OTUD3 4841

Name: OTUD3	Sequence: fasta or formatted (398aa)		NCBI GI: 149192871
Description: OTU domain containing 3		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 37 2 C cysteine 1.3 5 1 D aspartate 4.8 19 2 E glutamate 10.8 43 3 F phenylalanine 3.0 12 1 G glycine 7.0 28 5 H histidine 3.3 13 1 I isoleucine 3.5 14 2 K lysine 7.0 28 3 L leucine 7.0 28 1 M methionine 1.5 6 1 N asparagine 8.0 32 2 P proline 2.8 11 1 Q glutamine 6.0 24 2 R arginine 9.3 37 2 S serine 5.8 23 2 T threonine 2.8 11 1 V valine 4.8 19 2 W tryptophan 0.8 3 1 Y tyrosine 1.3 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 OTU domain containing 3 OTUD6B 0.049 OTU domain containing 6B OTUD5 0.044 OTU domain containing 5 isoform b OTUD5 0.044 OTU domain containing 5 isoform b OTUD5 0.041 OTU domain containing 5 isoform a OTUD1 0.037 OTU domain containing 1 OTUD6A 0.036 OTU domain containing 6A OTUD5 0.035 OTU domain containing 5 isoform c RNF20 0.018 ring finger protein 20 DSP 0.017 desmoplakin isoform I FANCE 0.017 Fanconi anemia, complementation group E DSP 0.015 desmoplakin isoform II SRRT 0.015 arsenate resistance protein 2 isoform e SRRT 0.015 arsenate resistance protein 2 isoform d SRRT 0.015 arsenate resistance protein 2 isoform c SRRT 0.015 arsenate resistance protein 2 isoform a LOC100133599 0.014 PREDICTED: hypothetical protein LOC100133599 0.014 PREDICTED: hypothetical protein RG9MTD2 0.014 RNA (guanine-9-) methyltransferase domain containin... RG9MTD2 0.014 RNA (guanine-9-) methyltransferase domain containin... RG9MTD2 0.014 RNA (guanine-9-) methyltransferase domain containing... INCENP 0.014 inner centromere protein antigens 135/155kDa isofor... INCENP 0.014 inner centromere protein antigens 135/155kDa isofor... TBC1D10B 0.013 TBC1 domain family, member 10B RPGR 0.013 retinitis pigmentosa GTPase regulator isoform C [Hom... ZFHX3 0.013 AT-binding transcription factor 1 EIF5B 0.013 eukaryotic translation initiation factor 5B MINK1 0.012 misshapen/NIK-related kinase isoform 4 MINK1 0.012 misshapen/NIK-related kinase isoform 2 MINK1 0.012 misshapen/NIK-related kinase isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.