Guide to the Human Genome
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Name: HNRNPM Sequence: fasta or formatted (691aa) NCBI GI: 157412270
Description:

heterogeneous nuclear ribonucleoprotein M isoform b

Referenced in:

hnRNP

Other entries for this name:
alt prot [730aa] heterogeneous nuclear ribonucleoprotein M isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         57           3
 C cysteine            0.7          5           1
 D aspartate           3.6         25           1
 E glutamate           9.0         62           3
 F phenylalanine       3.5         24           2
 G glycine            17.8        123           7
 H histidine           1.3          9           1
 I isoleucine          4.8         33           2
 K lysine              5.8         40           2
 L leucine             5.8         40           2
 M methionine          8.5         59           2
 N asparagine          3.9         27           2
 P proline             4.6         32           2
 Q glutamine           1.9         13           2
 R arginine            7.8         54           2
 S serine              4.5         31           2
 T threonine           1.6         11           1
 V valine              5.5         38           3
 W tryptophan          0.4          3           1
 Y tyrosine            0.7          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heterogeneous nuclear ribonucleoprotein M isoform b... 
HNRNPM                0.985   heterogeneous nuclear ribonucleoprotein M isoform a ...
MYEF2                 0.306   myelin expression factor 2 
PABPC5                0.043   poly(A) binding protein, cytoplasmic 5 
PABPC1L               0.042   poly(A)-binding protein, cytoplasmic 1-like 
PABPC4                0.042   poly A binding protein, cytoplasmic 4 isoform 3 [Ho...
PABPC4                0.042   poly A binding protein, cytoplasmic 4 isoform 2 [Homo...
PABPC4                0.042   poly A binding protein, cytoplasmic 4 isoform 1 [Ho...
PABPC4L               0.041   poly(A) binding protein, cytoplasmic 4-like 
PABPC1                0.040   poly(A) binding protein, cytoplasmic 1 
PABPC3                0.040   poly(A) binding protein, cytoplasmic 3 
HNRNPA0               0.038   heterogeneous nuclear ribonucleoprotein A0 
NCL                   0.033   nucleolin 
SART3                 0.031   squamous cell carcinoma antigen recognized by T cells...
SF3B4                 0.029   splicing factor 3b, subunit 4 
HNRNPD                0.029   heterogeneous nuclear ribonucleoprotein D isoform a ...
HNRNPD                0.027   heterogeneous nuclear ribonucleoprotein D isoform b ...
HNRNPA2B1             0.026   heterogeneous nuclear ribonucleoprotein A2/B1 isofor...
HNRNPA2B1             0.026   heterogeneous nuclear ribonucleoprotein A2/B1 isoform...
HNRNPD                0.026   heterogeneous nuclear ribonucleoprotein D isoform c ...
TAF15                 0.026   TBP-associated factor 15 isoform 2 
TAF15                 0.026   TBP-associated factor 15 isoform 1 
SFRS4                 0.025   splicing factor, arginine/serine-rich 4 
HNRNPA1L2             0.025   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
HNRNPA1L2             0.025   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
ELAVL2                0.024   ELAV (embryonic lethal, abnormal vision, Drosophila...
HNRNPA1               0.024   heterogeneous nuclear ribonucleoprotein A1 isoform a ...
MSI2                  0.024   musashi 2 isoform a 
HNRNPA3               0.024   heterogeneous nuclear ribonucleoprotein A3 
HNRNPD                0.023   heterogeneous nuclear ribonucleoprotein D isoform d ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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