Guide to the Human Genome
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Name: MYEF2 Sequence: fasta or formatted (600aa) NCBI GI: 33620747
Description:

myelin expression factor 2

Referenced in:

hnRNP
Oligodendrocytes and Myelin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         31           1
 C cysteine            0.7          4           1
 D aspartate           5.5         33           2
 E glutamate           6.7         40           2
 F phenylalanine       4.5         27           1
 G glycine            16.3         98           3
 H histidine           1.5          9           1
 I isoleucine          5.3         32           1
 K lysine              7.2         43           2
 L leucine             5.2         31           1
 M methionine          5.8         35           1
 N asparagine          5.0         30           2
 P proline             5.7         34           2
 Q glutamine           2.7         16           2
 R arginine            6.2         37           2
 S serine              8.2         49           4
 T threonine           2.5         15           1
 V valine              4.5         27           2
 W tryptophan          0.5          3           1
 Y tyrosine            1.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myelin expression factor 2 
HNRNPM                0.397   heterogeneous nuclear ribonucleoprotein M isoform a ...
HNRNPM                0.355   heterogeneous nuclear ribonucleoprotein M isoform b...
PABPC3                0.043   poly(A) binding protein, cytoplasmic 3 
PABPC4                0.043   poly A binding protein, cytoplasmic 4 isoform 3 [Ho...
PABPC4                0.043   poly A binding protein, cytoplasmic 4 isoform 2 [Homo...
PABPC4                0.043   poly A binding protein, cytoplasmic 4 isoform 1 [Ho...
PABPC4L               0.043   poly(A) binding protein, cytoplasmic 4-like 
PABPC5                0.041   poly(A) binding protein, cytoplasmic 5 
CUGBP1                0.041   CUG triplet repeat, RNA-binding protein 1 isoform 1 [...
CUGBP1                0.041   CUG triplet repeat, RNA-binding protein 1 isoform 2 ...
PABPC1                0.040   poly(A) binding protein, cytoplasmic 1 
HNRNPA3               0.040   heterogeneous nuclear ribonucleoprotein A3 
FUS                   0.039   fusion (involved in t(12;16) in malignant liposarcoma...
CUGBP1                0.039   CUG triplet repeat, RNA-binding protein 1 isoform 3 ...
PABPC1L               0.038   poly(A)-binding protein, cytoplasmic 1-like 
CUGBP2                0.038   CUG triplet repeat, RNA binding protein 2 isoform 3 ...
CUGBP2                0.038   CUG triplet repeat, RNA binding protein 2 isoform 4...
CUGBP2                0.037   CUG triplet repeat, RNA binding protein 2 isoform 1 ...
CUGBP2                0.037   CUG triplet repeat, RNA binding protein 2 isoform 2...
HNRNPA0               0.036   heterogeneous nuclear ribonucleoprotein A0 
HNRNPA2B1             0.034   heterogeneous nuclear ribonucleoprotein A2/B1 isoform...
TAF15                 0.033   TBP-associated factor 15 isoform 2 
TAF15                 0.033   TBP-associated factor 15 isoform 1 
HNRNPA2B1             0.033   heterogeneous nuclear ribonucleoprotein A2/B1 isofor...
HNRNPA1               0.033   heterogeneous nuclear ribonucleoprotein A1 isoform b...
THOC4                 0.033   THO complex 4 
KRT9                  0.030   keratin 9 
SFRS4                 0.028   splicing factor, arginine/serine-rich 4 
SFRS6                 0.028   arginine/serine-rich splicing factor 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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