Guide to the Human Genome
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Search of human proteins with 33457350

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]
         (571 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]         1183   0.0  
gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]        1168   0.0  
gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]        1168   0.0  
gi|209977067 OTU domain containing 5 isoform c [Homo sapiens]         709   0.0  
gi|223941923 OTU domain containing 1 [Homo sapiens]                    72   2e-12
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]      67   3e-11
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    61   2e-09
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]      60   4e-09
gi|73476377 LBXCOR1 homolog [Homo sapiens]                             60   4e-09
gi|126352608 elastin isoform e precursor [Homo sapiens]                59   1e-08
gi|126352446 elastin isoform d precursor [Homo sapiens]                59   1e-08
gi|126352322 elastin isoform c precursor [Homo sapiens]                59   1e-08
gi|126352700 elastin isoform b precursor [Homo sapiens]                59   1e-08
gi|126352440 elastin isoform a precursor [Homo sapiens]                59   1e-08
gi|59806361 hypothetical protein LOC387104 [Homo sapiens]              59   1e-08
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]                     58   2e-08
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]                     58   2e-08
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]       58   3e-08
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]                58   3e-08
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom...    57   3e-08
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom...    57   3e-08
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s...    57   5e-08
gi|149192871 OTU domain containing 3 [Homo sapiens]                    57   6e-08
gi|48762934 alpha 2 type I collagen [Homo sapiens]                     56   8e-08
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]         56   8e-08
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]     56   8e-08
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     56   8e-08
gi|73486666 alpha 1 type IX collagen isoform 1 precursor [Homo s...    55   1e-07
gi|73486664 alpha 1 type IX collagen isoform 2 precursor [Homo s...    55   1e-07
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre...    55   1e-07

>gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]
          Length = 571

 Score = 1183 bits (3061), Expect = 0.0
 Identities = 571/571 (100%), Positives = 571/571 (100%)

Query: 1   MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
           MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR
Sbjct: 1   MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60

Query: 61  PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120
           PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA
Sbjct: 61  PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120

Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180
           AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE
Sbjct: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180

Query: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240
           YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH
Sbjct: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240

Query: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300
           EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ
Sbjct: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300

Query: 301 YSTGTSAVEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFA 360
           YSTGTSAVEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFA
Sbjct: 301 YSTGTSAVEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFA 360

Query: 361 EQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQ 420
           EQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQ
Sbjct: 361 EQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQ 420

Query: 421 VRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGT 480
           VRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGT
Sbjct: 421 VRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGT 480

Query: 481 VLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDE 540
           VLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDE
Sbjct: 481 VLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDE 540

Query: 541 ILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 571
           ILASVLAVSQQEYLDSMKKNKVHRDPPPDKS
Sbjct: 541 ILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 571


>gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]
          Length = 566

 Score = 1168 bits (3022), Expect = 0.0
 Identities = 566/571 (99%), Positives = 566/571 (99%), Gaps = 5/571 (0%)

Query: 1   MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
           MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR
Sbjct: 1   MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60

Query: 61  PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120
           PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA
Sbjct: 61  PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120

Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180
           AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE
Sbjct: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180

Query: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240
           YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH
Sbjct: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240

Query: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300
           EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ
Sbjct: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300

Query: 301 YSTGTSAVEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFA 360
           YST     EPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFA
Sbjct: 301 YST-----EPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFA 355

Query: 361 EQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQ 420
           EQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQ
Sbjct: 356 EQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQ 415

Query: 421 VRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGT 480
           VRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGT
Sbjct: 416 VRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGT 475

Query: 481 VLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDE 540
           VLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDE
Sbjct: 476 VLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDE 535

Query: 541 ILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 571
           ILASVLAVSQQEYLDSMKKNKVHRDPPPDKS
Sbjct: 536 ILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 566


>gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]
          Length = 566

 Score = 1168 bits (3022), Expect = 0.0
 Identities = 566/571 (99%), Positives = 566/571 (99%), Gaps = 5/571 (0%)

Query: 1   MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
           MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR
Sbjct: 1   MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60

Query: 61  PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120
           PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA
Sbjct: 61  PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120

Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180
           AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE
Sbjct: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDE 180

Query: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240
           YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH
Sbjct: 181 YEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMH 240

Query: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300
           EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ
Sbjct: 241 EVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQ 300

Query: 301 YSTGTSAVEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFA 360
           YST     EPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFA
Sbjct: 301 YST-----EPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSFKPGFA 355

Query: 361 EQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQ 420
           EQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQ
Sbjct: 356 EQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQ 415

Query: 421 VRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGT 480
           VRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGT
Sbjct: 416 VRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRSSASSPEHPELHAELGMKPPSPGT 475

Query: 481 VLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDE 540
           VLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDE
Sbjct: 476 VLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPALECRALIQQMSPSAFGLNDWDDDE 535

Query: 541 ILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 571
           ILASVLAVSQQEYLDSMKKNKVHRDPPPDKS
Sbjct: 536 ILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 566


>gi|209977067 OTU domain containing 5 isoform c [Homo sapiens]
          Length = 349

 Score =  709 bits (1831), Expect = 0.0
 Identities = 349/354 (98%), Positives = 349/354 (98%), Gaps = 5/354 (1%)

Query: 218 MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN 277
           MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN
Sbjct: 1   MKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNN 60

Query: 278 CHGNHIEMQAMAEMYNRPVEVYQYSTGTSAVEPINTFHGIHQNEDEPIRVSYHRNIHYNS 337
           CHGNHIEMQAMAEMYNRPVEVYQYST     EPINTFHGIHQNEDEPIRVSYHRNIHYNS
Sbjct: 61  CHGNHIEMQAMAEMYNRPVEVYQYST-----EPINTFHGIHQNEDEPIRVSYHRNIHYNS 115

Query: 338 VVNPNKATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEA 397
           VVNPNKATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEA
Sbjct: 116 VVNPNKATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEA 175

Query: 398 IEEQVARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRS 457
           IEEQVARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRS
Sbjct: 176 IEEQVARESYLQWLRDQEKQARQVRGPSQPRKASATCSSATAAASSGLEEWTSRSPRQRS 235

Query: 458 SASSPEHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPAL 517
           SASSPEHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPAL
Sbjct: 236 SASSPEHPELHAELGMKPPSPGTVLALAKPPSPCAPGTSSQFSAGADRATSPLVSLYPAL 295

Query: 518 ECRALIQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 571
           ECRALIQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS
Sbjct: 296 ECRALIQQMSPSAFGLNDWDDDEILASVLAVSQQEYLDSMKKNKVHRDPPPDKS 349


>gi|223941923 OTU domain containing 1 [Homo sapiens]
          Length = 481

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 67/240 (27%), Positives = 100/240 (41%), Gaps = 17/240 (7%)

Query: 102 PCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAV 161
           P   PG P  GPG       A  G  G   G       G  C  PG    RR  P   A 
Sbjct: 210 PAATPGSPDPGPGPWGEEHLAERGPRGWERG-------GDRCDAPGGDAARRPDPEAEAP 262

Query: 162 GGGSPEREEVGAGYNSEDEYEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKED 221
             GS E     A                A+  A VE+Q+ +  +  R+K  F I     D
Sbjct: 263 PAGSIEAAPSSAAEPVIVSRSDPRDEKLALYLAEVEKQDKYLRQ--RNKYRFHIIP---D 317

Query: 222 GACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGN 281
           G CL+RAV+  VYGDQ +H  +R+  + Y+  + D+FS  +  D   +I    ++     
Sbjct: 318 GNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWAG 377

Query: 282 HIEMQAMAEMYNRPVEVYQYSTGTSAVEPINT---FHGIHQNEDEPIRVSYHRNIHYNSV 338
           + E+ AM +M N  V ++  + G      ++T   + G   +    I +S+  N HY++V
Sbjct: 378 YPELLAMGQMLN--VNIHLTTGGRLESPTVSTMIHYLGPEDSLRPSIWLSWLSNGHYDAV 435


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 65/181 (35%), Positives = 71/181 (39%), Gaps = 18/181 (9%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPR 62
           P  K  P DA    +  PPGP  PA   G  G VG  G     G       +G  GA  R
Sbjct: 823 PGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGR 882

Query: 63  ASPP-PQGPL--PGPPGALHRWALAVPPGAVAGP--RPQQASPPPCGGPGGPGGGPGDAL 117
             PP P G    PGPPG   +     P G   GP  RP +  PP   GP G  G PG   
Sbjct: 883 VGPPGPSGNAGPPGPPGPAGKEGGKGPRGET-GPAGRPGEVGPPGPPGPAGEKGSPGADG 941

Query: 118 GAAAAGV-GAAGV-----VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEV 171
            A A G  G  G+     VVG+ G  G  G    PG S      PG     G S ER   
Sbjct: 942 PAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGE----PGKQGPSGASGERGPP 997

Query: 172 G 172
           G
Sbjct: 998 G 998



 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 53/151 (35%), Positives = 62/151 (41%), Gaps = 13/151 (8%)

Query: 5   PKKKPPPPDADPANEPPPPGPM--PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-P 61
           P  + P     P   P P G    P AP   G  G  G    VG       +G  G R  
Sbjct: 412 PGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGA 471

Query: 62  RASPPPQGPLPGPPGALHRWALAVPPGA--VAGPRP---QQASPPPCGGPGGPGGGPGDA 116
           R  P P G LPGPPG          PGA  VAGP+    ++ SP    GP GP G PG+A
Sbjct: 472 RGEPGPTG-LPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSP----GPAGPKGSPGEA 526

Query: 117 LGAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147
                AG+  A  + G  G+ G  G    PG
Sbjct: 527 GRPGEAGLPGAKGLTGSPGSPGPDGKTGPPG 557



 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 50/158 (31%), Positives = 56/158 (35%), Gaps = 3/158 (1%)

Query: 9   PPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQ 68
           PP  D  P     P  P PP P    G+G         G D     G+    P     P+
Sbjct: 128 PPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPR 187

Query: 69  GPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAG 128
           G LPGPPGA        PPG      P  + P    GP GP G  GD   A   G     
Sbjct: 188 G-LPGPPGAPGPQGFQGPPGEPG--EPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGER 244

Query: 129 VVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
              G  GA G+ G    PG    R  +   GA G   P
Sbjct: 245 GPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGP 282



 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 58/178 (32%), Positives = 65/178 (36%), Gaps = 35/178 (19%)

Query: 19  EPPPPGPMPPA-----PRRGGGVGVGG--GGTGVGGGDRDRDSGVVGARPRASPPPQGPL 71
           EP PPGP   A     P   G  G  G  G  G+ G       G  GAR  + P   G  
Sbjct: 372 EPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAP-----GFPGARGPSGPQGPGGP 426

Query: 72  PGP---------PGALHRWALAVPPGAVA-----------GPRPQQASPPPCGGPGGPG- 110
           PGP         PG+         PG V            G R  +  P P G PG PG 
Sbjct: 427 PGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGE 486

Query: 111 -GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG-GGSP 166
            GGPG      A GV       G  G+ G  G    PG + R  +A   GA G  GSP
Sbjct: 487 RGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSP 544



 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 59/172 (34%), Positives = 62/172 (36%), Gaps = 16/172 (9%)

Query: 9   PPPPDADPAN-----EPPPPG-PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPR 62
           PP P  +        EP P G P PP  R G G     G  GV G       G  G R  
Sbjct: 459 PPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAG-----PKGPAGER-- 511

Query: 63  ASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA 122
            SP P GP  G PG   R   A  PGA  G      SP P G  G PG    D       
Sbjct: 512 GSPGPAGP-KGSPGEAGRPGEAGLPGA-KGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPG 569

Query: 123 GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174
             GA G   GV G  G  G    PG +  R      GAVG    + E    G
Sbjct: 570 PPGARG-QAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQG 620



 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 60/183 (32%), Positives = 65/183 (35%), Gaps = 25/183 (13%)

Query: 9   PPPPDADPAN--EPPPPGPMPPAPRRG-----------GGVGVGGGGTGVGGGDRDRDSG 55
           PP P   P +  E  P GP  P   RG           G  G  G     G      + G
Sbjct: 771 PPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPG 830

Query: 56  VVGARPRASPP-PQGPL--PGP------PGALHRWALAVPPGAVAGP-RPQQASPPPCGG 105
             GA+  A PP P GP   PGP      PGA      A PPGA   P    +  PP   G
Sbjct: 831 DAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSG 890

Query: 106 PGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPG-VGAVGGG 164
             GP G PG A      G        G  G VG  G   GP   K    A G  GA G  
Sbjct: 891 NAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPG-PPGPAGEKGSPGADGPAGAPGTP 949

Query: 165 SPE 167
            P+
Sbjct: 950 GPQ 952



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 57/186 (30%), Positives = 68/186 (36%), Gaps = 34/186 (18%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
           P  K  PP   PA +   PGP  P   RG    +G  G     G+  +      A  R  
Sbjct: 549 PDGKTGPP--GPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGK------AGERGV 600

Query: 65  PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPG-----GPGGGPGDALGA 119
           P P G + GP G         PPG  AGP  ++    P G PG     GP G PG+A   
Sbjct: 601 PGPPGAV-GPAGKDGEAGAQGPPGP-AGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKP 658

Query: 120 AAAGV----GAAGV--------------VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAV 161
              GV    GA G               V G  G  G  G    PG+   +  A   GA 
Sbjct: 659 GEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAP 718

Query: 162 GG-GSP 166
           G  G+P
Sbjct: 719 GSQGAP 724



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 63/213 (29%), Positives = 75/213 (35%), Gaps = 50/213 (23%)

Query: 7   KKPPPPDADPANEPPPPGPMP----------PAPR-------RGGGVGVGGGGTGVGGGD 49
           K  PP  A     P PPGP            P P+       + G  GV G    VG   
Sbjct: 552 KTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAG 611

Query: 50  RDRDSGVVG----ARPRASPPPQGP--------LP---GPPGALHRWALAVPPGAVAGPR 94
           +D ++G  G    A P      QGP        LP   GPPG   +      PG +  P 
Sbjct: 612 KDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPG 671

Query: 95  PQQA-------------SPPPCGGPGGPGGGPGD--ALG-AAAAGVGAAGVVVGVGGAVG 138
           P  A              PP   GP G  G PG+  A G A A G   +    G+ G  G
Sbjct: 672 PSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPG 731

Query: 139 VGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEV 171
             G    PG    R  A   GA   GSP ++ V
Sbjct: 732 ERGAAGLPGPKGDRGDAGPKGA--DGSPGKDGV 762



 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 67/208 (32%), Positives = 74/208 (35%), Gaps = 39/208 (18%)

Query: 5   PKKKPPPPDADPA----------NEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDR 52
           PK +P  P  + A           E   PG   PA  RG  G  G  G     G      
Sbjct: 285 PKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPG 344

Query: 53  DSGVVGAR-------PRASPPPQGPL--PGPPGALHRWALAVPPGAVAGP-------RPQ 96
             G VGA+       PR S  PQG    PGPPG       A  PGA   P        P 
Sbjct: 345 FPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPG 404

Query: 97  QASPP-------PCG--GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147
            A  P       P G  GPGGP G  G++    A G        G  G VGV G   GP 
Sbjct: 405 IAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQG-PPGPA 463

Query: 148 HSKRRRQAPG-VGAVGGGSPEREEVGAG 174
             + +R A G  G  G   P  E  G G
Sbjct: 464 GEEGKRGARGEPGPTGLPGPPGERGGPG 491



 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 55/188 (29%), Positives = 60/188 (31%), Gaps = 28/188 (14%)

Query: 10   PPPDADPANEPP--------PPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGA 59
            P P  +P  + P        PPGPM P    G  G  G  G     G   RD   G  G 
Sbjct: 976  PGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGD 1035

Query: 60   RPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCG--------GPGGPGG 111
            R    P      PG PGA       V P   +G R +     P G        GP GP G
Sbjct: 1036 RGETGPAGPPGAPGAPGA----PGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQG 1091

Query: 112  GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEV 171
              GD       G        G  G  G  G    PG      Q P  GA G   P     
Sbjct: 1092 PRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPG-----EQGPS-GASGPAGPRGPPG 1145

Query: 172  GAGYNSED 179
             AG   +D
Sbjct: 1146 SAGAPGKD 1153



 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 56/181 (30%), Positives = 61/181 (33%), Gaps = 16/181 (8%)

Query: 4   LPKKKPPPPDADPANEPPPPG---------PM-PPAPRRGGGVGVGGGGTGVGGGDRDRD 53
           LP  K    DA P      PG         P+ PP P    G     G +G  G    R 
Sbjct: 738 LPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGAR- 796

Query: 54  SGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCG--GPGGPGG 111
            G  G R    PP      GPPGA  +      PG  AG +     P P G  GP GP G
Sbjct: 797 -GAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGD-AGAKGDAGPPGPAGPAGPPGPIG 854

Query: 112 GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEV 171
             G      A G        G  GA G  G   GP  +      PG     GG   R E 
Sbjct: 855 NVGAPGAKGARGSAGPPGATGFPGAAGRVG-PPGPSGNAGPPGPPGPAGKEGGKGPRGET 913

Query: 172 G 172
           G
Sbjct: 914 G 914



 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 59/182 (32%), Positives = 66/182 (36%), Gaps = 28/182 (15%)

Query: 5   PKKKPPPPDA-------DPANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSG 55
           P+  P PP A        P  EP  PG   P   RG  G  G  G     G   R  + G
Sbjct: 186 PRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERG 245

Query: 56  VVGARPRASPPPQGPLPGPPGALHRWAL----AVPPGAVAGPRPQQASPPPCGGPG--GP 109
             G +     P    LPG  G  HR       A      AGP+ +  SP   G PG  GP
Sbjct: 246 PPGPQGARGLPGTAGLPGMKG--HRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGP 303

Query: 110 GGGPGDALGAAAAG-VGAAG--VVVGVGGAVGVGGCCSGPGHSKRRRQAPG-VGAVGGGS 165
            G PG+     A G  GA G     G  G  G  G    PG        PG VGA G   
Sbjct: 304 RGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGF-------PGAVGAKGEAG 356

Query: 166 PE 167
           P+
Sbjct: 357 PQ 358



 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 54/200 (27%), Positives = 64/200 (32%), Gaps = 27/200 (13%)

Query: 22  PPGPMPP-----APRRGGGVGVGG--------GGTGVGGGDRDRDS----GVVGARPRAS 64
           PPGP  P     AP   G  G  G        G  G+ G   +R +    G  G R  A 
Sbjct: 690 PPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAG 749

Query: 65  PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPP-----PCGGPGGPG-----GGPG 114
           P      PG  G         PPG    P  +  S P     P G  G PG     G PG
Sbjct: 750 PKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPG 809

Query: 115 DALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174
            A  A   G        G  G  G  G    PG +        +G VG    +     AG
Sbjct: 810 PAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAG 869

Query: 175 YNSEDEYEAAAARIEAMDPA 194
                 +  AA R+    P+
Sbjct: 870 PPGATGFPGAAGRVGPPGPS 889



 Score = 40.4 bits (93), Expect = 0.004
 Identities = 52/179 (29%), Positives = 63/179 (35%), Gaps = 17/179 (9%)

Query: 16  PANEPPPPGPMPP--APRRGGGVGVGG--GGTGVGG--GDRDRDSGVVGARPRASPPPQG 69
           PA E   PGP  P  +P   G  G  G  G  G+ G  G    D       P       G
Sbjct: 507 PAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPG 566

Query: 70  PLPGPPGALHRWALAVPPGAV-AGPRPQQASPPPCGGPGGPGGGPGDALGAAAAG----V 124
           P PGPPGA  +  +   PG   A   P +A      GP G  G  G    A A G     
Sbjct: 567 P-PGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPA 625

Query: 125 GAAGV-----VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSE 178
           G AG        G  G  G+ G    PG + +  +    G +G   P       G+  E
Sbjct: 626 GPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGE 684



 Score = 40.0 bits (92), Expect = 0.006
 Identities = 48/149 (32%), Positives = 55/149 (36%), Gaps = 47/149 (31%)

Query: 11   PPDADPANEPPPPGPMPPAPRRG-----GGVGVGG-----GGTGVGG-----GDRDR--- 52
            PP A  A  P  PGP+ PA + G     G  G  G     G  G  G     GD+     
Sbjct: 1044 PPGAPGA--PGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGE 1101

Query: 53   --DSGVVGAR----------PRASPPPQGPL-----------PGPPGALHRWALAVPPGA 89
              D G+ G R          P  SP  QGP            PG  GA  +  L   PG 
Sbjct: 1102 QGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGP 1161

Query: 90   VA--GPRPQQASPPPCGGPG--GPGGGPG 114
            +   GPR +     P G PG  GP G PG
Sbjct: 1162 IGPPGPRGRTGDAGPVGPPGPPGPPGPPG 1190



 Score = 38.9 bits (89), Expect = 0.013
 Identities = 30/79 (37%), Positives = 34/79 (43%), Gaps = 13/79 (16%)

Query: 9    PPPPDADPANEPP-----PPGPMPP-----APRRGGGVGVGGGGTGVGGGDRDRDSGVVG 58
            PP P   P  + P     P GP  P     AP + G  G+ G     G   R  D+G VG
Sbjct: 1119 PPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVG 1178

Query: 59   ARPRASPPPQGPLPGPPGA 77
              P   P P GP PGPP A
Sbjct: 1179 --PPGPPGPPGP-PGPPSA 1194



 Score = 36.6 bits (83), Expect = 0.064
 Identities = 43/132 (32%), Positives = 47/132 (35%), Gaps = 27/132 (20%)

Query: 43  TGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP 102
           TGV G   D  +G  G R  A PP +  +PG PG      L  PPG           PP 
Sbjct: 108 TGVEGPKGD--TGPRGPRGPAGPPGRDGIPGQPG------LPGPPG-----------PPG 148

Query: 103 CGGPGGPGGGPGDALGAAAAGVGAAGV-VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAV 161
             GP G GG     L          G+ V G  G  G  G    PG       APG    
Sbjct: 149 PPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPG-------APGPQGF 201

Query: 162 GGGSPEREEVGA 173
            G   E  E GA
Sbjct: 202 QGPPGEPGEPGA 213


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 60/217 (27%), Positives = 76/217 (35%), Gaps = 49/217 (22%)

Query: 6   KKKPPPPDADPANEPPPPGP----------MPPAPRRGGGVGV----GGGGTGVGGGDRD 51
           +++ PPP   P  +PPP  P           PP P +     V     G   GVG     
Sbjct: 68  QQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPA 127

Query: 52  RDSGVVGARPRASPPP---QGPLPGPPGALHRWALAVPPGA----------------VAG 92
             S      P +  PP    GP P PP A+     + PPGA                  G
Sbjct: 128 SSSAPPATPPTSGAPPGSGPGPTPTPPPAV----TSAPPGAPPPTPPSSGVPTTPPQAGG 183

Query: 93  PRPQQASPPPCG-------GPGGPGGG--PGDALGAAAAGVGAAG---VVVGVGGAVGVG 140
           P P  A+ P  G       GPGGP GG  PG        G+   G        GG    G
Sbjct: 184 PPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRG 243

Query: 141 GCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNS 177
           G    P + ++  Q P  G  GG S E+     G+ +
Sbjct: 244 GRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKA 280



 Score = 36.6 bits (83), Expect = 0.064
 Identities = 35/96 (36%), Positives = 40/96 (41%), Gaps = 27/96 (28%)

Query: 2   TILPKK--KPPPPDADPANEPPP---PGP-------MPPAPRRGGGVGVGGGGTGVGGGD 49
           T  P+    PPPP A P   P P   PGP       MP  P+ GGG G+    +  GG  
Sbjct: 176 TTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGL----STPGGHP 231

Query: 50  RDRDSGVVGARPRAS----PP-----PQGPLPGPPG 76
           +    G  G  PR      PP      QGP PG PG
Sbjct: 232 KPPHRG--GGEPRGGRQHHPPYHQQHHQGPPPGGPG 265



 Score = 33.9 bits (76), Expect = 0.41
 Identities = 47/144 (32%), Positives = 49/144 (34%), Gaps = 19/144 (13%)

Query: 33  GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG--------PPGALHRWALA 84
           GGG    GGG G  GG  D  S   G     +  P GP PG        PP   H+    
Sbjct: 13  GGGFHRRGGGGG-RGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQ 71

Query: 85  VPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCS 144
            PP     P PQQ  PPP   P  P                   V  G G A GVG   S
Sbjct: 72  PPP---QQPPPQQ--PPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVG---S 123

Query: 145 GPGHSKRRRQA--PGVGAVGGGSP 166
            P  S     A  P  GA  G  P
Sbjct: 124 APPASSSAPPATPPTSGAPPGSGP 147


>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
          Length = 1466

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 61/167 (36%), Positives = 69/167 (41%), Gaps = 27/167 (16%)

Query: 22  PPG----PMPPAPRRGGGVGVGGGGTGVGGGDRDRD----SGVVGARPRASPP-PQGP-- 70
           PPG    P  P P+   G     GG G  G   +R     +G  G R  A PP P+G   
Sbjct: 649 PPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKG 708

Query: 71  LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG--GGPGDALGAAAAGVGAAG 128
             GPPG         PPGA AG    Q  P   GG G PG  G  G+  G  A GV    
Sbjct: 709 AAGPPG---------PPGA-AGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKD 758

Query: 129 VVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG--GSP-EREEVG 172
              G  G +G  G    PG  K    APG+  + G  GSP ER E G
Sbjct: 759 GPRGPTGPIGPPGPAGQPG-DKGEGGAPGLPGIAGPRGSPGERGETG 804



 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 50/158 (31%), Positives = 57/158 (36%), Gaps = 17/158 (10%)

Query: 10  PPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQG 69
           PP  A P     P GP  P   +G     GG G           +G  GAR    PP   
Sbjct: 838 PPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGA----------AGFPGARGLPGPPGSN 887

Query: 70  PLPGPPGALHRWALAVPPGAVAGPRPQQASP--PPCGGPGGPGGGPGDALGAAAAGVGAA 127
             PGPPG         PPG    P     +P  P   GP G  G PG+     A G   A
Sbjct: 888 GNPGPPGPSGSPGKDGPPG----PAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGA 943

Query: 128 GVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGS 165
              +G+ G  G  G    PG     R +PG   V G S
Sbjct: 944 PGPLGIAGITGARGLAGPPG-MPGPRGSPGPQGVKGES 980



 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 53/162 (32%), Positives = 60/162 (37%), Gaps = 14/162 (8%)

Query: 23  PGPMPP--APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHR 80
           PGPM P  AP   G  G+ G   G  G D  R S      P   PP     PG PGA   
Sbjct: 296 PGPMGPRGAPGERGRPGLPGAA-GARGNDGARGSDGQPGPP--GPPGTAGFPGSPGAKGE 352

Query: 81  WALAVPPGAVAGPRPQQASPPPCG--------GPGGPGGGPGDALGAAAAGVGAAGVVVG 132
              A  PG+   P  Q+  P P G        GP G  G PG       AG+  A  ++G
Sbjct: 353 VGPAGSPGSNGAP-GQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMG 411

Query: 133 VGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174
             G  G  G    PG      +    GA G   P  E   AG
Sbjct: 412 ARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAG 453



 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 54/174 (31%), Positives = 61/174 (35%), Gaps = 23/174 (13%)

Query: 8   KPPPPDAD-PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP- 65
           KP PP +   +  P PPGP  P  + G     G  G     G      G  G  P+  P 
Sbjct: 550 KPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPG 609

Query: 66  -----PPQGPLPGPPGALHRWALAVPPG--------AVAGPRPQQASPPPCGGPGGPGGG 112
                 PQGP PGP G         PPG           GP P +   P   GP G  G 
Sbjct: 610 KNGETGPQGP-PGPTGPGGDKGDTGPPGPQGLQGLPGTGGP-PGENGKPGEPGPKGDAGA 667

Query: 113 PGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
           PG   G   AG        G+ GA G+ G    PG         G GA G   P
Sbjct: 668 PGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPG------PEGGKGAAGPPGP 715



 Score = 52.8 bits (125), Expect = 9e-07
 Identities = 59/194 (30%), Positives = 70/194 (36%), Gaps = 27/194 (13%)

Query: 19  EPPPPGP-----MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG 73
           +P PPGP      P +P   G VG  G     G   +  + G  G      PP    + G
Sbjct: 331 QPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPPGING 390

Query: 74  PPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG--GGPGDALGAAAAGV------- 124
            PG       A  PGA  G    +  P P G  G PG  GG G+     A G        
Sbjct: 391 SPGGKGEMGPAGIPGA-PGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGER 449

Query: 125 GAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG----AGYNSEDE 180
           G AG + GV GA G  G    PG        PG   + G + ER   G    AG N    
Sbjct: 450 GEAG-IPGVPGAKGEDGKDGSPGE-------PGANGLPGAAGERGAPGFRGPAGPNGIPG 501

Query: 181 YEAAAARIEAMDPA 194
            +  A    A  PA
Sbjct: 502 EKGPAGERGAPGPA 515



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 59/177 (33%), Positives = 65/177 (36%), Gaps = 26/177 (14%)

Query: 9   PPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGA--------- 59
           PP P+        PPGP P A    G  G+ G   G+G      D G  G          
Sbjct: 700 PPGPEGGKG-AAGPPGP-PGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGK 757

Query: 60  -RPRASPPPQGPLPGPPGALHRWALAVPPG--AVAGP------RPQQASPPPCGGPGGPG 110
             PR    P GP PGP G          PG   +AGP      R +   P P G PG PG
Sbjct: 758 DGPRGPTGPIGP-PGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPG 816

Query: 111 --GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHS--KRRRQAP-GVGAVG 162
             G PG      A G    G   GV G  G  G    PG    K  R +P G GA G
Sbjct: 817 QNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAG 873



 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 55/171 (32%), Positives = 65/171 (38%), Gaps = 18/171 (10%)

Query: 9    PPPPDADPANEPPPPGPMPPAPRRGGGVGVGG-----GGTGVGGGDRDRDSGVVGARPRA 63
            P PP ++    P PPGP   +P + G  G  G     G  GV G   D         P A
Sbjct: 881  PGPPGSNG--NPGPPGP-SGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGA 937

Query: 64   SPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA 122
              PP  P P G  G      LA PPG + GPR    SP P G  G  G    + L     
Sbjct: 938  QGPPGAPGPLGIAGITGARGLAGPPG-MPGPR---GSPGPQGVKGESGKPGANGLSGERG 993

Query: 123  GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGA 173
              G  G + G+ G  G  G    PG        PG     GG  +R E G+
Sbjct: 994  PPGPQG-LPGLAGTAGEPGRDGNPGSD----GLPGRDGSPGGKGDRGENGS 1039



 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 50/144 (34%), Positives = 57/144 (39%), Gaps = 25/144 (17%)

Query: 14   ADPANEPPP------PGPMPPAPRRG-----GGVGVGG-----GGTGVGGGDRDR-DSGV 56
            A PA  P P      PGP  P   +G     G  G+ G     G  G  G        G 
Sbjct: 1070 AGPAGAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGA 1129

Query: 57   VG----ARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG- 111
            +G    A PR    P GP PG  G         PPG   G R ++ S    G PG PG  
Sbjct: 1130 IGSPGPAGPRGPVGPSGP-PGKDGTSGHPGPIGPPGP-RGNRGERGSEGSPGHPGQPGPP 1187

Query: 112  GPGDALGAAAAGVGAAGVVVGVGG 135
            GP  A G    GVGAA +  G+GG
Sbjct: 1188 GPPGAPGPCCGGVGAAAI-AGIGG 1210



 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 51/152 (33%), Positives = 57/152 (37%), Gaps = 13/152 (8%)

Query: 6   KKKPPPPDAD--PANEPP--PPGPM-PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
           K +P  P AD  P  + P  P GP+ PP P    G    GG  G+ G    R  G  G R
Sbjct: 743 KGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPR--GSPGER 800

Query: 61  PRASPPPQGPLPGPPGALH----RWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPG-D 115
               PP     PG PG       +     P     G  P  A PP   GP GP G  G  
Sbjct: 801 GETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVK 860

Query: 116 ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147
               +  G GAAG   G  G  G  G    PG
Sbjct: 861 GERGSPGGPGAAG-FPGARGLPGPPGSNGNPG 891



 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 52/173 (30%), Positives = 61/173 (35%), Gaps = 14/173 (8%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDR-DSGVVGARP 61
           P   P  P    A  PP P     AP   GG G  G  G  G  G   +R ++G+ G   
Sbjct: 400 PAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPG 459

Query: 62  RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAA 121
                 +   PG PGA         PGA AG R      P   GP GP G PG+   A  
Sbjct: 460 AKGEDGKDGSPGEPGANGL------PGA-AGER----GAPGFRGPAGPNGIPGEKGPAGE 508

Query: 122 AGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174
            G        G  G  G  G   GPG         G G+ G   P   +  +G
Sbjct: 509 RGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESG 561



 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 48/157 (30%), Positives = 54/157 (34%), Gaps = 16/157 (10%)

Query: 20  PPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRD----SGVVGARPRASPPPQGPLPG 73
           P  PGP  P P + G  G  G  G TG GG   D       G+ G      PP +   PG
Sbjct: 599 PGGPGPQGP-PGKNGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPG 657

Query: 74  PPGALHRWALAVPPGAVA--------GPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVG 125
            PG          PG           GP P  A  P   G  GP G  G    A   G  
Sbjct: 658 EPGPKGDAGAPGAPGGKGDAGAPGERGP-PGLAGAPGLRGGAGPPGPEGGKGAAGPPGPP 716

Query: 126 AAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG 162
            A    G+ G  G  G    PG    + +  G GA G
Sbjct: 717 GAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADG 753



 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 50/169 (29%), Positives = 54/169 (31%), Gaps = 15/169 (8%)

Query: 4   LPKKKPPPPDADPANEPPPPGP--MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARP 61
           LP    P        E  PPGP   P AP + G  G  G     G        GV G  P
Sbjct: 787 LPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAG--P 844

Query: 62  RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCG----GPGGPGGGPGDAL 117
                P GP PGP G          PGA   P  +    PP      GP GP G PG   
Sbjct: 845 PGGSGPAGP-PGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDG 903

Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
               AG        G  G+ GV G     G    +      G  G   P
Sbjct: 904 PPGPAGN------TGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGP 946



 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 51/171 (29%), Positives = 61/171 (35%), Gaps = 15/171 (8%)

Query: 17   ANEPPPPGPM--------PPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGARPRAS-- 64
            + E  PPGP            P R G  G  G  G  G  GG  DR        P A   
Sbjct: 989  SGERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGH 1048

Query: 65   PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGV 124
            P P GP+ GP G       + P G    P P  +   P  GP GP G  G+     AAG+
Sbjct: 1049 PGPPGPV-GPAGKSGDRGESGPAGPAGAPGPAGSRGAP--GPQGPRGDKGETGERGAAGI 1105

Query: 125  GAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGY 175
                   G  GA G  G     G       A   G VG   P  ++  +G+
Sbjct: 1106 KGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGH 1156



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 49/187 (26%), Positives = 57/187 (30%), Gaps = 33/187 (17%)

Query: 9   PPPPDADPANEPPPPGPMPPA----PRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
           PP P   P     P  P  P     P   G  G  G     G       +G  G   R  
Sbjct: 178 PPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPG 237

Query: 65  PPPQGPLPGPPGALHRWALAVPPG-----------------AVAGPRPQQASPPPCGGPG 107
            P +  LPGPPG      +   PG                    G + +   P   G PG
Sbjct: 238 RPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPG 297

Query: 108 --GPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGS 165
             GP G PG+       G+  A    G  GA G  G    PG        PG     G  
Sbjct: 298 PMGPRGAPGE---RGRPGLPGAAGARGNDGARGSDGQPGPPG-------PPGTAGFPGSP 347

Query: 166 PEREEVG 172
             + EVG
Sbjct: 348 GAKGEVG 354



 Score = 37.4 bits (85), Expect = 0.037
 Identities = 44/162 (27%), Positives = 52/162 (32%), Gaps = 9/162 (5%)

Query: 10  PPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQG 69
           P  +   A  P  PG      + G     G  G     G+R        A P   P  +G
Sbjct: 445 PRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKG 504

Query: 70  PLP--GPPGALHRWALAVPPG--AVAGPRPQQASPPPCGGPG-----GPGGGPGDALGAA 120
           P    G PG       A  PG   V G    +  P   GGPG     GP G  G++    
Sbjct: 505 PAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPG 564

Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG 162
             G        GV G  G  G    PG +  R    G G  G
Sbjct: 565 PPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQG 606



 Score = 36.2 bits (82), Expect = 0.083
 Identities = 50/172 (29%), Positives = 57/172 (33%), Gaps = 25/172 (14%)

Query: 8   KPPPPDADPANEPPPPGPM-----PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPR 62
           +PP     P N   P GP      P  P R G  G+ G     G        G  G    
Sbjct: 90  QPPTAPTRPPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPGSPGS------PGPPGICES 143

Query: 63  ASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA 122
               PQ   P       +  +AV  G +AG  P  A PP   GP G  G PG        
Sbjct: 144 CPTGPQNYSPQYDSYDVKSGVAV--GGLAG-YPGPAGPPGPPGPPGTSGHPGSPGSPGYQ 200

Query: 123 G----VGAAGV--VVGVGGAVGVGGCCSGPGHSKR-----RRQAPGVGAVGG 163
           G     G AG     G  GA+G  G     G S R      R  PG   + G
Sbjct: 201 GPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKG 252



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 46/171 (26%), Positives = 58/171 (33%), Gaps = 30/171 (17%)

Query: 9   PPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQ 68
           P PP A      PP G  P  P+   G        G+ G  R+ D G+ G       P  
Sbjct: 89  PQPPTAPTR---PPNGQGPQGPKGDPGP------PGIPG--RNGDPGIPGQ------PGS 131

Query: 69  GPLPGPPGALHRWALAVPPGAVAGPR---PQQASPPPCGGP--GGPGGGPGDALGAAAAG 123
              PGPPG        +      GP+   PQ  S     G   GG  G PG A      G
Sbjct: 132 PGSPGPPG--------ICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPG 183

Query: 124 VGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174
                   G  G+ G  G    PG +         GA+G   P  ++  +G
Sbjct: 184 PPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESG 234


>gi|73476377 LBXCOR1 homolog [Homo sapiens]
          Length = 921

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 55/171 (32%), Positives = 64/171 (37%), Gaps = 22/171 (12%)

Query: 9   PPPPDADPANEPP---PPGPMPPAPRRGGGVGVGGGGT----GVGGGDRDRDSGVVGARP 61
           PPP  +    E     PPGP PP P+RG G+  G  G     G GGG   R   V+    
Sbjct: 276 PPPHKSLRCGEDEAAGPPGPPPPHPQRGLGLATGASGPAGPGGPGGGAGVRSYPVIPVPS 335

Query: 62  RAS------PPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPG 114
           +        PPP  P P G P A         P   AG         P GGPG   GG G
Sbjct: 336 KGFGLLQKLPPPLFPHPYGFPTAFGLCPKKDDPVLGAGE--------PKGGPGTGSGGGG 387

Query: 115 DALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGS 165
              G  A G GA+ +  G G   G G    G   S   + A  V A    +
Sbjct: 388 AGTGGGAGGPGASHLPPGAGAGPGGGAMFWGHQPSGAAKDAAAVAAAAAAA 438



 Score = 39.7 bits (91), Expect = 0.008
 Identities = 45/169 (26%), Positives = 52/169 (30%), Gaps = 4/169 (2%)

Query: 4   LPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRA 63
           L +K PPP    P   P   G  P       G G   GG G G G     +G     P A
Sbjct: 340 LLQKLPPPLFPHPYGFPTAFGLCPKKDDPVLGAGEPKGGPGTGSGGGGAGTGGGAGGPGA 399

Query: 64  SPPPQGPLPGPPGALHRW----ALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGA 119
           S  P G   GP G    W    + A    A        A+  P      P  G       
Sbjct: 400 SHLPPGAGAGPGGGAMFWGHQPSGAAKDAAAVAAAAAAATVYPTFPMFWPAAGSLPVPSY 459

Query: 120 AAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPER 168
            AA   A  V   V  A       +G G  +    A      G G+ ER
Sbjct: 460 PAAQSQAKAVAAAVAAAAAAAAAAAGSGAPEPLDGAEPAKESGLGAEER 508



 Score = 32.7 bits (73), Expect = 0.92
 Identities = 30/112 (26%), Positives = 35/112 (31%), Gaps = 26/112 (23%)

Query: 12  PDADPANEPPPPGPMPPAPRRGGGVG-------VGGGGTGVGGGDRDRDSGVVGARPRAS 64
           PD + A E   P     AP  GGG              +G  G     D G    R R  
Sbjct: 625 PDDEDAQEETEPS----APSAGGGPDGEQPTGPPSATSSGADGPANSPDGGSPRPRRRLG 680

Query: 65  PPPQG---------------PLPGPPGALHRWALAVPPGAVAGPRPQQASPP 101
           PPP G               P   PP     + L  P G + GP P +   P
Sbjct: 681 PPPAGRPAFGDLAAEDLVRRPERSPPSGGGGYELREPCGPLGGPAPAKVFAP 732


>gi|126352608 elastin isoform e precursor [Homo sapiens]
          Length = 705

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 63/191 (32%), Positives = 74/191 (38%), Gaps = 41/191 (21%)

Query: 16  PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP- 74
           P    P  G +P  P    G GV     GVGG      +G+ G  P   P P  PL  P 
Sbjct: 156 PGARFPGVGVLPGVPT---GAGVKPKAPGVGGAF----AGIPGVGPFGGPQPGVPLGYPI 208

Query: 75  -----------PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA- 122
                      P    +      PG VAG   +       G P G G GP  A  AAA  
Sbjct: 209 KAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK------AGYPTGTGVGPQAAAAAAAKA 262

Query: 123 ----GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG-GSPEREEVGAGYNS 177
               G GAAGV+ GVGGA GV G    PG        PG+G + G G+P      A    
Sbjct: 263 AAKFGAGAAGVLPGVGGA-GVPGV---PG------AIPGIGGIAGVGTPAAAAAAAAAAK 312

Query: 178 EDEYEAAAARI 188
             +Y AAA  +
Sbjct: 313 AAKYGAAAGLV 323



 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 54/149 (36%), Positives = 63/149 (42%), Gaps = 25/149 (16%)

Query: 33  GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALH--RWALAVPPGAV 90
           G GVGVG  G GVG       +GV G    A  P  G +PG   A    ++  AVP G +
Sbjct: 533 GLGVGVGVPGLGVG-------AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP-GVL 584

Query: 91  AGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148
            G           GG G PGG  G G A  AAAA   A     G+ GA G+GG   G   
Sbjct: 585 GGLGA-------LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG-- 635

Query: 149 SKRRRQAPGVGAVGGGSPEREEVGAGYNS 177
                  PGVG +GG  P      A Y +
Sbjct: 636 ----LGVPGVGGLGGIPPAAAAKAAKYGA 660



 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 54/161 (33%), Positives = 60/161 (37%), Gaps = 33/161 (20%)

Query: 21  PPPGPMPPAPRRGGGVGVGGG----------GTGVGGGDRDRDSGVVGARPRASPPPQGP 70
           P   P+ P P    G G+G G          G  V GG  D  +    A+  A     G 
Sbjct: 58  PGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAG---LGG 114

Query: 71  LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDAL-GAAAAGVGAA-G 128
           +PG  G      L V  GAV         P    G G PG  PG  L GA   GVG   G
Sbjct: 115 VPGVGG------LGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPG 168

Query: 129 VVVGVG---GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
           V  G G    A GVGG  +G          PGVG  GG  P
Sbjct: 169 VPTGAGVKPKAPGVGGAFAG---------IPGVGPFGGPQP 200



 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 50/151 (33%), Positives = 58/151 (38%), Gaps = 23/151 (15%)

Query: 29  APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPG 88
           A + G   G+  GG G G G      GV GA       P   +P  PGA       +P  
Sbjct: 313 AAKYGAAAGLVPGGPGFGPGV----VGVPGAGVPGVGVPGAGIPVVPGA------GIPGA 362

Query: 89  AVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA-GVGAAGVV---VGVGGAVGVGGCCS 144
           AV G    +A+          G  PG  +G     GVGA G     VGVGG  GV G   
Sbjct: 363 AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPG 422

Query: 145 GPGHSKRRRQAPGVGAVGGG--SPEREEVGA 173
             G        PGVG V G   SPE +   A
Sbjct: 423 VGG-------VPGVGGVPGVGISPEAQAAAA 446



 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 53/148 (35%), Positives = 57/148 (38%), Gaps = 27/148 (18%)

Query: 20  PPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGA 77
           P  PG +P A   G  GGV   G G G  GG      G +G       P   PL   PG 
Sbjct: 23  PSRPGGVPGAIPGGVPGGVFYPGAGLGALGG------GALG-------PGGKPLKPVPGG 69

Query: 78  LHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGG 135
           L    L    GA  G  P    P    G   PGG      A  AA AG G  G V GVGG
Sbjct: 70  LAGAGL----GAGLGAFPAVTFP----GALVPGGVADAAAAYKAAKAGAGLGG-VPGVGG 120

Query: 136 -AVGVGGCCSGPGHSKRRRQAPGVGAVG 162
             V  G     PG   +  + PGVG  G
Sbjct: 121 LGVSAGAVVPQPGAGVKPGKVPGVGLPG 148



 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 57/160 (35%), Positives = 63/160 (39%), Gaps = 29/160 (18%)

Query: 35  GVGVGGG---GTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVA 91
           GVG GG    G GVGG       GV G       P  G +PG   +    A A    A  
Sbjct: 398 GVGAGGFPGFGVGVGG-----IPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 452

Query: 92  GPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA---GVVVGVGGAVGVG-GCCSGPG 147
           G  P     P  G   G G  PG  L   A GVG A   GV  GVG A G+G G  +   
Sbjct: 453 GLVPGVGVAPGVGVAPGVGVAPGVGL---APGVGVAPGVGVAPGVGVAPGIGPGGVAAAA 509

Query: 148 HSKRR-------RQAPGVGA------VGGGSPEREEVGAG 174
            S  +       R A G+GA      VG G P    VGAG
Sbjct: 510 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-GVGAG 548



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 53/173 (30%), Positives = 62/173 (35%), Gaps = 39/173 (22%)

Query: 34  GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVP--PGAVA 91
           G  G  G  TG G G +   +    A  +      G LPG  GA       VP  PGA+ 
Sbjct: 237 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA------GVPGVPGAIP 290

Query: 92  G-------PRPQQASPPPCGG------------PGGPGGGPG----DALGAAAAGVGAAG 128
           G         P  A+                  PGGPG GPG       G    GV  AG
Sbjct: 291 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAG 350

Query: 129 VVV----GVGGAVGVGGCCSGPGHSKRRRQAPGVGA---VGGGSPEREEVGAG 174
           + V    G+ GA  V G  S    +K   +A   GA   VG G      VGAG
Sbjct: 351 IPVVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 402



 Score = 37.7 bits (86), Expect = 0.029
 Identities = 58/211 (27%), Positives = 69/211 (32%), Gaps = 56/211 (26%)

Query: 33  GGGVGVGG-----------GGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG---PPGAL 78
           G GVGVGG           G  GVGG      S    A   A     G +PG    PG  
Sbjct: 406 GFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVG 465

Query: 79  HRWALAVPPGAVAGP----RPQQASPPPCG-----GPGGPG------------------- 110
               + V PG    P     P     P  G     GPGG                     
Sbjct: 466 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 525

Query: 111 ----GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAP---------- 156
               G PG  +G    G+G    V G+G   GV G  + PG     + A           
Sbjct: 526 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG 585

Query: 157 GVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187
           G+GA+GG       VGAG  +      AAA+
Sbjct: 586 GLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 616


>gi|126352446 elastin isoform d precursor [Homo sapiens]
          Length = 711

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 63/191 (32%), Positives = 74/191 (38%), Gaps = 41/191 (21%)

Query: 16  PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP- 74
           P    P  G +P  P    G GV     GVGG      +G+ G  P   P P  PL  P 
Sbjct: 161 PGARFPGVGVLPGVPT---GAGVKPKAPGVGGAF----AGIPGVGPFGGPQPGVPLGYPI 213

Query: 75  -----------PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA- 122
                      P    +      PG VAG   +       G P G G GP  A  AAA  
Sbjct: 214 KAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK------AGYPTGTGVGPQAAAAAAAKA 267

Query: 123 ----GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG-GSPEREEVGAGYNS 177
               G GAAGV+ GVGGA GV G    PG        PG+G + G G+P      A    
Sbjct: 268 AAKFGAGAAGVLPGVGGA-GVPGV---PG------AIPGIGGIAGVGTPAAAAAAAAAAK 317

Query: 178 EDEYEAAAARI 188
             +Y AAA  +
Sbjct: 318 AAKYGAAAGLV 328



 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 52/147 (35%), Positives = 61/147 (41%), Gaps = 18/147 (12%)

Query: 33  GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALH--RWALAVPPGAV 90
           G G G+ G G GVG       +GV G    A  P  G +PG   A    ++  AV PG +
Sbjct: 550 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAV-PGVL 608

Query: 91  AGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148
            G           GG G PGG  G G A  AAAA   A     G+ GA G+GG   G   
Sbjct: 609 GG-------LGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVG--- 658

Query: 149 SKRRRQAPGVGAVGGGSPEREEVGAGY 175
                  PGVG +GG  P      A Y
Sbjct: 659 ---GLGVPGVGGLGGIPPAAAAKAAKY 682



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 55/163 (33%), Positives = 60/163 (36%), Gaps = 32/163 (19%)

Query: 21  PPPGPMPPAPRRGGGVGVGGG----------GTGVGGGDRDRDSGVVGARPRASPPPQGP 70
           P   P+ P P    G G+G G          G  V GG  D  +    A+  A       
Sbjct: 58  PGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAG------ 111

Query: 71  LPGPPGALHRWALAVP--PGAVAGPRPQQASPPPCGGPGGPGGGPGDAL-GAAAAGVGAA 127
           L G PG       A P  PGAV         P    G G PG  PG  L GA   GVG  
Sbjct: 112 LGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVL 171

Query: 128 -GVVVGVG---GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
            GV  G G    A GVGG  +G          PGVG  GG  P
Sbjct: 172 PGVPTGAGVKPKAPGVGGAFAG---------IPGVGPFGGPQP 205



 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 46/142 (32%), Positives = 55/142 (38%), Gaps = 18/142 (12%)

Query: 34  GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGP 93
           GG G G G  GV G      +GV G     +  P  P  G PGA     ++    A A  
Sbjct: 330 GGPGFGPGVVGVPG------AGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAA 383

Query: 94  RPQQASPPPCGGPGG-------PGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGP 146
           +  +    P  G GG        GG PG   G    G+     V GVGG  GVGG   G 
Sbjct: 384 KAAKYGARPGVGVGGIPTYGVGAGGFPG--FGVGVGGIPGVAGVPGVGGVPGVGG-VPGV 440

Query: 147 GHSKRRRQAPGVGAV--GGGSP 166
           G S   + A    A   G G+P
Sbjct: 441 GISPEAQAAAAAKAAKYGVGTP 462



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 53/173 (30%), Positives = 62/173 (35%), Gaps = 39/173 (22%)

Query: 34  GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVP--PGAVA 91
           G  G  G  TG G G +   +    A  +      G LPG  GA       VP  PGA+ 
Sbjct: 242 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA------GVPGVPGAIP 295

Query: 92  G-------PRPQQASPPPCGG------------PGGPGGGPG----DALGAAAAGVGAAG 128
           G         P  A+                  PGGPG GPG       G    GV  AG
Sbjct: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAG 355

Query: 129 VVV----GVGGAVGVGGCCSGPGHSKRRRQAPGVGA---VGGGSPEREEVGAG 174
           + V    G+ GA  V G  S    +K   +A   GA   VG G      VGAG
Sbjct: 356 IPVVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 407



 Score = 37.4 bits (85), Expect = 0.037
 Identities = 59/168 (35%), Positives = 63/168 (37%), Gaps = 32/168 (19%)

Query: 33  GGGVGVGG-----GGTGVGGGDRDRDSGVVGARPRASPPPQGPLP----GPPGALHRWAL 83
           G GVGVGG     G  GVGG         VG  P A             G P A    A 
Sbjct: 411 GFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAA--AK 468

Query: 84  AVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA---GVVVGVGGAVGVG 140
           A    A  G  P     P  G   G G  PG  L   A GVG A   GV  GVG A G+G
Sbjct: 469 AAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGL---APGVGVAPGVGVAPGVGVAPGIG 525

Query: 141 -GCCSGPGHSKRR-------RQAPGVGA------VGGGSPEREEVGAG 174
            G  +    S  +       R A G+GA      VG G P    VGAG
Sbjct: 526 PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-GVGAG 572



 Score = 37.4 bits (85), Expect = 0.037
 Identities = 52/171 (30%), Positives = 63/171 (36%), Gaps = 29/171 (16%)

Query: 35  GVGVGGGGTGVGGGDRDRDSGVVGARPRAS-PPPQGPLPG---PPGALHRWALAVPPGAV 90
           GVGV  G  GV  G        VG  P     P  G  PG    PG     A  + PG V
Sbjct: 481 GVGVAPG-VGVAPG--------VGVAPGVGLAPGVGVAPGVGVAPGV--GVAPGIGPGGV 529

Query: 91  AGPRPQQA---SPPPCGGPGGPGGG-PGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGP 146
           A      A   +        G G G PG  +G    G+G    V G+G   GV G  + P
Sbjct: 530 AAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVP 589

Query: 147 GHSKRRRQAP----------GVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187
           G     + A           G+GA+GG       VGAG  +      AAA+
Sbjct: 590 GALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 640



 Score = 33.5 bits (75), Expect = 0.54
 Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 11/88 (12%)

Query: 87  PGAVAGPRPQQASPPPCG------GPGGPGGGPGDAL--GAAAAGVGA---AGVVVGVGG 135
           PGA+ G  P     P  G      G  GPGG P   +  G A AG+GA   A   V   G
Sbjct: 30  PGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPG 89

Query: 136 AVGVGGCCSGPGHSKRRRQAPGVGAVGG 163
           A+  GG        K  +   G+G V G
Sbjct: 90  ALVPGGVADAAAAYKAAKAGAGLGGVPG 117



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 11/61 (18%)

Query: 106 PGGPGGGPGDALGAAAAGVGAAGVVVGV--GGAVGVGGCCSGPGHSKRRRQAPGVGAVGG 163
           P  PGG PG   G    GV   G  +G   GGA+G GG        K  +  PG G  G 
Sbjct: 23  PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG--------KPLKPVPG-GLAGA 73

Query: 164 G 164
           G
Sbjct: 74  G 74


>gi|126352322 elastin isoform c precursor [Homo sapiens]
          Length = 692

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 63/191 (32%), Positives = 74/191 (38%), Gaps = 41/191 (21%)

Query: 16  PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP- 74
           P    P  G +P  P    G GV     GVGG      +G+ G  P   P P  PL  P 
Sbjct: 161 PGARFPGVGVLPGVPT---GAGVKPKAPGVGGAF----AGIPGVGPFGGPQPGVPLGYPI 213

Query: 75  -----------PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA- 122
                      P    +      PG VAG   +       G P G G GP  A  AAA  
Sbjct: 214 KAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK------AGYPTGTGVGPQAAAAAAAKA 267

Query: 123 ----GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG-GSPEREEVGAGYNS 177
               G GAAGV+ GVGGA GV G    PG        PG+G + G G+P      A    
Sbjct: 268 AAKFGAGAAGVLPGVGGA-GVPGV---PG------AIPGIGGIAGVGTPAAAAAAAAAAK 317

Query: 178 EDEYEAAAARI 188
             +Y AAA  +
Sbjct: 318 AAKYGAAAGLV 328



 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 54/147 (36%), Positives = 62/147 (42%), Gaps = 25/147 (17%)

Query: 33  GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALH--RWALAVPPGAV 90
           G GVGVG  G GVG       +GV G    A  P  G +PG   A    ++  AVP G +
Sbjct: 538 GLGVGVGVPGLGVG-------AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP-GVL 589

Query: 91  AGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148
            G           GG G PGG  G G A  AAAA   A     G+ GA G+GG   G   
Sbjct: 590 GGLGA-------LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG-- 640

Query: 149 SKRRRQAPGVGAVGGGSPEREEVGAGY 175
                  PGVG +GG  P      A Y
Sbjct: 641 ----LGVPGVGGLGGIPPAAAAKAAKY 663



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 55/163 (33%), Positives = 60/163 (36%), Gaps = 32/163 (19%)

Query: 21  PPPGPMPPAPRRGGGVGVGGG----------GTGVGGGDRDRDSGVVGARPRASPPPQGP 70
           P   P+ P P    G G+G G          G  V GG  D  +    A+  A       
Sbjct: 58  PGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAG------ 111

Query: 71  LPGPPGALHRWALAVP--PGAVAGPRPQQASPPPCGGPGGPGGGPGDAL-GAAAAGVGAA 127
           L G PG       A P  PGAV         P    G G PG  PG  L GA   GVG  
Sbjct: 112 LGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVL 171

Query: 128 -GVVVGVG---GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
            GV  G G    A GVGG  +G          PGVG  GG  P
Sbjct: 172 PGVPTGAGVKPKAPGVGGAFAG---------IPGVGPFGGPQP 205



 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 50/151 (33%), Positives = 58/151 (38%), Gaps = 23/151 (15%)

Query: 29  APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPG 88
           A + G   G+  GG G G G      GV GA       P   +P  PGA       +P  
Sbjct: 318 AAKYGAAAGLVPGGPGFGPGV----VGVPGAGVPGVGVPGAGIPVVPGA------GIPGA 367

Query: 89  AVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA-GVGAAGVV---VGVGGAVGVGGCCS 144
           AV G    +A+          G  PG  +G     GVGA G     VGVGG  GV G   
Sbjct: 368 AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPG 427

Query: 145 GPGHSKRRRQAPGVGAVGGG--SPEREEVGA 173
             G        PGVG V G   SPE +   A
Sbjct: 428 VGG-------VPGVGGVPGVGISPEAQAAAA 451



 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 57/160 (35%), Positives = 63/160 (39%), Gaps = 29/160 (18%)

Query: 35  GVGVGGG---GTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVA 91
           GVG GG    G GVGG       GV G       P  G +PG   +    A A    A  
Sbjct: 403 GVGAGGFPGFGVGVGG-----IPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 457

Query: 92  GPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA---GVVVGVGGAVGVG-GCCSGPG 147
           G  P     P  G   G G  PG  L   A GVG A   GV  GVG A G+G G  +   
Sbjct: 458 GLVPGVGVAPGVGVAPGVGVAPGVGL---APGVGVAPGVGVAPGVGVAPGIGPGGVAAAA 514

Query: 148 HSKRR-------RQAPGVGA------VGGGSPEREEVGAG 174
            S  +       R A G+GA      VG G P    VGAG
Sbjct: 515 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-GVGAG 553



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 53/173 (30%), Positives = 62/173 (35%), Gaps = 39/173 (22%)

Query: 34  GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVP--PGAVA 91
           G  G  G  TG G G +   +    A  +      G LPG  GA       VP  PGA+ 
Sbjct: 242 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA------GVPGVPGAIP 295

Query: 92  G-------PRPQQASPPPCGG------------PGGPGGGPG----DALGAAAAGVGAAG 128
           G         P  A+                  PGGPG GPG       G    GV  AG
Sbjct: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAG 355

Query: 129 VVV----GVGGAVGVGGCCSGPGHSKRRRQAPGVGA---VGGGSPEREEVGAG 174
           + V    G+ GA  V G  S    +K   +A   GA   VG G      VGAG
Sbjct: 356 IPVVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 407



 Score = 37.7 bits (86), Expect = 0.029
 Identities = 58/211 (27%), Positives = 69/211 (32%), Gaps = 56/211 (26%)

Query: 33  GGGVGVGG-----------GGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG---PPGAL 78
           G GVGVGG           G  GVGG      S    A   A     G +PG    PG  
Sbjct: 411 GFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVG 470

Query: 79  HRWALAVPPGAVAGP----RPQQASPPPCG-----GPGGPG------------------- 110
               + V PG    P     P     P  G     GPGG                     
Sbjct: 471 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 530

Query: 111 ----GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAP---------- 156
               G PG  +G    G+G    V G+G   GV G  + PG     + A           
Sbjct: 531 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG 590

Query: 157 GVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187
           G+GA+GG       VGAG  +      AAA+
Sbjct: 591 GLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 621



 Score = 33.5 bits (75), Expect = 0.54
 Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 11/88 (12%)

Query: 87  PGAVAGPRPQQASPPPCG------GPGGPGGGPGDAL--GAAAAGVGA---AGVVVGVGG 135
           PGA+ G  P     P  G      G  GPGG P   +  G A AG+GA   A   V   G
Sbjct: 30  PGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPG 89

Query: 136 AVGVGGCCSGPGHSKRRRQAPGVGAVGG 163
           A+  GG        K  +   G+G V G
Sbjct: 90  ALVPGGVADAAAAYKAAKAGAGLGGVPG 117



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 11/61 (18%)

Query: 106 PGGPGGGPGDALGAAAAGVGAAGVVVGV--GGAVGVGGCCSGPGHSKRRRQAPGVGAVGG 163
           P  PGG PG   G    GV   G  +G   GGA+G GG        K  +  PG G  G 
Sbjct: 23  PSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGG--------KPLKPVPG-GLAGA 73

Query: 164 G 164
           G
Sbjct: 74  G 74


>gi|126352700 elastin isoform b precursor [Homo sapiens]
          Length = 677

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 63/191 (32%), Positives = 74/191 (38%), Gaps = 41/191 (21%)

Query: 16  PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP- 74
           P    P  G +P  P    G GV     GVGG      +G+ G  P   P P  PL  P 
Sbjct: 146 PGARFPGVGVLPGVPT---GAGVKPKAPGVGGAF----AGIPGVGPFGGPQPGVPLGYPI 198

Query: 75  -----------PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA- 122
                      P    +      PG VAG   +       G P G G GP  A  AAA  
Sbjct: 199 KAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK------AGYPTGTGVGPQAAAAAAAKA 252

Query: 123 ----GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG-GSPEREEVGAGYNS 177
               G GAAGV+ GVGGA GV G    PG        PG+G + G G+P      A    
Sbjct: 253 AAKFGAGAAGVLPGVGGA-GVPGV---PG------AIPGIGGIAGVGTPAAAAAAAAAAK 302

Query: 178 EDEYEAAAARI 188
             +Y AAA  +
Sbjct: 303 AAKYGAAAGLV 313



 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 54/147 (36%), Positives = 62/147 (42%), Gaps = 25/147 (17%)

Query: 33  GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALH--RWALAVPPGAV 90
           G GVGVG  G GVG       +GV G    A  P  G +PG   A    ++  AVP G +
Sbjct: 523 GLGVGVGVPGLGVG-------AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP-GVL 574

Query: 91  AGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148
            G           GG G PGG  G G A  AAAA   A     G+ GA G+GG   G   
Sbjct: 575 GGLGA-------LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG-- 625

Query: 149 SKRRRQAPGVGAVGGGSPEREEVGAGY 175
                  PGVG +GG  P      A Y
Sbjct: 626 ----LGVPGVGGLGGIPPAAAAKAAKY 648



 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 59/186 (31%), Positives = 66/186 (35%), Gaps = 42/186 (22%)

Query: 5   PKKKPPPPDADPANEP---------PPPGPMPPAPRRGGGVGVGGG----------GTGV 45
           P +    P A P   P         P   P+ P P    G G+G G          G  V
Sbjct: 23  PSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALV 82

Query: 46  GGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGG 105
            GG  D  +    A+  A     G +PG  G      L V  GAV         P    G
Sbjct: 83  PGGVADAAAAYKAAKAGAG---LGGVPGVGG------LGVSAGAVVPQPGAGVKPGKVPG 133

Query: 106 PGGPGGGPGDAL-GAAAAGVGAA-GVVVGVG---GAVGVGGCCSGPGHSKRRRQAPGVGA 160
            G PG  PG  L GA   GVG   GV  G G    A GVGG  +G          PGVG 
Sbjct: 134 VGLPGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAG---------IPGVGP 184

Query: 161 VGGGSP 166
            GG  P
Sbjct: 185 FGGPQP 190



 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 50/151 (33%), Positives = 58/151 (38%), Gaps = 23/151 (15%)

Query: 29  APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPG 88
           A + G   G+  GG G G G      GV GA       P   +P  PGA       +P  
Sbjct: 303 AAKYGAAAGLVPGGPGFGPGV----VGVPGAGVPGVGVPGAGIPVVPGA------GIPGA 352

Query: 89  AVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA-GVGAAGVV---VGVGGAVGVGGCCS 144
           AV G    +A+          G  PG  +G     GVGA G     VGVGG  GV G   
Sbjct: 353 AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPG 412

Query: 145 GPGHSKRRRQAPGVGAVGGG--SPEREEVGA 173
             G        PGVG V G   SPE +   A
Sbjct: 413 VGG-------VPGVGGVPGVGISPEAQAAAA 436



 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 57/160 (35%), Positives = 63/160 (39%), Gaps = 29/160 (18%)

Query: 35  GVGVGGG---GTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVA 91
           GVG GG    G GVGG       GV G       P  G +PG   +    A A    A  
Sbjct: 388 GVGAGGFPGFGVGVGG-----IPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 442

Query: 92  GPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA---GVVVGVGGAVGVG-GCCSGPG 147
           G  P     P  G   G G  PG  L   A GVG A   GV  GVG A G+G G  +   
Sbjct: 443 GLVPGVGVAPGVGVAPGVGVAPGVGL---APGVGVAPGVGVAPGVGVAPGIGPGGVAAAA 499

Query: 148 HSKRR-------RQAPGVGA------VGGGSPEREEVGAG 174
            S  +       R A G+GA      VG G P    VGAG
Sbjct: 500 KSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-GVGAG 538



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 53/173 (30%), Positives = 62/173 (35%), Gaps = 39/173 (22%)

Query: 34  GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVP--PGAVA 91
           G  G  G  TG G G +   +    A  +      G LPG  GA       VP  PGA+ 
Sbjct: 227 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA------GVPGVPGAIP 280

Query: 92  G-------PRPQQASPPPCGG------------PGGPGGGPG----DALGAAAAGVGAAG 128
           G         P  A+                  PGGPG GPG       G    GV  AG
Sbjct: 281 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAG 340

Query: 129 VVV----GVGGAVGVGGCCSGPGHSKRRRQAPGVGA---VGGGSPEREEVGAG 174
           + V    G+ GA  V G  S    +K   +A   GA   VG G      VGAG
Sbjct: 341 IPVVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 392



 Score = 37.7 bits (86), Expect = 0.029
 Identities = 58/211 (27%), Positives = 69/211 (32%), Gaps = 56/211 (26%)

Query: 33  GGGVGVGG-----------GGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG---PPGAL 78
           G GVGVGG           G  GVGG      S    A   A     G +PG    PG  
Sbjct: 396 GFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVG 455

Query: 79  HRWALAVPPGAVAGP----RPQQASPPPCG-----GPGGPG------------------- 110
               + V PG    P     P     P  G     GPGG                     
Sbjct: 456 VAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAA 515

Query: 111 ----GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAP---------- 156
               G PG  +G    G+G    V G+G   GV G  + PG     + A           
Sbjct: 516 GLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLG 575

Query: 157 GVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187
           G+GA+GG       VGAG  +      AAA+
Sbjct: 576 GLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 606


>gi|126352440 elastin isoform a precursor [Homo sapiens]
          Length = 724

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 63/191 (32%), Positives = 74/191 (38%), Gaps = 41/191 (21%)

Query: 16  PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP- 74
           P    P  G +P  P    G GV     GVGG      +G+ G  P   P P  PL  P 
Sbjct: 156 PGARFPGVGVLPGVPT---GAGVKPKAPGVGGAF----AGIPGVGPFGGPQPGVPLGYPI 208

Query: 75  -----------PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAA- 122
                      P    +      PG VAG   +       G P G G GP  A  AAA  
Sbjct: 209 KAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGK------AGYPTGTGVGPQAAAAAAAKA 262

Query: 123 ----GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG-GSPEREEVGAGYNS 177
               G GAAGV+ GVGGA GV G    PG        PG+G + G G+P      A    
Sbjct: 263 AAKFGAGAAGVLPGVGGA-GVPGV---PG------AIPGIGGIAGVGTPAAAAAAAAAAK 312

Query: 178 EDEYEAAAARI 188
             +Y AAA  +
Sbjct: 313 AAKYGAAAGLV 323



 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 54/149 (36%), Positives = 63/149 (42%), Gaps = 25/149 (16%)

Query: 33  GGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALH--RWALAVPPGAV 90
           G GVGVG  G GVG       +GV G    A  P  G +PG   A    ++  AVP G +
Sbjct: 552 GLGVGVGVPGLGVG-------AGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP-GVL 603

Query: 91  AGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148
            G           GG G PGG  G G A  AAAA   A     G+ GA G+GG   G   
Sbjct: 604 GGLGA-------LGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGG-- 654

Query: 149 SKRRRQAPGVGAVGGGSPEREEVGAGYNS 177
                  PGVG +GG  P      A Y +
Sbjct: 655 ----LGVPGVGGLGGIPPAAAAKAAKYGA 679



 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 54/161 (33%), Positives = 60/161 (37%), Gaps = 33/161 (20%)

Query: 21  PPPGPMPPAPRRGGGVGVGGG----------GTGVGGGDRDRDSGVVGARPRASPPPQGP 70
           P   P+ P P    G G+G G          G  V GG  D  +    A+  A     G 
Sbjct: 58  PGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAG---LGG 114

Query: 71  LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDAL-GAAAAGVGAA-G 128
           +PG  G      L V  GAV         P    G G PG  PG  L GA   GVG   G
Sbjct: 115 VPGVGG------LGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPG 168

Query: 129 VVVGVG---GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
           V  G G    A GVGG  +G          PGVG  GG  P
Sbjct: 169 VPTGAGVKPKAPGVGGAFAG---------IPGVGPFGGPQP 200



 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 46/142 (32%), Positives = 55/142 (38%), Gaps = 18/142 (12%)

Query: 34  GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGP 93
           GG G G G  GV G      +GV G     +  P  P  G PGA     ++    A A  
Sbjct: 325 GGPGFGPGVVGVPG------AGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAA 378

Query: 94  RPQQASPPPCGGPGG-------PGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGP 146
           +  +    P  G GG        GG PG   G    G+     V GVGG  GVGG   G 
Sbjct: 379 KAAKYGARPGVGVGGIPTYGVGAGGFPG--FGVGVGGIPGVAGVPGVGGVPGVGG-VPGV 435

Query: 147 GHSKRRRQAPGVGAV--GGGSP 166
           G S   + A    A   G G+P
Sbjct: 436 GISPEAQAAAAAKAAKYGVGTP 457



 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 53/148 (35%), Positives = 57/148 (38%), Gaps = 27/148 (18%)

Query: 20  PPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGA 77
           P  PG +P A   G  GGV   G G G  GG      G +G       P   PL   PG 
Sbjct: 23  PSRPGGVPGAIPGGVPGGVFYPGAGLGALGG------GALG-------PGGKPLKPVPGG 69

Query: 78  LHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG--GPGDALGAAAAGVGAAGVVVGVGG 135
           L    L    GA  G  P    P    G   PGG      A  AA AG G  G V GVGG
Sbjct: 70  LAGAGL----GAGLGAFPAVTFP----GALVPGGVADAAAAYKAAKAGAGLGG-VPGVGG 120

Query: 136 -AVGVGGCCSGPGHSKRRRQAPGVGAVG 162
             V  G     PG   +  + PGVG  G
Sbjct: 121 LGVSAGAVVPQPGAGVKPGKVPGVGLPG 148



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 53/173 (30%), Positives = 62/173 (35%), Gaps = 39/173 (22%)

Query: 34  GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVP--PGAVA 91
           G  G  G  TG G G +   +    A  +      G LPG  GA       VP  PGA+ 
Sbjct: 237 GAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGA------GVPGVPGAIP 290

Query: 92  G-------PRPQQASPPPCGG------------PGGPGGGPG----DALGAAAAGVGAAG 128
           G         P  A+                  PGGPG GPG       G    GV  AG
Sbjct: 291 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAG 350

Query: 129 VVV----GVGGAVGVGGCCSGPGHSKRRRQAPGVGA---VGGGSPEREEVGAG 174
           + V    G+ GA  V G  S    +K   +A   GA   VG G      VGAG
Sbjct: 351 IPVVPGAGIPGA-AVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAG 402



 Score = 37.4 bits (85), Expect = 0.037
 Identities = 59/168 (35%), Positives = 63/168 (37%), Gaps = 32/168 (19%)

Query: 33  GGGVGVGG-----GGTGVGGGDRDRDSGVVGARPRASPPPQGPLP----GPPGALHRWAL 83
           G GVGVGG     G  GVGG         VG  P A             G P A    A 
Sbjct: 406 GFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAA--AK 463

Query: 84  AVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA---GVVVGVGGAVGVG 140
           A    A  G  P     P  G   G G  PG  L   A GVG A   GV  GVG A G+G
Sbjct: 464 AAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGL---APGVGVAPGVGVAPGVGVAPGIG 520

Query: 141 -GCCSGPGHSKRR-------RQAPGVGA------VGGGSPEREEVGAG 174
            G  +    S  +       R A G+GA      VG G P    VGAG
Sbjct: 521 PGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-GVGAG 567



 Score = 37.4 bits (85), Expect = 0.037
 Identities = 52/171 (30%), Positives = 63/171 (36%), Gaps = 29/171 (16%)

Query: 35  GVGVGGGGTGVGGGDRDRDSGVVGARPRAS-PPPQGPLPG---PPGALHRWALAVPPGAV 90
           GVGV  G  GV  G        VG  P     P  G  PG    PG     A  + PG V
Sbjct: 476 GVGVAPG-VGVAPG--------VGVAPGVGLAPGVGVAPGVGVAPGV--GVAPGIGPGGV 524

Query: 91  AGPRPQQA---SPPPCGGPGGPGGG-PGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGP 146
           A      A   +        G G G PG  +G    G+G    V G+G   GV G  + P
Sbjct: 525 AAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVP 584

Query: 147 GHSKRRRQAP----------GVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187
           G     + A           G+GA+GG       VGAG  +      AAA+
Sbjct: 585 GALAAAKAAKYGAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAK 635


>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
          Length = 947

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 54/183 (29%), Positives = 68/183 (37%), Gaps = 28/183 (15%)

Query: 1   MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
           +  L  ++P PP+  P      P  +   P  G G G GG G G GGG  +R+ G     
Sbjct: 132 LAALGGRRPGPPEEPPRELESVPSKLGEPPPLGEGGGGGGEGGGAGGGSGEREGGA---- 187

Query: 61  PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120
               PPP      P G   +   A   G   G   + ASP P     G   G     G+ 
Sbjct: 188 --PQPPP------PRGWRGKGVRAQQRGGSGG---EGASPSPSSSSAGKTPG----TGSR 232

Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSG---PGHSKRRRQAPGVGAV------GGGSPEREEV 171
            +G G AG   G GG+    GC        H K+ R A    A       GGGS  R   
Sbjct: 233 NSGSGVAGGGSGGGGSYWKEGCLQSELIQFHLKKERAAAAAAAAQMHAKNGGGSSSRSSP 292

Query: 172 GAG 174
            +G
Sbjct: 293 VSG 295


>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
          Length = 1263

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 50/147 (34%), Positives = 56/147 (38%), Gaps = 37/147 (25%)

Query: 2   TILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG-----GGTGVG-----GGDR- 50
           TI+P   PPP   D    PPPP P PP P   GGV +       GGT +       GD  
Sbjct: 585 TIIP---PPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDAT 641

Query: 51  -----DRDSGVVGARPRASP-----PPQGPLPG-----PPGALHRWALAVPPGAVAGPRP 95
                    GV    P + P     PP  PLPG     PP      +  +PP     P  
Sbjct: 642 IPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGE 701

Query: 96  QQASPPPCGGPGGPG--------GGPG 114
               PPP   PGGPG        GGPG
Sbjct: 702 AGMPPPPPPLPGGPGIPPPPPFPGGPG 728



 Score = 33.1 bits (74), Expect = 0.71
 Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%)

Query: 62  RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG 111
           RA  PP  PLPG  G +    +  PP       P    PPP   P  PGG
Sbjct: 570 RAPVPPAPPLPGDSGTI----IPPPPAPGDSTTPPPPPPPPPPPPPLPGG 615



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 9   PPPPDADPANEPPPPGP-MPPAPRRGGGV 36
           PPP    P   PPPPG  MPP P  G GV
Sbjct: 720 PPPFPGGPGIPPPPPGMGMPPPPPFGFGV 748


>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
          Length = 1272

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 50/147 (34%), Positives = 56/147 (38%), Gaps = 37/147 (25%)

Query: 2   TILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG-----GGTGVG-----GGDR- 50
           TI+P   PPP   D    PPPP P PP P   GGV +       GGT +       GD  
Sbjct: 594 TIIP---PPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDAT 650

Query: 51  -----DRDSGVVGARPRASP-----PPQGPLPG-----PPGALHRWALAVPPGAVAGPRP 95
                    GV    P + P     PP  PLPG     PP      +  +PP     P  
Sbjct: 651 IPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGE 710

Query: 96  QQASPPPCGGPGGPG--------GGPG 114
               PPP   PGGPG        GGPG
Sbjct: 711 AGMPPPPPPLPGGPGIPPPPPFPGGPG 737



 Score = 33.1 bits (74), Expect = 0.71
 Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%)

Query: 62  RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG 111
           RA  PP  PLPG  G +    +  PP       P    PPP   P  PGG
Sbjct: 579 RAPVPPAPPLPGDSGTI----IPPPPAPGDSTTPPPPPPPPPPPPPLPGG 624



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 9   PPPPDADPANEPPPPGP-MPPAPRRGGGV 36
           PPP    P   PPPPG  MPP P  G GV
Sbjct: 729 PPPFPGGPGIPPPPPGMGMPPPPPFGFGV 757


>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
          Length = 1838

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 64/217 (29%), Positives = 71/217 (32%), Gaps = 60/217 (27%)

Query: 5    PKKKPPPPDADPANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGA--- 59
            P  + PP  A     P   GP  PA R G  G VG+ G    VG    D D G +G    
Sbjct: 1107 PGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQ 1166

Query: 60   ------RPRASPP----PQGPL--------------------------------PGPPGA 77
                  +    PP    PQGP+                                PGPPG 
Sbjct: 1167 KGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGP 1226

Query: 78   LHRWALAVPPGAVAGPRP-QQASPPPCGGPGGPGGGPG-DALGAAAAGVGAAGVVVGVGG 135
            +    L  PPG         Q  PP   GP GP G PG D       G+G  G V    G
Sbjct: 1227 VGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAV----G 1282

Query: 136  AVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172
              G  G    PG        PG G   G   ER E G
Sbjct: 1283 EKGEPGEAGEPG-------LPGEGGPPGPKGERGEKG 1312



 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 54/175 (30%), Positives = 62/175 (35%), Gaps = 17/175 (9%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
           P  +P  P AD    P PPG M   P R GG G  G    +      +   ++     A 
Sbjct: 500 PPGRPGLPGADGL--PGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLAL 557

Query: 65  PPPQGPL-----PGPPGALHRWALAVPPGAVA--GPRPQQASPPPCGGPGGPGGGPGDAL 117
             P GP+     PGP G      L   PG V   GPR  Q       GP GP G PG   
Sbjct: 558 RGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQ-------GPPGPAGKPGRRG 610

Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172
            A + G        G  G  G  G    PG  K  R  PG     G   +  E G
Sbjct: 611 RAGSDGARGMPGQTGPKGDRGFDGLAGLPG-EKGHRGDPGPSGPPGPPGDDGERG 664



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 56/173 (32%), Positives = 69/173 (39%), Gaps = 23/173 (13%)

Query: 4   LPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRA 63
           LP +K    D  P+  P PPG       RG    VG  G     G R    G++G  P+ 
Sbjct: 638 LPGEKGHRGDPGPSGPPGPPG---DDGERGDDGEVGPRGLPGEPGPR----GLLG--PKG 688

Query: 64  SPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-GGPGDALGAAAA 122
            P P    PGPPG         P G V GP+ +   P   G PG  G  GP  A+G    
Sbjct: 689 PPGP----PGPPGVTGMDGQPGPKGNV-GPQGEPGPPGQQGNPGAQGLPGPQGAIGPP-- 741

Query: 123 GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGY 175
             G  G  +G  G  G+ G    PGH    ++ P  G  GG  P   +   GY
Sbjct: 742 --GEKG-PLGKPGLPGMPGADGPPGHP--GKEGP-PGEKGGQGPPGPQGPIGY 788



 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 52/178 (29%), Positives = 61/178 (34%), Gaps = 12/178 (6%)

Query: 5    PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
            P +K    D      P PPGP  P+   G   G  G   G+G      + G  G      
Sbjct: 1236 PGEKGETGDVGQMGPPGPPGPRGPSGAPGAD-GPQGPPGGIGNPGAVGEKGEPGEAGEPG 1294

Query: 65   PPPQGPLPGPPGALHRWA------LAVPPGAVAGPRPQ--QASPPPCGGPGGPG--GGPG 114
             P +G  PGP G             A PPG    P     + SP P G PG PG  G PG
Sbjct: 1295 LPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPG 1354

Query: 115  DALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172
             A      G        G  G+ G  G   GP     +R  PG     G   E+   G
Sbjct: 1355 PAGQDGPPGDKGDDGEPGQTGSPGPTG-EPGPSGPPGKRGPPGPAGPEGRQGEKGAKG 1411



 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 54/197 (27%), Positives = 62/197 (31%), Gaps = 32/197 (16%)

Query: 5    PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-PRA 63
            P  K PP D  P   P P G  P  P   G  G  G     G    D + G  G+  P  
Sbjct: 1323 PGPKGPPGDDGPKGSPGPVG-FPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTG 1381

Query: 64   SPPPQGPL-----PGPPGALHRWA---------LAVPPGAVA--GPRPQQASPPPCG--- 104
             P P GP      PGP G   R           L  PPG     GP+     P P G   
Sbjct: 1382 EPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRG 1441

Query: 105  -----------GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRR 153
                       G  GP G PG        G+       G  G  G+ G    PG    + 
Sbjct: 1442 IPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKG 1501

Query: 154  QAPGVGAVGGGSPEREE 170
                 G  G   P+ E+
Sbjct: 1502 DRGLPGPQGSSGPKGEQ 1518



 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 41/118 (34%), Positives = 50/118 (42%), Gaps = 17/118 (14%)

Query: 12  PDADPANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGARPRASPPPQG 69
           P  DP + P   GP  PA +     G+GG  G  G  G     + G++   P   P P+G
Sbjct: 419 PYYDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGP---PGPEG 475

Query: 70  P--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG---------GGPGDA 116
           P  LPGPPG +        PG   GP  +   P   G PG PG         GG GDA
Sbjct: 476 PAGLPGPPGTMGPTGQVGDPGE-RGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDA 532



 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 53/183 (28%), Positives = 62/183 (33%), Gaps = 10/183 (5%)

Query: 4   LPKKKPPPPDADPANEPPPPGP-----MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVG 58
           LP +  P     P   P PPGP     M   P   G VG  G     G        G+ G
Sbjct: 674 LPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPG 733

Query: 59  ARPRASPPPQ-GPL--PGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGD 115
            +    PP + GPL  PG PG          PG    P  +    PP  GP GP G PG 
Sbjct: 734 PQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPP--GPQGPIGYPGP 791

Query: 116 ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGY 175
                A G+       G  G  G  G     G    R +    G  G   PE  +   G 
Sbjct: 792 RGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGP 851

Query: 176 NSE 178
           N +
Sbjct: 852 NGD 854



 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 47/148 (31%), Positives = 53/148 (35%), Gaps = 17/148 (11%)

Query: 10   PPPDADPANEPPPPGPMPPAPRRG-----GGVGVGGGGTGVGGGDRDRDSGVVG-ARPRA 63
            P  +  P  E   PGP  P   +G     G  G  G     G   +D   G+ G    R 
Sbjct: 1004 PTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRG 1063

Query: 64   SPPPQGPL--------PGPPGALHRWALAVPPGAVAGPRPQQASPPPCG--GPGGPGGGP 113
             P P G L        PGPPG         P GA AGP      P P G  GP G  G P
Sbjct: 1064 LPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGA-AGPIGIPGRPGPQGPPGPAGEKGAP 1122

Query: 114  GDALGAAAAGVGAAGVVVGVGGAVGVGG 141
            G+      AG       VG+ G  G  G
Sbjct: 1123 GEKGPQGPAGRDGLQGPVGLPGPAGPVG 1150



 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 55/178 (30%), Positives = 59/178 (33%), Gaps = 23/178 (12%)

Query: 7    KKPPPPDADPANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
            +K  P +A     P   GP  P   RG  G  G  G     G      D G     P+ S
Sbjct: 1283 EKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDG-----PKGS 1337

Query: 65   PPPQG--PLPGPPGALHRWALAVPPGAVA--GPRPQQASPPPCG-----------GPGGP 109
            P P G    PGPPG         PPG     G   Q  SP P G           GP GP
Sbjct: 1338 PGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGP 1397

Query: 110  GGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG-GGSP 166
             G  G      A G        G  G +G  G    PG    R     VG  G  GSP
Sbjct: 1398 AGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSP 1455



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 48/169 (28%), Positives = 53/169 (31%), Gaps = 35/169 (20%)

Query: 10  PPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQG 69
           PP    PA  P PPG M P     G VG               D G  G   R   P   
Sbjct: 470 PPGPEGPAGLPGPPGTMGPT----GQVG---------------DPGERGPPGRPGLPGAD 510

Query: 70  PLPGPPGALHRWALAVPPGAVAGPRPQQASPPPC----------------GGPGGPGGGP 113
            LPGPPG +         G  AG +    S                     GP G  G P
Sbjct: 511 GLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRP 570

Query: 114 GDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG 162
           G      + G+      VG  G  GV G     G   RR +A   GA G
Sbjct: 571 GPVGPPGSGGLKGEPGDVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARG 619



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 48/152 (31%), Positives = 53/152 (34%), Gaps = 27/152 (17%)

Query: 6    KKKPPPPDA-----DPANEPPPPG----PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGV 56
            K  PP P        P  E  P G    P PP P    G+    G  G  G     D G 
Sbjct: 989  KTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKG-----DPGP 1043

Query: 57   VGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDA 116
             G   +  PP     PG  G          PG V     +    PP  GP GP G PG+ 
Sbjct: 1044 AGLPGKDGPPGLRGFPGDRGL---------PGPVGALGLKGNEGPP--GPPGPAGSPGER 1092

Query: 117  LGAAAAG-VGAAGVVVGVGGAVGVGGCCSGPG 147
              A AAG +G  G   G  G  G  G    PG
Sbjct: 1093 GPAGAAGPIGIPG-RPGPQGPPGPAGEKGAPG 1123



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 55/174 (31%), Positives = 64/174 (36%), Gaps = 26/174 (14%)

Query: 11   PPDADPANEPPPPGPMPPAPRRG--GGVGVGG--GGTGVGGGDRDRD-------SGVVGA 59
            P    P  +  P GP      RG  G  G  G  GG G  G   +R        +G  G 
Sbjct: 903  PGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGP 962

Query: 60   RPRASPPPQGPLPGPPGALHRWAL---AVPPG--AVAGPRPQQASPPPCG--GPGGPGGG 112
            +    PP +  LPG PG            PPG   V GP+       P G  G  GP G 
Sbjct: 963  KGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGP 1022

Query: 113  PGD-ALGAAAAGVGAAG--VVVGVGGAVGVGGCCSGPGHSKRRRQAPG-VGAVG 162
            PG+  L   A   G  G     G+ G  G  G    PG     R  PG VGA+G
Sbjct: 1023 PGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGD----RGLPGPVGALG 1072



 Score = 39.7 bits (91), Expect = 0.008
 Identities = 36/120 (30%), Positives = 44/120 (36%), Gaps = 23/120 (19%)

Query: 10   PPPDADPANEPPP-----PGPMPPAPRRG--GGVG-VGGGGTGVGGGDRDR--------- 52
            P PD  P    PP      G   P   +G  G +G +G  G     GDR           
Sbjct: 1455 PGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSSGP 1514

Query: 53   --DSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG 110
              + G+ G      PP    LPGPPG       + P     GP+ +   P P G PG PG
Sbjct: 1515 KGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGP----TGPKGEAGHPGPPGPPGPPG 1570



 Score = 37.0 bits (84), Expect = 0.049
 Identities = 37/128 (28%), Positives = 44/128 (34%), Gaps = 19/128 (14%)

Query: 22   PPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRW 81
            PPGPM P     G  G+ G     G        G++G            LPGP G+    
Sbjct: 1460 PPGPMGPP----GLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGS---- 1511

Query: 82   ALAVPPGAVAGPRPQQASPPPCG--GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGV 139
                     +GP+ +Q    P G  GP GP G PG      A G        G  G  G 
Sbjct: 1512 ---------SGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGP 1562

Query: 140  GGCCSGPG 147
             G    PG
Sbjct: 1563 PGPPGPPG 1570



 Score = 37.0 bits (84), Expect = 0.049
 Identities = 31/85 (36%), Positives = 33/85 (38%), Gaps = 30/85 (35%)

Query: 16   PANEPPPPG-PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP 74
            P   P PPG P PP P+   G                  SG  G +  A  P  GP PGP
Sbjct: 1526 PIGPPGPPGLPGPPGPKGAKG-----------------SSGPTGPKGEAGHP--GP-PGP 1565

Query: 75   PGALHRWALAVPPGAVAGPRPQQAS 99
            PG         PPG V  P P QAS
Sbjct: 1566 PG---------PPGEVIQPLPIQAS 1581



 Score = 35.4 bits (80), Expect = 0.14
 Identities = 49/190 (25%), Positives = 66/190 (34%), Gaps = 21/190 (11%)

Query: 5   PKKKPPPP--DADPANE--PPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVG 58
           P+ +P PP    +P  +  P P G + P   +G  G  G+ G     G        G  G
Sbjct: 713 PQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPG 772

Query: 59  ARPRASPP-PQGPL--PGPPGALHRWALAVPPGAVAGPRPQQASPPPCG----------- 104
            +    PP PQGP+  PGP G      +    G   G + +   P   G           
Sbjct: 773 EKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGT-KGEKGEDGFPGFKGDMGIKGDRGEI 831

Query: 105 GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGG 164
           GP GP G  G        G       +G  G  G  G    PG+  R+     +G  G  
Sbjct: 832 GPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFP 891

Query: 165 SPEREEVGAG 174
               E+ G G
Sbjct: 892 GANGEKGGRG 901


>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
          Length = 703

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 58/185 (31%), Positives = 67/185 (36%), Gaps = 23/185 (12%)

Query: 6   KKKPPPPDADPANEPPPPGPMPPAPRRGG-GVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
           K +P PP       PP P   P  P  G  G+    G  G  G  R   +G  G   +  
Sbjct: 76  KGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVG 135

Query: 65  PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQ----------QASPPPCG-----GPGGP 109
           PP Q  L G PG      L  PPG    P P           Q  P P G     GP G 
Sbjct: 136 PPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGE 195

Query: 110 GGGPGDALGAAAAGVGAAGV--VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167
            G PGD       GVG  G+    G GGA G  G     G  K     PG+  + G   +
Sbjct: 196 PGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGK-----PGLDGLPGAPGD 250

Query: 168 REEVG 172
           + E G
Sbjct: 251 KGESG 255



 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 54/192 (28%), Positives = 64/192 (33%), Gaps = 16/192 (8%)

Query: 4   LPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRA 63
           LP    PP    P  EP   G       R GG GV G     G        G+ G  P  
Sbjct: 413 LPGAHGPPGPTGPKGEPGFTG-------RPGGPGVAGALGQKGDLGLPGQPGLRG--PSG 463

Query: 64  SPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAG 123
            P  QGP  GP G      L   PG    P   +A  P   GP GP G PG      + G
Sbjct: 464 IPGLQGPA-GPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPG------SPG 516

Query: 124 VGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDEYEA 183
           +       G  G  G  G     G +       GV     G   + + G G  S     A
Sbjct: 517 ITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPA 576

Query: 184 AAARIEAMDPAT 195
             A + +  PA+
Sbjct: 577 FTAVLTSPFPAS 588



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 58/195 (29%), Positives = 73/195 (37%), Gaps = 54/195 (27%)

Query: 10  PPPDADPANEP-------PP-------------PGPMPPAPRRG--------GGVG-VGG 40
           PP    P  EP       PP             PGP  P+  +G        G +G  G 
Sbjct: 256 PPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGY 315

Query: 41  GGTGVGGGDRDRD----SGVVGARPR----ASPPPQGP--LPGPPGALHRWALAVPPGAV 90
           G  G+ G   DR      G++G R        P  QGP  L GPPG          PG+ 
Sbjct: 316 GMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGL---------PGS- 365

Query: 91  AGPRPQQASPPPCG--GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH 148
           AG   ++  P P G  GPGGP G PG       +G+       GV G  G+ G    PG 
Sbjct: 366 AGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGK---PGVPGERGLPGAHGPPGP 422

Query: 149 SKRRRQAPGVGAVGG 163
           +  + +    G  GG
Sbjct: 423 TGPKGEPGFTGRPGG 437



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 56/184 (30%), Positives = 71/184 (38%), Gaps = 28/184 (15%)

Query: 11  PPDADPANEPPP---PGPMPPAPRRG--------GGVG-VGGGGTGVGGGDRDRDS---- 54
           PP  D    P     PGP  P+  +G        G +G  G G  G+ G   DR      
Sbjct: 274 PPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVP 333

Query: 55  GVVGARPR----ASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGG 108
           G++G R        P  QGP  L GPPG      L   PG    P P+  + P  GGP G
Sbjct: 334 GLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGL---PGRRGPPGPKGEAGP--GGPPG 388

Query: 109 PGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPER 168
             G  GD   +  AG        G+ GA G  G  +GP         PG   V G   ++
Sbjct: 389 VPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPG-PTGPKGEPGFTGRPGGPGVAGALGQK 447

Query: 169 EEVG 172
            ++G
Sbjct: 448 GDLG 451



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 59/221 (26%), Positives = 73/221 (33%), Gaps = 78/221 (35%)

Query: 9   PPPP----DADPANEPPPPGP-------------MPPAPRRGGGVGVGG--GGTGVGGGD 49
           P PP    +  P  EP PPG              +P AP +GG  G  G  G  G+G   
Sbjct: 181 PGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPG 240

Query: 50  RDRDSGVVGARPRASPP---------------------------------PQGP------ 70
            D   G  G +  + PP                                 PQGP      
Sbjct: 241 LDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGE 300

Query: 71  --LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAGVGA 126
               GPPG +      +P   + GP+  +    P G PG  G  G PG+       G   
Sbjct: 301 PGTRGPPGLIGPTGYGMP--GLPGPKGDRG---PAGVPGLLGDRGEPGEDGEPGEQG--- 352

Query: 127 AGVVVGVGGAVGVGGCCSGPGHSKRRRQAPG-VGAVGGGSP 166
                G+GG  G+ G    PG    RR  PG  G  G G P
Sbjct: 353 ---PQGLGGPPGLPGSAGLPG----RRGPPGPKGEAGPGGP 386



 Score = 35.4 bits (80), Expect = 0.14
 Identities = 46/166 (27%), Positives = 55/166 (33%), Gaps = 23/166 (13%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDR-DSGVVGARPRA 63
           P  + PP    P     P  P P   R   GV    G  G  G D +  + G  G     
Sbjct: 301 PGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPP 360

Query: 64  SPPPQGPLPG---PPGALHRWALAVPPGAVA-----GPR--------PQQASPPPCGGPG 107
             P    LPG   PPG         PPG        GP         P +   P   GP 
Sbjct: 361 GLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPP 420

Query: 108 GPGGGPGD-ALGAAAAGVGAAGVV-----VGVGGAVGVGGCCSGPG 147
           GP G  G+        G G AG +     +G+ G  G+ G    PG
Sbjct: 421 GPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPG 466



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 39/132 (29%), Positives = 47/132 (35%), Gaps = 25/132 (18%)

Query: 40  GGGTGVGGGDRDRDSGVVGARP--RASPPPQGPLPGPP-----GALHRWALAVPPGAVAG 92
           GGG G          G  G  P     P  +GP+ GPP     G      L + P  + G
Sbjct: 29  GGGAG----------GAAGYAPVKYIQPMQKGPV-GPPFREGKGQYLEMPLPLLPMDLKG 77

Query: 93  PRPQQASPPPCGGPGGPG--GGPGDALGAAAAGVGAAGVV----VGVGGAVGVGGCCSGP 146
                  P P G PG PG  G PG          G AG      +G  G  G+ G    P
Sbjct: 78  EPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPP 137

Query: 147 GHSKRRRQAPGV 158
           G    R + PG+
Sbjct: 138 GQPGLRGE-PGI 148


>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
           sapiens]
          Length = 1487

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 56/171 (32%), Positives = 63/171 (36%), Gaps = 21/171 (12%)

Query: 16  PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPL---- 71
           P N  PP  P PP P      G+GG       G  D  +G  GA+      P GP+    
Sbjct: 158 PGNPGPPGPPGPPGPP-----GLGGNFAAQMAGGFDEKAG--GAQLGVMQGPMGPMGPRG 210

Query: 72  -PGPPGALHRWALAVPPG-----AVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAG 123
            PGP GA         PG      V+GP   +  P P G PG  G  G PG A      G
Sbjct: 211 PPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPG 270

Query: 124 VGAAGVVVGVGGAVGVGGCCSGPG--HSKRRRQAPGVGAVGGGSPEREEVG 172
              A    G  G  GV G    PG   +K    APGV    G   E    G
Sbjct: 271 PQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPG 321



 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 58/175 (33%), Positives = 67/175 (38%), Gaps = 14/175 (8%)

Query: 5    PKKKPPPPDADPANEPPPPGPMPP--APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPR 62
            P  K    +A    +   PGP  P  AP   G  GV G     G       +G  GA  R
Sbjct: 845  PGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGR 904

Query: 63   ASPPPQGPLPGPPGALHRWALAVPPGA--VAGPRPQQASPPPCGGPGGP---GGGPGDAL 117
              PP     PGPPG         P GA   +GP P +A  P   GP GP    G PGD  
Sbjct: 905  VGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGP-PGRAGEPGLQGPAGPPGEKGEPGDDG 963

Query: 118  GAAAAG----VGAAGV--VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
             + A G     G AG   +VG+ G  G  G    PG S    +    GA G   P
Sbjct: 964  PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGP 1018



 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 64/204 (31%), Positives = 71/204 (34%), Gaps = 46/204 (22%)

Query: 6   KKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP 65
           +K  P    D      PPGP  PA  +G     G  G     G R RD G  G      P
Sbjct: 105 QKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRD-GEPGTPGNPGP 163

Query: 66  P-PQGPLPGPPGALHRWALAV---------------------------PPGAVAGPRPQ- 96
           P P GP PGPPG    +A  +                           PPG    P PQ 
Sbjct: 164 PGPPGP-PGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQG 222

Query: 97  -QASPPPCG-----------GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCS 144
            Q +P   G           GP GP G PGD   A   G        G  GA G  G   
Sbjct: 223 FQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPG 282

Query: 145 GPGHSKRRRQAPGV-GAVG-GGSP 166
            PG  K  R  PG+ GA G  G+P
Sbjct: 283 LPG-VKGHRGYPGLDGAKGEAGAP 305



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 64/184 (34%), Positives = 71/184 (38%), Gaps = 40/184 (21%)

Query: 10  PPPDADPANE------PPPPG----PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGA 59
           PP  A PA E      P P G    P PP P   GG     G  G  G       G+VG 
Sbjct: 643 PPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAP-----GLVGP 697

Query: 60  R-------PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGG 112
           R        R SP  QG L GP G         P GA +GP    A PP   GP G  G 
Sbjct: 698 RGERGFPGERGSPGAQG-LQGPRGLPGTPGTDGPKGA-SGP----AGPPGAQGPPGLQGM 751

Query: 113 PGDALGAAAAGVGAAGVV--VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG--GGSPER 168
           PG+         GAAG+    G  G VG  G    PG    R     +G  G  G + E+
Sbjct: 752 PGER--------GAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 803

Query: 169 EEVG 172
            EVG
Sbjct: 804 GEVG 807



 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 56/163 (34%), Positives = 62/163 (38%), Gaps = 23/163 (14%)

Query: 23  PGPMPPA--PRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP--PGAL 78
           PGPM P   P   G  G  G   G  G D     G  G  P   P P GP  GP  PGA 
Sbjct: 320 PGPMGPRGLPGERGRTGPAGAA-GARGND-----GQPG--PAGPPGPVGPAGGPGFPGAP 371

Query: 79  HRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVG 138
                A P GA  GP   Q       GP G  G PG    A A+G      + G  G+ G
Sbjct: 372 GAKGEAGPTGA-RGPEGAQ-------GPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAG 423

Query: 139 VGGCCSGPGHSKRRRQAPGVGAVGGGSPERE--EVG-AGYNSE 178
             G    PG    R      GA G   P+ +  E G AG+  E
Sbjct: 424 APGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGE 466



 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 56/162 (34%), Positives = 58/162 (35%), Gaps = 20/162 (12%)

Query: 16  PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPP 75
           P  EP P GP   AP   G  G  G     GG       G  GA      P Q  L GP 
Sbjct: 469 PKGEPGPAGPQG-APGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPK 527

Query: 76  GALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDALGAAAAGVGAAGVV 130
           GA         P  +AGP+     P   G PG PG     G PGDA        G  G  
Sbjct: 528 GAPGERG----PSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDA--------GPQG-K 574

Query: 131 VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172
           VG  GA G  G    PG    R Q PGV    G      E G
Sbjct: 575 VGPSGAPGEDGRPGPPGPQGARGQ-PGVMGFPGPKGANGEPG 615



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 49/153 (32%), Positives = 58/153 (37%), Gaps = 8/153 (5%)

Query: 19  EPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-PRASPPPQGP--LPGPP 75
           E  PPGP   A   G     G  G     G +  D+G  G + P  +P PQGP  + GP 
Sbjct: 826 ETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG-DAGAPGPQGPSGAPGPQGPTGVTGPK 884

Query: 76  GALHRWALAVPPGAVAGPRPQ-QASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVG 134
           GA  R A   PPGA   P    +  PP   G  GP G PG +      G        G  
Sbjct: 885 GA--RGAQG-PPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRA 941

Query: 135 GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167
           G  G+ G    PG           GA G   P+
Sbjct: 942 GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQ 974



 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 57/177 (32%), Positives = 68/177 (38%), Gaps = 12/177 (6%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPPAPRRG--GGVG-VGGGGTGVGGGDRDRDSGVVGARP 61
           PK +P P  A P   P P G       RG  GGVG +G  G     G+R        A P
Sbjct: 469 PKGEPGP--AGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGP 526

Query: 62  RASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPG--GPGGGPGDAL 117
           + +P  +GP  L GP GA         PG + G R     P   G  G  GP G PG+  
Sbjct: 527 KGAPGERGPSGLAGPKGANGDPGRPGEPG-LPGARGLTGRPGDAGPQGKVGPSGAPGEDG 585

Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHS--KRRRQAPGVGAVGGGSPEREEVG 172
                G   A    GV G  G  G    PG +  K    APG+  + G   E    G
Sbjct: 586 RPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAG 642



 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 58/196 (29%), Positives = 74/196 (37%), Gaps = 41/196 (20%)

Query: 8   KPPPPDADPANEPPP----PGPMPP--APRRGGGVGVGGGGTGVGGGDRDRDSGVVG--- 58
           +P PP    A   P     PGP      P + G  G+ G     G   +D ++G  G   
Sbjct: 586 RPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPG 645

Query: 59  -ARP------RASPPPQG--PLPGPPGALHRWALAVPPGAVAGPR----PQQASPPPCGG 105
            A P      + +P P G   LPGPPG         PPG    P     P +A  P   G
Sbjct: 646 PAGPAGERGEQGAPGPSGFQGLPGPPG---------PPGEGGKPGDQGVPGEAGAPGLVG 696

Query: 106 PGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGV------- 158
           P G  G PG+     A G+     + G  G  G  G  SGP      +  PG+       
Sbjct: 697 PRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKG-ASGPAGPPGAQGPPGLQGMPGER 755

Query: 159 GAVGGGSP--EREEVG 172
           GA G   P  +R +VG
Sbjct: 756 GAAGIAGPKGDRGDVG 771



 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 50/162 (30%), Positives = 59/162 (36%), Gaps = 25/162 (15%)

Query: 22  PPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-PRASPPPQGPLPGPPGALHR 80
           PPGP+ PA    GG G  G     G        G  GA+ PR  P   G  PGP GA   
Sbjct: 355 PPGPVGPA----GGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGS-PGPAGA--- 406

Query: 81  WALAVPPG--AVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAGVGAAGVVVGVGGA 136
              +  PG   + G +    +P   G PG  GP G PG          GA G  +G  G 
Sbjct: 407 ---SGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ--------GATG-PLGPKGQ 454

Query: 137 VGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSE 178
            G  G     G    + +    G  G   P  EE   G   E
Sbjct: 455 TGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGE 496



 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 55/158 (34%), Positives = 65/158 (41%), Gaps = 25/158 (15%)

Query: 16  PANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG 73
           P  EP  PG   PA   G  G  G+ G     G        G+ GA     P P+GP PG
Sbjct: 391 PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGA------PGIAGAP--GFPGPRGP-PG 441

Query: 74  PPGA---LHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVV 130
           P GA   L        PG +AG + +Q  P    GP GP G PG A        GA G  
Sbjct: 442 PQGATGPLGPKGQTGEPG-IAGFKGEQG-PKGEPGPAGPQGAPGPA--GEEGKRGARGEP 497

Query: 131 VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG--GSP 166
            GV G +G  G    PG+    R  PG   + G  G+P
Sbjct: 498 GGV-GPIGPPGERGAPGN----RGFPGQDGLAGPKGAP 530



 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 58/193 (30%), Positives = 68/193 (35%), Gaps = 39/193 (20%)

Query: 13   DADPANEPPPPGPMPPA--PRRGGGVGVGG--GGTGVGGGDRDR-DSGVVGAR----PRA 63
            D  P     PPG   PA  P R G  G  G  G  G  G   DR ++G VGA     P  
Sbjct: 1015 DRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPG 1074

Query: 64   SPPPQGPLP-----GPPGALHRWALAVPPGA--VAGPRPQQASPPPCGGPG--------- 107
            SP P GP       G  GA      + P GA  + GP+  +      G PG         
Sbjct: 1075 SPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRG 1134

Query: 108  -----------GPGGGPGDALGAAAAGV-GAAGVV--VGVGGAVGVGGCCSGPGHSKRRR 153
                       GP G  G +  A  +G  G  G V   G  GA G+ G    PG   R  
Sbjct: 1135 FTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSG 1194

Query: 154  QAPGVGAVGGGSP 166
            +    G  G   P
Sbjct: 1195 ETGPAGPPGNPGP 1207



 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 18/102 (17%)

Query: 9    PPPPDAD--------PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
            PP P  D        P+    PPGP+ P+ + G   G+ G     G   R  ++G  G  
Sbjct: 1144 PPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGAN-GIPGPIGPPGPRGRSGETGPAG-- 1200

Query: 61   PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP 102
            P  +P P GP PGPPG        +   A AG  P++  P P
Sbjct: 1201 PPGNPGPPGP-PGPPGP------GIDMSAFAGLGPREKGPDP 1235



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 47/142 (33%), Positives = 55/142 (38%), Gaps = 30/142 (21%)

Query: 13   DADPANEPPPPGPMPPAPRRG--------GGVGVGG-----------GGTGVGG-GDRDR 52
            D   A    P GP  PA  RG        G  G  G           G TG+ G      
Sbjct: 1087 DRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPG 1146

Query: 53   DSGVVGARPRASPP-PQGPLPGPPGALHRWALAVPPGAVAGPRPQ-------QASPPPCG 104
             SG  GA   A P  P+GP PGP G   +      PG +  P P+        A PP   
Sbjct: 1147 PSGDQGASGPAGPSGPRGP-PGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNP 1205

Query: 105  GPGGPGGGPGDALGAAA-AGVG 125
            GP GP G PG  +  +A AG+G
Sbjct: 1206 GPPGPPGPPGPGIDMSAFAGLG 1227



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 51/176 (28%), Positives = 57/176 (32%), Gaps = 22/176 (12%)

Query: 11  PPDADPAN----EPPPPGPMPPAPRRG-----GGVGVGGGGTGVGGGDRDRDSGVVGARP 61
           PP    AN    E  PPGP   A  RG     G  G  G     G    D   G  G + 
Sbjct: 793 PPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQG 852

Query: 62  RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDA 116
            A        PGP G         P G V GP+  + +  P G  G PG     G PG  
Sbjct: 853 EAGQKGDAGAPGPQGPSGAPGPQGPTG-VTGPKGARGAQGPPGATGFPGAAGRVGPPGSN 911

Query: 117 LGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172
                 G        G  G  G  G    PG    R   PG+    G   E+ E G
Sbjct: 912 GNPGPPGPPGPS---GKDGPKGARGDSGPPG----RAGEPGLQGPAGPPGEKGEPG 960



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 52/173 (30%), Positives = 58/173 (33%), Gaps = 21/173 (12%)

Query: 16  PANEPPPPGPM-----PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVG-ARPRASPPPQG 69
           PA  P P G       P  P   G +G  G     G    D ++G  G A  R  P PQG
Sbjct: 214 PAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQG 273

Query: 70  P-----LPGPPGALHRWALAVPPGA-----VAGPRPQQASPPPCGGPG--GPGGGPGD-- 115
                  PG PG           GA       G + +  SP   G PG  GP G PG+  
Sbjct: 274 ARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERG 333

Query: 116 -ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167
               A AAG        G  G  G  G   GPG           G  G   PE
Sbjct: 334 RTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPE 386



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 55/183 (30%), Positives = 59/183 (32%), Gaps = 22/183 (12%)

Query: 11   PPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPP--- 67
            P  A  A  PP     P A  R G  G  G     G        G  GAR  + PP    
Sbjct: 883  PKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAG 942

Query: 68   ----QGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP--CGGPG-----------GPG 110
                QGP  GPPG         P GA   P PQ  +      G PG           GP 
Sbjct: 943  EPGLQGPA-GPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPS 1001

Query: 111  GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREE 170
            G PG      A+G       VG  G  G  G     G S      PG     G   +R E
Sbjct: 1002 GEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG-SPGADGPPGRDGAAGVKGDRGE 1060

Query: 171  VGA 173
             GA
Sbjct: 1061 TGA 1063



 Score = 38.1 bits (87), Expect = 0.022
 Identities = 51/169 (30%), Positives = 61/169 (36%), Gaps = 26/169 (15%)

Query: 5   PKKKPPPPDAD-PANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGAR- 60
           P+  P  P  D P     P GP P A    G  G+ G  G  G+ G   DR  G VG + 
Sbjct: 718 PRGLPGTPGTDGPKGASGPAGP-PGAQGPPGLQGMPGERGAAGIAGPKGDR--GDVGEKG 774

Query: 61  PRASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALG 118
           P  +P   G   L GP G         PPG  AG   ++       G  GP G  G A  
Sbjct: 775 PEGAPGKDGGRGLTGPIG---------PPGP-AGANGEK-------GEVGPPGPAGSAGA 817

Query: 119 AAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167
             A G        G  G  G  G    PG    + +A   G  G   P+
Sbjct: 818 RGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQ 866


>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
           sapiens]
          Length = 1418

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 56/171 (32%), Positives = 63/171 (36%), Gaps = 21/171 (12%)

Query: 16  PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPL---- 71
           P N  PP  P PP P      G+GG       G  D  +G  GA+      P GP+    
Sbjct: 89  PGNPGPPGPPGPPGPP-----GLGGNFAAQMAGGFDEKAG--GAQLGVMQGPMGPMGPRG 141

Query: 72  -PGPPGALHRWALAVPPG-----AVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAG 123
            PGP GA         PG      V+GP   +  P P G PG  G  G PG A      G
Sbjct: 142 PPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPG 201

Query: 124 VGAAGVVVGVGGAVGVGGCCSGPG--HSKRRRQAPGVGAVGGGSPEREEVG 172
              A    G  G  GV G    PG   +K    APGV    G   E    G
Sbjct: 202 PQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPG 252



 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 58/175 (33%), Positives = 67/175 (38%), Gaps = 14/175 (8%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPP--APRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPR 62
           P  K    +A    +   PGP  P  AP   G  GV G     G       +G  GA  R
Sbjct: 776 PGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGR 835

Query: 63  ASPPPQGPLPGPPGALHRWALAVPPGA--VAGPRPQQASPPPCGGPGGP---GGGPGDAL 117
             PP     PGPPG         P GA   +GP P +A  P   GP GP    G PGD  
Sbjct: 836 VGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGP-PGRAGEPGLQGPAGPPGEKGEPGDDG 894

Query: 118 GAAAAG----VGAAGV--VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
            + A G     G AG   +VG+ G  G  G    PG S    +    GA G   P
Sbjct: 895 PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGP 949



 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 64/204 (31%), Positives = 71/204 (34%), Gaps = 46/204 (22%)

Query: 6   KKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP 65
           +K  P    D      PPGP  PA  +G     G  G     G R RD G  G      P
Sbjct: 36  QKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRD-GEPGTPGNPGP 94

Query: 66  P-PQGPLPGPPGALHRWALAV---------------------------PPGAVAGPRPQ- 96
           P P GP PGPPG    +A  +                           PPG    P PQ 
Sbjct: 95  PGPPGP-PGPPGLGGNFAAQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQG 153

Query: 97  -QASPPPCG-----------GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCS 144
            Q +P   G           GP GP G PGD   A   G        G  GA G  G   
Sbjct: 154 FQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPG 213

Query: 145 GPGHSKRRRQAPGV-GAVG-GGSP 166
            PG  K  R  PG+ GA G  G+P
Sbjct: 214 LPG-VKGHRGYPGLDGAKGEAGAP 236



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 64/184 (34%), Positives = 71/184 (38%), Gaps = 40/184 (21%)

Query: 10  PPPDADPANE------PPPPG----PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGA 59
           PP  A PA E      P P G    P PP P   GG     G  G  G       G+VG 
Sbjct: 574 PPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAP-----GLVGP 628

Query: 60  R-------PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGG 112
           R        R SP  QG L GP G         P GA +GP    A PP   GP G  G 
Sbjct: 629 RGERGFPGERGSPGAQG-LQGPRGLPGTPGTDGPKGA-SGP----AGPPGAQGPPGLQGM 682

Query: 113 PGDALGAAAAGVGAAGVV--VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG--GGSPER 168
           PG+         GAAG+    G  G VG  G    PG    R     +G  G  G + E+
Sbjct: 683 PGER--------GAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEK 734

Query: 169 EEVG 172
            EVG
Sbjct: 735 GEVG 738



 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 56/163 (34%), Positives = 62/163 (38%), Gaps = 23/163 (14%)

Query: 23  PGPMPPA--PRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGP--PGAL 78
           PGPM P   P   G  G  G   G  G D     G  G  P   P P GP  GP  PGA 
Sbjct: 251 PGPMGPRGLPGERGRTGPAGAA-GARGND-----GQPG--PAGPPGPVGPAGGPGFPGAP 302

Query: 79  HRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVG 138
                A P GA  GP   Q       GP G  G PG    A A+G      + G  G+ G
Sbjct: 303 GAKGEAGPTGA-RGPEGAQ-------GPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAG 354

Query: 139 VGGCCSGPGHSKRRRQAPGVGAVGGGSPERE--EVG-AGYNSE 178
             G    PG    R      GA G   P+ +  E G AG+  E
Sbjct: 355 APGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGE 397



 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 56/162 (34%), Positives = 58/162 (35%), Gaps = 20/162 (12%)

Query: 16  PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPP 75
           P  EP P GP   AP   G  G  G     GG       G  GA      P Q  L GP 
Sbjct: 400 PKGEPGPAGPQG-APGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPK 458

Query: 76  GALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDALGAAAAGVGAAGVV 130
           GA         P  +AGP+     P   G PG PG     G PGDA        G  G  
Sbjct: 459 GAPGERG----PSGLAGPKGANGDPGRPGEPGLPGARGLTGRPGDA--------GPQG-K 505

Query: 131 VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172
           VG  GA G  G    PG    R Q PGV    G      E G
Sbjct: 506 VGPSGAPGEDGRPGPPGPQGARGQ-PGVMGFPGPKGANGEPG 546



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 49/153 (32%), Positives = 58/153 (37%), Gaps = 8/153 (5%)

Query: 19  EPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-PRASPPPQGP--LPGPP 75
           E  PPGP   A   G     G  G     G +  D+G  G + P  +P PQGP  + GP 
Sbjct: 757 ETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKG-DAGAPGPQGPSGAPGPQGPTGVTGPK 815

Query: 76  GALHRWALAVPPGAVAGPRPQ-QASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVG 134
           GA  R A   PPGA   P    +  PP   G  GP G PG +      G        G  
Sbjct: 816 GA--RGAQG-PPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRA 872

Query: 135 GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167
           G  G+ G    PG           GA G   P+
Sbjct: 873 GEPGLQGPAGPPGEKGEPGDDGPSGAEGPPGPQ 905



 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 57/177 (32%), Positives = 68/177 (38%), Gaps = 12/177 (6%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPPAPRRG--GGVG-VGGGGTGVGGGDRDRDSGVVGARP 61
           PK +P P  A P   P P G       RG  GGVG +G  G     G+R        A P
Sbjct: 400 PKGEPGP--AGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGP 457

Query: 62  RASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPG--GPGGGPGDAL 117
           + +P  +GP  L GP GA         PG + G R     P   G  G  GP G PG+  
Sbjct: 458 KGAPGERGPSGLAGPKGANGDPGRPGEPG-LPGARGLTGRPGDAGPQGKVGPSGAPGEDG 516

Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHS--KRRRQAPGVGAVGGGSPEREEVG 172
                G   A    GV G  G  G    PG +  K    APG+  + G   E    G
Sbjct: 517 RPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAG 573



 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 58/196 (29%), Positives = 74/196 (37%), Gaps = 41/196 (20%)

Query: 8   KPPPPDADPANEPPP----PGPMPP--APRRGGGVGVGGGGTGVGGGDRDRDSGVVG--- 58
           +P PP    A   P     PGP      P + G  G+ G     G   +D ++G  G   
Sbjct: 517 RPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPG 576

Query: 59  -ARP------RASPPPQG--PLPGPPGALHRWALAVPPGAVAGPR----PQQASPPPCGG 105
            A P      + +P P G   LPGPPG         PPG    P     P +A  P   G
Sbjct: 577 PAGPAGERGEQGAPGPSGFQGLPGPPG---------PPGEGGKPGDQGVPGEAGAPGLVG 627

Query: 106 PGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGV------- 158
           P G  G PG+     A G+     + G  G  G  G  SGP      +  PG+       
Sbjct: 628 PRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKG-ASGPAGPPGAQGPPGLQGMPGER 686

Query: 159 GAVGGGSP--EREEVG 172
           GA G   P  +R +VG
Sbjct: 687 GAAGIAGPKGDRGDVG 702



 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 50/162 (30%), Positives = 59/162 (36%), Gaps = 25/162 (15%)

Query: 22  PPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-PRASPPPQGPLPGPPGALHR 80
           PPGP+ PA    GG G  G     G        G  GA+ PR  P   G  PGP GA   
Sbjct: 286 PPGPVGPA----GGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGS-PGPAGA--- 337

Query: 81  WALAVPPG--AVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAGVGAAGVVVGVGGA 136
              +  PG   + G +    +P   G PG  GP G PG          GA G  +G  G 
Sbjct: 338 ---SGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ--------GATG-PLGPKGQ 385

Query: 137 VGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSE 178
            G  G     G    + +    G  G   P  EE   G   E
Sbjct: 386 TGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGE 427



 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 55/158 (34%), Positives = 65/158 (41%), Gaps = 25/158 (15%)

Query: 16  PANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG 73
           P  EP  PG   PA   G  G  G+ G     G        G+ GA     P P+GP PG
Sbjct: 322 PRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGA------PGIAGAP--GFPGPRGP-PG 372

Query: 74  PPGA---LHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVV 130
           P GA   L        PG +AG + +Q  P    GP GP G PG A        GA G  
Sbjct: 373 PQGATGPLGPKGQTGEPG-IAGFKGEQG-PKGEPGPAGPQGAPGPA--GEEGKRGARGEP 428

Query: 131 VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG--GSP 166
            GV G +G  G    PG+    R  PG   + G  G+P
Sbjct: 429 GGV-GPIGPPGERGAPGN----RGFPGQDGLAGPKGAP 461



 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 58/193 (30%), Positives = 68/193 (35%), Gaps = 39/193 (20%)

Query: 13   DADPANEPPPPGPMPPA--PRRGGGVGVGG--GGTGVGGGDRDR-DSGVVGAR----PRA 63
            D  P     PPG   PA  P R G  G  G  G  G  G   DR ++G VGA     P  
Sbjct: 946  DRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGPPG 1005

Query: 64   SPPPQGPLP-----GPPGALHRWALAVPPGA--VAGPRPQQASPPPCGGPG--------- 107
            SP P GP       G  GA      + P GA  + GP+  +      G PG         
Sbjct: 1006 SPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRG 1065

Query: 108  -----------GPGGGPGDALGAAAAGV-GAAGVV--VGVGGAVGVGGCCSGPGHSKRRR 153
                       GP G  G +  A  +G  G  G V   G  GA G+ G    PG   R  
Sbjct: 1066 FTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSG 1125

Query: 154  QAPGVGAVGGGSP 166
            +    G  G   P
Sbjct: 1126 ETGPAGPPGNPGP 1138



 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 18/102 (17%)

Query: 9    PPPPDAD--------PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR 60
            PP P  D        P+    PPGP+ P+ + G   G+ G     G   R  ++G  G  
Sbjct: 1075 PPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGAN-GIPGPIGPPGPRGRSGETGPAG-- 1131

Query: 61   PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP 102
            P  +P P GP PGPPG        +   A AG  P++  P P
Sbjct: 1132 PPGNPGPPGP-PGPPGP------GIDMSAFAGLGPREKGPDP 1166



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 47/142 (33%), Positives = 55/142 (38%), Gaps = 30/142 (21%)

Query: 13   DADPANEPPPPGPMPPAPRRG--------GGVGVGG-----------GGTGVGG-GDRDR 52
            D   A    P GP  PA  RG        G  G  G           G TG+ G      
Sbjct: 1018 DRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPG 1077

Query: 53   DSGVVGARPRASPP-PQGPLPGPPGALHRWALAVPPGAVAGPRPQ-------QASPPPCG 104
             SG  GA   A P  P+GP PGP G   +      PG +  P P+        A PP   
Sbjct: 1078 PSGDQGASGPAGPSGPRGP-PGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNP 1136

Query: 105  GPGGPGGGPGDALGAAA-AGVG 125
            GP GP G PG  +  +A AG+G
Sbjct: 1137 GPPGPPGPPGPGIDMSAFAGLG 1158



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 51/176 (28%), Positives = 57/176 (32%), Gaps = 22/176 (12%)

Query: 11  PPDADPAN----EPPPPGPMPPAPRRG-----GGVGVGGGGTGVGGGDRDRDSGVVGARP 61
           PP    AN    E  PPGP   A  RG     G  G  G     G    D   G  G + 
Sbjct: 724 PPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQG 783

Query: 62  RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDA 116
            A        PGP G         P G V GP+  + +  P G  G PG     G PG  
Sbjct: 784 EAGQKGDAGAPGPQGPSGAPGPQGPTG-VTGPKGARGAQGPPGATGFPGAAGRVGPPGSN 842

Query: 117 LGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVG 172
                 G        G  G  G  G    PG    R   PG+    G   E+ E G
Sbjct: 843 GNPGPPGPPGPS---GKDGPKGARGDSGPPG----RAGEPGLQGPAGPPGEKGEPG 891



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 52/173 (30%), Positives = 58/173 (33%), Gaps = 21/173 (12%)

Query: 16  PANEPPPPGPM-----PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVG-ARPRASPPPQG 69
           PA  P P G       P  P   G +G  G     G    D ++G  G A  R  P PQG
Sbjct: 145 PAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQG 204

Query: 70  P-----LPGPPGALHRWALAVPPGA-----VAGPRPQQASPPPCGGPG--GPGGGPGD-- 115
                  PG PG           GA       G + +  SP   G PG  GP G PG+  
Sbjct: 205 ARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERG 264

Query: 116 -ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167
               A AAG        G  G  G  G   GPG           G  G   PE
Sbjct: 265 RTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPE 317



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 55/183 (30%), Positives = 59/183 (32%), Gaps = 22/183 (12%)

Query: 11  PPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPP--- 67
           P  A  A  PP     P A  R G  G  G     G        G  GAR  + PP    
Sbjct: 814 PKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAG 873

Query: 68  ----QGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP--CGGPG-----------GPG 110
               QGP  GPPG         P GA   P PQ  +      G PG           GP 
Sbjct: 874 EPGLQGPA-GPPGEKGEPGDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPS 932

Query: 111 GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREE 170
           G PG      A+G       VG  G  G  G     G S      PG     G   +R E
Sbjct: 933 GEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREG-SPGADGPPGRDGAAGVKGDRGE 991

Query: 171 VGA 173
            GA
Sbjct: 992 TGA 994



 Score = 38.1 bits (87), Expect = 0.022
 Identities = 51/169 (30%), Positives = 61/169 (36%), Gaps = 26/169 (15%)

Query: 5   PKKKPPPPDAD-PANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGAR- 60
           P+  P  P  D P     P GP P A    G  G+ G  G  G+ G   DR  G VG + 
Sbjct: 649 PRGLPGTPGTDGPKGASGPAGP-PGAQGPPGLQGMPGERGAAGIAGPKGDR--GDVGEKG 705

Query: 61  PRASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALG 118
           P  +P   G   L GP G         PPG  AG   ++       G  GP G  G A  
Sbjct: 706 PEGAPGKDGGRGLTGPIG---------PPGP-AGANGEK-------GEVGPPGPAGSAGA 748

Query: 119 AAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167
             A G        G  G  G  G    PG    + +A   G  G   P+
Sbjct: 749 RGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQ 797


>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
           sapiens]
          Length = 940

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 62/189 (32%), Positives = 69/189 (36%), Gaps = 41/189 (21%)

Query: 17  ANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQ-------- 68
           AN  PP GP  P   +    G GG   G  GG      G VG R    PPP         
Sbjct: 626 ANGFPPGGPGGPKGMQHFPPGPGGPMPGPHGG----PGGPVGPRLLGPPPPPRGGDPFWD 681

Query: 69  --------GPL---PGP-PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGG-PGGGPGD 115
                   GP+   PGP PG  HR       G   G  P    PP  G  GG  GGGP +
Sbjct: 682 GPGDPMRGGPMRGGPGPGPGPYHRGR-----GGRGGNEPPPPPPPFRGARGGRSGGGPPN 736

Query: 116 ALGAAAAG-VGAAGVVVGVGGAVGVG---------GCCSGPGHSKRRRQAPGVGAVGGGS 165
             G    G VG  G     G   G+G         G   G G   R  + PG G++GGG 
Sbjct: 737 GRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPG-GSMGGGG 795

Query: 166 PEREEVGAG 174
             R   G G
Sbjct: 796 GHRPHEGPG 804



 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 60/194 (30%), Positives = 68/194 (35%), Gaps = 32/194 (16%)

Query: 9   PPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVG------GGDRDRDSGVVGARPR 62
           P  P      +  PPGP  P P   GG G   G   +G      GGD   D    G   R
Sbjct: 631 PGGPGGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDGP--GDPMR 688

Query: 63  ASPPPQGPLPGPPGALHRWALA-------VPPGAVAGPRPQQASPPPCGGPGGPGGG--- 112
             P   GP PGP G  HR            PP    G R  ++   P  G GGPGGG   
Sbjct: 689 GGPMRGGPGPGP-GPYHRGRGGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVG 747

Query: 113 -----PGDALGAAAAGVGAAGVVVGVGGAVGVG-------GCCSGPGHSKRRRQAPGVGA 160
                P +  G             G GG +G G       G   G G   R  + PG G 
Sbjct: 748 GGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPG-GG 806

Query: 161 VGGGSPEREEVGAG 174
           + GGS  R   G G
Sbjct: 807 ISGGSGHRPHEGPG 820



 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 54/176 (30%), Positives = 64/176 (36%), Gaps = 19/176 (10%)

Query: 9   PPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPP- 67
           PPP   DP  + P        P RGG +  GG G G G   R R  G  G  P   PPP 
Sbjct: 671 PPPRGGDPFWDGPGD------PMRGGPMR-GGPGPGPGPYHRGR-GGRGGNEPPPPPPPF 722

Query: 68  QGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG-----GPGDALGAAAA 122
           +G   G  G         P G + G    +    P GG G   G     GPG  +G+   
Sbjct: 723 RGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHR 782

Query: 123 GVGAAGVVVGVGGAVGV-----GGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGA 173
                G  +G GG         GG   G GH        G+GA GG  P     G+
Sbjct: 783 PHEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGS 838



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 56/162 (34%), Positives = 66/162 (40%), Gaps = 26/162 (16%)

Query: 18  NEPPPPGPM---PPAPRRGGGVGVGGGGTG---VGGGDRDRDSGVVGARPRASP--PPQG 69
           NEPPPP P        R GGG   G GG G   VGGG      G  G    +S   P +G
Sbjct: 713 NEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEG 772

Query: 70  PLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGG-----GPGDALGAAAAGV 124
           P  G  G+ HR     P G++ G    +    P GG  G  G     GPG  +GA     
Sbjct: 773 P-GGGMGSGHR-PHEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGMGAG---- 826

Query: 125 GAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
           G      G GG++G  G     GH  R  + PG G   G  P
Sbjct: 827 GGHRPHEGPGGSMGGSG-----GH--RPHEGPGHGGPHGHRP 861



 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 53/160 (33%), Positives = 59/160 (36%), Gaps = 31/160 (19%)

Query: 24  GPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPP------PQGPL-PGPPG 76
           GP  P    GGG+ V    T + G      S  +  +P  S        P G L PGP  
Sbjct: 570 GPQGPG---GGGINVQEILTSIMGSPNSHPSEELLKQPDYSDKIKQMLVPHGLLGPGPI- 625

Query: 77  ALHRWALAVPPGAVAGPRPQQASPPPCGGP-GGPGGGPGDALGAAAAGV-----GAAGVV 130
                A   PPG   GP+  Q  PP  GGP  GP GGPG  +G    G      G     
Sbjct: 626 -----ANGFPPGGPGGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFW 680

Query: 131 VGVG----GAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
            G G    G    GG   GPG   R     G G  GG  P
Sbjct: 681 DGPGDPMRGGPMRGGPGPGPGPYHR-----GRGGRGGNEP 715


>gi|149192871 OTU domain containing 3 [Homo sapiens]
          Length = 398

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 30/179 (16%)

Query: 168 REEVGAGYNSEDEYEAAAARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFR 227
           R E G G   E+E+ + A +++A+                    G  ++++  DG CLFR
Sbjct: 40  RPESGGGGGCEEEFVSFANQLQAL--------------------GLKLREVPGDGNCLFR 79

Query: 228 AVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTED--FTTYINRKRKNNCHGNHIEM 285
           A+ DQ+ G    H   R+  +DY++K  + F  +V +D  F  ++    K      +  +
Sbjct: 80  ALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIPFEKHVASLAKPGTFAGNDAI 139

Query: 286 QAMAEMYNRPVEVYQYSTGTSAVEPINTFHGIHQNEDEPIRVSYHRNIHYNSV--VNPN 342
            A A  +   V ++Q +       P+    G  ++    + ++Y    HY+SV  +N N
Sbjct: 140 VAFARNHQLNVVIHQLNA------PLWQIRGTEKSSVRELHIAYRYGEHYDSVRRINDN 192


>gi|48762934 alpha 2 type I collagen [Homo sapiens]
          Length = 1366

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 52/169 (30%), Positives = 63/169 (37%), Gaps = 35/169 (20%)

Query: 23  PGPMPPAPRRG--GGVGVGG--GGTGVGGGDRDRD-SGVVGARPRASPPPQGPLPGPPGA 77
           PGP+ PA  RG  G +G  G  G TG  G + D+  +G+ GAR    P       GPPG 
Sbjct: 477 PGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPG- 535

Query: 78  LHRWALAVPPGAVAGPRPQQASPPPCG-----GPGGPGGG---------------PGDAL 117
                    P  V G + +Q  P P G     GP GP G                PG A 
Sbjct: 536 ---------PQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAG 586

Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
                G        G  G +G  G    PG    + +   VGAVG   P
Sbjct: 587 PRGERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGP 635



 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 50/171 (29%), Positives = 58/171 (33%), Gaps = 17/171 (9%)

Query: 12  PDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPL 71
           P A   N  P        P   G VG  G     G        G  G    A PP     
Sbjct: 201 PGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGA 260

Query: 72  PGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPG-DALGAAAAGVGAAGVV 130
           PGP G +     A P G  AGPR  +   P   GP GP G PG + L  A    G  GV 
Sbjct: 261 PGPKGEIGAVGNAGPAGP-AGPR-GEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVA 318

Query: 131 --------------VGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPE 167
                         VG  GA G  G    PG +  + ++   G  G   P+
Sbjct: 319 GAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQ 369



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 59/174 (33%), Positives = 65/174 (37%), Gaps = 34/174 (19%)

Query: 10  PPPDADPANEPPPPGPMPPAPRRGGGVG-VGGGGTGVGGGDRDRDSGVVGARPRASPPPQ 68
           P   A P     PPG  P AP   G +G VG  G     G R    G VG      P   
Sbjct: 242 PVGPAGPIGSAGPPG-FPGAPGPKGEIGAVGNAGPAGPAGPR----GEVGL-----PGLS 291

Query: 69  GPLPGPPGALHRWALAVPPGA--VAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAAGV 124
           GP+ GPPG          PGA  + G +     P   G PG  GP G PG         V
Sbjct: 292 GPV-GPPGN---------PGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGP--------V 333

Query: 125 GAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSE 178
           GAAG   G  G VG  G     G S  + +    G  G   P  EE   G N E
Sbjct: 334 GAAG-ATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGE 386



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 55/165 (33%), Positives = 63/165 (38%), Gaps = 34/165 (20%)

Query: 10  PPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQG 69
           P   A PA    PPGP   A  RG G     G  G+        +G  GA  R  PP   
Sbjct: 758 PVGAAGPAGPNGPPGP---AGSRGDG-----GPPGM--------TGFPGAAGRTGPPGPS 801

Query: 70  PLPGPPGALHRWALAVPPG-----AVAGPRPQQASPPPCGGPG--GPGGGPGDALGAAAA 122
            + GPPG         PPG      + GPR  Q      G  G  GP G  G+   +  A
Sbjct: 802 GISGPPG---------PPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEA 852

Query: 123 GVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGV-GAVGGGSP 166
           G        G  G +G  G    PG S+  R  PGV GAVG   P
Sbjct: 853 GTAGPPGTPGPQGLLGAPGILGLPG-SRGERGLPGVAGAVGEPGP 896



 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 56/178 (31%), Positives = 60/178 (33%), Gaps = 27/178 (15%)

Query: 9   PPPPDADPANEPP-PPGP--MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP 65
           P PP  D  + P  PPGP   P  P  GG       G GVG G      G +G      P
Sbjct: 47  PGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLG-----PGPMGLMGPRGP 101

Query: 66  PPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVG 125
           P     PGP G       A  PG      P Q  P    GP GP G  G+       G  
Sbjct: 102 PGAAGAPGPQGF---QGPAGEPG-----EPGQTGPAGARGPAGPPGKAGEDGHPGKPGRP 153

Query: 126 AAGVVVGVGGAVGVGGCCSGPGHS-----------KRRRQAPGVGAVGGGSPEREEVG 172
               VVG  GA G  G    PG             K +  APGV    G   E    G
Sbjct: 154 GERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPG 211



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 52/172 (30%), Positives = 61/172 (35%), Gaps = 20/172 (11%)

Query: 10  PPPDADPANEPPPPGPMPPAPRRG-----GGVGVGGGGTGVG----GGDRDRDSGVVGAR 60
           PP  +  +  P PPGP      RG     G VG  G    VG     G++        A 
Sbjct: 797 PPGPSGISGPPGPPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEAGTAG 856

Query: 61  PRASPPPQGPLPGP-----PGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGD 115
           P  +P PQG L  P     PG+     L    GAV  P P   + PP     G  G PG 
Sbjct: 857 PPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPP-----GARGPPGA 911

Query: 116 ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG-GGSP 166
                  G        G  G  G  G    PGH   R     +G VG  G+P
Sbjct: 912 VGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPVGAAGAP 963



 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 45/159 (28%), Positives = 56/159 (35%), Gaps = 9/159 (5%)

Query: 9   PPPPDADPANEPPPPGPMPPA-PRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPP 67
           PP PD +   EP   G +  A P    G+    G  G+ GG  ++  G  G R     P 
Sbjct: 614 PPGPDGNKG-EPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEK--GEPGLRGEIGNPG 670

Query: 68  QGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAA 127
           +    G PGA+     A  P    G R +  +  P G P GP G PG+      AG    
Sbjct: 671 RDGARGAPGAVG----APGPAGATGDRGEAGAAGPAG-PAGPRGSPGERGEVGPAGPNGF 725

Query: 128 GVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSP 166
               G  G  G  G     G           G VG   P
Sbjct: 726 AGPAGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGP 764



 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 61/181 (33%), Positives = 68/181 (37%), Gaps = 34/181 (18%)

Query: 16  PANEPPPPGPMPPAPRRG--GGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG 73
           PA EP  PG   PA  RG  G  G  G     G   R  + GVVG +     P    LPG
Sbjct: 116 PAGEPGEPGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPG 175

Query: 74  PPGAL-HRW--ALAVPPGAVA-----GPRPQQASPPPCGGPGGPG-----GGPGDALGAA 120
             G   H     L   PGA       G   +  +P   G  G PG     G PG A   A
Sbjct: 176 FKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPA--GA 233

Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPG----VGAVGGGSP-----EREEV 171
               G+ G  VG  G +G  G    PG       APG    +GAVG   P      R EV
Sbjct: 234 RGSDGSVG-PVGPAGPIGSAGPPGFPG-------APGPKGEIGAVGNAGPAGPAGPRGEV 285

Query: 172 G 172
           G
Sbjct: 286 G 286



 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 49/150 (32%), Positives = 56/150 (37%), Gaps = 18/150 (12%)

Query: 27  PPAPRRGGGVGVGG-----GGTGVGG--GDRDRDSGVVGARPRASPPPQGPLPGPPGALH 79
           P AP   G  G  G     G TG  G  G+R R      A  R S    GP+ GP G + 
Sbjct: 192 PGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPV-GPAGPI- 249

Query: 80  RWALAVPPGAVAGPRPQ-------QASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVG 132
               A PPG    P P+        A P    GP G  G PG +      G   A  + G
Sbjct: 250 --GSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGLPGLSGPVGPPGNPGANGLTG 307

Query: 133 VGGAVGVGGCCSGPGHSKRRRQAPGVGAVG 162
             GA G+ G    PG    R     VGA G
Sbjct: 308 AKGAAGLPGVAGAPGLPGPRGIPGPVGAAG 337



 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 57/180 (31%), Positives = 68/180 (37%), Gaps = 19/180 (10%)

Query: 17   ANEPPPPGPMPPAPRRGGGVGVGGGG-TGVGGGDRDRD-SGVVGAR-PRASPPPQGPLPG 73
            A  P P GP+ PA + G     G  G  G  G    R  SG  G R  +  P  +GP  G
Sbjct: 960  AGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPR-G 1018

Query: 74   PPGALHRWALAVPPGAVAGPRPQQASPPPCG-----GPGGPGGGPG-DALGAAAAGVGAA 127
             PG      L   PG +AG    Q +P   G     GP GP G  G D        VG A
Sbjct: 1019 LPGLKGHNGLQGLPG-IAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPA 1077

Query: 128  GVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAGYNSEDEYEAAAAR 187
            G + G  G  G  G    PG        PG   V GG  +    G  Y ++    A + R
Sbjct: 1078 G-IRGPQGHQGPAGPPGPPG-------PPGPPGVSGGGYDFGYDGDFYRADQPRSAPSLR 1129



 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 50/148 (33%), Positives = 59/148 (39%), Gaps = 23/148 (15%)

Query: 8   KPPPPDADPANEPPPPGPMPPAPRRG--GGVGVGG--GGTGVGGGDRDRDSGVVGARPRA 63
           K  P  A P     PPGP     +RG  G  G  G  G  G+ G    R  G+ GA  RA
Sbjct: 360 KGEPGSAGPQG---PPGPSGEEGKRGPNGEAGSAGPPGPPGLRGSPGSR--GLPGADGRA 414

Query: 64  SPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASP--PPCGGPGGPGGGPGDALGAAA 121
                  + GPPG+      A  P  V GP      P  P   GP G  G PG+   A  
Sbjct: 415 G------VMGPPGSRG----ASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGK 464

Query: 122 AG-VGAAGVVVGVGGAVGVGGCCSGPGH 148
            G VG  G + G  G +G  G    PG+
Sbjct: 465 EGPVGLPG-IDGRPGPIGPAGARGEPGN 491



 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 45/143 (31%), Positives = 51/143 (35%), Gaps = 25/143 (17%)

Query: 30  PRRGGGVGVGG--GGTGVGGGDRDR-DSGVVG----ARPRASPPPQGPL--PGPPGALHR 80
           P R G  G  G  G  G  G   DR ++G  G    A PR SP  +G +   GP G    
Sbjct: 669 PGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGP 728

Query: 81  WALAVPPGA--------------VAGPRPQQASPPPCG--GPGGPGGGPGDALGAAAAGV 124
              A  PGA              V GP     +  P G  GP GP G  GD       G 
Sbjct: 729 AGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTGF 788

Query: 125 GAAGVVVGVGGAVGVGGCCSGPG 147
             A    G  G  G+ G    PG
Sbjct: 789 PGAAGRTGPPGPSGISGPPGPPG 811



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 59/194 (30%), Positives = 66/194 (34%), Gaps = 35/194 (18%)

Query: 11  PPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGP 70
           P  A P  E  PPG    A   G  +G  G     G      + GVVGA   A P     
Sbjct: 582 PGPAGPRGERGPPGESGAAGPTGP-IGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSG 640

Query: 71  LPGPPGALHRWALAVPPG----AVAGPRPQQASPPPCGGPGGPG-----------GGPGD 115
           LPG  GA       +P G       G R +  +P   G  G PG           G  G+
Sbjct: 641 LPGERGAA-----GIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGE 695

Query: 116 ALGAAAAG-------VGAAGVV--VGVGGAVGVGGCCSGPGHSKRRRQAPGV----GAVG 162
           A  A  AG        G  G V   G  G  G  G    PG +K  R A G     G VG
Sbjct: 696 AGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPG-AKGERGAKGPKGENGVVG 754

Query: 163 GGSPEREEVGAGYN 176
              P      AG N
Sbjct: 755 PTGPVGAAGPAGPN 768



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 45/147 (30%), Positives = 51/147 (34%), Gaps = 19/147 (12%)

Query: 11   PPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGP 70
            P  A    EP P G   P   RG    VG  G     G+  RD    G      PP +  
Sbjct: 885  PGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRD----GNPGNDGPPGRDG 940

Query: 71   LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVV 130
             PG  G         P GA   P P         GP GP G  G+      +G       
Sbjct: 941  QPGHKGERGYPGNIGPVGAAGAPGPH--------GPVGPAGKHGNRGETGPSGP------ 986

Query: 131  VGVGGAVGVGGCCSGPGHSKRRRQAPG 157
            VG  GAVG  G  SGP   +  +  PG
Sbjct: 987  VGPAGAVGPRG-PSGPQGIRGDKGEPG 1012



 Score = 38.5 bits (88), Expect = 0.017
 Identities = 38/124 (30%), Positives = 43/124 (34%), Gaps = 30/124 (24%)

Query: 10   PPPDADPANEPPPPGPMPPAPRRG--------GGVGVGG--------GGTGVGG--GDRD 51
            P     PA    P GP  P   RG        G  G+ G        G  G+ G  GD+ 
Sbjct: 983  PSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQG 1042

Query: 52   RDSGVVGARPRASPPPQGPL-----PGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGP 106
                V  A PR    P GP       G PG        V P  + GP+  Q    P G P
Sbjct: 1043 APGSVGPAGPRGPAGPSGPAGKDGRTGHPGT-------VGPAGIRGPQGHQGPAGPPGPP 1095

Query: 107  GGPG 110
            G PG
Sbjct: 1096 GPPG 1099



 Score = 38.1 bits (87), Expect = 0.022
 Identities = 50/186 (26%), Positives = 58/186 (31%), Gaps = 34/186 (18%)

Query: 10  PPPDADPANEPPPPGPM-------------PPAPRRGGGVGVGGGGTGVGGGDRDRDSGV 56
           P   A P   P  PGP              P  PR  G VG+ G    VG       +G+
Sbjct: 248 PIGSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPR--GEVGLPGLSGPVGPPGNPGANGL 305

Query: 57  VGARPRASPPPQGPLPGPPGALHRWALAVPPGAVA--GPRPQQASPPPCG---------- 104
            GA+  A  P     PG PG      +  P GA    G R     P P G          
Sbjct: 306 TGAKGAAGLPGVAGAPGLPGPR---GIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGE 362

Query: 105 ----GPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGA 160
               GP GP G  G+       G   +    G  G  G  G    PG   R       G+
Sbjct: 363 PGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLRGSPGSRGLPGADGRAGVMGPPGS 422

Query: 161 VGGGSP 166
            G   P
Sbjct: 423 RGASGP 428



 Score = 37.0 bits (84), Expect = 0.049
 Identities = 43/145 (29%), Positives = 49/145 (33%), Gaps = 10/145 (6%)

Query: 23  PGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPGALHRWA 82
           PGP+  A   G    VG  G     G+         A P+  P P G   G  G      
Sbjct: 330 PGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGE-EGKRGPNGEAG 388

Query: 83  LAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDALGAAAAGVGAAGVVVGVGGAV 137
            A PPG    P   + SP   G PG  G     G PG    +  AGV       G  G  
Sbjct: 389 SAGPPG----PPGLRGSPGSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGEP 444

Query: 138 GVGGCCSGPGHSKRRRQAPGVGAVG 162
           G+ G    PG       A   G VG
Sbjct: 445 GLMGPRGLPGSPGNIGPAGKEGPVG 469



 Score = 35.0 bits (79), Expect = 0.19
 Identities = 35/114 (30%), Positives = 39/114 (34%), Gaps = 11/114 (9%)

Query: 61  PRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAA 120
           P     P+G   GPPG         PPG      P     PP G PG PG G   A    
Sbjct: 34  PAGDRGPRGER-GPPG---------PPGRDGEDGPTGPPGPP-GPPGPPGLGGNFAAQYD 82

Query: 121 AAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGAG 174
             GVG     +G+ G  G  G    PG    +  A   G  G   P      AG
Sbjct: 83  GKGVGLGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPAG 136


>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
          Length = 1690

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 61/200 (30%), Positives = 68/200 (34%), Gaps = 35/200 (17%)

Query: 9    PPPPDADPANEPPPPG-----------------PMPPAPRRGGGVGVGGGGTGVGGGDRD 51
            PP PD  P   P PPG                 P PP P    G     G  G  G D  
Sbjct: 1265 PPGPDG-PRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPPGPPGPPGYKGFPGCDGKDGQ 1323

Query: 52   RDS----GVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPG 107
            +      G  G      PP +  LPGPPG      L  P G    P      P   G PG
Sbjct: 1324 KGPVGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPRGEPGPPADVDDCPRIPGLPG 1383

Query: 108  GPG-GGPGDALG----AAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVG 162
             PG  GP  A+G       +G G  G   G+ G  GV G    PG   R+      G  G
Sbjct: 1384 APGMRGPEGAMGLPGMRGPSGPGCKG-EPGLDGRRGVDGVPGSPGPPGRKGDTGEDGYPG 1442

Query: 163  G-------GSPEREEVGAGY 175
            G       G P  +  G GY
Sbjct: 1443 GPGPPGPIGDPGPKGFGPGY 1462



 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 50/146 (34%), Positives = 58/146 (39%), Gaps = 21/146 (14%)

Query: 9    PPPPDADPANEPPPPGPM--PPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGARPRAS 64
            P     DPA+   PPGP   P +P   G  G  G  G  G+         G  G+  R  
Sbjct: 1070 PKGNKGDPASHFGPPGPKGEPGSPGCPGHFGASGEQGLPGI--------QGPRGSPGRPG 1121

Query: 65   PPPQGPLPGPPGALHRWALAVPPGAVA--GPRPQQASPPPCGGPG--GPGGGPG----DA 116
            PP     PG PG      L   PG +   GPR  Q  P   G PG  GP G PG      
Sbjct: 1122 PPGSSGPPGCPGDHGMPGLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNGLHG 1181

Query: 117  LGAAAAGVGAAGV-VVGVGGAVGVGG 141
            L       GA+G+  VG  G VG+ G
Sbjct: 1182 LKGQKGTKGASGLHDVGPPGPVGIPG 1207



 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 46/150 (30%), Positives = 51/150 (34%), Gaps = 16/150 (10%)

Query: 9    PPPPDADPA-----NEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRA 63
            PP P   P       +P  PG  PP PR   G     G +G  G      +G  G  P+ 
Sbjct: 1199 PPGPVGIPGLKGERGDPGSPGISPPGPRGKKGPPGPPGSSGPPG-----PAGATGRAPKD 1253

Query: 64   SPPPQGP-LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCG-----GPGGPGGGPGDAL 117
             P P  P   GPPG         PPG        +  P  CG     GP GP G PG   
Sbjct: 1254 IPDPGPPGDQGPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGPPGPPGPPGYKG 1313

Query: 118  GAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147
                 G       VG  G  G  G    PG
Sbjct: 1314 FPGCDGKDGQKGPVGFPGPQGPHGFPGPPG 1343



 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 49/158 (31%), Positives = 62/158 (39%), Gaps = 43/158 (27%)

Query: 12  PDADPANE--PPPPGPM--PPAPRRG--GGVGVGG-----------GGTGVGGGDRDRDS 54
           P  DP N   P PPG +  PP P +G  G  G  G           G  G+ G   +  +
Sbjct: 342 PKGDPGNRGHPGPPGVLVTPPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEACA 401

Query: 55  GVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG--GG 112
           G++G      P PQG  PG PG          PG    P    ++P   G PG PG  G 
Sbjct: 402 GMIGP-----PGPQG-FPGLPGL---------PGEAGIPGRPDSAPGKPGKPGSPGLPGA 446

Query: 113 PGDALGAAAAGVGAAGVV---VGVGGAVGVGGCCSGPG 147
           PG        G+  + V+   VG  G  G+ G    PG
Sbjct: 447 PG------LQGLPGSSVIYCSVGNPGPQGIKGKVGPPG 478



 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 47/150 (31%), Positives = 54/150 (36%), Gaps = 23/150 (15%)

Query: 12  PDADPANEPPPPGPMPPAPRRG--GGVGVGG--------GGTGVGGGDRDRDSGVVGARP 61
           P+      P PPGP  P    G  G +G+ G        G  G  G   D+    V   P
Sbjct: 59  PEKGSRGPPGPPGPQGPIGPLGAPGPIGLSGEKGMRGDRGPPGAAGDKGDKGPTGVPGFP 118

Query: 62  RASPPPQGPLPGPPGALHRWALAVPPGAVA--GPRPQQASPPPCG--GPGGPGGGPGDAL 117
                P    PGPPG   +      PG     G R     P   G  GPGGP G PG+  
Sbjct: 119 GLDGIPGH--PGPPGPRGK------PGMSGHNGSRGDPGFPGGRGALGPGGPLGHPGEK- 169

Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147
           G     V   G V G+ G  G  G    PG
Sbjct: 170 GEKGNSVFILGAVKGIQGDRGDPGLPGLPG 199



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 36/115 (31%), Positives = 40/115 (34%), Gaps = 9/115 (7%)

Query: 5    PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG-----GGTGVGGGDRDRDSGVVGA 59
            P +K P     P  EP PP  +   PR  G  G  G     G  G+ G       G  G 
Sbjct: 1351 PGRKGPTGLPGPRGEPGPPADVDDCPRIPGLPGAPGMRGPEGAMGLPGMRGPSGPGCKGE 1410

Query: 60   RPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPG 114
                       +PG PG   R       G   GP P    P P G PG  G GPG
Sbjct: 1411 PGLDGRRGVDGVPGSPGPPGRKGDTGEDGYPGGPGP----PGPIGDPGPKGFGPG 1461



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 54/173 (31%), Positives = 58/173 (33%), Gaps = 36/173 (20%)

Query: 22  PPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGARPRASPP----PQGP----L 71
           PPG  P  P   G  G  G  G  G  G   D   G  G      PP    P GP     
Sbjct: 576 PPG-FPGQPGSHGRDGHAGEKGDPGPPGDHEDATPGGKGFPGPLGPPGKAGPVGPPGLGF 634

Query: 72  PGPPGALHRWALAVPPGAVAGPR----------------PQQASPPPCGGPGGPGGGPGD 115
           PGPPG      +   PG V GP                 P +  PP   GP GP G PG 
Sbjct: 635 PGPPGERGHPGVPGHPG-VRGPDGLKGQKGDTISCNVTYPGRHGPPGFDGPPGPKGFPGP 693

Query: 116 ALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQA--PGVGAVGGGSP 166
                A G+  +    G  G  G  G    PG    R     PG G   G SP
Sbjct: 694 ---QGAPGLSGSD---GHKGRPGTPGTAEIPGPPGFRGDMGDPGFGGEKGSSP 740



 Score = 40.0 bits (92), Expect = 0.006
 Identities = 63/204 (30%), Positives = 72/204 (35%), Gaps = 44/204 (21%)

Query: 10  PPPDADPANEPPPPGPMPPAPRRGGGVGVGG-----GGTGVGGGDRDRDSGVVGARPRAS 64
           PP  A P   P    P PP  R  G  GV G     G  G+ G   D  S  V    R  
Sbjct: 620 PPGKAGPVGPPGLGFPGPPGER--GHPGVPGHPGVRGPDGLKGQKGDTISCNVTYPGRHG 677

Query: 65  PP----PQGP--LPGPPGAL-------HRWALAVPPGA-VAGP---RPQQASP------- 100
           PP    P GP   PGP GA        H+     P  A + GP   R     P       
Sbjct: 678 PPGFDGPPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTAEIPGPPGFRGDMGDPGFGGEKG 737

Query: 101 -PPCGGPGGPG--------GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKR 151
             P G PG PG        G PGD    A   +G  G   G+ G  G+ G    PG    
Sbjct: 738 SSPVGPPGPPGSPGVNGQKGIPGD---PAFGHLGPPG-KRGLSGVPGIKGPRGDPGCPGA 793

Query: 152 RRQAPGVGAVGGGSPEREEVGAGY 175
              A   G +G   P+  E  AG+
Sbjct: 794 EGPAGIPGFLGLKGPKGREGHAGF 817



 Score = 39.7 bits (91), Expect = 0.008
 Identities = 49/170 (28%), Positives = 57/170 (33%), Gaps = 29/170 (17%)

Query: 1    MTILPKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGG--GDRDRDSGV 56
            M I+ +K  P        EP PPG     P   G  G  G  G  G  G  G      G 
Sbjct: 965  MAIISQKGTP-------GEPGPPGD-DGFPGERGDKGTPGMQGRRGEPGRYGPPGFHRGE 1016

Query: 57   VGARPRASPP-PQGP-----------LPGPPGALHRWALAVPPG-----AVAGPRPQQAS 99
             G + +  PP P GP            PG PG         PPG        GP+  +  
Sbjct: 1017 PGEKGQPGPPGPPGPPGSTGLRGFIGFPGLPGDQGEPGSPGPPGFSGIDGARGPKGNKGD 1076

Query: 100  PPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHS 149
            P    GP GP G PG        G      + G+ G  G  G    PG S
Sbjct: 1077 PASHFGPPGPKGEPGSPGCPGHFGASGEQGLPGIQGPRGSPGRPGPPGSS 1126



 Score = 38.9 bits (89), Expect = 0.013
 Identities = 44/142 (30%), Positives = 52/142 (36%), Gaps = 14/142 (9%)

Query: 10  PPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVG-----ARPRAS 64
           PP  +     P  PG  P  P   G  G  GG    G       +G+ G      RP A 
Sbjct: 823 PPGHSCERGAPGIPG-QPGLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAH 881

Query: 65  PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG-----GGPGDALGA 119
            PP   LPG PG      L  PPG   GPR     P   G  G PG     G  G+    
Sbjct: 882 GPPG--LPGIPGPFGDDGLPGPPGP-KGPRGLPGFPGFPGERGKPGAEGCPGAKGEPGEK 938

Query: 120 AAAGVGAAGVVVGVGGAVGVGG 141
             +G+     + G  GA+G  G
Sbjct: 939 GMSGLPGDRGLRGAKGAIGPPG 960



 Score = 38.5 bits (88), Expect = 0.017
 Identities = 55/198 (27%), Positives = 67/198 (33%), Gaps = 54/198 (27%)

Query: 13  DADPANEPPPPG-------PMPPAPR-----------RGG-GVGVGGGGTGVGG------ 47
           D  P   P  PG       P PP PR           RG  G   G G  G GG      
Sbjct: 108 DKGPTGVPGFPGLDGIPGHPGPPGPRGKPGMSGHNGSRGDPGFPGGRGALGPGGPLGHPG 167

Query: 48  --GDRDRDSGVVGARPRASPPPQGP-LPGPPGALHRWALAVPPGAVAGP-RPQQASPPPC 103
             G++     ++GA          P LPG PG+   W    P G    P  P    PP  
Sbjct: 168 EKGEKGNSVFILGAVKGIQGDRGDPGLPGLPGS---WGAGGPAGPTGYPGEPGLVGPP-- 222

Query: 104 GGPGGPG--GGPGDALGAAAAGVGAAG-----------------VVVGVGGAVGVGGCCS 144
           G PG PG  G PG  +       G  G                 +  G  G  G+ G   
Sbjct: 223 GQPGRPGLKGNPGVGVKGQMGDPGEVGQQGSPGPTLLVEPPDFCLYKGEKGIKGIPGMVG 282

Query: 145 GPGHSKRRRQAPGVGAVG 162
            PG   R+ ++ G+GA G
Sbjct: 283 LPGPPGRKGES-GIGAKG 299



 Score = 38.5 bits (88), Expect = 0.017
 Identities = 40/125 (32%), Positives = 46/125 (36%), Gaps = 6/125 (4%)

Query: 19  EPPPPGPMPPA--PRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPGPPG 76
           +P PPG   P   P + G  G  G     G     R  G  G R    PP     PG PG
Sbjct: 528 DPGPPGAEGPPGLPGKHGASGPPGNKGAKGDMVVSRVKGHKGERGPDGPPG---FPGQPG 584

Query: 77  ALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGA 136
           +  R   A   G    P   + + P   G  GP G PG A      G+G  G   G  G 
Sbjct: 585 SHGRDGHAGEKGDPGPPGDHEDATPGGKGFPGPLGPPGKAGPVGPPGLGFPG-PPGERGH 643

Query: 137 VGVGG 141
            GV G
Sbjct: 644 PGVPG 648



 Score = 37.7 bits (86), Expect = 0.029
 Identities = 50/158 (31%), Positives = 59/158 (37%), Gaps = 41/158 (25%)

Query: 22  PPGPMPPAPRRGGGVGVGG-------------GGTGVGGGDRDR-DSGVVGARPRASPPP 67
           PPGP P +P   G  G+ G             G +GV G    R D G  GA   A  P 
Sbjct: 743 PPGP-PGSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEGPAGIPG 801

Query: 68  ----QGP-----------LPGPPG-ALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG- 110
               +GP           +PGPPG +  R A  +P         Q   P   G PG PG 
Sbjct: 802 FLGLKGPKGREGHAGFPGVPGPPGHSCERGAPGIPG--------QPGLPGYPGSPGAPGG 853

Query: 111 -GGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPG 147
            G PGD      AG+     + G  GA G  G    PG
Sbjct: 854 KGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLPGIPG 891



 Score = 37.4 bits (85), Expect = 0.037
 Identities = 49/145 (33%), Positives = 56/145 (38%), Gaps = 22/145 (15%)

Query: 20  PPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGA-RPRASPPPQGPLPGPPG 76
           P  PGP    P   G  G  G  G  G+ G     D G+ G   P+  P  +G  PGPPG
Sbjct: 304 PGFPGPRGD-PGSYGSPGFPGLKGELGLVG-----DPGLFGLIGPKGDPGNRGH-PGPPG 356

Query: 77  ALHRWALAVPPGAVAGPRPQQASPPPCGGPG--GPGGGPG--DALGAAAAGVGAAGVVVG 132
                 L  PP  + GP      P   G  G  GP G PG     G A AG+       G
Sbjct: 357 -----VLVTPPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEACAGMIGPPGPQG 411

Query: 133 VGGAVGVGGCCSGPGHSKRRRQAPG 157
             G  G+ G    PG   R   APG
Sbjct: 412 FPGLPGLPGEAGIPG---RPDSAPG 433



 Score = 34.7 bits (78), Expect = 0.24
 Identities = 44/137 (32%), Positives = 49/137 (35%), Gaps = 18/137 (13%)

Query: 38  VGGGGTGVGGGDRDRDSGVVGARP-RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQ 96
           V G G    G    RD  V    P + S  P GP PGP G         P G +  P P 
Sbjct: 36  VYGSGKKYIGPCGGRDCSVCHCVPEKGSRGPPGP-PGPQG---------PIGPLGAPGPI 85

Query: 97  QASPPP-CGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRR--R 153
             S      G  GP G  GD       GV     + G+ G  G  G    PG S     R
Sbjct: 86  GLSGEKGMRGDRGPPGAAGDKGDKGPTGVPGFPGLDGIPGHPGPPGPRGKPGMSGHNGSR 145

Query: 154 QAPGV----GAVGGGSP 166
             PG     GA+G G P
Sbjct: 146 GDPGFPGGRGALGPGGP 162



 Score = 34.7 bits (78), Expect = 0.24
 Identities = 36/115 (31%), Positives = 46/115 (40%), Gaps = 25/115 (21%)

Query: 5    PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGG--GGTGVGGGDRDRDSGVVGAR-- 60
            P+ +P PP AD  + P  PG +P AP   G  G  G  G  G  G     + G+ G R  
Sbjct: 1362 PRGEPGPP-ADVDDCPRIPG-LPGAPGMRGPEGAMGLPGMRGPSGPGCKGEPGLDGRRGV 1419

Query: 61   ---PRASPPP-------QGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGG 105
               P +  PP       +   PG PG         PPG +  P P+   P   GG
Sbjct: 1420 DGVPGSPGPPGRKGDTGEDGYPGGPG---------PPGPIGDPGPKGFGPGYLGG 1465



 Score = 33.1 bits (74), Expect = 0.71
 Identities = 43/146 (29%), Positives = 57/146 (39%), Gaps = 15/146 (10%)

Query: 14  ADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGPLPG 73
           A P   P  PG + P P + G  G+ G   GVG   +  D G VG +   SP P   +  
Sbjct: 207 AGPTGYPGEPGLVGP-PGQPGRPGLKGN-PGVGVKGQMGDPGEVGQQ--GSPGPTLLVEP 262

Query: 74  PPGALHRWALAVP--PGAVAGPRPQQ-------ASPPPCGGPG--GPGGGPGDALGAAAA 122
           P   L++    +   PG V  P P          +    G PG  GP G PG        
Sbjct: 263 PDFCLYKGEKGIKGIPGMVGLPGPPGRKGESGIGAKGEKGIPGFPGPRGDPGSYGSPGFP 322

Query: 123 GVGAAGVVVGVGGAVGVGGCCSGPGH 148
           G+     +VG  G  G+ G    PG+
Sbjct: 323 GLKGELGLVGDPGLFGLIGPKGDPGN 348



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 37/138 (26%), Positives = 49/138 (35%), Gaps = 14/138 (10%)

Query: 20  PPPPGPMPPAPRRGGGVGVGGG-GTGVGGGDRDRDSGVVGARPRASPPPQGPL------P 72
           PP P   P  P   G  G+ G   +  G   +    G+ GA      P    +      P
Sbjct: 406 PPGPQGFPGLPGLPGEAGIPGRPDSAPGKPGKPGSPGLPGAPGLQGLPGSSVIYCSVGNP 465

Query: 73  GPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPG-DALGAAAAGVGAAGVV- 130
           GP G   +     PPG   GP+ ++ +   C    GP G PG   L       G  G+  
Sbjct: 466 GPQGIKGKVG---PPGG-RGPKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKGDLGLPG 521

Query: 131 -VGVGGAVGVGGCCSGPG 147
            +G  G  G  G    PG
Sbjct: 522 WLGTKGDPGPPGAEGPPG 539


>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
          Length = 416

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 40/116 (34%), Positives = 46/116 (39%), Gaps = 20/116 (17%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVG------GGDRDRDSGVVG 58
           P+  PP     P   PPPPG     P +GG    G    G        GG + R S    
Sbjct: 242 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPP 301

Query: 59  ARPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109
            +P+  PP  G  P GPP          PPG   GP PQ  +    PPP G P GP
Sbjct: 302 GKPQGPPPQGGNQPQGPPP---------PPGKPQGPPPQGGNKPQGPPPPGKPQGP 348



 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 39/115 (33%), Positives = 45/115 (39%), Gaps = 19/115 (16%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGG-----DRDRDSGVVGA 59
           P+  PP     P   PPPPG     P +GG    G    G   G     D+ R       
Sbjct: 57  PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPG 116

Query: 60  RPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109
           +P+  PP  G  P GPP          PPG   GP PQ  +    PPP G P GP
Sbjct: 117 KPQGPPPQGGNQPQGPPP---------PPGKPQGPPPQGGNKPQGPPPPGKPQGP 162



 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 39/116 (33%), Positives = 46/116 (39%), Gaps = 20/116 (17%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVG------GGDRDRDSGVVG 58
           P+  PP     P   PPPPG     P +GG    G    G        G ++ R S    
Sbjct: 118 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPP 177

Query: 59  ARPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109
            +P+  PP  G  P GPP          PPG   GP PQ  +    PPP G P GP
Sbjct: 178 GKPQGPPPQGGNQPQGPPP---------PPGKPQGPPPQGGNKPQGPPPPGKPQGP 224



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 36/109 (33%), Positives = 43/109 (39%), Gaps = 6/109 (5%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
           P+  PP     P   PPPPG     P +GG    G    G   G   +     G++ R++
Sbjct: 304 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG----GSKSRSA 359

Query: 65  PPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGP 113
             P G   GPP          PP A  G  PQQ   PP G P GP   P
Sbjct: 360 RSPPGKPQGPPQQEGNNPQGPPPPA--GGNPQQPQAPPAGQPQGPPRPP 406



 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 37/116 (31%), Positives = 46/116 (39%), Gaps = 20/116 (17%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVG------GGDRDRDSGVVG 58
           P+  PP     P   PPPPG     P +GG    G    G        G ++ + +    
Sbjct: 180 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPP 239

Query: 59  ARPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109
            +P+  PP  G  P GPP          PPG   GP PQ  +    PPP G P GP
Sbjct: 240 GKPQGPPPQGGNQPQGPPP---------PPGKPQGPPPQGGNKPQGPPPPGKPQGP 286



 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 37/111 (33%), Positives = 43/111 (38%), Gaps = 10/111 (9%)

Query: 6   KKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP 65
           K + PPP  D +  P  P   P  P   GG    G     G        G  G +P+  P
Sbjct: 97  KPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG--GNKPQGPP 154

Query: 66  PPQGPL-PGPPGALHRWALAVPPGAVAGP------RPQQASPPPCGGPGGP 109
           PP  P  P P G     +   PPG   GP      +PQ   PPP G P GP
Sbjct: 155 PPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPP-GKPQGP 204



 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 43/136 (31%), Positives = 51/136 (37%), Gaps = 36/136 (26%)

Query: 9   PPPPDADPANEPP-----PPGPMPPA-----PRRGGGVGVGGG-------GTGVGGGDRD 51
           PPPP   P   PP     P GP PP      P +G               G    GG++ 
Sbjct: 194 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQP 253

Query: 52  RDSGVVGARPRASPP-----PQGPLP-----GPP--GALHRWALAVPPGAVAGP------ 93
           +       +P+  PP     PQGP P     GPP  G     +   PPG   GP      
Sbjct: 254 QGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGN 313

Query: 94  RPQQASPPPCGGPGGP 109
           +PQ   PPP G P GP
Sbjct: 314 QPQGPPPPP-GKPQGP 328



 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 37/111 (33%), Positives = 42/111 (37%), Gaps = 10/111 (9%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
           P+  PP     P   P PPG  P  P   GG    G     G        G  G +P+  
Sbjct: 36  PQGAPPQGGNKPQGPPSPPGK-PQGPPPQGGNQPQGPPPPPGKPQGPPPQG--GNKPQGP 92

Query: 65  PPPQGPLPGPPGALHRWALAVPPGAVAGP------RPQQASPPPCGGPGGP 109
           PPP  P   PP      +   PPG   GP      +PQ   PPP G P GP
Sbjct: 93  PPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPP-GKPQGP 142



 Score = 31.2 bits (69), Expect = 2.7
 Identities = 26/97 (26%), Positives = 31/97 (31%), Gaps = 30/97 (30%)

Query: 9   PPPPDADPANEPP-----PPGPMPPA-----PRRGGGVGVGG------------------ 40
           PPPP   P   PP     P GP PP      P +GG                        
Sbjct: 318 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNP 377

Query: 41  -GGTGVGGGDRDRDSGVVGARPRASP-PPQGPLPGPP 75
            G     GG+  +       +P+  P PPQG  P  P
Sbjct: 378 QGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 414


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 48/152 (31%), Positives = 53/152 (34%), Gaps = 29/152 (19%)

Query: 5   PKKKPPPPDAD---------------PANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGD 49
           P   PPPP A                 A  PP PGP  P PR      +           
Sbjct: 129 PTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAP---- 184

Query: 50  RDRDSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGP 109
                    A P A  PP GP   PP A+      +PP       PQQ  PPP      P
Sbjct: 185 ---------AAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPP 235

Query: 110 GGGPGDALGAAAAGVGAAGVVVGVGGAVGVGG 141
            GG   A G AA  V    VV  +GG+ G GG
Sbjct: 236 EGGAVRA-GGAARPVSLREVVRYLGGSGGAGG 266



 Score = 37.4 bits (85), Expect = 0.037
 Identities = 33/111 (29%), Positives = 36/111 (32%), Gaps = 16/111 (14%)

Query: 19  EPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP-PPQGPLPGPPGA 77
           +PP  G  PPAP R                 R   +    A P  +P PP  P P    A
Sbjct: 100 QPPRRGATPPAPPRA---------------PRGAPAAAAAAAPPPTPAPPPPPAPVAAAA 144

Query: 78  LHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAAAGVGAAG 128
             R   A    A A P P  A P P      P   P  A  A  A    AG
Sbjct: 145 PARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAG 195



 Score = 35.4 bits (80), Expect = 0.14
 Identities = 40/130 (30%), Positives = 48/130 (36%), Gaps = 43/130 (33%)

Query: 5   PKKKPPP------PDADPANEPPPPG----PMPPAPR---RGGGVGVGG----------- 40
           P++ PPP      P   P  +PP P     P PP P+    GG V  GG           
Sbjct: 196 PRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVV 255

Query: 41  ---GGTGVGGG--DRDRDSGVVGARPRASPPPQGPLPGPPGALHR---WALAVPPGAVAG 92
              GG+G  GG   R R  G++     A            G L R    ALA+P G   G
Sbjct: 256 RYLGGSGGAGGRLTRGRVQGLLEEEAAAR-----------GRLERTRLGALALPRGDRPG 304

Query: 93  PRPQQASPPP 102
             P  AS  P
Sbjct: 305 RAPPAASARP 314



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 20/61 (32%), Positives = 21/61 (34%)

Query: 62  RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAA 121
           R  PP +G  P  P    R A A    A   P P    PP       P   P  A  AA 
Sbjct: 98  RVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAAT 157

Query: 122 A 122
           A
Sbjct: 158 A 158


>gi|73486666 alpha 1 type IX collagen isoform 1 precursor [Homo
           sapiens]
          Length = 921

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 58/178 (32%), Positives = 68/178 (38%), Gaps = 22/178 (12%)

Query: 5   PKKKPPPPDADPANEPPPPGP--MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-- 60
           PK  P PP   PA EP  PG    P  P   G  G  G    +G   +  + GV G+R  
Sbjct: 297 PKGPPGPP--GPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGF 354

Query: 61  -PRASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDAL 117
             R  P P GP    G PG L R      PG    P P    P P G  G  G   GD L
Sbjct: 355 PGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGP----PGPPGPRGTIGFHDGDPL 410

Query: 118 GAAAAGVGAAGV--VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGA 173
              A   G +G   + G+ G  G  G    PG    + +    G +G       EVGA
Sbjct: 411 CPNACPPGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELG-------EVGA 461



 Score = 49.7 bits (117), Expect = 7e-06
 Identities = 56/185 (30%), Positives = 70/185 (37%), Gaps = 35/185 (18%)

Query: 22  PPGPMPPAPRRG--GGVGVGG-----GGTGVGGGD-RDRDSGVVGARPRASPP-PQGP-- 70
           PPG   P   RG  G  G+ G     G TG+ G D RD   G+ G +     P P G   
Sbjct: 509 PPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAG 568

Query: 71  ---LPGPPGALHRWALAVPPGAVAGP----------RPQQASPPPCGGPGGPGGGPGDAL 117
              LPG PG      +A   G+   P          +P Q  PP   GP GP G PG   
Sbjct: 569 LQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRG 628

Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGV----GAVGGGSPEREEVGA 173
                G       +G  G+ G+ G    PG        PG+    G VG   P+ E+  +
Sbjct: 629 ELGPVGSPGLPGKLGSLGSPGLPGLPGPPG-------LPGMKGDRGVVGEPGPKGEQGAS 681

Query: 174 GYNSE 178
           G   E
Sbjct: 682 GEEGE 686



 Score = 37.4 bits (85), Expect = 0.037
 Identities = 49/161 (30%), Positives = 54/161 (33%), Gaps = 33/161 (20%)

Query: 12  PDADPANEPPPPGPMPPAPRRGGGVGVGG---------GGTGVGGGDRDRDSGVVGARPR 62
           P  DP    PP  P PP PR   G   G          G +G  G    R  G  GA+  
Sbjct: 380 PVGDPGRRGPPGPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPGLPGMR--GHKGAKGE 437

Query: 63  ASPP----------PQGPL-----PGPPGA--LHRWALAVPPGAVAGPRPQQASPPPCGG 105
              P           QG L      GPPGA  L      V      G R     P P G 
Sbjct: 438 IGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGL 497

Query: 106 PGGPG-----GGPGDALGAAAAGVGAAGVVVGVGGAVGVGG 141
           PG PG     G PG+A      G   A  + G+ G  G  G
Sbjct: 498 PGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTG 538



 Score = 36.2 bits (82), Expect = 0.083
 Identities = 38/111 (34%), Positives = 41/111 (36%), Gaps = 24/111 (21%)

Query: 62  RASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDALGAAA 121
           R  P  QGP PGPPG         PPG                G  GP G PG    A  
Sbjct: 268 RGPPGEQGP-PGPPG---------PPGV--------PGIDGIDGDRGPKGPPGPPGPAGE 309

Query: 122 AGVGAAGVVVGVGGAVGVGGCCSGPGH--SKRRRQAPGV----GAVGGGSP 166
            G   A    G  GA G+ G    PG   SK ++  PGV    G  G G P
Sbjct: 310 PGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIP 360



 Score = 35.0 bits (79), Expect = 0.19
 Identities = 34/111 (30%), Positives = 38/111 (34%), Gaps = 8/111 (7%)

Query: 53  DSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGG 112
           DSG  G   R  PP  GP PGPPG         P        P    PP   G  GP G 
Sbjct: 785 DSGATGLPGRPGPP--GP-PGPPGEN-----GFPGQMGIRGLPGIKGPPGALGLRGPKGD 836

Query: 113 PGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG 163
            G+       G G  G+   +G     G    G       R  PGV  + G
Sbjct: 837 LGEKGERGPPGRGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAGIPG 887



 Score = 34.7 bits (78), Expect = 0.24
 Identities = 51/201 (25%), Positives = 65/201 (32%), Gaps = 49/201 (24%)

Query: 9   PPPP-------DADPANEPPPPGPMPPAPRRG--------GGVGVGGGGTGVGGGDRDRD 53
           P PP       D     EP P G    +   G        G +G+ G     G       
Sbjct: 654 PGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGL 713

Query: 54  SGVVGAR-------PRASPPPQGPLPGPPGALHRWALAVPPG------------------ 88
            G  G+R       PR  P P+G + G  GA     +  PPG                  
Sbjct: 714 RGPEGSRGLPGVEGPRGPPGPRG-VQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQE 772

Query: 89  -----AVAGPRPQQASP--PPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGG 141
                A +  RP   +   P   GP GP G PG+       G+     + G  GA+G+ G
Sbjct: 773 HFAEMAASLKRPDSGATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRG 832

Query: 142 CCSGPGHSKRRRQAPGVGAVG 162
              G    K  R  PG G  G
Sbjct: 833 -PKGDLGEKGERGPPGRGPNG 852



 Score = 33.1 bits (74), Expect = 0.71
 Identities = 41/137 (29%), Positives = 44/137 (32%), Gaps = 24/137 (17%)

Query: 12  PDADPANEPPPPGPM-PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGP 70
           PD+     P  PGP  PP P          G  G  G       G+ G      PP    
Sbjct: 784 PDSGATGLPGRPGPPGPPGPP---------GENGFPG-----QMGIRGLPGIKGPPGALG 829

Query: 71  LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG----GGPGDALGAAAAGVGA 126
           L GP G L       PPG     R     P   G PG PG    G  G        GV  
Sbjct: 830 LRGPKGDLGEKGERGPPG-----RGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAG 884

Query: 127 AGVVVGVGGAVGVGGCC 143
              V G  G  G+ G C
Sbjct: 885 IPGVPGPPGPPGLPGFC 901


>gi|73486664 alpha 1 type IX collagen isoform 2 precursor [Homo
           sapiens]
          Length = 678

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 58/178 (32%), Positives = 68/178 (38%), Gaps = 22/178 (12%)

Query: 5   PKKKPPPPDADPANEPPPPGP--MPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGAR-- 60
           PK  P PP   PA EP  PG    P  P   G  G  G    +G   +  + GV G+R  
Sbjct: 54  PKGPPGPP--GPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGF 111

Query: 61  -PRASPPPQGP--LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGPGDAL 117
             R  P P GP    G PG L R      PG    P P    P P G  G  G   GD L
Sbjct: 112 PGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGP----PGPPGPRGTIGFHDGDPL 167

Query: 118 GAAAAGVGAAGV--VVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGGGSPEREEVGA 173
              A   G +G   + G+ G  G  G    PG    + +    G +G       EVGA
Sbjct: 168 CPNACPPGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELG-------EVGA 218



 Score = 49.7 bits (117), Expect = 7e-06
 Identities = 56/185 (30%), Positives = 70/185 (37%), Gaps = 35/185 (18%)

Query: 22  PPGPMPPAPRRG--GGVGVGG-----GGTGVGGGD-RDRDSGVVGARPRASPP-PQGP-- 70
           PPG   P   RG  G  G+ G     G TG+ G D RD   G+ G +     P P G   
Sbjct: 266 PPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAG 325

Query: 71  ---LPGPPGALHRWALAVPPGAVAGP----------RPQQASPPPCGGPGGPGGGPGDAL 117
              LPG PG      +A   G+   P          +P Q  PP   GP GP G PG   
Sbjct: 326 LQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQGPPGEVGPRGPQGLPGSRG 385

Query: 118 GAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGV----GAVGGGSPEREEVGA 173
                G       +G  G+ G+ G    PG        PG+    G VG   P+ E+  +
Sbjct: 386 ELGPVGSPGLPGKLGSLGSPGLPGLPGPPG-------LPGMKGDRGVVGEPGPKGEQGAS 438

Query: 174 GYNSE 178
           G   E
Sbjct: 439 GEEGE 443



 Score = 38.1 bits (87), Expect = 0.022
 Identities = 43/130 (33%), Positives = 47/130 (36%), Gaps = 33/130 (25%)

Query: 52  RDSGVVG---------ARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPP 102
           RD G +G         A  R  P  QGP PGPPG         PPG              
Sbjct: 6   RDRGALGLLLLGLCLCAAQRGPPGEQGP-PGPPG---------PPGV--------PGIDG 47

Query: 103 CGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGH--SKRRRQAPGV-- 158
             G  GP G PG    A   G   A    G  GA G+ G    PG   SK ++  PGV  
Sbjct: 48  IDGDRGPKGPPGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPG 107

Query: 159 --GAVGGGSP 166
             G  G G P
Sbjct: 108 SRGFPGRGIP 117



 Score = 37.4 bits (85), Expect = 0.037
 Identities = 49/161 (30%), Positives = 54/161 (33%), Gaps = 33/161 (20%)

Query: 12  PDADPANEPPPPGPMPPAPRRGGGVGVGG---------GGTGVGGGDRDRDSGVVGARPR 62
           P  DP    PP  P PP PR   G   G          G +G  G    R  G  GA+  
Sbjct: 137 PVGDPGRRGPPGPPGPPGPRGTIGFHDGDPLCPNACPPGRSGYPGLPGMR--GHKGAKGE 194

Query: 63  ASPP----------PQGPL-----PGPPGA--LHRWALAVPPGAVAGPRPQQASPPPCGG 105
              P           QG L      GPPGA  L      V      G R     P P G 
Sbjct: 195 IGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGL 254

Query: 106 PGGPG-----GGPGDALGAAAAGVGAAGVVVGVGGAVGVGG 141
           PG PG     G PG+A      G   A  + G+ G  G  G
Sbjct: 255 PGAPGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTG 295



 Score = 35.0 bits (79), Expect = 0.19
 Identities = 34/111 (30%), Positives = 38/111 (34%), Gaps = 8/111 (7%)

Query: 53  DSGVVGARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGG 112
           DSG  G   R  PP  GP PGPPG         P        P    PP   G  GP G 
Sbjct: 542 DSGATGLPGRPGPP--GP-PGPPGEN-----GFPGQMGIRGLPGIKGPPGALGLRGPKGD 593

Query: 113 PGDALGAAAAGVGAAGVVVGVGGAVGVGGCCSGPGHSKRRRQAPGVGAVGG 163
            G+       G G  G+   +G     G    G       R  PGV  + G
Sbjct: 594 LGEKGERGPPGRGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAGIPG 644



 Score = 34.7 bits (78), Expect = 0.24
 Identities = 51/201 (25%), Positives = 65/201 (32%), Gaps = 49/201 (24%)

Query: 9   PPPP-------DADPANEPPPPGPMPPAPRRG--------GGVGVGGGGTGVGGGDRDRD 53
           P PP       D     EP P G    +   G        G +G+ G     G       
Sbjct: 411 PGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGL 470

Query: 54  SGVVGAR-------PRASPPPQGPLPGPPGALHRWALAVPPG------------------ 88
            G  G+R       PR  P P+G + G  GA     +  PPG                  
Sbjct: 471 RGPEGSRGLPGVEGPRGPPGPRG-VQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQE 529

Query: 89  -----AVAGPRPQQASP--PPCGGPGGPGGGPGDALGAAAAGVGAAGVVVGVGGAVGVGG 141
                A +  RP   +   P   GP GP G PG+       G+     + G  GA+G+ G
Sbjct: 530 HFAEMAASLKRPDSGATGLPGRPGPPGPPGPPGENGFPGQMGIRGLPGIKGPPGALGLRG 589

Query: 142 CCSGPGHSKRRRQAPGVGAVG 162
              G    K  R  PG G  G
Sbjct: 590 -PKGDLGEKGERGPPGRGPNG 609



 Score = 33.1 bits (74), Expect = 0.71
 Identities = 41/137 (29%), Positives = 44/137 (32%), Gaps = 24/137 (17%)

Query: 12  PDADPANEPPPPGPM-PPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPPQGP 70
           PD+     P  PGP  PP P          G  G  G       G+ G      PP    
Sbjct: 541 PDSGATGLPGRPGPPGPPGPP---------GENGFPG-----QMGIRGLPGIKGPPGALG 586

Query: 71  LPGPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPG----GGPGDALGAAAAGVGA 126
           L GP G L       PPG     R     P   G PG PG    G  G        GV  
Sbjct: 587 LRGPKGDLGEKGERGPPG-----RGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAG 641

Query: 127 AGVVVGVGGAVGVGGCC 143
              V G  G  G+ G C
Sbjct: 642 IPGVPGPPGPPGLPGFC 658


>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
           preproprotein [Homo sapiens]
          Length = 331

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 44/133 (33%), Positives = 49/133 (36%), Gaps = 17/133 (12%)

Query: 6   KKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASP 65
           K + PPP  D +  P  P   P  P   GG    G     G        G  G +P+  P
Sbjct: 137 KPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG--GKKPQGPP 194

Query: 66  PPQGPLPGPPGALHRWALAVPPGAVAGPRPQ-----QASPPPCGGPGGP---GGG----- 112
           PP  P   PP      +   PPG   GP PQ     Q  PPP G P GP   GG      
Sbjct: 195 PPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGP 254

Query: 113 --PGDALGAAAAG 123
             PG   G  A G
Sbjct: 255 PPPGKPQGPPAQG 267



 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 39/115 (33%), Positives = 44/115 (38%), Gaps = 19/115 (16%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTG-----VGGGDRDRDSGVVGA 59
           P+  PP     P   PPPPG     P +GG    G    G        GD+ R       
Sbjct: 97  PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPG 156

Query: 60  RPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQ----QASPPPCGGPGGP 109
           +P+  PP  G  P GPP          PPG   GP PQ       PPP G P GP
Sbjct: 157 KPQGPPPQGGNQPQGPP---------PPPGKPQGPPPQGGKKPQGPPPPGKPQGP 202



 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 38/111 (34%), Positives = 43/111 (38%), Gaps = 29/111 (26%)

Query: 9   PPPPDADPANEPP-----PPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRA 63
           PPPP   P   PP     P GP PP   +G              GD+ R       +P+ 
Sbjct: 50  PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ----------GDKSRSPRSPPGKPQG 99

Query: 64  SPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109
            PP  G  P GPP          PPG   GP PQ  +    PPP G P GP
Sbjct: 100 PPPQGGNQPQGPPP---------PPGKPQGPPPQGGNRPQGPPPPGKPQGP 141



 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 40/123 (32%), Positives = 47/123 (38%), Gaps = 31/123 (25%)

Query: 9   PPPPDADPANEPPPPG-PMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRASPPP 67
           PPP        PPPPG P  P P+                GD+ R S     +P+  PP 
Sbjct: 182 PPPQGGKKPQGPPPPGKPQGPPPQ----------------GDKSRSSQSPPGKPQGPPPQ 225

Query: 68  QGPLP-GPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGPGGGPGDALGAAAA 122
            G  P GPP          PPG   GP PQ  +    PPP G P GP    G    +A +
Sbjct: 226 GGNQPQGPP---------PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARS 276

Query: 123 GVG 125
             G
Sbjct: 277 PPG 279



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 37/116 (31%), Positives = 45/116 (38%), Gaps = 20/116 (17%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVG------GGGTGVGGGDRDRDSGVVG 58
           P+  PP     P   PPPPG     P +GG    G        G    GG + + +    
Sbjct: 219 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPP 278

Query: 59  ARPRASPPPQGPLP-GPPGALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGP 113
            +P+  P  +G  P GPP          PP   AG  PQQ   PP G P GP   P
Sbjct: 279 GKPQGPPQQEGNNPQGPP----------PP---AGGNPQQPQAPPAGQPQGPPRPP 321



 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 38/111 (34%), Positives = 46/111 (41%), Gaps = 8/111 (7%)

Query: 5   PKKKPPPPDADPANEPPPPGPMPPAPRRGGGVGVGGGGTGVGGGDRDRDSGVVGARPRAS 64
           P+  PP  D   +++ PP  P  P P+  GG    G     G        G  G +P+  
Sbjct: 199 PQGPPPQGDKSRSSQSPPGKPQGPPPQ--GGNQPQGPPPPPGKPQGPPPQG--GNKPQGP 254

Query: 65  PPPQGPLPGPP--GALHRWALAVPPGAVAGPRPQQASPPPCGGPGGPGGGP 113
           PPP  P  GPP  G     +   PPG   GP PQQ    P G P   GG P
Sbjct: 255 PPPGKP-QGPPAQGGSKSQSARSPPGKPQGP-PQQEGNNPQGPPPPAGGNP 303



 Score = 34.3 bits (77), Expect = 0.32
 Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 17/56 (30%)

Query: 58  GARPRASPPPQGPLPGPPGALHRWALAVPPGAVAGPRPQQAS----PPPCGGPGGP 109
           G  P+    PQGP P             PPG   GP PQ  +    PPP G P GP
Sbjct: 38  GPSPQGGNKPQGPPP-------------PPGKPQGPPPQGGNKPQGPPPPGKPQGP 80



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 26/97 (26%), Positives = 31/97 (31%), Gaps = 30/97 (30%)

Query: 9   PPPPDADPANEPP-----PPGPMPPA-----PRRGGGVGVGG------------------ 40
           PPPP   P   PP     P GP PP      P +GG                        
Sbjct: 233 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNP 292

Query: 41  -GGTGVGGGDRDRDSGVVGARPRASP-PPQGPLPGPP 75
            G     GG+  +       +P+  P PPQG  P  P
Sbjct: 293 QGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 329


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.132    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,040,330
Number of Sequences: 37866
Number of extensions: 2121820
Number of successful extensions: 38731
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 1527
Number of HSP's that attempted gapping in prelim test: 15803
Number of HSP's gapped (non-prelim): 13531
length of query: 571
length of database: 18,247,518
effective HSP length: 108
effective length of query: 463
effective length of database: 14,157,990
effective search space: 6555149370
effective search space used: 6555149370
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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