V A +P SPVK++ K +P +
Sbjct: 655 PEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKE 714
Query: 811 RVVWNSSTVQQ-KEITQSPSTSTITLVTSTQSSPLVTSSGSMSTL-VSSVNADLPIATAS 868
KE ++P + + +S S TL V S A P A
Sbjct: 715 EAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTP---AK 771
Query: 869 ADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRL-RIEIEKLQWLHQQEL 927
+ + K+ K +K + S S + E + EI K + +
Sbjct: 772 EEARSPADKFPEKAKSPVKEEVK------SPEKAKSPLKEDAKAPEKEIPKKEEVKSPVK 825
Query: 928 SEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFY 987
E K E+ + E + E+E+ + +++ + +K++A + K K+ A+
Sbjct: 826 EEEKPQ-EVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVE- 883
Query: 988 CCWNTSYCDYPCQQAHWPEHMKSCTQSATAP-----QQEADAEVNTETLNKSSQGSSSST 1042
++ + K T AP +++A + TE K + +
Sbjct: 884 ---KPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKE 940
Query: 1043 QSAPSETASASKE-KETSAEKSKESGSTLDLSGSRETPSSILLGSNQGSDHSRSNKSSWS 1101
S P+E A+ E K+T EK+K+ + L S + S S
Sbjct: 941 PSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTL--SKEPSKPKAEKAEKSS 998
Query: 1102 SSDEK 1106
S+D+K
Sbjct: 999 STDQK 1003
Score = 48.5 bits (114), Expect = 4e-05
Identities = 70/399 (17%), Positives = 147/399 (36%), Gaps = 39/399 (9%)
Query: 376 PTNPSAGT-AKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSS 434
P PS T K+ +EK+K+ + + +++ + ++ + +
Sbjct: 427 PKIPSVSTHIKVKSEEKIKV-VEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKE 485
Query: 435 VHTGSDVEQDAEKKATSSH-----FSASEESMDFLDKSTASPASTKT---------GQAG 480
G + E + ++ T S S +E+ + + SPA K+ +
Sbjct: 486 EEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVK 545
Query: 481 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPL 540
S + P + +P K+ + S + KA+ KE ++S + +P
Sbjct: 546 SPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVK-SPEKAKSPAKEEAKSPAEAKSPEKA 604
Query: 541 ISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISD 600
SP ++ E K+ + S + + +++ EK+ S + E
Sbjct: 605 KSPVKEEAKSPAEAKSPVKEEAKSPAEVK--SPEKAKSPTKEEAKSPEKAKSPEKE---- 658
Query: 601 DEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVE--IKEELKSTSPASEKADPGAV 658
E KS + + E +K S VK + K + +KEE KS A A
Sbjct: 659 -EAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAK 717
Query: 659 KDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSG 718
+ + P K+ ++ + + P+K++ K ++ SP E +D+ +
Sbjct: 718 SPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSP----------EKAKTLDVKSPEAK 767
Query: 719 REGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPV 757
++ + P + P++ K+P V S ++P+
Sbjct: 768 TPAKEEARSPADKFPEK---AKSPVKEEVKSPEKAKSPL 803
Score = 45.1 bits (105), Expect = 4e-04
Identities = 64/324 (19%), Positives = 123/324 (37%), Gaps = 17/324 (5%)
Query: 426 RSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGS 485
+SP S S +++A+ A + + E++ + + SPA K+
Sbjct: 573 KSPAEVKSPEKAKSPAKEEAKSPAEAK---SPEKAKSPVKEEAKSPAEAKSPVKEEAKSP 629
Query: 486 PKPFSPQLSAPITTKTDKTSTTGSILNLNLDRS--KAEMDLKELSESVQQQSTPVPLISP 543
+ SP+ + T + K+ +S KA+ +K ++S ++ +PV +
Sbjct: 630 AEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAK 689
Query: 544 KRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQ 603
+ K+ E K+ + S + + +++ EK+ S E E+
Sbjct: 690 SPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEK 749
Query: 604 KSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKAS 663
E T D + + + P P + K +K + EKA +D +
Sbjct: 750 AKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKA 809
Query: 664 PE---PEKD-----FSEKAKPSPHPIKDKLKGKDETDSP-TVHLGLDSDSESELVIDLGE 714
PE P+K+ E+ KP +K+ K +E +P T DS+ E + +
Sbjct: 810 PEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKE---EAPK 866
Query: 715 DHSGREGRKNKKEPKEPSPKQDVV 738
+ + + KKEP PK+ V
Sbjct: 867 KEAPKPKVEEKKEPAVEKPKESKV 890
Score = 38.1 bits (87), Expect = 0.048
Identities = 70/322 (21%), Positives = 123/322 (38%), Gaps = 25/322 (7%)
Query: 426 RSPMSTNSSVH----TGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGS 481
+SP S V T + +++A S + S E LD SP + + +
Sbjct: 717 KSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLD--VKSPEAKTPAKEEA 774
Query: 482 LSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSES-VQQQSTP--V 538
S + K F + +P+ + S L + + E+ KE +S V+++ P V
Sbjct: 775 RSPADK-FPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEV 833
Query: 539 PLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYI 598
+ P ++ KT E ++ E VE EK S E
Sbjct: 834 KVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAK 893
Query: 599 SDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAV 658
++ + K P ++ KE + K+K E+ ++ + A E + P A
Sbjct: 894 KEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEK------TEVAKKEPDDAKAKEPSKP-AE 946
Query: 659 KDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSG 718
K +A+PE + EKAK K K + K + D T+ S S+ + E S
Sbjct: 947 KKEAAPEKKDTKEEKAKKPEE--KPKTEAKAKEDDKTL-----SKEPSKPKAEKAEKSSS 999
Query: 719 REGRKNKKEPKEPSPKQDVVGK 740
+ +K+ K P++ + + GK
Sbjct: 1000 TD-QKDSKPPEKATEDKAAKGK 1020
>gi|209977097 tripartite motif-containing 66 [Homo sapiens]
Length = 1216
Score = 70.5 bits (171), Expect = 9e-12
Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 44/259 (16%)
Query: 46 PHSSNGHSPQD---TSTSPIKKKKKPGLLNSNNKEQDGRNDFYCWVCHREGQVLCCELCP 102
P G SP++ +P KK P + N+ +C VC G++LCC+ CP
Sbjct: 939 PPEVEGTSPEEHRLIPRTPGAKKGPPAPIE---------NEDFCAVCLNGGELLCCDRCP 989
Query: 103 RVYHAKC--LRLTSEPEGDWFCPECEKITVAE--------CIE----TQSKAMTMLTIEQ 148
+V+H C L S P G+W C C +T E C S ++M ++
Sbjct: 990 KVFHLSCHVPALLSFPGGEWVCTLCRSLTQPEMEYDCENACYNQPGMRASPGLSMYDQKK 1049
Query: 149 LSYL-LKFAIQKMKQPGTDAFQKPV-PLEQHPDYAEYIFHPMDLCTLEKNAKKK---MYG 203
L L + P F +PV PL +H Y + I PMDL + + +KK Y
Sbjct: 1050 CEKLVLSLCCNNLSLP----FHEPVSPLARH--YYQIIKRPMDLSIIRRKLQKKDPAHYT 1103
Query: 204 CTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDN 263
E ++D + + NC +N + ++ + + + E + EI PE A ++ D+
Sbjct: 1104 TPEEVVSDVRLMFWNCAKFNYPDSEVAEAGRCLEVFFEGWLKEI--YPEKRFAQPRQEDS 1161
Query: 264 WFCE-----PCSNPHPLVW 277
E CS P W
Sbjct: 1162 DSEEVSSESGCSTPQGFPW 1180
Score = 30.4 bits (67), Expect = 10.0
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
Query: 464 LDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTT----GSILNLNLDRSK 519
LDK+TA+ +G+ LS P + Q S+P + TS + + L + L ++
Sbjct: 588 LDKNTAAALPQASGEETPLSVPPVDSTIQHSSPNVVRKHSTSLSIMGFSNTLEMELSSTR 647
Query: 520 AEMDLKELSESVQQ------QSTPVPLISPKRQIRS 549
E L+ +SV Q+ P L +P + + S
Sbjct: 648 LERPLEPQIQSVSNLTAGAPQAVPSLLSAPPKMVSS 683
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 68.9 bits (167), Expect = 3e-11
Identities = 101/466 (21%), Positives = 166/466 (35%), Gaps = 41/466 (8%)
Query: 361 RTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRIS 420
R+P PN + T + +I ++ V N + ++S S S T R+I
Sbjct: 94 RSPKPPNKK------KTKKVIESEEITEEHSVSENQESSSS-----SSSSSSSSTIRKIK 142
Query: 421 LSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASE--ESMDFLDKSTASPASTKTGQ 478
S + + + + +KK T E +D D +P T T Q
Sbjct: 143 SSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTP-DTSTTQ 201
Query: 479 AGSLSGSPK-----PFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQ 533
+S SPK P +P+ S P + T K ++ ++ + K+ S ++
Sbjct: 202 HNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKE 261
Query: 534 QSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSS 593
++T + ++ K + + + T E + + E + ++
Sbjct: 262 KTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTT 321
Query: 594 DSEYISDDEQKSKN---EPEDTEDKEGCQMDKEPS-AVKKKPKPTNPVE-IKEELKSTSP 648
E + + EP T K KEP+ K+P PT P E K +P
Sbjct: 322 PKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP 381
Query: 649 ASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESEL 708
+ K+ P K+ A P+K P+P K+ + +PT ++
Sbjct: 382 TTTKSAPTTPKEPAPTTPKK-------PAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPA 434
Query: 709 VIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSP--PETPV-LTRSSAQT 765
E + PKEP+P K P TT SP P+ P T SA T
Sbjct: 435 PTTPKEPAPTAPKKPAPTTPKEPAP---TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPT 491
Query: 766 SAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQR 811
+ TT+ S+ T P+P T P P PKE AP +
Sbjct: 492 TTKEPAPTTTKSAPTTPKEPSPTTTKEPA----PTTPKEPAPTTPK 533
Score = 59.7 bits (143), Expect = 2e-08
Identities = 85/400 (21%), Positives = 134/400 (33%), Gaps = 73/400 (18%)
Query: 466 KSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLK 525
K T P +G +G K +P S TT+ +K ST+ I
Sbjct: 170 KPTPKPPVVDEAGSGLDNGDFKVTTPDTS---TTQHNKVSTSPKI--------------- 211
Query: 526 ELSESVQQQSTPVPLISPKRQIRSRFQLNLDK--TIESCKAQLGINEISED-VYTAVEHS 582
+ + P P + P L ++K T+E+ + + S D
Sbjct: 212 ----TTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAK 267
Query: 583 DSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPS-AVKKKPKPTNPVEIKE 641
+++ EK+ + D S K + E T KEP+ K+P T P E
Sbjct: 268 ETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTP 327
Query: 642 ELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLD 701
++P + K +P K++P K+ P+P K+ + +PT
Sbjct: 328 TTIKSAPTTPK-EPAPTTTKSAPTTPKE------PAPTTTKEPAPTTPKEPAPTT----- 375
Query: 702 SDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRS 761
KEP+P T P + P +
Sbjct: 376 --------------------------TKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 409
Query: 762 SAQTSAAGATATTSTSSTVTVTAPAPAATGSPV----KKQRPLLPKETAPAVQRVVWNSS 817
A T+ T TT T PAP P KK P PKE AP + ++
Sbjct: 410 PAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTT 469
Query: 818 TVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSS 857
T + SP+T T+T+S+P T + +T S+
Sbjct: 470 TKE-----PSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSA 504
Score = 53.9 bits (128), Expect = 8e-07
Identities = 66/283 (23%), Positives = 102/283 (36%), Gaps = 38/283 (13%)
Query: 608 EPEDTEDKEGCQMDKEPSA--VKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPE 665
EP T KE + +A K+P PT P K K +P + K DK +P
Sbjct: 723 EPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK--KPAPKELAPTTTKGPTSTTSDKPAPT 780
Query: 666 PEKDFSEKAKPSPHPIKDKLKGKDETDSP---TVHLGLDSDSESELVIDLGEDHSGRE-G 721
K+ + P P K ++P T + + ++ I D S E
Sbjct: 781 TPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELS 840
Query: 722 RKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVT 781
+ + E SPK+ V T +TP T+ T+A T +T
Sbjct: 841 AEPTPKALENSPKEPGVPTT------------KTPAATKPEMTTTAKDKTTERDLRTTPE 888
Query: 782 VTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTST----ITLVT 837
T AP T KETA ++ + T ++T + + T IT +
Sbjct: 889 TTTAAPKMT------------KETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLK 936
Query: 838 STQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTS 880
+T +P VT++ T +N P TA A +K T+
Sbjct: 937 TTTLAPKVTTTKKTITTTEIMNK--PEETAKPKDRATNSKATT 977
Score = 52.4 bits (124), Expect = 2e-06
Identities = 97/434 (22%), Positives = 151/434 (34%), Gaps = 53/434 (12%)
Query: 467 STASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKE 526
+T PA T T A + P P + + AP T K + TT + A KE
Sbjct: 492 TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPK-EPAPTTPKKPAPTTPKEPAPTTPKE 550
Query: 527 LSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSED 586
+ + ++ P +PK + + +T + +L + T E
Sbjct: 551 PAPTTTKKPAPT---TPKEPAPTTPK----ETAPTTPKKLTPTTPEKLAPTTPEKPAPTT 603
Query: 587 SEKSDSSDSEYISDDEQKSKNEPEDTEDKEGC-QMDKEPS-AVKKKPKPTNPVEIKEEL- 643
E+ + E + + EP T K KEP+ K+P PT P E
Sbjct: 604 PEELAPTTPE---EPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP 660
Query: 644 KSTSPASEKAD-PGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDS 702
K T+P + K P +K+ A P+K ++ P+ K+ + +PT G
Sbjct: 661 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTT--TKEPTSTTCDKPAPTTPKGTAP 718
Query: 703 DSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSS 762
+ PKEP+P K P TT +P ++
Sbjct: 719 TT-----------------------PKEPAP---TTPKEPAPTTPKGTAPTTLKEPAPTT 752
Query: 763 AQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQK 822
+ A A T+T + T+ PA T K+ P PKE AP +
Sbjct: 753 PKKPAPKELAPTTTKGPTSTTSDKPAPT--TPKETAPTTPKEPAPTTPK-----KPAPTT 805
Query: 823 EITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKM 882
T P+TS ++ T+T+ + S ST S P A + + T+K
Sbjct: 806 PETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAE---PTPKALENSPKEPGVPTTKT 862
Query: 883 MDAIKGTMTEIYND 896
A K MT D
Sbjct: 863 PAATKPEMTTTAKD 876
Score = 48.5 bits (114), Expect = 4e-05
Identities = 73/391 (18%), Positives = 142/391 (36%), Gaps = 80/391 (20%)
Query: 446 EKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTS 505
++ ++SS S+S ++ + S S A+ + + + + K + + P D+
Sbjct: 123 QESSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAG 182
Query: 506 TTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQ 565
+ LD ++ + S + + + P I+ + I R L +
Sbjct: 183 S-------GLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPN--------- 226
Query: 566 LGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEP- 624
++ S++ V + +++++ +++ + +D ++K+ + E ++ D P
Sbjct: 227 ---SDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPT 283
Query: 625 SAVKKKPKPTNPVEIKEELKSTSPA---SEKADPGAVKDKASPEPEKDFSEKAKPSPHPI 681
S V KP P K E + PA ++ P K+ AS P++ P+P I
Sbjct: 284 SKVLAKPTP------KAETTTKGPALTTPKEPTPTTPKEPASTTPKE-------PTPTTI 330
Query: 682 KDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKT 741
K +PT PKEP+P T
Sbjct: 331 KS---------APTT-------------------------------PKEPAPTTTKSAPT 350
Query: 742 PPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLL 801
P + + P + A T+ TT+ S+ T PAP KK P
Sbjct: 351 TPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTP----KKPAPTT 406
Query: 802 PKETAPAVQRVVWNSSTVQQKEITQSPSTST 832
PKE AP + ++ + T+ P+ +T
Sbjct: 407 PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 437
Score = 47.0 bits (110), Expect = 1e-04
Identities = 106/547 (19%), Positives = 172/547 (31%), Gaps = 77/547 (14%)
Query: 362 TPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISL 421
T T + Q D + + EK D+ + K+L +KP T +
Sbjct: 245 TKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAK-DLAPTSKVL-AKPTPKAETTTKGPA 302
Query: 422 SDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGS 481
P+ P T + ++ S+ + E + +T S +T A +
Sbjct: 303 LTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPA----PTTTKSAPTTPKEPAPT 358
Query: 482 LSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLD------RSKAEMDLKELSESVQQQS 535
+ P P +P+ AP TTK +TT S + + A KE + + ++
Sbjct: 359 TTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 418
Query: 536 TPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEH----SDSEDSEKSD 591
TP P + + + + E T + + E S +
Sbjct: 419 TPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTP 478
Query: 592 SSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPS-AVKKKPKPTNPVE------------ 638
+ + + EP T K KEPS K+P PT P E
Sbjct: 479 KEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 538
Query: 639 IKEELKSTSP------ASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKD-ET 691
+E T+P ++K P K+ A P++ K +KL E
Sbjct: 539 TPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEK 598
Query: 692 DSPTVHLGLDSDSESELVIDLGEDHSGREGR----KNKKEPKEPSPKQDVVG-------- 739
+PT L + E E+ + + KEP +PK+
Sbjct: 599 PAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 658
Query: 740 ------------------KTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVT 781
K P TT +P E T ++ A T+ T
Sbjct: 659 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAP 718
Query: 782 VTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQS 841
T PA T K+ P PK TAP +T+++ T + L +T
Sbjct: 719 TTPKEPAPT--TPKEPAPTTPKGTAP---------TTLKEPAPTTPKKPAPKELAPTTTK 767
Query: 842 SPLVTSS 848
P T+S
Sbjct: 768 GPTSTTS 774
Score = 42.0 bits (97), Expect = 0.003
Identities = 60/265 (22%), Positives = 101/265 (38%), Gaps = 36/265 (13%)
Query: 624 PSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKD 683
P + KK P P+ + +KST+ S K P K K E E + +E+ S + ++
Sbjct: 72 PPSSKKAPPPSGA---SQTIKSTTKRSPKP-PNKKKTKKVIESE-EITEEHSVSEN--QE 124
Query: 684 KLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPP 743
+ S + + S S +L + ++ +KN+ + K+P+PK VV +
Sbjct: 125 SSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTK-KKPTPKPPVVDEAGS 183
Query: 744 STTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPK 803
G T TST+ V+ T P+ RP LP
Sbjct: 184 GLDNGDFKV-----------------TTPDTSTTQHNKVSTSPKITTAKPINP-RPSLPP 225
Query: 804 ETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLP 863
+ + + S TV ++ ++ T+T TST TS+ ++ + DL
Sbjct: 226 NSDTSKE----TSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDL- 280
Query: 864 IATASADVAADIAKYTSKMMDAIKG 888
A + +AK T K KG
Sbjct: 281 -----APTSKVLAKPTPKAETTTKG 300
Score = 38.1 bits (87), Expect = 0.048
Identities = 55/254 (21%), Positives = 91/254 (35%), Gaps = 36/254 (14%)
Query: 425 PRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSG 484
P +P T S V T + K+ T+ H S E + + +A P + G
Sbjct: 806 PETPPPTTSEVSTPTTT-----KEPTTIHKSPDESTPEL----SAEPTPKALENSPKEPG 856
Query: 485 SPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPK 544
P +P + P T T K TT L + + A + + + + +++T + +
Sbjct: 857 VPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATT 916
Query: 545 RQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQK 604
Q+ S T L ++ V T K + +E +
Sbjct: 917 TQVTS---TTTQDTTPFKITTLKTTTLAPKVTTT----------KKTITTTEIM------ 957
Query: 605 SKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASP 664
N+PE+T + D+ ++ PKP P K K TS K P K K +P
Sbjct: 958 --NKPEETAKPK----DRATNSKATTPKPQKPT--KAPKKPTSTKKPKTMPRVRKPKTTP 1009
Query: 665 EPEKDFSEKAKPSP 678
P K S + +P
Sbjct: 1010 TPRKMTSTMPELNP 1023
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 68.9 bits (167), Expect = 3e-11
Identities = 101/466 (21%), Positives = 166/466 (35%), Gaps = 41/466 (8%)
Query: 361 RTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRIS 420
R+P PN + T + +I ++ V N + ++S S S T R+I
Sbjct: 135 RSPKPPNKK------KTKKVIESEEITEEHSVSENQESSSS-----SSSSSSSSTIRKIK 183
Query: 421 LSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASE--ESMDFLDKSTASPASTKTGQ 478
S + + + + +KK T E +D D +P T T Q
Sbjct: 184 SSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTP-DTSTTQ 242
Query: 479 AGSLSGSPK-----PFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQ 533
+S SPK P +P+ S P + T K ++ ++ + K+ S ++
Sbjct: 243 HNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKE 302
Query: 534 QSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSS 593
++T + ++ K + + + T E + + E + ++
Sbjct: 303 KTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTT 362
Query: 594 DSEYISDDEQKSKN---EPEDTEDKEGCQMDKEPS-AVKKKPKPTNPVE-IKEELKSTSP 648
E + + EP T K KEP+ K+P PT P E K +P
Sbjct: 363 PKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP 422
Query: 649 ASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESEL 708
+ K+ P K+ A P+K P+P K+ + +PT ++
Sbjct: 423 TTTKSAPTTPKEPAPTTPKK-------PAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPA 475
Query: 709 VIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSP--PETPV-LTRSSAQT 765
E + PKEP+P K P TT SP P+ P T SA T
Sbjct: 476 PTTPKEPAPTAPKKPAPTTPKEPAP---TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPT 532
Query: 766 SAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQR 811
+ TT+ S+ T P+P T P P PKE AP +
Sbjct: 533 TTKEPAPTTTKSAPTTPKEPSPTTTKEPA----PTTPKEPAPTTPK 574
Score = 59.7 bits (143), Expect = 2e-08
Identities = 85/400 (21%), Positives = 134/400 (33%), Gaps = 73/400 (18%)
Query: 466 KSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLK 525
K T P +G +G K +P S TT+ +K ST+ I
Sbjct: 211 KPTPKPPVVDEAGSGLDNGDFKVTTPDTS---TTQHNKVSTSPKI--------------- 252
Query: 526 ELSESVQQQSTPVPLISPKRQIRSRFQLNLDK--TIESCKAQLGINEISED-VYTAVEHS 582
+ + P P + P L ++K T+E+ + + S D
Sbjct: 253 ----TTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAK 308
Query: 583 DSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPS-AVKKKPKPTNPVEIKE 641
+++ EK+ + D S K + E T KEP+ K+P T P E
Sbjct: 309 ETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTP 368
Query: 642 ELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLD 701
++P + K +P K++P K+ P+P K+ + +PT
Sbjct: 369 TTIKSAPTTPK-EPAPTTTKSAPTTPKE------PAPTTTKEPAPTTPKEPAPTT----- 416
Query: 702 SDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRS 761
KEP+P T P + P +
Sbjct: 417 --------------------------TKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 450
Query: 762 SAQTSAAGATATTSTSSTVTVTAPAPAATGSPV----KKQRPLLPKETAPAVQRVVWNSS 817
A T+ T TT T PAP P KK P PKE AP + ++
Sbjct: 451 PAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTT 510
Query: 818 TVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSS 857
T + SP+T T+T+S+P T + +T S+
Sbjct: 511 TKE-----PSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSA 545
Score = 53.9 bits (128), Expect = 8e-07
Identities = 66/283 (23%), Positives = 102/283 (36%), Gaps = 38/283 (13%)
Query: 608 EPEDTEDKEGCQMDKEPSA--VKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPE 665
EP T KE + +A K+P PT P K K +P + K DK +P
Sbjct: 764 EPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK--KPAPKELAPTTTKGPTSTTSDKPAPT 821
Query: 666 PEKDFSEKAKPSPHPIKDKLKGKDETDSP---TVHLGLDSDSESELVIDLGEDHSGRE-G 721
K+ + P P K ++P T + + ++ I D S E
Sbjct: 822 TPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELS 881
Query: 722 RKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVT 781
+ + E SPK+ V T +TP T+ T+A T +T
Sbjct: 882 AEPTPKALENSPKEPGVPTT------------KTPAATKPEMTTTAKDKTTERDLRTTPE 929
Query: 782 VTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTST----ITLVT 837
T AP T KETA ++ + T ++T + + T IT +
Sbjct: 930 TTTAAPKMT------------KETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLK 977
Query: 838 STQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTS 880
+T +P VT++ T +N P TA A +K T+
Sbjct: 978 TTTLAPKVTTTKKTITTTEIMNK--PEETAKPKDRATNSKATT 1018
Score = 52.4 bits (124), Expect = 2e-06
Identities = 97/434 (22%), Positives = 151/434 (34%), Gaps = 53/434 (12%)
Query: 467 STASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKE 526
+T PA T T A + P P + + AP T K + TT + A KE
Sbjct: 533 TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPK-EPAPTTPKKPAPTTPKEPAPTTPKE 591
Query: 527 LSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSED 586
+ + ++ P +PK + + +T + +L + T E
Sbjct: 592 PAPTTTKKPAPT---TPKEPAPTTPK----ETAPTTPKKLTPTTPEKLAPTTPEKPAPTT 644
Query: 587 SEKSDSSDSEYISDDEQKSKNEPEDTEDKEGC-QMDKEPS-AVKKKPKPTNPVEIKEEL- 643
E+ + E + + EP T K KEP+ K+P PT P E
Sbjct: 645 PEELAPTTPE---EPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP 701
Query: 644 KSTSPASEKAD-PGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDS 702
K T+P + K P +K+ A P+K ++ P+ K+ + +PT G
Sbjct: 702 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTT--TKEPTSTTCDKPAPTTPKGTAP 759
Query: 703 DSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSS 762
+ PKEP+P K P TT +P ++
Sbjct: 760 TT-----------------------PKEPAP---TTPKEPAPTTPKGTAPTTLKEPAPTT 793
Query: 763 AQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQK 822
+ A A T+T + T+ PA T K+ P PKE AP +
Sbjct: 794 PKKPAPKELAPTTTKGPTSTTSDKPAPT--TPKETAPTTPKEPAPTTPK-----KPAPTT 846
Query: 823 EITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKM 882
T P+TS ++ T+T+ + S ST S P A + + T+K
Sbjct: 847 PETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAE---PTPKALENSPKEPGVPTTKT 903
Query: 883 MDAIKGTMTEIYND 896
A K MT D
Sbjct: 904 PAATKPEMTTTAKD 917
Score = 48.5 bits (114), Expect = 4e-05
Identities = 73/391 (18%), Positives = 142/391 (36%), Gaps = 80/391 (20%)
Query: 446 EKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTS 505
++ ++SS S+S ++ + S S A+ + + + + K + + P D+
Sbjct: 164 QESSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAG 223
Query: 506 TTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQ 565
+ LD ++ + S + + + P I+ + I R L +
Sbjct: 224 S-------GLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPN--------- 267
Query: 566 LGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEP- 624
++ S++ V + +++++ +++ + +D ++K+ + E ++ D P
Sbjct: 268 ---SDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPT 324
Query: 625 SAVKKKPKPTNPVEIKEELKSTSPA---SEKADPGAVKDKASPEPEKDFSEKAKPSPHPI 681
S V KP P K E + PA ++ P K+ AS P++ P+P I
Sbjct: 325 SKVLAKPTP------KAETTTKGPALTTPKEPTPTTPKEPASTTPKE-------PTPTTI 371
Query: 682 KDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKT 741
K +PT PKEP+P T
Sbjct: 372 KS---------APTT-------------------------------PKEPAPTTTKSAPT 391
Query: 742 PPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLL 801
P + + P + A T+ TT+ S+ T PAP KK P
Sbjct: 392 TPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTP----KKPAPTT 447
Query: 802 PKETAPAVQRVVWNSSTVQQKEITQSPSTST 832
PKE AP + ++ + T+ P+ +T
Sbjct: 448 PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTT 478
Score = 47.0 bits (110), Expect = 1e-04
Identities = 106/547 (19%), Positives = 172/547 (31%), Gaps = 77/547 (14%)
Query: 362 TPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISL 421
T T + Q D + + EK D+ + K+L +KP T +
Sbjct: 286 TKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAK-DLAPTSKVL-AKPTPKAETTTKGPA 343
Query: 422 SDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGS 481
P+ P T + ++ S+ + E + +T S +T A +
Sbjct: 344 LTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPA----PTTTKSAPTTPKEPAPT 399
Query: 482 LSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLD------RSKAEMDLKELSESVQQQS 535
+ P P +P+ AP TTK +TT S + + A KE + + ++
Sbjct: 400 TTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 459
Query: 536 TPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEH----SDSEDSEKSD 591
TP P + + + + E T + + E S +
Sbjct: 460 TPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTP 519
Query: 592 SSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPS-AVKKKPKPTNPVE------------ 638
+ + + EP T K KEPS K+P PT P E
Sbjct: 520 KEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 579
Query: 639 IKEELKSTSP------ASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKD-ET 691
+E T+P ++K P K+ A P++ K +KL E
Sbjct: 580 TPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEK 639
Query: 692 DSPTVHLGLDSDSESELVIDLGEDHSGREGR----KNKKEPKEPSPKQDVVG-------- 739
+PT L + E E+ + + KEP +PK+
Sbjct: 640 PAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 699
Query: 740 ------------------KTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVT 781
K P TT +P E T ++ A T+ T
Sbjct: 700 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAP 759
Query: 782 VTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQS 841
T PA T K+ P PK TAP +T+++ T + L +T
Sbjct: 760 TTPKEPAPT--TPKEPAPTTPKGTAP---------TTLKEPAPTTPKKPAPKELAPTTTK 808
Query: 842 SPLVTSS 848
P T+S
Sbjct: 809 GPTSTTS 815
Score = 42.0 bits (97), Expect = 0.003
Identities = 60/265 (22%), Positives = 101/265 (38%), Gaps = 36/265 (13%)
Query: 624 PSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKD 683
P + KK P P+ + +KST+ S K P K K E E + +E+ S + ++
Sbjct: 113 PPSSKKAPPPSGA---SQTIKSTTKRSPKP-PNKKKTKKVIESE-EITEEHSVSEN--QE 165
Query: 684 KLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPP 743
+ S + + S S +L + ++ +KN+ + K+P+PK VV +
Sbjct: 166 SSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTK-KKPTPKPPVVDEAGS 224
Query: 744 STTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPK 803
G T TST+ V+ T P+ RP LP
Sbjct: 225 GLDNGDFKV-----------------TTPDTSTTQHNKVSTSPKITTAKPINP-RPSLPP 266
Query: 804 ETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLP 863
+ + + S TV ++ ++ T+T TST TS+ ++ + DL
Sbjct: 267 NSDTSKE----TSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDL- 321
Query: 864 IATASADVAADIAKYTSKMMDAIKG 888
A + +AK T K KG
Sbjct: 322 -----APTSKVLAKPTPKAETTTKG 341
Score = 38.1 bits (87), Expect = 0.048
Identities = 55/254 (21%), Positives = 91/254 (35%), Gaps = 36/254 (14%)
Query: 425 PRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSG 484
P +P T S V T + K+ T+ H S E + + +A P + G
Sbjct: 847 PETPPPTTSEVSTPTTT-----KEPTTIHKSPDESTPEL----SAEPTPKALENSPKEPG 897
Query: 485 SPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPK 544
P +P + P T T K TT L + + A + + + + +++T + +
Sbjct: 898 VPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATT 957
Query: 545 RQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQK 604
Q+ S T L ++ V T K + +E +
Sbjct: 958 TQVTS---TTTQDTTPFKITTLKTTTLAPKVTTT----------KKTITTTEIM------ 998
Query: 605 SKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASP 664
N+PE+T + D+ ++ PKP P K K TS K P K K +P
Sbjct: 999 --NKPEETAKPK----DRATNSKATTPKPQKPT--KAPKKPTSTKKPKTMPRVRKPKTTP 1050
Query: 665 EPEKDFSEKAKPSP 678
P K S + +P
Sbjct: 1051 TPRKMTSTMPELNP 1064
>gi|20357588 TBP-associated factor 1 isoform 2 [Homo sapiens]
Length = 1872
Score = 68.2 bits (165), Expect = 4e-11
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 149 LSYLLKFAIQKMKQ-PGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEA 207
LS +L+ I M+ P T F PV + DY + I PMDL TL +N +K++Y E
Sbjct: 1385 LSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREE 1444
Query: 208 FLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIE 248
F + I+ N YNG H LTQI++ ++ +C+ ++ E E
Sbjct: 1445 FREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1485
Score = 62.4 bits (150), Expect = 2e-09
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 160 MKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNC 219
M P + F PV + PDY + I +PMDL T+ KN K Y E+FL D IL N
Sbjct: 1520 MAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANS 1579
Query: 220 IIYNGGNHKLTQIAKVVIKICEHEMNEIE 248
+ YNG + T+ A+ ++ +C + E +
Sbjct: 1580 VKYNGPESQYTKTAQEIVNVCYQTLTEYD 1608
>gi|20357585 TBP-associated factor 1 isoform 1 [Homo sapiens]
Length = 1893
Score = 68.2 bits (165), Expect = 4e-11
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 149 LSYLLKFAIQKMKQ-PGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEA 207
LS +L+ I M+ P T F PV + DY + I PMDL TL +N +K++Y E
Sbjct: 1406 LSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREE 1465
Query: 208 FLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIE 248
F + I+ N YNG H LTQI++ ++ +C+ ++ E E
Sbjct: 1466 FREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1506
Score = 62.4 bits (150), Expect = 2e-09
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 160 MKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNC 219
M P + F PV + PDY + I +PMDL T+ KN K Y E+FL D IL N
Sbjct: 1541 MAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANS 1600
Query: 220 IIYNGGNHKLTQIAKVVIKICEHEMNEIE 248
+ YNG + T+ A+ ++ +C + E +
Sbjct: 1601 VKYNGPESQYTKTAQEIVNVCYQTLTEYD 1629
>gi|24429572 TBP-associated factor RNA polymerase 1-like [Homo
sapiens]
Length = 1826
Score = 67.0 bits (162), Expect = 1e-10
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 149 LSYLLKFAIQKMKQ-PGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEA 207
LS +L+ I M+ P T F PV + DY + I PMDL TL +N +K +Y E
Sbjct: 1404 LSSILESIINDMRDLPNTHPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKCLYPSREE 1463
Query: 208 FLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIE 248
F + I+ N YNG H LTQI++ ++ +C+ ++ E E
Sbjct: 1464 FREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKE 1504
Score = 60.8 bits (146), Expect = 7e-09
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 160 MKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNC 219
M P + F PV + PDY + I +P+DL T+ KN K Y E+FL D IL N
Sbjct: 1539 MAVPDSWPFHHPVNKKFVPDYYKMIVNPVDLETIRKNISKHKYQSRESFLDDVNLILANS 1598
Query: 220 IIYNGGNHKLTQIAKVVIKICEHEMNEIE 248
+ YNG + T+ A+ ++ IC + E +
Sbjct: 1599 VKYNGPESQYTKTAQEIVNICYQTITEYD 1627
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 65.5 bits (158), Expect = 3e-10
Identities = 85/387 (21%), Positives = 140/387 (36%), Gaps = 29/387 (7%)
Query: 440 DVEQDAEKKATSSHFSASEESMDFLDKST--ASPASTKTGQAGSLSGSPK-----PFSPQ 492
D +++ KK + +E+ LD + T T Q +S SPK P +P+
Sbjct: 68 DNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPR 127
Query: 493 LSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQ 552
S P + T K ++ ++ + K+ S ++++T + ++
Sbjct: 128 PSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDL 187
Query: 553 LNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKN---EP 609
K + + + T E + + E + ++ E + + EP
Sbjct: 188 APTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEP 247
Query: 610 EDTEDKEGCQMDKEPS-AVKKKPKPTNPVE-IKEELKSTSPASEKADPGAVKDKASPEPE 667
T K KEP+ K+P PT P E K +P + K+ P K+ A P+
Sbjct: 248 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPK 307
Query: 668 KDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKE 727
K P+P K+ + +PT ++ E +
Sbjct: 308 K-------PAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTT 360
Query: 728 PKEPSPKQDVVGKTPPSTTVGSHSP--PETPV-LTRSSAQTSAAGATATTSTSSTVTVTA 784
PKEP+P K P TT SP P+ P T SA T+ TT+ S+ T
Sbjct: 361 PKEPAP---TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 417
Query: 785 PAPAATGSPVKKQRPLLPKETAPAVQR 811
P+P T P P PKE AP +
Sbjct: 418 PSPTTTKEPA----PTTPKEPAPTTPK 440
Score = 59.7 bits (143), Expect = 2e-08
Identities = 85/400 (21%), Positives = 134/400 (33%), Gaps = 73/400 (18%)
Query: 466 KSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLK 525
K T P +G +G K +P S TT+ +K ST+ I
Sbjct: 77 KPTPKPPVVDEAGSGLDNGDFKVTTPDTS---TTQHNKVSTSPKI--------------- 118
Query: 526 ELSESVQQQSTPVPLISPKRQIRSRFQLNLDK--TIESCKAQLGINEISED-VYTAVEHS 582
+ + P P + P L ++K T+E+ + + S D
Sbjct: 119 ----TTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAK 174
Query: 583 DSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPS-AVKKKPKPTNPVEIKE 641
+++ EK+ + D S K + E T KEP+ K+P T P E
Sbjct: 175 ETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTP 234
Query: 642 ELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLD 701
++P + K +P K++P K+ P+P K+ + +PT
Sbjct: 235 TTIKSAPTTPK-EPAPTTTKSAPTTPKE------PAPTTTKEPAPTTPKEPAPTT----- 282
Query: 702 SDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRS 761
KEP+P T P + P +
Sbjct: 283 --------------------------TKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 316
Query: 762 SAQTSAAGATATTSTSSTVTVTAPAPAATGSPV----KKQRPLLPKETAPAVQRVVWNSS 817
A T+ T TT T PAP P KK P PKE AP + ++
Sbjct: 317 PAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTT 376
Query: 818 TVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSS 857
T + SP+T T+T+S+P T + +T S+
Sbjct: 377 TKE-----PSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSA 411
Score = 53.9 bits (128), Expect = 8e-07
Identities = 66/283 (23%), Positives = 102/283 (36%), Gaps = 38/283 (13%)
Query: 608 EPEDTEDKEGCQMDKEPSA--VKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPE 665
EP T KE + +A K+P PT P K K +P + K DK +P
Sbjct: 630 EPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK--KPAPKELAPTTTKGPTSTTSDKPAPT 687
Query: 666 PEKDFSEKAKPSPHPIKDKLKGKDETDSP---TVHLGLDSDSESELVIDLGEDHSGRE-G 721
K+ + P P K ++P T + + ++ I D S E
Sbjct: 688 TPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELS 747
Query: 722 RKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVT 781
+ + E SPK+ V T +TP T+ T+A T +T
Sbjct: 748 AEPTPKALENSPKEPGVPTT------------KTPAATKPEMTTTAKDKTTERDLRTTPE 795
Query: 782 VTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTST----ITLVT 837
T AP T KETA ++ + T ++T + + T IT +
Sbjct: 796 TTTAAPKMT------------KETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLK 843
Query: 838 STQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTS 880
+T +P VT++ T +N P TA A +K T+
Sbjct: 844 TTTLAPKVTTTKKTITTTEIMNK--PEETAKPKDRATNSKATT 884
Score = 52.4 bits (124), Expect = 2e-06
Identities = 97/434 (22%), Positives = 151/434 (34%), Gaps = 53/434 (12%)
Query: 467 STASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKE 526
+T PA T T A + P P + + AP T K + TT + A KE
Sbjct: 399 TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPK-EPAPTTPKKPAPTTPKEPAPTTPKE 457
Query: 527 LSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSED 586
+ + ++ P +PK + + +T + +L + T E
Sbjct: 458 PAPTTTKKPAPT---TPKEPAPTTPK----ETAPTTPKKLTPTTPEKLAPTTPEKPAPTT 510
Query: 587 SEKSDSSDSEYISDDEQKSKNEPEDTEDKEGC-QMDKEPS-AVKKKPKPTNPVEIKEEL- 643
E+ + E + + EP T K KEP+ K+P PT P E
Sbjct: 511 PEELAPTTPE---EPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP 567
Query: 644 KSTSPASEKAD-PGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDS 702
K T+P + K P +K+ A P+K ++ P+ K+ + +PT G
Sbjct: 568 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTT--TKEPTSTTCDKPAPTTPKGTAP 625
Query: 703 DSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSS 762
+ PKEP+P K P TT +P ++
Sbjct: 626 TT-----------------------PKEPAP---TTPKEPAPTTPKGTAPTTLKEPAPTT 659
Query: 763 AQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQK 822
+ A A T+T + T+ PA T K+ P PKE AP +
Sbjct: 660 PKKPAPKELAPTTTKGPTSTTSDKPAPT--TPKETAPTTPKEPAPTTPK-----KPAPTT 712
Query: 823 EITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKM 882
T P+TS ++ T+T+ + S ST S P A + + T+K
Sbjct: 713 PETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAE---PTPKALENSPKEPGVPTTKT 769
Query: 883 MDAIKGTMTEIYND 896
A K MT D
Sbjct: 770 PAATKPEMTTTAKD 783
Score = 47.0 bits (110), Expect = 1e-04
Identities = 106/547 (19%), Positives = 172/547 (31%), Gaps = 77/547 (14%)
Query: 362 TPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISL 421
T T + Q D + + EK D+ + K+L +KP T +
Sbjct: 152 TKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAK-DLAPTSKVL-AKPTPKAETTTKGPA 209
Query: 422 SDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGS 481
P+ P T + ++ S+ + E + +T S +T A +
Sbjct: 210 LTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPA----PTTTKSAPTTPKEPAPT 265
Query: 482 LSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLD------RSKAEMDLKELSESVQQQS 535
+ P P +P+ AP TTK +TT S + + A KE + + ++
Sbjct: 266 TTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 325
Query: 536 TPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEH----SDSEDSEKSD 591
TP P + + + + E T + + E S +
Sbjct: 326 TPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTP 385
Query: 592 SSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPS-AVKKKPKPTNPVE------------ 638
+ + + EP T K KEPS K+P PT P E
Sbjct: 386 KEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 445
Query: 639 IKEELKSTSP------ASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKD-ET 691
+E T+P ++K P K+ A P++ K +KL E
Sbjct: 446 TPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEK 505
Query: 692 DSPTVHLGLDSDSESELVIDLGEDHSGREGR----KNKKEPKEPSPKQDVVG-------- 739
+PT L + E E+ + + KEP +PK+
Sbjct: 506 PAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 565
Query: 740 ------------------KTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVT 781
K P TT +P E T ++ A T+ T
Sbjct: 566 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAP 625
Query: 782 VTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQS 841
T PA T K+ P PK TAP +T+++ T + L +T
Sbjct: 626 TTPKEPAPT--TPKEPAPTTPKGTAP---------TTLKEPAPTTPKKPAPKELAPTTTK 674
Query: 842 SPLVTSS 848
P T+S
Sbjct: 675 GPTSTTS 681
Score = 38.1 bits (87), Expect = 0.048
Identities = 55/254 (21%), Positives = 91/254 (35%), Gaps = 36/254 (14%)
Query: 425 PRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSG 484
P +P T S V T + K+ T+ H S E + + +A P + G
Sbjct: 713 PETPPPTTSEVSTPTTT-----KEPTTIHKSPDESTPEL----SAEPTPKALENSPKEPG 763
Query: 485 SPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPK 544
P +P + P T T K TT L + + A + + + + +++T + +
Sbjct: 764 VPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATT 823
Query: 545 RQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQK 604
Q+ S T L ++ V T K + +E +
Sbjct: 824 TQVTS---TTTQDTTPFKITTLKTTTLAPKVTTT----------KKTITTTEIM------ 864
Query: 605 SKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASP 664
N+PE+T + D+ ++ PKP P K K TS K P K K +P
Sbjct: 865 --NKPEETAKPK----DRATNSKATTPKPQKPT--KAPKKPTSTKKPKTMPRVRKPKTTP 916
Query: 665 EPEKDFSEKAKPSP 678
P K S + +P
Sbjct: 917 TPRKMTSTMPELNP 930
Score = 33.5 bits (75), Expect = 1.2
Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 29/170 (17%)
Query: 719 REGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSS 778
++ +KN+ + K+P+PK VV + G T TST+
Sbjct: 67 KDNKKNRTK-KKPTPKPPVVDEAGSGLDNGDFKV-----------------TTPDTSTTQ 108
Query: 779 TVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTS 838
V+ T P+ RP LP + + + S TV ++ ++ T+T TS
Sbjct: 109 HNKVSTSPKITTAKPINP-RPSLPPNSDTSKE----TSLTVNKETTVETKETTTTNKQTS 163
Query: 839 TQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKG 888
T TS+ ++ + DL A + +AK T K KG
Sbjct: 164 TDGKEKTTSAKETQSIEKTSAKDL------APTSKVLAKPTPKAETTTKG 207
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 65.5 bits (158), Expect = 3e-10
Identities = 85/387 (21%), Positives = 140/387 (36%), Gaps = 29/387 (7%)
Query: 440 DVEQDAEKKATSSHFSASEESMDFLDKST--ASPASTKTGQAGSLSGSPK-----PFSPQ 492
D +++ KK + +E+ LD + T T Q +S SPK P +P+
Sbjct: 109 DNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPR 168
Query: 493 LSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQ 552
S P + T K ++ ++ + K+ S ++++T + ++
Sbjct: 169 PSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDL 228
Query: 553 LNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKN---EP 609
K + + + T E + + E + ++ E + + EP
Sbjct: 229 APTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEP 288
Query: 610 EDTEDKEGCQMDKEPS-AVKKKPKPTNPVE-IKEELKSTSPASEKADPGAVKDKASPEPE 667
T K KEP+ K+P PT P E K +P + K+ P K+ A P+
Sbjct: 289 APTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPK 348
Query: 668 KDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKE 727
K P+P K+ + +PT ++ E +
Sbjct: 349 K-------PAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTT 401
Query: 728 PKEPSPKQDVVGKTPPSTTVGSHSP--PETPV-LTRSSAQTSAAGATATTSTSSTVTVTA 784
PKEP+P K P TT SP P+ P T SA T+ TT+ S+ T
Sbjct: 402 PKEPAP---TTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 458
Query: 785 PAPAATGSPVKKQRPLLPKETAPAVQR 811
P+P T P P PKE AP +
Sbjct: 459 PSPTTTKEPA----PTTPKEPAPTTPK 481
Score = 59.7 bits (143), Expect = 2e-08
Identities = 85/400 (21%), Positives = 134/400 (33%), Gaps = 73/400 (18%)
Query: 466 KSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLK 525
K T P +G +G K +P S TT+ +K ST+ I
Sbjct: 118 KPTPKPPVVDEAGSGLDNGDFKVTTPDTS---TTQHNKVSTSPKI--------------- 159
Query: 526 ELSESVQQQSTPVPLISPKRQIRSRFQLNLDK--TIESCKAQLGINEISED-VYTAVEHS 582
+ + P P + P L ++K T+E+ + + S D
Sbjct: 160 ----TTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAK 215
Query: 583 DSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPS-AVKKKPKPTNPVEIKE 641
+++ EK+ + D S K + E T KEP+ K+P T P E
Sbjct: 216 ETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTP 275
Query: 642 ELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLD 701
++P + K +P K++P K+ P+P K+ + +PT
Sbjct: 276 TTIKSAPTTPK-EPAPTTTKSAPTTPKE------PAPTTTKEPAPTTPKEPAPTT----- 323
Query: 702 SDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRS 761
KEP+P T P + P +
Sbjct: 324 --------------------------TKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKE 357
Query: 762 SAQTSAAGATATTSTSSTVTVTAPAPAATGSPV----KKQRPLLPKETAPAVQRVVWNSS 817
A T+ T TT T PAP P KK P PKE AP + ++
Sbjct: 358 PAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTT 417
Query: 818 TVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSS 857
T + SP+T T+T+S+P T + +T S+
Sbjct: 418 TKE-----PSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSA 452
Score = 53.9 bits (128), Expect = 8e-07
Identities = 66/283 (23%), Positives = 102/283 (36%), Gaps = 38/283 (13%)
Query: 608 EPEDTEDKEGCQMDKEPSA--VKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPE 665
EP T KE + +A K+P PT P K K +P + K DK +P
Sbjct: 671 EPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPK--KPAPKELAPTTTKGPTSTTSDKPAPT 728
Query: 666 PEKDFSEKAKPSPHPIKDKLKGKDETDSP---TVHLGLDSDSESELVIDLGEDHSGRE-G 721
K+ + P P K ++P T + + ++ I D S E
Sbjct: 729 TPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELS 788
Query: 722 RKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVT 781
+ + E SPK+ V T +TP T+ T+A T +T
Sbjct: 789 AEPTPKALENSPKEPGVPTT------------KTPAATKPEMTTTAKDKTTERDLRTTPE 836
Query: 782 VTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTST----ITLVT 837
T AP T KETA ++ + T ++T + + T IT +
Sbjct: 837 TTTAAPKMT------------KETATTTEKTTESKITATTTQVTSTTTQDTTPFKITTLK 884
Query: 838 STQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTS 880
+T +P VT++ T +N P TA A +K T+
Sbjct: 885 TTTLAPKVTTTKKTITTTEIMNK--PEETAKPKDRATNSKATT 925
Score = 52.4 bits (124), Expect = 2e-06
Identities = 97/434 (22%), Positives = 151/434 (34%), Gaps = 53/434 (12%)
Query: 467 STASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKE 526
+T PA T T A + P P + + AP T K + TT + A KE
Sbjct: 440 TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPK-EPAPTTPKKPAPTTPKEPAPTTPKE 498
Query: 527 LSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSED 586
+ + ++ P +PK + + +T + +L + T E
Sbjct: 499 PAPTTTKKPAPT---TPKEPAPTTPK----ETAPTTPKKLTPTTPEKLAPTTPEKPAPTT 551
Query: 587 SEKSDSSDSEYISDDEQKSKNEPEDTEDKEGC-QMDKEPS-AVKKKPKPTNPVEIKEEL- 643
E+ + E + + EP T K KEP+ K+P PT P E
Sbjct: 552 PEELAPTTPE---EPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP 608
Query: 644 KSTSPASEKAD-PGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDS 702
K T+P + K P +K+ A P+K ++ P+ K+ + +PT G
Sbjct: 609 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTT--TKEPTSTTCDKPAPTTPKGTAP 666
Query: 703 DSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSS 762
+ PKEP+P K P TT +P ++
Sbjct: 667 TT-----------------------PKEPAP---TTPKEPAPTTPKGTAPTTLKEPAPTT 700
Query: 763 AQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQK 822
+ A A T+T + T+ PA T K+ P PKE AP +
Sbjct: 701 PKKPAPKELAPTTTKGPTSTTSDKPAPT--TPKETAPTTPKEPAPTTPK-----KPAPTT 753
Query: 823 EITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKM 882
T P+TS ++ T+T+ + S ST S P A + + T+K
Sbjct: 754 PETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAE---PTPKALENSPKEPGVPTTKT 810
Query: 883 MDAIKGTMTEIYND 896
A K MT D
Sbjct: 811 PAATKPEMTTTAKD 824
Score = 47.0 bits (110), Expect = 1e-04
Identities = 106/547 (19%), Positives = 172/547 (31%), Gaps = 77/547 (14%)
Query: 362 TPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISL 421
T T + Q D + + EK D+ + K+L +KP T +
Sbjct: 193 TKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAK-DLAPTSKVL-AKPTPKAETTTKGPA 250
Query: 422 SDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGS 481
P+ P T + ++ S+ + E + +T S +T A +
Sbjct: 251 LTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPA----PTTTKSAPTTPKEPAPT 306
Query: 482 LSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLD------RSKAEMDLKELSESVQQQS 535
+ P P +P+ AP TTK +TT S + + A KE + + ++
Sbjct: 307 TTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 366
Query: 536 TPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEH----SDSEDSEKSD 591
TP P + + + + E T + + E S +
Sbjct: 367 TPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTP 426
Query: 592 SSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPS-AVKKKPKPTNPVE------------ 638
+ + + EP T K KEPS K+P PT P E
Sbjct: 427 KEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 486
Query: 639 IKEELKSTSP------ASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKD-ET 691
+E T+P ++K P K+ A P++ K +KL E
Sbjct: 487 TPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEK 546
Query: 692 DSPTVHLGLDSDSESELVIDLGEDHSGREGR----KNKKEPKEPSPKQDVVG-------- 739
+PT L + E E+ + + KEP +PK+
Sbjct: 547 PAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPT 606
Query: 740 ------------------KTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVT 781
K P TT +P E T ++ A T+ T
Sbjct: 607 TPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAP 666
Query: 782 VTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQS 841
T PA T K+ P PK TAP +T+++ T + L +T
Sbjct: 667 TTPKEPAPT--TPKEPAPTTPKGTAP---------TTLKEPAPTTPKKPAPKELAPTTTK 715
Query: 842 SPLVTSS 848
P T+S
Sbjct: 716 GPTSTTS 722
Score = 38.1 bits (87), Expect = 0.048
Identities = 55/254 (21%), Positives = 91/254 (35%), Gaps = 36/254 (14%)
Query: 425 PRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSG 484
P +P T S V T + K+ T+ H S E + + +A P + G
Sbjct: 754 PETPPPTTSEVSTPTTT-----KEPTTIHKSPDESTPEL----SAEPTPKALENSPKEPG 804
Query: 485 SPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPK 544
P +P + P T T K TT L + + A + + + + +++T + +
Sbjct: 805 VPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATT 864
Query: 545 RQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQK 604
Q+ S T L ++ V T K + +E +
Sbjct: 865 TQVTS---TTTQDTTPFKITTLKTTTLAPKVTTT----------KKTITTTEIM------ 905
Query: 605 SKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASP 664
N+PE+T + D+ ++ PKP P K K TS K P K K +P
Sbjct: 906 --NKPEETAKPK----DRATNSKATTPKPQKPT--KAPKKPTSTKKPKTMPRVRKPKTTP 957
Query: 665 EPEKDFSEKAKPSP 678
P K S + +P
Sbjct: 958 TPRKMTSTMPELNP 971
Score = 33.5 bits (75), Expect = 1.2
Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 29/170 (17%)
Query: 719 REGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSS 778
++ +KN+ + K+P+PK VV + G T TST+
Sbjct: 108 KDNKKNRTK-KKPTPKPPVVDEAGSGLDNGDFKV-----------------TTPDTSTTQ 149
Query: 779 TVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTS 838
V+ T P+ RP LP + + + S TV ++ ++ T+T TS
Sbjct: 150 HNKVSTSPKITTAKPINP-RPSLPPNSDTSKE----TSLTVNKETTVETKETTTTNKQTS 204
Query: 839 TQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKG 888
T TS+ ++ + DL A + +AK T K KG
Sbjct: 205 TDGKEKTTSAKETQSIEKTSAKDL------APTSKVLAKPTPKAETTTKG 248
>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
sapiens]
Length = 1912
Score = 63.9 bits (154), Expect = 8e-10
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 16/94 (17%)
Query: 48 SSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQDGRNDF------------YCWVCHREGQV 95
S N +S D STS + +K L + K++ G + YC VC + G++
Sbjct: 325 SINSYSVSDGSTSRSSRSRKK--LRTTKKKKKGEEEVTAVDGYETDHQDYCEVCQQGGEI 382
Query: 96 LCCELCPRVYHAKCL--RLTSEPEGDWFCPECEK 127
+ C+ CPR YH CL + PEG W CP CEK
Sbjct: 383 ILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 416
Score = 56.2 bits (134), Expect = 2e-07
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 76 KEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPEC 125
+E+D + +C VC G++LCC+ CP YH CL L P G+W CP C
Sbjct: 442 EEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 493
Score = 37.7 bits (86), Expect = 0.062
Identities = 53/242 (21%), Positives = 95/242 (39%), Gaps = 36/242 (14%)
Query: 581 HSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTN---PV 637
H ++E+ + D S++E ++K +P D + + + KE + ++ ++ P
Sbjct: 32 HPENEEDPEEDLSETETPKLKKKKKPKKPRDPKIPKSKRQKKERMLLCRQLGDSSGEGPE 91
Query: 638 EIKEE----LKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDS 693
++EE L+S S S+ K K P+ EK K K +++ + D+ DS
Sbjct: 92 FVEEEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRK------EEEEEEDDDDDS 145
Query: 694 PTVHLGLDSDSESELVIDLG----------EDHSGREGRKNKKEPKEP--SPKQDVVGKT 741
+ S ++L+ D G ED+ K + P + K + +
Sbjct: 146 K------EPKSSAQLLEDWGMEDIDHVFSEEDYRTLTNYKAFSQFVRPLIAAKNPKIAVS 199
Query: 742 PPSTTVGS---HSPPETPVLTRSSAQTSAAGATATTSTSSTVTVT--APAPAATGSPVKK 796
+G+ P S A +AA A A S VT T AP P P++K
Sbjct: 200 KMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESMVTATEVAPPPPPVEVPIRK 259
Query: 797 QR 798
+
Sbjct: 260 AK 261
>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
sapiens]
Length = 1954
Score = 63.9 bits (154), Expect = 8e-10
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 26 RSKDPGSAERTAQKRKFPSPP-HSSNGHSPQDTSTSPIKKK--KKPGLLNSNNKEQDGRN 82
R K S E ++ F S HS++ S + K+ KK + + + E D ++
Sbjct: 285 RKKGSSSEEDEREESDFDSASIHSASVRSECSAALGKKSKRRRKKKRIDDGDGYETDHQD 344
Query: 83 DFYCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPECEK 127
YC VC + G+++ C+ CPR YH CL L PEG W CP CEK
Sbjct: 345 --YCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEK 389
Score = 54.7 bits (130), Expect = 5e-07
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 76 KEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPEC 125
+E+D +F C VC G++LCC+ CP YH CL L P G+W CP C
Sbjct: 410 EEEDDHMEF-CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRC 460
Score = 35.0 bits (79), Expect = 0.40
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 9/124 (7%)
Query: 613 EDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASE---KADPGAVKDKASPEPEKD 669
E G Q ++P V+ P + VE ++ K SPAS+ + + +KA P PE+
Sbjct: 1578 EKDPGAQKPRQPLEVQALPAALDRVESED--KHESPASKERAREERPEETEKAPPSPEQL 1635
Query: 670 FSEKAKPSPHPIKDKLKGK---DETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKK 726
E+ P I DKL+ DS + D+ +E + I+ ++ E + KK
Sbjct: 1636 PREEVLPEKEKILDKLELSLIHSRGDSSELRPD-DTKAEEKEPIETQQNGDKEEDDEGKK 1694
Query: 727 EPKE 730
E K+
Sbjct: 1695 EDKK 1698
>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
[Homo sapiens]
Length = 2000
Score = 63.2 bits (152), Expect = 1e-09
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 47 HSSNGHSPQDTSTSPIKK----KKKPGLLN----SNNKEQDGR---NDFYCWVCHREGQV 95
HS++G T +K+ +KK +L + +E DG + YC VC + G++
Sbjct: 332 HSASGRPDGPVRTKKLKRGRPGRKKKKVLGCPAVAGEEEVDGYETDHQDYCEVCQQGGEI 391
Query: 96 LCCELCPRVYHAKCL--RLTSEPEGDWFCPECEK 127
+ C+ CPR YH CL L PEG W CP CEK
Sbjct: 392 ILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK 425
Score = 53.1 bits (126), Expect = 1e-06
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 76 KEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPEC 125
KE++ + YC VC G++LCC+ C YH CL L P G+W CP C
Sbjct: 449 KEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 500
>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
[Homo sapiens]
Length = 1966
Score = 63.2 bits (152), Expect = 1e-09
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 47 HSSNGHSPQDTSTSPIKK----KKKPGLLN----SNNKEQDGR---NDFYCWVCHREGQV 95
HS++G T +K+ +KK +L + +E DG + YC VC + G++
Sbjct: 332 HSASGRPDGPVRTKKLKRGRPGRKKKKVLGCPAVAGEEEVDGYETDHQDYCEVCQQGGEI 391
Query: 96 LCCELCPRVYHAKCL--RLTSEPEGDWFCPECEK 127
+ C+ CPR YH CL L PEG W CP CEK
Sbjct: 392 ILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK 425
Score = 53.1 bits (126), Expect = 1e-06
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 76 KEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPEC 125
KE++ + YC VC G++LCC+ C YH CL L P G+W CP C
Sbjct: 449 KEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 500
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 63.2 bits (152), Expect = 1e-09
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 47 HSSNGHSPQDTSTSPIKK----KKKPGLLN----SNNKEQDGR---NDFYCWVCHREGQV 95
HS++G T +K+ +KK +L + +E DG + YC VC + G++
Sbjct: 391 HSASGRPDGPVRTKKLKRGRPGRKKKKVLGCPAVAGEEEVDGYETDHQDYCEVCQQGGEI 450
Query: 96 LCCELCPRVYHAKCL--RLTSEPEGDWFCPECEK 127
+ C+ CPR YH CL L PEG W CP CEK
Sbjct: 451 ILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEK 484
Score = 53.1 bits (126), Expect = 1e-06
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 76 KEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLR--LTSEPEGDWFCPEC 125
KE++ + YC VC G++LCC+ C YH CL L P G+W CP C
Sbjct: 508 KEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 559
Score = 37.4 bits (85), Expect = 0.081
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 24/173 (13%)
Query: 571 ISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQ------KSKNEPEDTEDKEGCQM--DK 622
+SE+ E D E+ E+ +++D + DD++ + D GC +
Sbjct: 17 VSEEEEEEEEEGDEEEEEEVEAADEDDEEDDDEGVLGRGPGHDRGRDRHSPPGCHLFPPP 76
Query: 623 EPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIK 682
P P P P K++++ A G K K P+ +K+ KP P K
Sbjct: 77 PPPPPPLPPPPPPPPPDKDDIRLLPSAL-----GVKKRKRGPKKQKE----NKPG-KPRK 126
Query: 683 DKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQ 735
K + +E G + D E G ++ GRK +++ +E K+
Sbjct: 127 RKKRDSEE------EFGSERDEYREKSESGGSEYGTGPGRKRRRKHREKKEKK 173
>gi|239740827 PREDICTED: hypothetical protein XP_002344067 [Homo
sapiens]
Length = 1521
Score = 62.0 bits (149), Expect = 3e-09
Identities = 82/406 (20%), Positives = 147/406 (36%), Gaps = 26/406 (6%)
Query: 717 SGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTST 776
+G E E E + +T +T GS + T T S T+ + A + +T
Sbjct: 549 TGLETTTTSTEGSEMTTVSTTGAETTTDSTEGSGT---TAASTAGSETTTVSTADSENTT 605
Query: 777 SSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLV 836
+ST + + TGS TA +ST + T S + S T+V
Sbjct: 606 ASTADSETTSASTTGSETT---------TASTTSSETTTASTEGSETTTVSTTDSETTMV 656
Query: 837 TSTQSSPLVTSS-GSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYN 895
++T S +TS+ GS +T VS+ ++ ++T + + + G+ T I +
Sbjct: 657 STTGSERTITSTEGSETTTVSATGSETTVSTEGSGTTTVSITGSETTKVSTTGSETTITS 716
Query: 896 DLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAE 955
T ++I E + + T +E + + +A
Sbjct: 717 TEGSEITTASITGSETTTASTEGSETTTASTEGSETTSASTTGSETTTASTTSSETTMAS 776
Query: 956 VKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSA 1015
+ E + K A+ K +F T+ + S S
Sbjct: 777 IMGS-ETTMASTIGSETTKVSTASSKMTTVFTENSETTIASTTASET----TTVSTAGSE 831
Query: 1016 TAPQQEADAEVNTETLNKSSQGSSSSTQSAPSETASASKEKETSAEKSKESGSTLDLSGS 1075
T P A +E T T + S+ +++ST+ + + TAS + T+A +T GS
Sbjct: 832 TIPASTAGSETTTTTSTEGSETTTASTEGSETTTASTESSETTTATTIGSETTTASTEGS 891
Query: 1076 RETPSSILLGSNQGSDHSRSNKSSWSSSDEKRGSTRSDHNTSTSTK 1121
T +S ++ S + +S S+ ST T+ ST+
Sbjct: 892 ETTTTS--------TEGSETTTASTEGSEITTVSTTGSETTTASTE 929
Score = 53.9 bits (128), Expect = 8e-07
Identities = 141/739 (19%), Positives = 262/739 (35%), Gaps = 52/739 (7%)
Query: 415 TGRRISLSDMPRSPMSTNSSVHTGSDVEQDA-EKKATSSHFSASEESMDFL----DKSTA 469
TG + + S M+T S+ TG++ D+ E T++ +A E+ + +TA
Sbjct: 549 TGLETTTTSTEGSEMTTVST--TGAETTTDSTEGSGTTAASTAGSETTTVSTADSENTTA 606
Query: 470 SPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKE--L 527
S A ++T A S +GS + S+ TT + + S T ++ + + + E +
Sbjct: 607 STADSETTSA-STTGSETTTASTTSSETTTASTEGSETTTVSTTDSETTMVSTTGSERTI 665
Query: 528 SESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDS 587
+ + ++T V + + + +I + SE T+ E S+ +
Sbjct: 666 TSTEGSETTTVSATGSETTVSTEGSGTTTVSITGSETTKVSTTGSETTITSTEGSEITTA 725
Query: 588 EKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTS 647
+ S + ++ + + E +E E + T I T+
Sbjct: 726 SITGSETTTASTEGSETTTASTEGSETTSASTTGSETTTASTTSSETTMASIMGS--ETT 783
Query: 648 PASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESE 707
AS AS + F+E ++ + + +++ TV + SE+
Sbjct: 784 MASTIGSETTKVSTASSKMTTVFTENSETT-------IASTTASETTTVST---AGSETI 833
Query: 708 LVIDLGEDHS------GREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRS 761
G + + G E E E + +T +TT+GS + T T
Sbjct: 834 PASTAGSETTTTTSTEGSETTTASTEGSETTTASTESSETTTATTIGSET---TTASTEG 890
Query: 762 SAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQ-RVVWNSSTVQ 820
S T+ + + T+T+ST + TGS + T + + + ST
Sbjct: 891 SETTTTSTEGSETTTASTEGSEITTVSTTGSETTTASTEGSETTTASTEGSELTTVSTTG 950
Query: 821 QKEITQSPSTSTITLVTSTQSSPLVTSS-GSMSTLVSSVNADLPIATASADVAADIAKYT 879
+ IT S S T VT+ S S+ GS +T VS+ ++ A+ ++
Sbjct: 951 SETITVSAEGSETTTVTTMGSETTTASTAGSETTTVSTAGSETTTASIEGSETTTVSSTG 1010
Query: 880 SKMMD-AIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTM 938
S+ + GT T I + TT T A + + + T
Sbjct: 1011 SETTTVSTTGTETTITSTEGSETTTVTTAGSETTAVYTTGSETTTTSTEGSETTTVSTTG 1070
Query: 939 AEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYP 998
+E + + + A ET ++ T+
Sbjct: 1071 SETTTASTADLETTTVSTSGSGTTTASTAGSETT-----------TVYITGSKTTTASTE 1119
Query: 999 CQQAHWPEHMKSCTQSATAPQQEADAEVNT--ETLNKSSQGSSSSTQSAPSE--TASASK 1054
+A S T +A+ E T ET S+ GS ++T SA T ++++
Sbjct: 1120 GSEATTVSTTSSETTTASTTGSEMTTVFTTVSETTTVSTIGSEATTSSAAGSEATTTSTE 1179
Query: 1055 EKETSAEKSKESGSTLDLSGSRETPSSILLGSNQGSDHSRSNKSSWSSSDEKRGSTR--- 1111
ET+ + S +T + ET ++ GS + + +++S SS +T
Sbjct: 1180 GSETTTASTAGSETTTASTAGSETTTASTSGSETNTACTTGSETSTPSSAGSETNTAFII 1239
Query: 1112 SDHNTSTSTKSLLPKESRL 1130
T ST SL P + L
Sbjct: 1240 GSETTIASTASLEPTATSL 1258
Score = 50.1 bits (118), Expect = 1e-05
Identities = 77/402 (19%), Positives = 151/402 (37%), Gaps = 45/402 (11%)
Query: 740 KTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRP 799
+T ++T GS + +P ++++ + + TTST+ + T + + +
Sbjct: 34 ETTTASTAGSETTTPSPTGSQTTIVSISGSEITTTSTAGSENTTVSSAGSGTTTASMAGS 93
Query: 800 LLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVN 859
TA + V S T + + + + T T T++ + + +++GS +T VS+V
Sbjct: 94 ETTVSTAGSETTTV--SITGTETTMVSAMGSETTTNSTTSSETTVTSTAGSETTTVSTVG 151
Query: 860 ADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKL 919
++ A +AD A T MT ++ S+ T ST E +
Sbjct: 152 SETTTA-YTADSETTAASTTG-------SEMTTVFTAGSETITPSTAGS------ETTTV 197
Query: 920 QWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCAN 979
+ + E T A S + +E K + V + A+
Sbjct: 198 STAGSETTTVSTTGSETTTASTAHSETTAASTMGSETTKVSTAGSETTVSTAGSETTAAS 257
Query: 980 CKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSS 1039
+ NT++ E K+ T S T + A + +E S+ GS
Sbjct: 258 TEDSET-----NTAF----------TEDSKTTTASTTGFETTAASTTGSEPTMASTMGSE 302
Query: 1040 S-------------STQSAPSETASASKEKETSAEKSKESGSTLDLSGSRETPSSILLGS 1086
+ ST S+ T A+ + A +T+ +GS T +SI +GS
Sbjct: 303 TTMASTIGPETTKVSTASSEVTTVFAAGSETIRASTVGSETTTVSTTGSETTTASI-MGS 361
Query: 1087 NQGSDHSRSNKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKES 1128
+D + ++++ +S++ +T S + +T S E+
Sbjct: 362 ETSTDSTTGSETTTASTEGSETTTASTEGSEATTVSTTGSET 403
Score = 48.5 bits (114), Expect = 4e-05
Identities = 116/563 (20%), Positives = 190/563 (33%), Gaps = 76/563 (13%)
Query: 375 DPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLS--GGTGRRISLSDMPRSPMSTN 432
D N +A TA + + T + S G +S +D + +ST
Sbjct: 600 DSENTTASTADSETTSASTTGSETTTASTTSSETTTASTEGSETTTVSTTDSETTMVSTT 659
Query: 433 SSVHTGSDVE--QDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGS--------- 481
S T + E + AT S + S E S +TK GS
Sbjct: 660 GSERTITSTEGSETTTVSATGSETTVSTEGSGTTTVSITGSETTKVSTTGSETTITSTEG 719
Query: 482 -------LSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKE-------- 526
++GS + + TT + + S T S + + A E
Sbjct: 720 SEITTASITGSETTTASTEGSETTTASTEGSETTSASTTGSETTTASTTSSETTMASIMG 779
Query: 527 ----LSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHS 582
++ ++ ++T V S K + + F N + TI S A SE T V +
Sbjct: 780 SETTMASTIGSETTKVSTASSK--MTTVFTENSETTIASTTA-------SET--TTVSTA 828
Query: 583 DSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEE 642
SE S + + + S+ TE E E S + T I E
Sbjct: 829 GSETIPASTAGSETTTTTSTEGSETTTASTEGSETTTASTESS------ETTTATTIGSE 882
Query: 643 LKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDS 702
+ S + + + + + SE S + + +++ T S
Sbjct: 883 TTTASTEGSETTTTSTEGSETTTASTEGSEITTVSTTGSETTTASTEGSETTTA-----S 937
Query: 703 DSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSS 762
SEL +G E E E + + +T ++T GS ET ++ +
Sbjct: 938 TEGSELTT---VSTTGSETITVSAEGSETTTVTTMGSETTTASTAGS----ETTTVSTAG 990
Query: 763 AQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQK 822
++T+ TA+ S T TV++ TGS + T + + + T
Sbjct: 991 SETT----TASIEGSETTTVSS-----TGSETTTVSTTGTETTITSTEGSETTTVTTAGS 1041
Query: 823 EITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKM 882
E T +T + T TST+ S T S + S ++ ADL T S + T+
Sbjct: 1042 ETTAVYTTGSETTTTSTEGSETTTVSTTGSETTTASTADLETTTVSTSGSGTTTASTA-- 1099
Query: 883 MDAIKGTMTEIYNDLSKNTTGST 905
T +Y SK TT ST
Sbjct: 1100 ----GSETTTVYITGSKTTTAST 1118
Score = 46.2 bits (108), Expect = 2e-04
Identities = 133/752 (17%), Positives = 262/752 (34%), Gaps = 87/752 (11%)
Query: 409 PVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKST 468
P +G +S + + +ST S T + A + T++ SE + K +
Sbjct: 187 PSTAGSETTTVSTAGSETTTVSTTGSETTTAST---AHSETTAASTMGSETT-----KVS 238
Query: 469 ASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELS 528
+ + T AGS + + + + T D +TT S + ++
Sbjct: 239 TAGSETTVSTAGSETTAASTEDSETNTAFTE--DSKTTTASTTGFETTAASTTGSEPTMA 296
Query: 529 ESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSE 588
++ ++T I P+ S + + + + + + T V + SE +
Sbjct: 297 STMGSETTMASTIGPETTKVSTASSEVTTVFAAGSETIRASTVGSET-TTVSTTGSETTT 355
Query: 589 KSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPS---AVKKKPKPTNPVEIKEELKS 645
S SE +D S+ TE E E S V T V I + ++
Sbjct: 356 ASIMG-SETSTDSTTGSETTTASTEGSETTTASTEGSEATTVSTTGSETTTVSITDS-ET 413
Query: 646 TSPASEKADPGAVKDKA--SPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSD 703
T+ +E ++ AV + + SE S + + +++ TV +
Sbjct: 414 TTTCTEGSEMTAVSTTVFETTTASTEGSEITIASTSDSETTTASTEGSETTTV---TTAG 470
Query: 704 SESELVIDLGED-----HSGRE-------GRKNKKEPKEPSPKQDVVGKTPPSTTVGSHS 751
SE++ G + ++G E G E S V TTV +
Sbjct: 471 SETKTAYTTGSETTTASNTGLETTTVFTIGSDTTTASTEGSETTAVSATGSEMTTVSTEG 530
Query: 752 PPETPVLTRSSAQTSAAGATATTSTSST----VTVTAPAPAATGSPVKKQRPLLPKETAP 807
T V T S T+ + T+T+ST +T + A T + + TA
Sbjct: 531 SENTTVSTTGSETTTVSTTGLETTTTSTEGSEMTTVSTTGAETTTDSTEGSGTTAASTAG 590
Query: 808 AVQRVVWNS------STVQQKEITQSPSTSTITLVTSTQSSPLVTSS--GSMSTLVSSVN 859
+ V + ++ E T + +T + T ST SS T+S GS +T VS+ +
Sbjct: 591 SETTTVSTADSENTTASTADSETTSASTTGSETTTASTTSSETTTASTEGSETTTVSTTD 650
Query: 860 ADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKL 919
++ + + + + S+ T++ ++ + +T GS + E K+
Sbjct: 651 SETTMVSTTGSERTITSTEGSETT-----TVSATGSETTVSTEGSGTTTVSITGSETTKV 705
Query: 920 QWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCAN 979
+ E+T A + S + A + ET +
Sbjct: 706 STTGSETTITSTEGSEITTASITGS-----ETTTASTEGSETTTASTEGSETTSASTTGS 760
Query: 980 CKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSS 1039
++ T S T+ + + + +ET S+ GS
Sbjct: 761 -----------------------------ETTTASTTSSETTMASIMGSETTMASTIGSE 791
Query: 1040 S---STQSAPSETASASKEKETSAEKSKESGSTLDLSGSRETPSSILLGSNQGSDHSRSN 1096
+ ST S+ T + T A + +T+ +GS P+S + + +
Sbjct: 792 TTKVSTASSKMTTVFTENSETTIASTTASETTTVSTAGSETIPASTAGSETTTTTSTEGS 851
Query: 1097 KSSWSSSDEKRGSTRSDHNTSTSTKSLLPKES 1128
+++ +S++ +T S ++ T+T + + E+
Sbjct: 852 ETTTASTEGSETTTASTESSETTTATTIGSET 883
Score = 44.7 bits (104), Expect = 5e-04
Identities = 82/400 (20%), Positives = 156/400 (39%), Gaps = 39/400 (9%)
Query: 735 QDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPV 794
+ V TT S + ET +++ ++T+ +TTS+ +TVT TA + T S V
Sbjct: 94 ETTVSTAGSETTTVSITGTETTMVSAMGSETTT---NSTTSSETTVTSTAGSETTTVSTV 150
Query: 795 KKQRP---LLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSM 851
+ ET A S+T + + + TIT T+ + V+++GS
Sbjct: 151 GSETTTAYTADSETTAA-------STTGSEMTTVFTAGSETITPSTAGSETTTVSTAGSE 203
Query: 852 STLVSSVNADLPIAT---ASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGST-IA 907
+T VS+ ++ A+ + A+ + T+K+ A G+ T + S+ T ST +
Sbjct: 204 TTTVSTTGSETTTASTAHSETTAASTMGSETTKVSTA--GSETTVSTAGSETTAASTEDS 261
Query: 908 EIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQA 967
E E K + E T A S + + + + +
Sbjct: 262 ETNTAFTEDSK-------TTTASTTGFETTAA----STTGSEPTMASTMGSETTMASTIG 310
Query: 968 VDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSAT--APQQEADAE 1025
+ TK A+ + +F T + S T +A+ + D+
Sbjct: 311 PETTKVS--TASSEVTTVFAAGSETIRASTVGSETTTVSTTGSETTTASIMGSETSTDST 368
Query: 1026 VNTETLNKSSQGS---SSSTQSAPSETASASKEKETSAEKSKESGSTLDLSGSRET--PS 1080
+ET S++GS ++ST+ + + T S + + T+ + +T GS T +
Sbjct: 369 TGSETTTASTEGSETTTASTEGSEATTVSTTGSETTTVSITDSETTTTCTEGSEMTAVST 428
Query: 1081 SILLGSNQGSDHSRSNKSSWSSSDEKRGSTRSDHNTSTST 1120
++ + ++ S +S S S+ ST T+ +T
Sbjct: 429 TVFETTTASTEGSEITIASTSDSETTTASTEGSETTTVTT 468
Score = 37.0 bits (84), Expect = 0.11
Identities = 92/473 (19%), Positives = 169/473 (35%), Gaps = 24/473 (5%)
Query: 407 SKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDK 466
S+ + TG + + S + S + + + + + T ++S+ + F +
Sbjct: 750 SETTSASTTGSETTTASTTSSETTMASIMGSETTMASTIGSETTKVSTASSKMTTVFTEN 809
Query: 467 STASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGS-ILNLNLDRSKAEMDLK 525
S + AST + ++S + P +A T T TST GS + + S+
Sbjct: 810 SETTIASTTASETTTVSTAGSETIPASTAGSETTTT-TSTEGSETTTASTEGSETTTAST 868
Query: 526 ELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSE 585
E SE+ +T + S + + E + E SE T V + SE
Sbjct: 869 ESSET----TTATTIGSETTTASTEGSETTTTSTEGSETTTASTEGSE--ITTVSTTGSE 922
Query: 586 DSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPS----AVKKKPKPTNPVEIKE 641
+ S + SE + + S+ T E + E S + T
Sbjct: 923 TTTAS-TEGSETTTASTEGSELTTVSTTGSETITVSAEGSETTTVTTMGSETTTASTAGS 981
Query: 642 ELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLD 701
E + S A + +++ + SE S + + + +++ TV
Sbjct: 982 ETTTVSTAGSETTTASIEGSETTTVSSTGSETTTVSTTGTETTITSTEGSETTTV---TT 1038
Query: 702 SDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPP--STTVGSHSPPETPVLT 759
+ SE+ V G + + ++ + + T +TTV + T T
Sbjct: 1039 AGSETTAVYTTGSETTTTSTEGSETTTVSTTGSETTTASTADLETTTVSTSGSGTTTAST 1098
Query: 760 RSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTV 819
S T+ + T+T+ST A + T S + T V V ++TV
Sbjct: 1099 AGSETTTVYITGSKTTTASTEGSEATTVSTTSSETTTASTTGSEMT--TVFTTVSETTTV 1156
Query: 820 QQ--KEITQSPSTSTITLVTSTQSSPLVTSS--GSMSTLVSSVNADLPIATAS 868
E T S + + TST+ S T+S GS +T S+ ++ A+ S
Sbjct: 1157 STIGSEATTSSAAGSEATTTSTEGSETTTASTAGSETTTASTAGSETTTASTS 1209
Score = 33.9 bits (76), Expect = 0.90
Identities = 34/166 (20%), Positives = 72/166 (43%), Gaps = 12/166 (7%)
Query: 738 VGKTPPSTTVGSHSPPE-------TPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAAT 790
V +T +T+GS + T T S T+A+ A + T+T+ST + +
Sbjct: 1150 VSETTTVSTIGSEATTSSAAGSEATTTSTEGSETTTASTAGSETTTASTAGSETTTASTS 1209
Query: 791 GSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTS---TITLVTSTQSSPLVTS 847
GS + + P+ N++ + E T + + S T T +T ++++ + +
Sbjct: 1210 GSETNTACTTGSETSTPSSAGSETNTAFIIGSETTIASTASLEPTATSLTGSETTTVSIT 1269
Query: 848 SGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEI 893
+ + ++V++ + T + DV+ I T+ M + T T +
Sbjct: 1270 ASGATAASTTVSSTTFVLTKATDVS--IQPITNTPMSGTRTTGTRL 1313
Score = 33.9 bits (76), Expect = 0.90
Identities = 49/229 (21%), Positives = 82/229 (35%), Gaps = 37/229 (16%)
Query: 704 SESELVIDLGEDHS-----GREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSH-------- 750
SE+ V +G + + G E E E + +T ++T GS
Sbjct: 1151 SETTTVSTIGSEATTSSAAGSEATTTSTEGSETTTASTAGSETTTASTAGSETTTASTSG 1210
Query: 751 SPPETPVLTRSSAQTSAAGATAT---------TSTSSTVTVTAPAPAATGS-----PVKK 796
S T T S T ++ + T T+ +ST ++ A + TGS +
Sbjct: 1211 SETNTACTTGSETSTPSSAGSETNTAFIIGSETTIASTASLEPTATSLTGSETTTVSITA 1270
Query: 797 QRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVS 856
T + V+ ++ V + IT +P + T T T +S VT + M S
Sbjct: 1271 SGATAASTTVSSTTFVLTKATDVSIQPITNTPMSGTRTTGTRLTASSSVTMAPGMDFTAS 1330
Query: 857 SVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGST 905
+ + +P I TS + + G + + TTGST
Sbjct: 1331 AASHTVP----------GIVLNTSGLGTSTMGASSTTSAHGVRTTTGST 1369
Score = 30.4 bits (67), Expect = 10.0
Identities = 43/185 (23%), Positives = 68/185 (36%), Gaps = 7/185 (3%)
Query: 721 GRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQT--SAAGATATTSTS- 777
G K E S V + +TT + T V T S T S G+ ATTS++
Sbjct: 1110 GSKTTTASTEGSEATTVSTTSSETTTASTTGSEMTTVFTTVSETTTVSTIGSEATTSSAA 1169
Query: 778 -STVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLV 836
S T T+ + T + TA + S + T TST +
Sbjct: 1170 GSEATTTSTEGSETTTASTAGSETTTASTAGSETTTASTSGSETNTACTTGSETSTPSSA 1229
Query: 837 TSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYND 896
S ++ + GS +T+ S+ + + P AT+ T+ A T++
Sbjct: 1230 GSETNTAFII--GSETTIASTASLE-PTATSLTGSETTTVSITASGATAASTTVSSTTFV 1286
Query: 897 LSKNT 901
L+K T
Sbjct: 1287 LTKAT 1291
>gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens]
Length = 680
Score = 60.8 bits (146), Expect = 7e-09
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 43 PSPPHSSNGHSPQDTSTSPIKKKKKP----GLLNSNNKEQDGRNDFYCWVCHREGQVLCC 98
P+ P SS+ SP++ T P L + + + D DF C VC + GQ+L C
Sbjct: 445 PTSPQSSHPDSPENEKTETTFTFPAPVQPVSLPSPTSTDGDIHEDF-CSVCRKSGQLLMC 503
Query: 99 ELCPRVYHAKCL--RLTSEPEGDWFCPECE 126
+ C RVYH CL L + P+G W CP C+
Sbjct: 504 DTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 533
>gi|239754269 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1531
Score = 60.1 bits (144), Expect = 1e-08
Identities = 81/406 (19%), Positives = 146/406 (35%), Gaps = 26/406 (6%)
Query: 717 SGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTST 776
+G E E E + +T +T GS + T T S T+ + A + +T
Sbjct: 549 TGLETTTTSTEGSEMTTVSTTGAETTTDSTEGSGT---TAASTAGSETTTVSTADSENTT 605
Query: 777 SSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLV 836
+ST + + TGS TA +ST + T S + S T+V
Sbjct: 606 ASTADSETTSASTTGSETT---------TASTTSSETTTASTEGSETTTVSTTDSETTMV 656
Query: 837 TSTQSSPLVTSS-GSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYN 895
++T S +TS+ GS +T VS+ ++ ++T + + + G+ T +
Sbjct: 657 STTGSERTITSTEGSETTTVSATGSETTVSTEGSGTTTVSITGSETTKVSTTGSETTTTS 716
Query: 896 DLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAE 955
T ++I E + + T +E + + +A
Sbjct: 717 TEGSEITTASITGSETTTASTEGSETTTASTEGSETTSASTTGSETTTASTTSSETTMAS 776
Query: 956 VKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSA 1015
+ E + K A+ K +F T+ + S S
Sbjct: 777 IMGS-ETTMASTIGSETTKVSTASSKMTTVFTENSETTIASTTASET----TTVSTAGSE 831
Query: 1016 TAPQQEADAEVNTETLNKSSQGSSSSTQSAPSETASASKEKETSAEKSKESGSTLDLSGS 1075
T P A +E T T + S+ +++ST+ + + TAS + T+A +T GS
Sbjct: 832 TIPASTAGSETTTTTSTEGSETTTASTEGSETTTASTESSETTTATTIGSETTTASTEGS 891
Query: 1076 RETPSSILLGSNQGSDHSRSNKSSWSSSDEKRGSTRSDHNTSTSTK 1121
T +S ++ S + +S S+ ST T+ ST+
Sbjct: 892 ETTTTS--------TEGSETTTASTEGSEITTVSTTGSETTTASTE 929
Score = 55.1 bits (131), Expect = 4e-07
Identities = 136/736 (18%), Positives = 264/736 (35%), Gaps = 49/736 (6%)
Query: 415 TGRRISLSDMPRSPMSTNSSVHTGSDVEQDA-EKKATSSHFSASEESMDFL----DKSTA 469
TG + + S M+T S+ TG++ D+ E T++ +A E+ + +TA
Sbjct: 549 TGLETTTTSTEGSEMTTVST--TGAETTTDSTEGSGTTAASTAGSETTTVSTADSENTTA 606
Query: 470 SPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKE--L 527
S A ++T A S +GS + S+ TT + + S T ++ + + + E +
Sbjct: 607 STADSETTSA-STTGSETTTASTTSSETTTASTEGSETTTVSTTDSETTMVSTTGSERTI 665
Query: 528 SESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDS 587
+ + ++T V + + + +I + SE T+ E S+ +
Sbjct: 666 TSTEGSETTTVSATGSETTVSTEGSGTTTVSITGSETTKVSTTGSETTTTSTEGSEITTA 725
Query: 588 EKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTS 647
+ S + ++ + + E +E E + T I T+
Sbjct: 726 SITGSETTTASTEGSETTTASTEGSETTSASTTGSETTTASTTSSETTMASIMGS--ETT 783
Query: 648 PASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESE 707
AS AS + F+E ++ + + +++ TV + SE+
Sbjct: 784 MASTIGSETTKVSTASSKMTTVFTENSETT-------IASTTASETTTVST---AGSETI 833
Query: 708 LVIDLGEDHS------GREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRS 761
G + + G E E E + +T +TT+GS + T T
Sbjct: 834 PASTAGSETTTTTSTEGSETTTASTEGSETTTASTESSETTTATTIGSET---TTASTEG 890
Query: 762 SAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQ-RVVWNSSTVQ 820
S T+ + + T+T+ST + TGS + T + + + ST
Sbjct: 891 SETTTTSTEGSETTTASTEGSEITTVSTTGSETTTASTEGSETTTASTEGSELTTVSTTG 950
Query: 821 QKEITQSPSTSTITLVTSTQSSPLVTSS-GSMSTLVSSVNADLPIATASADVAADIAKYT 879
+ IT S S T VT+ S S+ GS +T VS+ ++ A+ ++
Sbjct: 951 SETITVSAEGSETTTVTTMGSETTTASTAGSETTTVSTAGSETTTASIEGSETTTVSSTG 1010
Query: 880 SKMMD-AIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTM 938
S+ + GT T I + TT T A + + + T
Sbjct: 1011 SETTTVSTTGTETTITSTEGSETTTVTTAGSETTAVYTTGSETTTTSTEGSETTTVSTTG 1070
Query: 939 AEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYP 998
+E + + + A ET ++ T+
Sbjct: 1071 SETTTASTADLETTTVSTSGSGTTTASTAGSETT-----------TVYITGSKTTTASTE 1119
Query: 999 CQQAHWPEHMKSCTQSATAPQQEADAEVNT--ETLNKSSQGSSSSTQSAPSE--TASASK 1054
+A S T +A+ E T ET S+ GS ++T SA T ++++
Sbjct: 1120 GSEATTVSTTSSETTTASTTGSEMTTVFTTVSETTTVSTIGSEATTSSAAGSEATTTSTE 1179
Query: 1055 EKETSAEKSKESGSTLDLSGSRETPSSILLGSNQGSDHSRSNKSSWSSSDEKRGSTRSDH 1114
ET+ + S +T + ET ++ GS + + ++++ + + ST S
Sbjct: 1180 GSETTTASTAGSETTTASTAGSETTTASTAGSETTTASTSGSETNTACTTGSETSTPSSA 1239
Query: 1115 NTSTSTKSLLPKESRL 1130
+ T+T ++ E+ +
Sbjct: 1240 GSETNTAFIIGSETTI 1255
Score = 50.1 bits (118), Expect = 1e-05
Identities = 77/402 (19%), Positives = 151/402 (37%), Gaps = 45/402 (11%)
Query: 740 KTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRP 799
+T ++T GS + +P ++++ + + TTST+ + T + + +
Sbjct: 34 ETTTASTAGSETTTPSPTGSQTTIVSISGSEITTTSTAGSENTTVSSAGSGTTTASMAGS 93
Query: 800 LLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVN 859
TA + V S T + + + + T T T++ + + +++GS +T VS+V
Sbjct: 94 ETTVSTAGSETTTV--SITGTETTMVSAMGSETTTNSTTSSETTVTSTAGSETTTVSTVG 151
Query: 860 ADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKL 919
++ A +AD A T MT ++ S+ T ST E +
Sbjct: 152 SETTTA-YTADSETTAASTTG-------SEMTTVFTAGSETITPSTAGS------ETTTV 197
Query: 920 QWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCAN 979
+ + E T A S + +E K + V + A+
Sbjct: 198 STAGSETTTVSTTGSETTTASTAHSETTAASTMGSETTKVSTAGSETTVSTAGSETTAAS 257
Query: 980 CKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSS 1039
+ NT++ E K+ T S T + A + +E S+ GS
Sbjct: 258 TEDSET-----NTAF----------TEDSKTTTASTTGFETTAASTTGSEPTMASTMGSE 302
Query: 1040 S-------------STQSAPSETASASKEKETSAEKSKESGSTLDLSGSRETPSSILLGS 1086
+ ST S+ T A+ + A +T+ +GS T +SI +GS
Sbjct: 303 TTMASTIGPETTKVSTASSEVTTVFAAGSETIRASTVGSETTTVSTTGSETTTASI-MGS 361
Query: 1087 NQGSDHSRSNKSSWSSSDEKRGSTRSDHNTSTSTKSLLPKES 1128
+D + ++++ +S++ +T S + +T S E+
Sbjct: 362 ETSTDSTTGSETTTASTEGSETTTASTEGSEATTVSTTGSET 403
Score = 48.5 bits (114), Expect = 4e-05
Identities = 111/555 (20%), Positives = 187/555 (33%), Gaps = 60/555 (10%)
Query: 375 DPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLS--GGTGRRISLSDMPRSPMSTN 432
D N +A TA + + T + S G +S +D + +ST
Sbjct: 600 DSENTTASTADSETTSASTTGSETTTASTTSSETTTASTEGSETTTVSTTDSETTMVSTT 659
Query: 433 SSVHTGSDVE--QDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFS 490
S T + E + AT S + S E S +TK GS + +
Sbjct: 660 GSERTITSTEGSETTTVSATGSETTVSTEGSGTTTVSITGSETTKVSTTGSETTTTSTEG 719
Query: 491 PQLSAPITTKTDKTS--------TTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLIS 542
+++ T ++ T+ TT S + + + ++T ++
Sbjct: 720 SEITTASITGSETTTASTEGSETTTASTEGSETTSASTTGSETTTASTTSSETTMASIMG 779
Query: 543 PKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDE 602
+ + S + + T S + +E+ T + + + ++ ++ SE I
Sbjct: 780 SETTMAST--IGSETTKVSTASSKMTTVFTENSETTIASTTASETTTVSTAGSETIPAST 837
Query: 603 QKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKA 662
S E T EG + ++ + T E E +T+ SE A
Sbjct: 838 AGS--ETTTTTSTEGSETTT--ASTEGSETTTASTESSETTTATTIGSETTT-------A 886
Query: 663 SPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHS--GRE 720
S E + + + G + T + T SE V G + + E
Sbjct: 887 STEGSETTTTSTE-----------GSETTTAST------EGSEITTVSTTGSETTTASTE 929
Query: 721 GRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGA---TATTSTS 777
G + E S V + TV + T V T S T+A+ A T T ST+
Sbjct: 930 GSETTTASTEGSELTTVSTTGSETITVSAEGSETTTVTTMGSETTTASTAGSETTTVSTA 989
Query: 778 STVTVTAPAP-------AATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPST 830
+ T TA ++TGS + T + + + T E T +T
Sbjct: 990 GSETTTASIEGSETTTVSSTGSETTTVSTTGTETTITSTEGSETTTVTTAGSETTAVYTT 1049
Query: 831 STITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTM 890
+ T TST+ S T S + S ++ ADL T S + T+
Sbjct: 1050 GSETTTTSTEGSETTTVSTTGSETTTASTADLETTTVSTSGSGTTTASTA------GSET 1103
Query: 891 TEIYNDLSKNTTGST 905
T +Y SK TT ST
Sbjct: 1104 TTVYITGSKTTTAST 1118
Score = 47.4 bits (111), Expect = 8e-05
Identities = 133/752 (17%), Positives = 263/752 (34%), Gaps = 87/752 (11%)
Query: 409 PVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKST 468
P +G +S + + +ST S T + A + T++ SE + K +
Sbjct: 187 PSTAGSETTTVSTAGSETTTVSTTGSETTTAST---AHSETTAASTMGSETT-----KVS 238
Query: 469 ASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELS 528
+ + T AGS + + + + T D +TT S + ++
Sbjct: 239 TAGSETTVSTAGSETTAASTEDSETNTAFTE--DSKTTTASTTGFETTAASTTGSEPTMA 296
Query: 529 ESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSE 588
++ ++T I P+ S + + + + + + T V + SE +
Sbjct: 297 STMGSETTMASTIGPETTKVSTASSEVTTVFAAGSETIRASTVGSET-TTVSTTGSETTT 355
Query: 589 KSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPS---AVKKKPKPTNPVEIKEELKS 645
S SE +D S+ TE E E S V T V I + ++
Sbjct: 356 ASIMG-SETSTDSTTGSETTTASTEGSETTTASTEGSEATTVSTTGSETTTVSITDS-ET 413
Query: 646 TSPASEKADPGAVKDKA--SPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSD 703
T+ +E ++ AV + + SE S + + +++ TV +
Sbjct: 414 TTTCTEGSEMTAVSTTVFETTTASTEGSEITIASTSDSETTTASTEGSETTTV---TTAG 470
Query: 704 SESELVIDLGED-----HSGRE-------GRKNKKEPKEPSPKQDVVGKTPPSTTVGSHS 751
SE++ G + ++G E G E S V TTV +
Sbjct: 471 SETKTAYTTGSETTTASNTGLETTTVFTIGSDTTTASTEGSETTAVSATGSEMTTVSTEG 530
Query: 752 PPETPVLTRSSAQTSAAGATATTSTSST----VTVTAPAPAATGSPVKKQRPLLPKETAP 807
T V T S T+ + T+T+ST +T + A T + + TA
Sbjct: 531 SENTTVSTTGSETTTVSTTGLETTTTSTEGSEMTTVSTTGAETTTDSTEGSGTTAASTAG 590
Query: 808 AVQRVVWNS------STVQQKEITQSPSTSTITLVTSTQSSPLVTSS--GSMSTLVSSVN 859
+ V + ++ E T + +T + T ST SS T+S GS +T VS+ +
Sbjct: 591 SETTTVSTADSENTTASTADSETTSASTTGSETTTASTTSSETTTASTEGSETTTVSTTD 650
Query: 860 ADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKL 919
++ + + + + S+ T++ ++ + +T GS + E K+
Sbjct: 651 SETTMVSTTGSERTITSTEGSETT-----TVSATGSETTVSTEGSGTTTVSITGSETTKV 705
Query: 920 QWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCAN 979
+ + E+T A + S + A + ET +
Sbjct: 706 STTGSETTTTSTEGSEITTASITGS-----ETTTASTEGSETTTASTEGSETTSASTTGS 760
Query: 980 CKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSS 1039
++ T S T+ + + + +ET S+ GS
Sbjct: 761 -----------------------------ETTTASTTSSETTMASIMGSETTMASTIGSE 791
Query: 1040 S---STQSAPSETASASKEKETSAEKSKESGSTLDLSGSRETPSSILLGSNQGSDHSRSN 1096
+ ST S+ T + T A + +T+ +GS P+S + + +
Sbjct: 792 TTKVSTASSKMTTVFTENSETTIASTTASETTTVSTAGSETIPASTAGSETTTTTSTEGS 851
Query: 1097 KSSWSSSDEKRGSTRSDHNTSTSTKSLLPKES 1128
+++ +S++ +T S ++ T+T + + E+
Sbjct: 852 ETTTASTEGSETTTASTESSETTTATTIGSET 883
Score = 45.8 bits (107), Expect = 2e-04
Identities = 135/719 (18%), Positives = 240/719 (33%), Gaps = 51/719 (7%)
Query: 412 SGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASP 471
+G +S +D + ST S T + A+++ + S + + +T S
Sbjct: 589 AGSETTTVSTADSENTTASTADSETTSASTTGSETTTASTTSSETTTASTEGSETTTVST 648
Query: 472 ASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESV 531
++T S +GS + + + TT S TGS ++ + S SE+
Sbjct: 649 TDSETTMV-STTGSERTITSTEGSETTT----VSATGSETTVSTEGSGTTTVSITGSETT 703
Query: 532 QQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSD 591
+ +T S + +I + E SE + E S++ + +
Sbjct: 704 KVSTTG----SETTTTSTEGSEITTASITGSETTTASTEGSETTTASTEGSETTSASTTG 759
Query: 592 SSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPV--EIKEELKSTSPA 649
S + + + + +E + E + V V E E +++ A
Sbjct: 760 SETTTASTTSSETTMASIMGSETTMASTIGSETTKVSTASSKMTTVFTENSETTIASTTA 819
Query: 650 SEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELV 709
SE + P SE + + E T S++ +
Sbjct: 820 SETTTVSTAGSETIPASTAG-SETTTTTSTEGSETTTASTEGSETTTASTESSETTTATT 878
Query: 710 IDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAG 769
I + EG + E S + TTV + T T S T+A+
Sbjct: 879 IGSETTTASTEGSETTTTSTEGSETTTASTEGSEITTVSTTGSETTTASTEGSETTTAST 938
Query: 770 -----ATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEI 824
T +T+ S T+TV+A T TA ST +
Sbjct: 939 EGSELTTVSTTGSETITVSAEGSETTTVTTMGSETT----TASTAGSETTTVSTAGSETT 994
Query: 825 TQSPSTSTITLVTSTQS-SPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMM 883
T S S T V+ST S + V+++G+ +T+ S+ ++ T + A YT+
Sbjct: 995 TASIEGSETTTVSSTGSETTTVSTTGTETTITSTEGSETTTVTTAGSETT--AVYTTGSE 1052
Query: 884 DAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQ 943
T TE + +TTGS +E + + E T +
Sbjct: 1053 TTT--TSTEGSETTTVSTTGSETTTASTADLETTTVSTSGSGTTTASTAGSETTTVYITG 1110
Query: 944 SLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAH 1003
S E + V T + A+ + S
Sbjct: 1111 S---------KTTTASTEGSEATTVSTTSSETTTASTTGSEMTTVFTTVS---------- 1151
Query: 1004 WPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSSSTQSAPSETASASKEKETSAEKS 1063
E T + A A T T + S+ +++ST + + TAS + + T+A +
Sbjct: 1152 --ETTTVSTIGSEATTSSAAGSEATTTSTEGSETTTASTAGSETTTASTAGSETTTASTA 1209
Query: 1064 KESGSTLDLSGSRETPSSILLGSNQGSDHSRSNKSSWS---SSDEKRGSTRSDHNTSTS 1119
+T SGS ET ++ GS + S ++++ + S+ ST S T+TS
Sbjct: 1210 GSETTTASTSGS-ETNTACTTGSETSTPSSAGSETNTAFIIGSETTIASTASLEPTATS 1267
Score = 44.7 bits (104), Expect = 5e-04
Identities = 82/400 (20%), Positives = 156/400 (39%), Gaps = 39/400 (9%)
Query: 735 QDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPV 794
+ V TT S + ET +++ ++T+ +TTS+ +TVT TA + T S V
Sbjct: 94 ETTVSTAGSETTTVSITGTETTMVSAMGSETTT---NSTTSSETTVTSTAGSETTTVSTV 150
Query: 795 KKQRP---LLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSM 851
+ ET A S+T + + + TIT T+ + V+++GS
Sbjct: 151 GSETTTAYTADSETTAA-------STTGSEMTTVFTAGSETITPSTAGSETTTVSTAGSE 203
Query: 852 STLVSSVNADLPIAT---ASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGST-IA 907
+T VS+ ++ A+ + A+ + T+K+ A G+ T + S+ T ST +
Sbjct: 204 TTTVSTTGSETTTASTAHSETTAASTMGSETTKVSTA--GSETTVSTAGSETTAASTEDS 261
Query: 908 EIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQA 967
E E K + E T A S + + + + +
Sbjct: 262 ETNTAFTEDSK-------TTTASTTGFETTAA----STTGSEPTMASTMGSETTMASTIG 310
Query: 968 VDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSAT--APQQEADAE 1025
+ TK A+ + +F T + S T +A+ + D+
Sbjct: 311 PETTKVS--TASSEVTTVFAAGSETIRASTVGSETTTVSTTGSETTTASIMGSETSTDST 368
Query: 1026 VNTETLNKSSQGS---SSSTQSAPSETASASKEKETSAEKSKESGSTLDLSGSRET--PS 1080
+ET S++GS ++ST+ + + T S + + T+ + +T GS T +
Sbjct: 369 TGSETTTASTEGSETTTASTEGSEATTVSTTGSETTTVSITDSETTTTCTEGSEMTAVST 428
Query: 1081 SILLGSNQGSDHSRSNKSSWSSSDEKRGSTRSDHNTSTST 1120
++ + ++ S +S S S+ ST T+ +T
Sbjct: 429 TVFETTTASTEGSEITIASTSDSETTTASTEGSETTTVTT 468
Score = 35.8 bits (81), Expect = 0.24
Identities = 91/473 (19%), Positives = 169/473 (35%), Gaps = 24/473 (5%)
Query: 407 SKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDK 466
S+ + TG + + S + S + + + + + T ++S+ + F +
Sbjct: 750 SETTSASTTGSETTTASTTSSETTMASIMGSETTMASTIGSETTKVSTASSKMTTVFTEN 809
Query: 467 STASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGS-ILNLNLDRSKAEMDLK 525
S + AST + ++S + P +A T T TST GS + + S+
Sbjct: 810 SETTIASTTASETTTVSTAGSETIPASTAGSETTTT-TSTEGSETTTASTEGSETTTAST 868
Query: 526 ELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSE 585
E SE+ +T + S + + E + E SE T V + SE
Sbjct: 869 ESSET----TTATTIGSETTTASTEGSETTTTSTEGSETTTASTEGSE--ITTVSTTGSE 922
Query: 586 DSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPS----AVKKKPKPTNPVEIKE 641
+ S + SE + + S+ T E + E S + T
Sbjct: 923 TTTAS-TEGSETTTASTEGSELTTVSTTGSETITVSAEGSETTTVTTMGSETTTASTAGS 981
Query: 642 ELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLD 701
E + S A + +++ + SE S + + + +++ TV
Sbjct: 982 ETTTVSTAGSETTTASIEGSETTTVSSTGSETTTVSTTGTETTITSTEGSETTTV---TT 1038
Query: 702 SDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPP--STTVGSHSPPETPVLT 759
+ SE+ V G + + ++ + + T +TTV + T T
Sbjct: 1039 AGSETTAVYTTGSETTTTSTEGSETTTVSTTGSETTTASTADLETTTVSTSGSGTTTAST 1098
Query: 760 RSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTV 819
S T+ + T+T+ST A + T S + T V V ++TV
Sbjct: 1099 AGSETTTVYITGSKTTTASTEGSEATTVSTTSSETTTASTTGSEMT--TVFTTVSETTTV 1156
Query: 820 QQ--KEITQSPSTSTITLVTSTQSSPLVTSS--GSMSTLVSSVNADLPIATAS 868
E T S + + TST+ S T+S GS +T S+ ++ A+ +
Sbjct: 1157 STIGSEATTSSAAGSEATTTSTEGSETTTASTAGSETTTASTAGSETTTASTA 1209
Score = 34.7 bits (78), Expect = 0.53
Identities = 31/153 (20%), Positives = 67/153 (43%), Gaps = 5/153 (3%)
Query: 744 STTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPK 803
+TT + T T S T+A+ A + T+T+ST + +GS +
Sbjct: 1173 ATTTSTEGSETTTASTAGSETTTASTAGSETTTASTAGSETTTASTSGSETNTACTTGSE 1232
Query: 804 ETAPAVQRVVWNSSTVQQKEITQSPSTS---TITLVTSTQSSPLVTSSGSMSTLVSSVNA 860
+ P+ N++ + E T + + S T T +T ++++ + ++ + ++V++
Sbjct: 1233 TSTPSSAGSETNTAFIIGSETTIASTASLEPTATSLTGSETTTVSITASGATAASTTVSS 1292
Query: 861 DLPIATASADVAADIAKYTSKMMDAIKGTMTEI 893
+ T + DV+ I T+ M + T T +
Sbjct: 1293 TTFVLTKATDVS--IQPITNTPMSGTRTTGTRL 1323
Score = 32.7 bits (73), Expect = 2.0
Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 23/166 (13%)
Query: 744 STTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPK 803
+TTV + S T T S T+ + T+T ST+ A +A GS
Sbjct: 1123 ATTVSTTSSETTTASTTGSEMTTVFTTVSETTTVSTIGSEATTSSAAGSEA--------- 1173
Query: 804 ETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSS--GSMSTLVSSVNAD 861
+++ + E T + + + T ST S T+S GS +T S+ ++
Sbjct: 1174 -----------TTTSTEGSETTTASTAGSETTTASTAGSETTTASTAGSETTTASTSGSE 1222
Query: 862 LPIATASADVAADIAKYTSKMMDA-IKGTMTEIYNDLSKNTTGSTI 906
A + + + S+ A I G+ T I + S T +++
Sbjct: 1223 TNTACTTGSETSTPSSAGSETNTAFIIGSETTIASTASLEPTATSL 1268
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.123 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,938,830
Number of Sequences: 37866
Number of extensions: 2348693
Number of successful extensions: 25052
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 1190
Number of HSP's that attempted gapping in prelim test: 13648
Number of HSP's gapped (non-prelim): 8526
length of query: 1135
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1022
effective length of database: 13,968,660
effective search space: 14275970520
effective search space used: 14275970520
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.