PABPC1L 9910

Name: PABPC1L	Sequence: fasta or formatted (614aa)		NCBI GI: 185135971
Description: poly(A)-binding protein, cytoplasmic 1-like		Referenced in: Polyadenylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 50 3 C cysteine 1.8 11 2 D aspartate 3.9 24 3 E glutamate 6.0 37 2 F phenylalanine 3.9 24 1 G glycine 7.0 43 2 H histidine 3.1 19 1 I isoleucine 3.7 23 1 K lysine 5.0 31 1 L leucine 8.3 51 3 M methionine 3.7 23 1 N asparagine 3.7 23 1 P proline 6.8 42 2 Q glutamine 5.9 36 2 R arginine 6.8 42 2 S serine 7.0 43 2 T threonine 4.9 30 2 V valine 6.7 41 2 W tryptophan 0.3 2 1 Y tyrosine 3.1 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 poly(A)-binding protein, cytoplasmic 1-like PABPC1 0.676 poly(A) binding protein, cytoplasmic 1 PABPC4 0.639 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.631 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC4 0.631 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... PABPC3 0.629 poly(A) binding protein, cytoplasmic 3 PABPC4L 0.382 poly(A) binding protein, cytoplasmic 4-like PABPC5 0.340 poly(A) binding protein, cytoplasmic 5 PABPC1L2B 0.225 poly(A) binding protein, cytoplasmic 1-like 2B [Hom... PABPC1L2A 0.225 poly(A) binding protein, cytoplasmic 1-like 2A [Homo... ELAVL1 0.081 ELAV-like 1 ELAVL2 0.079 ELAV (embryonic lethal, abnormal vision, Drosophila... ELAVL3 0.076 ELAV-like protein 3 isoform 2 ELAVL4 0.074 ELAV-like 4 isoform 5 ELAVL4 0.074 ELAV-like 4 isoform 4 ELAVL4 0.074 ELAV-like 4 isoform 3 ELAVL4 0.074 ELAV-like 4 isoform 2 ELAVL3 0.073 ELAV-like protein 3 isoform 1 SF3B4 0.070 splicing factor 3b, subunit 4 TIAL1 0.067 TIA-1 related protein isoform 1 ELAVL4 0.066 ELAV-like 4 isoform 1 TIA1 0.065 TIA1 protein isoform 1 LOC100291776 0.064 PREDICTED: similar to poly(A) binding protein, cyto... TIAL1 0.063 TIA-1 related protein isoform 2 TIA1 0.061 TIA1 protein isoform 2 NCL 0.055 nucleolin PUF60 0.054 poly-U binding splicing factor 60KDa isoform c [Hom... PUF60 0.054 poly-U binding splicing factor 60KDa isoform a [Homo... RBMS2 0.052 RNA binding motif, single stranded interacting protei... RBMS1 0.050 RNA binding motif, single stranded interacting protei... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.