Search of human proteins with 33300666

Search of human proteins with 33300666

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33300666 hypothetical protein LOC84895 [Homo sapiens]
         (593 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33300666 hypothetical protein LOC84895 [Homo sapiens]             1163   0.0  
gi|38348384 hypothetical protein LOC374986 [Homo sapiens]             400   e-111
gi|119395764 NLR family, pyrin domain containing 3 isoform a [Ho...    35   0.15 
gi|188536116 NLR family, pyrin domain containing 3 isoform c [Ho...    35   0.15 
gi|34878693 NLR family, pyrin domain containing 3 isoform a [Hom...    35   0.15 
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]       35   0.19 
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         34   0.33 
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa...    34   0.33 
gi|146232000 checkpoint suppressor 1 isoform 1 [Homo sapiens]          34   0.43 
gi|51093865 checkpoint suppressor 1 isoform 2 [Homo sapiens]           34   0.43 
gi|60097902 filaggrin [Homo sapiens]                                   33   0.97 
gi|29893564 microspherule protein 1 isoform 1 [Homo sapiens]           33   0.97 
gi|59799166 microspherule protein 1 isoform 2 [Homo sapiens]           33   0.97 
gi|7705344 DNA-directed DNA polymerase kappa [Homo sapiens]            32   1.6  
gi|55953110 retinoblastoma protein-binding zinc finger protein i...    32   1.6  
gi|20336260 retinoblastoma protein-binding zinc finger protein i...    32   1.6  
gi|20336258 retinoblastoma protein-binding zinc finger protein i...    32   1.6  
gi|187829052 tumor protein p73 isoform d [Homo sapiens]                32   2.2  
gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo sa...    32   2.2  
gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo sa...    32   2.2  
gi|34452686 ring finger protein, LIM domain interacting [Homo sa...    31   2.8  
gi|34452684 ring finger protein, LIM domain interacting [Homo sa...    31   2.8  
gi|134142062 acetyl-Coenzyme A carboxylase beta [Homo sapiens]         31   2.8  
gi|5453726 leucine rich repeat (in FLII) interacting protein 2 i...    31   2.8  
gi|19111150 angiomotin isoform 2 [Homo sapiens]                        31   2.8  
gi|166064029 angiomotin isoform 1 [Homo sapiens]                       31   2.8  
gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens]           31   2.8  
gi|61966703 NHS-like 2 [Homo sapiens]                                  31   2.8  
gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens]    31   3.7  
gi|32307124 nuclear receptor coactivator 3 isoform b [Homo sapiens]    31   3.7  

>gi|33300666 hypothetical protein LOC84895 [Homo sapiens]
          Length = 593

 Score = 1163 bits (3008), Expect = 0.0
 Identities = 593/593 (100%), Positives = 593/593 (100%)

Query: 1   MAFRRAEGTSMIQALAMTVAEIPVFLYTTFGQSAFSQLRLTPGLRKVLFATALGTVALAL 60
           MAFRRAEGTSMIQALAMTVAEIPVFLYTTFGQSAFSQLRLTPGLRKVLFATALGTVALAL
Sbjct: 1   MAFRRAEGTSMIQALAMTVAEIPVFLYTTFGQSAFSQLRLTPGLRKVLFATALGTVALAL 60

Query: 61  AAHQLKRRRRRKKQVGPEMGGEQLGTVPLPILLARKVPSVKKGYSSRRVQSPSSKSNDTL 120
           AAHQLKRRRRRKKQVGPEMGGEQLGTVPLPILLARKVPSVKKGYSSRRVQSPSSKSNDTL
Sbjct: 61  AAHQLKRRRRRKKQVGPEMGGEQLGTVPLPILLARKVPSVKKGYSSRRVQSPSSKSNDTL 120

Query: 121 SGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLWDARGMEESLTTSDGNAESLYMQG 180
           SGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLWDARGMEESLTTSDGNAESLYMQG
Sbjct: 121 SGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLWDARGMEESLTTSDGNAESLYMQG 180

Query: 181 MELFEEALQKWEQALSVGQRGDSGSTPMPRDGLRNPETASEPLSEPESQRKEFAEKLESL 240
           MELFEEALQKWEQALSVGQRGDSGSTPMPRDGLRNPETASEPLSEPESQRKEFAEKLESL
Sbjct: 181 MELFEEALQKWEQALSVGQRGDSGSTPMPRDGLRNPETASEPLSEPESQRKEFAEKLESL 240

Query: 241 LHRAYHLQEEFGSTFPADSMLLDLERTLMLPLTEGSLRLRADDEDSLTSEDSFFSATELF 300
           LHRAYHLQEEFGSTFPADSMLLDLERTLMLPLTEGSLRLRADDEDSLTSEDSFFSATELF
Sbjct: 241 LHRAYHLQEEFGSTFPADSMLLDLERTLMLPLTEGSLRLRADDEDSLTSEDSFFSATELF 300

Query: 301 ESLQTGDYPIPLSRPAAAYEEALQLVKEGRVPCRTLRTELLGCYSDQDFLAKLHCVRQAF 360
           ESLQTGDYPIPLSRPAAAYEEALQLVKEGRVPCRTLRTELLGCYSDQDFLAKLHCVRQAF
Sbjct: 301 ESLQTGDYPIPLSRPAAAYEEALQLVKEGRVPCRTLRTELLGCYSDQDFLAKLHCVRQAF 360

Query: 361 EGLLEDKSNQLFFGKVGRQMVTGLMTKAEKSPKGFLESYEEMLSYALRPETWATTRLELE 420
           EGLLEDKSNQLFFGKVGRQMVTGLMTKAEKSPKGFLESYEEMLSYALRPETWATTRLELE
Sbjct: 361 EGLLEDKSNQLFFGKVGRQMVTGLMTKAEKSPKGFLESYEEMLSYALRPETWATTRLELE 420

Query: 421 GRGVVCMSFFDIVLDFILMDAFEDLENPPASVLAVLRNRWLSDSFKETALATACWSVLKA 480
           GRGVVCMSFFDIVLDFILMDAFEDLENPPASVLAVLRNRWLSDSFKETALATACWSVLKA
Sbjct: 421 GRGVVCMSFFDIVLDFILMDAFEDLENPPASVLAVLRNRWLSDSFKETALATACWSVLKA 480

Query: 481 KRRLLMVPDGFISHFYSVSEHVSPVLAFGFLGPKPQLAEVCAFFKHQIVQYLRDMFDLDN 540
           KRRLLMVPDGFISHFYSVSEHVSPVLAFGFLGPKPQLAEVCAFFKHQIVQYLRDMFDLDN
Sbjct: 481 KRRLLMVPDGFISHFYSVSEHVSPVLAFGFLGPKPQLAEVCAFFKHQIVQYLRDMFDLDN 540

Query: 541 VRYTSLPALADDILQLSRRRSEILLGYLGVPAASSAGVNGALPRENGPLGELQ 593
           VRYTSLPALADDILQLSRRRSEILLGYLGVPAASSAGVNGALPRENGPLGELQ
Sbjct: 541 VRYTSLPALADDILQLSRRRSEILLGYLGVPAASSAGVNGALPRENGPLGELQ 593


>gi|38348384 hypothetical protein LOC374986 [Homo sapiens]
          Length = 632

 Score =  400 bits (1027), Expect = e-111
 Identities = 233/592 (39%), Positives = 353/592 (59%), Gaps = 48/592 (8%)

Query: 6   AEGTSMIQALAMTVAEIPVFLYTTFGQSAFSQLRLTPGLRKVLFATALGTVALALAAHQL 65
           +E    ++  A+ V ++P+  Y +      SQ++ +P  +K+   TA+  +++   AH  
Sbjct: 39  SESQFSLKTAALRVFDLPLTWYYSL-----SQIKFSPVAKKLFVVTAVSAISVIFLAHHF 93

Query: 66  KRRRRRKKQVGPEMGGEQLGTVPLPILLARKVPSVKKGYSSRRVQSPSSKSNDTLSGISS 125
           KR+R +KK       G+ L   P  ++L       K+  S +     SS+ N TLS  S+
Sbjct: 94  KRKRGKKK-------GKILPWEPEHLIL----EYTKRAASDKGSSCSSSRQNLTLSLSST 142

Query: 126 IEP-------------SKHSGSSHSVASMMAVNSSSPTAAC--SGLWDARGMEE--SLTT 168
            +              SK+SGS+ S+AS+ +VNS   + AC  S  WD    ++   +  
Sbjct: 143 KDKGSQVCNYANGGLFSKYSGSAQSLASVQSVNSCH-SCACGNSNSWDKADEDDIKLVNI 201

Query: 169 SDGNAESLYMQGMELFEEALQKWEQALSVGQRGDS----GSTPMPRDGLRNPETASEPLS 224
                E+LY+ GMELFEEAL++WEQAL+   R       GS  +        E   + +S
Sbjct: 202 PVTTPENLYLMGMELFEEALRRWEQALTFRNRQAEDEACGSIKLGAGDAIAEENVDDIIS 261

Query: 225 EPESQRKEFAEKLESLLHRAYHLQEEFGSTFPA---DSMLLDLERTLMLPLTEGSLRLRA 281
                  EF  KLE+LL RAY LQEEF +T  A   +S+  D+++   + +         
Sbjct: 262 ------TEFIHKLEALLQRAYRLQEEFEATLGASDPNSLADDIDKDTDITMKGNVEDFGL 315

Query: 282 DDEDSLTSEDSFFSATELFESLQT-GDYPIPLSRPAAAYEEALQLVKEGRVPCRTLRTEL 340
            D  S+ S DSF SA EL E  +    Y +        YEEA+ LV+EG++  R LRTE+
Sbjct: 316 RDTLSIASTDSFASAAELAEHREVRHTYSLESLCHCPFYEEAMHLVEEGKIYSRVLRTEM 375

Query: 341 LGCYSDQDFLAKLHCVRQAFEGLLEDKSNQLFFGKVGRQMVTGLMTKAEKSPKGFLESYE 400
           L C  D DFLAKLHC+RQAF+ +L + +N++F  + GR++++ L+ KA K+PK F + ++
Sbjct: 376 LECLGDSDFLAKLHCIRQAFQVILSESANRIFLAESGRKILSALIVKARKNPKKFEDVFD 435

Query: 401 EMLSYALRPETWATTRLELEGRGVVCMSFFDIVLDFILMDAFEDLENPPASVLAVLRNRW 460
           EM+ +  + + W +T +EL  RGV  ++F+D+VLDFILMD+FEDLENPP S+  V+ NRW
Sbjct: 436 EMIYFLEQTDHWGSTEMELAARGVKNLNFYDVVLDFILMDSFEDLENPPTSIQNVVNNRW 495

Query: 461 LSDSFKETALATACWSVLKAKRRLLMVPDGFISHFYSVSEHVSPVLAFGFLGPKPQLAEV 520
           L+ SFKETA+A++CWSVLK KR+ + +PDGF +HFY++ EH+SPVLA+GFLGP+  L ++
Sbjct: 496 LNSSFKETAVASSCWSVLKQKRQQMKIPDGFFAHFYAICEHISPVLAWGFLGPRNSLYDL 555

Query: 521 CAFFKHQIVQYLRDMFDLDNVRYTSLPALADDILQLSRRRSEILLGYLGVPA 572
           C FFK+Q++ +L+D+FD + VRY+S   LA+D++QL  RR+E+L+ YL   A
Sbjct: 556 CCFFKNQVLLFLKDIFDFEKVRYSSTETLAEDLMQLLIRRTELLMAYLEADA 607


>gi|119395764 NLR family, pyrin domain containing 3 isoform a [Homo
           sapiens]
          Length = 1036

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 6/96 (6%)

Query: 96  KVPSVKKGY--SSRRVQSPSSKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSSSPTAAC 153
           +V S+  G+  +  + +    K    L  +  + PS    SSH+  S   VNS   ++ C
Sbjct: 675 RVESLSLGFLHNMPKEEEEEEKEGRHLDMVQCVLPS----SSHAACSHGLVNSHLTSSFC 730

Query: 154 SGLWDARGMEESLTTSDGNAESLYMQGMELFEEALQ 189
            GL+      +SLT  D +  SL   GM +  E LQ
Sbjct: 731 RGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQ 766


>gi|188536116 NLR family, pyrin domain containing 3 isoform c [Homo
           sapiens]
          Length = 979

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 6/96 (6%)

Query: 96  KVPSVKKGY--SSRRVQSPSSKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSSSPTAAC 153
           +V S+  G+  +  + +    K    L  +  + PS    SSH+  S   VNS   ++ C
Sbjct: 675 RVESLSLGFLHNMPKEEEEEEKEGRHLDMVQCVLPS----SSHAACSHGLVNSHLTSSFC 730

Query: 154 SGLWDARGMEESLTTSDGNAESLYMQGMELFEEALQ 189
            GL+      +SLT  D +  SL   GM +  E LQ
Sbjct: 731 RGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQ 766


>gi|34878693 NLR family, pyrin domain containing 3 isoform a [Homo
           sapiens]
          Length = 1036

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 6/96 (6%)

Query: 96  KVPSVKKGY--SSRRVQSPSSKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSSSPTAAC 153
           +V S+  G+  +  + +    K    L  +  + PS    SSH+  S   VNS   ++ C
Sbjct: 675 RVESLSLGFLHNMPKEEEEEEKEGRHLDMVQCVLPS----SSHAACSHGLVNSHLTSSFC 730

Query: 154 SGLWDARGMEESLTTSDGNAESLYMQGMELFEEALQ 189
            GL+      +SLT  D +  SL   GM +  E LQ
Sbjct: 731 RGLFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQ 766


>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
          Length = 4374

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 13/158 (8%)

Query: 72   KKQVGPEMGGEQLGTVPLPILLARKVPSVKKGYSSRRVQSPSSKSNDTLSGISSIEPSKH 131
            K+ +G     +Q  T+P P  L  +VP        + +QSP+ +   +   +  +EP + 
Sbjct: 2759 KETLGTLQSSQQQPTLPTPPALG-EVP--------QELQSPAGEGGSSTQLLMPVEPEEL 2809

Query: 132  SGSSHSVASMMAVNSSSPTAACSGLWDARGMEESLTTSDGNAESLYMQGMELFEEALQKW 191
              +  S  +       SP    + L   R  +    T    A S  ++G  +   +L   
Sbjct: 2810 GPTRPSGEAETTQMELSPAPTITSLSPERAEDSDALT----AVSSQLEGSPMDTSSLASC 2865

Query: 192  EQALSVGQRGDSGSTPMPRDGLRNPETASEPLSEPESQ 229
                +VG    +GS+  PR G   P  A   ++E + +
Sbjct: 2866 TLEEAVGDTSAAGSSEQPRAGSSTPGDAPPAVAEVQGR 2903


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 34/143 (23%), Positives = 55/143 (38%), Gaps = 2/143 (1%)

Query: 105  SSRRVQSPSSKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLWDARGMEE 164
            SS    S SS S+ + S  SS   S  S SS S +S  + +SSS +++ S    +   E+
Sbjct: 2617 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDED 2676

Query: 165  SLTTSDGNAESLYMQGMELFEEALQKWEQALSVGQRGDSGSTPMPRDGLRNPETASEPLS 224
            S  +SD  A      G     +A    +     G+   S  +P  +     P+      +
Sbjct: 2677 SSCSSDDEAAPAPTAGPS--AQAALPTKATKQAGKARPSAHSPGKKTPAPQPQAPPPQPT 2734

Query: 225  EPESQRKEFAEKLESLLHRAYHL 247
            +P   + +   K         HL
Sbjct: 2735 QPLQPKAQAGAKSRPKKREGVHL 2757



 Score = 33.5 bits (75), Expect = 0.57
 Identities = 21/70 (30%), Positives = 35/70 (50%)

Query: 105  SSRRVQSPSSKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLWDARGMEE 164
            +S R  SP+S S+ + S  SS   S  S SS S +S  + +SSS +++ S    +     
Sbjct: 2605 ASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2664

Query: 165  SLTTSDGNAE 174
            S ++S    +
Sbjct: 2665 SSSSSSSTTD 2674


>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
            sapiens]
          Length = 2881

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 62/285 (21%), Positives = 109/285 (38%), Gaps = 43/285 (15%)

Query: 98   PSVKKGYSSRRVQSPSSKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLW 157
            P+ KK    +R    SS S+      S    S  S SS S +   + +SSS +++CS   
Sbjct: 2116 PASKKPRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCS--- 2172

Query: 158  DARGMEESLTTSDGNAESLYMQGMELFEEALQKWEQALSVGQRGDSGSTPMPRDGLRNPE 217
             A     S T+S  ++ S   +  +  EE  QK E    +                   E
Sbjct: 2173 SASSSSSSSTSSSSSSSSSSSEESDSDEEEAQKRESTTHM---------------KAYDE 2217

Query: 218  TASEPLSEPESQRKEFAEKLESLLHRAYHLQEEF---GSTFPADSMLLDLERTLMLPLTE 274
             +   LS  + + ++  +        AY LQ  +    S +P D ++++   ++   + +
Sbjct: 2218 ESVASLSTTQDETQDSFQMNNGTPESAYILQGGYMLAASYWPKDRVMINRLDSICQTVLK 2277

Query: 275  GS--LRLRADDEDSLTSEDSFFSATELFES----LQTGDYPIPLSRPAAAYEE---ALQL 325
            G      R+ D +++ S    F  T+L +S     +  D  +P    A   EE   + Q+
Sbjct: 2278 GKWPSARRSYDANTVAS----FYTTKLLDSPGAATEYSDPSVPTPPGAGVKEEHDQSTQM 2333

Query: 326  VKEGRVPCRTLRTELL---------GCYSDQDFLAKLHCVRQAFE 361
             KEG +     +  L          G    Q +L +L  ++ A E
Sbjct: 2334 SKEGGLKLTFQKQGLAQKRPFDGEDGALGQQQYLTRLRELQSASE 2378


>gi|146232000 checkpoint suppressor 1 isoform 1 [Homo sapiens]
          Length = 490

 Score = 33.9 bits (76), Expect = 0.43
 Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 23/179 (12%)

Query: 85  GTVPLPILLARKVPSVKKGYSSRRVQSPSSKS--NDTLSGISSIEPSKHSGSSHSVASMM 142
           G  PLPI       +++ G +S R+++ S  S  +  +SG    + +  S  S +  S  
Sbjct: 290 GVRPLPITPIGVTAAMRNGITSCRMRTESEPSCGSPVVSGDPKEDHNYSSAKSSNARSTS 349

Query: 143 ----AVNSSSPTAACSGLWDARGMEESLTTSDGNAESLYMQGMELFEEALQKWEQALSVG 198
               +++SSS +A     +  +G +E    S+G+  S   +     EE  +K  Q     
Sbjct: 350 PTSDSISSSSSSADDHYEFATKGSQEGSEGSEGSFRS--HESPSDTEEDDRKHSQKEPKD 407

Query: 199 QRGDSG-------------STPMPRDGLRNPETASEPLSEPESQRKEFAEKLESLLHRA 244
             GDSG             +  +P D L   +  +E    PES  +E  E   SLLH A
Sbjct: 408 SLGDSGYASQHKKRQHFAKARKVPSDTLPLKKRRTE--KPPESDDEEMKEAAGSLLHLA 464


>gi|51093865 checkpoint suppressor 1 isoform 2 [Homo sapiens]
          Length = 468

 Score = 33.9 bits (76), Expect = 0.43
 Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 23/179 (12%)

Query: 85  GTVPLPILLARKVPSVKKGYSSRRVQSPSSKS--NDTLSGISSIEPSKHSGSSHSVASMM 142
           G  PLPI       +++ G +S R+++ S  S  +  +SG    + +  S  S +  S  
Sbjct: 268 GVRPLPITPIGVTAAMRNGITSCRMRTESEPSCGSPVVSGDPKEDHNYSSAKSSNARSTS 327

Query: 143 ----AVNSSSPTAACSGLWDARGMEESLTTSDGNAESLYMQGMELFEEALQKWEQALSVG 198
               +++SSS +A     +  +G +E    S+G+  S   +     EE  +K  Q     
Sbjct: 328 PTSDSISSSSSSADDHYEFATKGSQEGSEGSEGSFRS--HESPSDTEEDDRKHSQKEPKD 385

Query: 199 QRGDSG-------------STPMPRDGLRNPETASEPLSEPESQRKEFAEKLESLLHRA 244
             GDSG             +  +P D L   +  +E    PES  +E  E   SLLH A
Sbjct: 386 SLGDSGYASQHKKRQHFAKARKVPSDTLPLKKRRTE--KPPESDDEEMKEAAGSLLHLA 442


>gi|60097902 filaggrin [Homo sapiens]
          Length = 4061

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 36/142 (25%), Positives = 54/142 (38%), Gaps = 17/142 (11%)

Query: 114  SKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLWDARGMEESLTTSDGNA 173
            S S +T +   S + S+HSGS H  AS  A    S   + SG  ++ G   S       +
Sbjct: 3808 SASRETRNEEQSGDGSRHSGSRHHEASTQA---DSSRHSQSGQGESAGSRRSRRQGSSVS 3864

Query: 174  ESLYMQGMELFEEALQKWEQALSVGQRGDSGSTPMPRDGLRNPETA---------SEPLS 224
            +       E + E  ++  ++ S    G   S    RDG R+P ++         S P+ 
Sbjct: 3865 QD---SDSEAYPEDSERRSESASRNHHG--SSREQSRDGSRHPGSSHRDTASHVQSSPVQ 3919

Query: 225  EPESQRKEFAEKLESLLHRAYH 246
               S  KE           AYH
Sbjct: 3920 SDSSTAKEHGHFSSLSQDSAYH 3941



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 32/117 (27%), Positives = 46/117 (39%), Gaps = 8/117 (6%)

Query: 105  SSRRVQSPSSKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLWDARGMEE 164
            +SR      S S  T +   S + S+HS S H  AS  A    S   + SG   + G   
Sbjct: 3475 ASRGQSGSRSASRQTRNDEQSGDGSRHSWSHHHEASTQA---DSSRHSQSGQGQSAGPRT 3531

Query: 165  SLTTSDGNAESLYMQGMELFEEALQKWEQALSVGQRGDSGSTPMPRDGLRNPETASE 221
            S       ++    QG     E  ++W  + S   RG   +    RDG R+P +  E
Sbjct: 3532 SRNQGSSVSQDSDSQG---HSEDSERWSGSASRNHRG--SAQEQSRDGSRHPTSHHE 3583



 Score = 31.6 bits (70), Expect = 2.2
 Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 10/118 (8%)

Query: 105 SSRRVQSPSSKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLWDARGMEE 164
           +SR      S S  T +   S + S+HSGS H  AS  A  S    A        +G  E
Sbjct: 882 ASRGQSGSRSASRTTRNEEQSRDGSRHSGSRHHEASSHADISRHSQA-------GQGQSE 934

Query: 165 SLTTSDGNAESLYMQG-MELFEEALQKWEQALSVGQRGDSGSTPMPRDGLRNPETASE 221
              TS     S+      E   E  ++W  + S   RG   +    R G R+P +  E
Sbjct: 935 GSRTSRRQGSSVSQDSDSEGHSEDSERWSGSASRNHRG--SAQEQSRHGSRHPRSHHE 990



 Score = 31.2 bits (69), Expect = 2.8
 Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 13/119 (10%)

Query: 103  GYSSRRVQSPSSKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLWDARGM 162
            G+S  R  S  ++ ND  SG    + S+HSGS H  AS  A +S        G   + G 
Sbjct: 2506 GHSGSRSASRQTR-NDEQSG----DGSRHSGSRHHEASSRADSSGHSQV---GQGQSEGP 2557

Query: 163  EESLTTSDGNAESLYMQGMELFEEALQKWEQALSVGQRGDSGSTPMPRDGLRNPETASE 221
              S       ++    QG     E  ++W  + S    G   +    RDG R+P +  E
Sbjct: 2558 RTSRNWGSSFSQDSDSQG---HSEDSERWSGSASRNHHG--SAQEQLRDGSRHPRSHQE 2611



 Score = 30.8 bits (68), Expect = 3.7
 Identities = 44/174 (25%), Positives = 67/174 (38%), Gaps = 14/174 (8%)

Query: 125  SIEPSKHSGSSHSVASMMAVNSSS--PTAACSGLWDARGMEESLTTSDGNAESLYMQGME 182
            S++ S HSGS HS  +    + +S   + + S   + R  E+S    DG+  S    G  
Sbjct: 3777 SVDRSGHSGSHHSHTTSQGRSDASHGQSGSRSASRETRNEEQS---GDGSRHS----GSR 3829

Query: 183  LFEEALQKWEQALSVGQRGDS-GSTPMPRDGLR-NPETASEPLSEPESQRKEFAEKLESL 240
              E + Q      S   +G+S GS    R G   + ++ SE   E   +R E A +    
Sbjct: 3830 HHEASTQADSSRHSQSGQGESAGSRRSRRQGSSVSQDSDSEAYPEDSERRSESASRNH-- 3887

Query: 241  LHRAYHLQEEFGSTFPADSMLLDLERTLMLPLTEGSLRLRADDEDSLTSEDSFF 294
             H +   Q   GS  P  S           P+   S   +     S  S+DS +
Sbjct: 3888 -HGSSREQSRDGSRHPGSSHRDTASHVQSSPVQSDSSTAKEHGHFSSLSQDSAY 3940



 Score = 30.0 bits (66), Expect = 6.3
 Identities = 26/101 (25%), Positives = 37/101 (36%), Gaps = 8/101 (7%)

Query: 112  PSSKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLWDARGMEESLTTSDG 171
            P S   D      S + S+ SG+ H+ +S     +SS   A S   +  G    L ++D 
Sbjct: 1957 PGSHHEDRAGHGHSADSSRQSGTRHTESSSRGQAASSHEQARSSAGERHGSHHQLQSADS 2016

Query: 172  NAESLYMQGMELFEEALQKWEQALSVGQRGDSGSTPMPRDG 212
            +  S    G        Q        G RG SGS     +G
Sbjct: 2017 SRHSGIGHG--------QASSAVRDSGHRGYSGSQASDSEG 2049


>gi|29893564 microspherule protein 1 isoform 1 [Homo sapiens]
          Length = 462

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 3/92 (3%)

Query: 60  LAAHQLKRRRRRKKQVGPEMGGEQ-LGTVPLPILLARKVPSVKKGYSSRRVQSPSSKSND 118
           +A+    R    +   G +    Q LGT+P     +R +   +K +    V+S  +KS+ 
Sbjct: 14  MASGTASRSEDEESLAGQKRASSQALGTIPKRRSSSRFIK--RKKFDDELVESSLAKSST 71

Query: 119 TLSGISSIEPSKHSGSSHSVASMMAVNSSSPT 150
              G S +EP + SGS  S +    V+ +  T
Sbjct: 72  RAKGASGVEPGRCSGSEPSSSEKKKVSKAPST 103


>gi|59799166 microspherule protein 1 isoform 2 [Homo sapiens]
          Length = 475

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 3/92 (3%)

Query: 60  LAAHQLKRRRRRKKQVGPEMGGEQ-LGTVPLPILLARKVPSVKKGYSSRRVQSPSSKSND 118
           +A+    R    +   G +    Q LGT+P     +R +   +K +    V+S  +KS+ 
Sbjct: 27  MASGTASRSEDEESLAGQKRASSQALGTIPKRRSSSRFIK--RKKFDDELVESSLAKSST 84

Query: 119 TLSGISSIEPSKHSGSSHSVASMMAVNSSSPT 150
              G S +EP + SGS  S +    V+ +  T
Sbjct: 85  RAKGASGVEPGRCSGSEPSSSEKKKVSKAPST 116


>gi|7705344 DNA-directed DNA polymerase kappa [Homo sapiens]
          Length = 870

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 15/132 (11%)

Query: 183 LFEEALQKWEQALSVGQRGDSGSTPMPRDGLRNPETASEPLSEPESQRKEFAEKLESLLH 242
           LF E    +   +S+G     GST + RDG R   +     SE     ++++   E    
Sbjct: 386 LFSETSWHYFLHISLGL----GSTHLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSE 441

Query: 243 RAYHLQEEFGSTFPADSMLLDLERTLMLPLTEGSLRLRADDEDSL--TSEDSFFSATELF 300
            A  LQ+E          L     T+ L      ++ RA    S+  T+E+ F  A EL 
Sbjct: 442 LAQDLQKE---------RLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELL 492

Query: 301 ESLQTGDYPIPL 312
           ++    D+P PL
Sbjct: 493 KTEIDADFPHPL 504


>gi|55953110 retinoblastoma protein-binding zinc finger protein
           isoform c [Homo sapiens]
          Length = 1481

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 4/111 (3%)

Query: 88  PLPILLARKVPSVKKGYSSRRVQSPSSKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSS 147
           PLPIL     PS         + S +S    TLS  SS   S  S SS S +S  +  S 
Sbjct: 818 PLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSS---SSSSSSSFSSSSSSSSPSP 874

Query: 148 SPTAACSGLWDA-RGMEESLTTSDGNAESLYMQGMELFEEALQKWEQALSV 197
            P +A S +  +   +E SL       E L  +G++  EE     EQ + V
Sbjct: 875 PPLSAISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVV 925


>gi|20336260 retinoblastoma protein-binding zinc finger protein
            isoform b [Homo sapiens]
          Length = 1682

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 4/111 (3%)

Query: 88   PLPILLARKVPSVKKGYSSRRVQSPSSKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSS 147
            PLPIL     PS         + S +S    TLS  SS   S  S SS S +S  +  S 
Sbjct: 1019 PLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSS---SSSSSSSFSSSSSSSSPSP 1075

Query: 148  SPTAACSGLWDA-RGMEESLTTSDGNAESLYMQGMELFEEALQKWEQALSV 197
             P +A S +  +   +E SL       E L  +G++  EE     EQ + V
Sbjct: 1076 PPLSAISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVV 1126


>gi|20336258 retinoblastoma protein-binding zinc finger protein
            isoform a [Homo sapiens]
          Length = 1718

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 4/111 (3%)

Query: 88   PLPILLARKVPSVKKGYSSRRVQSPSSKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSS 147
            PLPIL     PS         + S +S    TLS  SS   S  S SS S +S  +  S 
Sbjct: 1019 PLPILSPTVSPSPSPIPPVEPLMSAASPGPPTLSSSSS---SSSSSSSFSSSSSSSSPSP 1075

Query: 148  SPTAACSGLWDA-RGMEESLTTSDGNAESLYMQGMELFEEALQKWEQALSV 197
             P +A S +  +   +E SL       E L  +G++  EE     EQ + V
Sbjct: 1076 PPLSAISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQDVVV 1126


>gi|187829052 tumor protein p73 isoform d [Homo sapiens]
          Length = 426

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 6/75 (8%)

Query: 177 YMQGMELFE----EALQKWEQALSVGQRGDSGSTPMPRDGLRNPETASEPLSEPESQRKE 232
           Y Q  +L +    +A Q W ++ S  QR D      P  GL  P  ++ PL      R+ 
Sbjct: 340 YRQQQQLLQRPPRDAQQPWPRSAS--QRRDEQQPQRPVHGLGVPLHSATPLPRRPQPRQF 397

Query: 233 FAEKLESLLHRAYHL 247
           F     S LHR +HL
Sbjct: 398 FNRIGVSKLHRVFHL 412


>gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo
            sapiens]
          Length = 1782

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 44/225 (19%), Positives = 89/225 (39%), Gaps = 26/225 (11%)

Query: 114  SKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLWDARGMEESLTTSDGNA 173
            S++  T   +++ E +   G+     +  A  ++   +A S L D+       TT +   
Sbjct: 967  SEAELTPEAVTAAETAGPLGAEEGTEASAAEETTEMVSAVSQLTDSPD-----TTEEATP 1021

Query: 174  ESLYMQGMELFEEALQKWEQALSVGQRGDSGSTPMPRDGLRNPETASEPLSEPESQRKEF 233
                  G+   EE  ++ ++ L          + +P  G   PE   +P+   E++R E 
Sbjct: 1022 VQEVEGGVPDIEEQERRTQEVLQAVAEKVKEESQLPGTG--GPEDVLQPVQRAEAERPE- 1078

Query: 234  AEKLESLLHRAYHLQEEFGSTFPADSMLLDLERTLMLPLTEGSLRLRADDEDSLTSEDSF 293
             E+ E     A  L++E       D+     E     P T+G +          T+ +SF
Sbjct: 1079 -EQAE-----ASGLKKETDVVLKVDAQEAKTE-----PFTQGKVV-------GQTTPESF 1120

Query: 294  FSATELFESLQTGDYPIPLSRPAAAYEEALQLVKEGRVPCRTLRT 338
              A ++ ES+++ +          A  ++ ++V E  +P  ++ T
Sbjct: 1121 EKAPQVTESIESSELVTTCQAETLAGVKSQEMVMEQAIPPDSVET 1165


>gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo
            sapiens]
          Length = 1684

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 44/225 (19%), Positives = 89/225 (39%), Gaps = 26/225 (11%)

Query: 114  SKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLWDARGMEESLTTSDGNA 173
            S++  T   +++ E +   G+     +  A  ++   +A S L D+       TT +   
Sbjct: 869  SEAELTPEAVTAAETAGPLGAEEGTEASAAEETTEMVSAVSQLTDSPD-----TTEEATP 923

Query: 174  ESLYMQGMELFEEALQKWEQALSVGQRGDSGSTPMPRDGLRNPETASEPLSEPESQRKEF 233
                  G+   EE  ++ ++ L          + +P  G   PE   +P+   E++R E 
Sbjct: 924  VQEVEGGVPDIEEQERRTQEVLQAVAEKVKEESQLPGTG--GPEDVLQPVQRAEAERPE- 980

Query: 234  AEKLESLLHRAYHLQEEFGSTFPADSMLLDLERTLMLPLTEGSLRLRADDEDSLTSEDSF 293
             E+ E     A  L++E       D+     E     P T+G +          T+ +SF
Sbjct: 981  -EQAE-----ASGLKKETDVVLKVDAQEAKTE-----PFTQGKVV-------GQTTPESF 1022

Query: 294  FSATELFESLQTGDYPIPLSRPAAAYEEALQLVKEGRVPCRTLRT 338
              A ++ ES+++ +          A  ++ ++V E  +P  ++ T
Sbjct: 1023 EKAPQVTESIESSELVTTCQAETLAGVKSQEMVMEQAIPPDSVET 1067


>gi|34452686 ring finger protein, LIM domain interacting [Homo
           sapiens]
          Length = 624

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 7/66 (10%)

Query: 105 SSRRVQSPSSKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLWDARGMEE 164
           S+R ++   S+S    SG  S   S  S SS S +S  + +SSSP+++  G       E 
Sbjct: 433 SNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSSPSSSSGG-------ES 485

Query: 165 SLTTSD 170
           S T+SD
Sbjct: 486 SETSSD 491


>gi|34452684 ring finger protein, LIM domain interacting [Homo
           sapiens]
          Length = 624

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 7/66 (10%)

Query: 105 SSRRVQSPSSKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLWDARGMEE 164
           S+R ++   S+S    SG  S   S  S SS S +S  + +SSSP+++  G       E 
Sbjct: 433 SNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSSPSSSSGG-------ES 485

Query: 165 SLTTSD 170
           S T+SD
Sbjct: 486 SETSSD 491


>gi|134142062 acetyl-Coenzyme A carboxylase beta [Homo sapiens]
          Length = 2458

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 36/134 (26%), Positives = 51/134 (38%), Gaps = 20/134 (14%)

Query: 214 RNPETASEPLSEPESQRKEF------AEKLESLLHRAYHLQEEFGSTFPADSMLLDLERT 267
           RNP ++S+    PE Q          A     L   A    ++ GS    D    +++R 
Sbjct: 101 RNPLSSSDAAPSPELQANGTGTQGLEATDTNGLSSSARPQGQQAGSPSKEDKKQANIKRQ 160

Query: 268 LMLPLTEGSLRLRADDEDSLTSED---------SFFSATELFESLQTGDYP--IPLSRPA 316
           LM     GS    + DEDS+             +   A  L   L TG+    +P  RP+
Sbjct: 161 LMTNFILGSFDDYSSDEDSVAGSSRESTRKGSRASLGALSLEAYLTTGEAETRVPTMRPS 220

Query: 317 AAYEEALQLVKEGR 330
            +    L LVK GR
Sbjct: 221 MS---GLHLVKRGR 231


>gi|5453726 leucine rich repeat (in FLII) interacting protein 2
           isoform 1 [Homo sapiens]
          Length = 721

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 18/152 (11%)

Query: 105 SSRRVQSPSSKSNDTLSGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLWDARGMEE 164
           S+RR    S   + ++  +SS++       + +     + NS+S T   SG    RG  +
Sbjct: 271 SNRRGSVVSEVDDISIPDLSSLDEKSDKQYAENYTRPSSRNSASATTPLSGNSSRRGSGD 330

Query: 165 SLTTSD------------------GNAESLYMQGMELFEEALQKWEQALSVGQRGDSGST 206
           + +  D                   + E  YMQG++  +E+L + E+        ++   
Sbjct: 331 TSSLIDPDTSLSELRDIYDLKDQIQDVEGRYMQGLKELKESLSEVEEKYKKAMVSNAQLD 390

Query: 207 PMPRDGLRNPETASEPLSEPESQRKEFAEKLE 238
               + +   +T  + + E E Q  EF  + E
Sbjct: 391 NEKNNLIYQVDTLKDVIEEQEEQMAEFYRENE 422


>gi|19111150 angiomotin isoform 2 [Homo sapiens]
          Length = 675

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 5/79 (6%)

Query: 309 PIPLSRPAAAYEEALQLVKEGRVPCRTLRTELLGCYSDQDFLAKLHC----VRQAFEGLL 364
           P+P   P A    A Q+V+      R LR EL GCY     L K+      V +A+E L+
Sbjct: 13  PVPAD-PFAIVSRAQQMVEILSDENRNLRQELEGCYEKVARLQKVETEIQRVSEAYENLV 71

Query: 365 EDKSNQLFFGKVGRQMVTG 383
           +  S +    K  R  + G
Sbjct: 72  KSSSKREALEKAMRNKLEG 90


>gi|166064029 angiomotin isoform 1 [Homo sapiens]
          Length = 1084

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 5/79 (6%)

Query: 309 PIPLSRPAAAYEEALQLVKEGRVPCRTLRTELLGCYSDQDFLAKLHC----VRQAFEGLL 364
           P+P   P A    A Q+V+      R LR EL GCY     L K+      V +A+E L+
Sbjct: 422 PVPAD-PFAIVSRAQQMVEILSDENRNLRQELEGCYEKVARLQKVETEIQRVSEAYENLV 480

Query: 365 EDKSNQLFFGKVGRQMVTG 383
           +  S +    K  R  + G
Sbjct: 481 KSSSKREALEKAMRNKLEG 499


>gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens]
          Length = 1257

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 60/288 (20%), Positives = 110/288 (38%), Gaps = 28/288 (9%)

Query: 55  TVALALAAHQLKRRRRRKKQVGPEMGGEQLGTVPLPILLARKVPSVKKGYSSRRVQSPSS 114
           T  L     QL  +     ++  E    +L    L  L++R   S++     R+ QSPS 
Sbjct: 107 TKELNACREQLLEKEEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPSG 166

Query: 115 KSNDT--LSGISSIEPSKHSGSSHSVASMMAVNSSSPTAACSGLWDARG----------- 161
            S++   L  + S+    H      V   + V+    +A    L  A             
Sbjct: 167 VSSEVEVLKALKSLF-EHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVH 225

Query: 162 MEESLTTSDGNAESLYMQGMELFEEALQKWEQALSVGQRGDSGSTPMPRDGLRNPETASE 221
           ++  + +S+G+ ES +++GME  ++     E+ LS G    +  T    +         E
Sbjct: 226 IQRKMASSEGSTESEHLEGMEPGQKV---HEKRLSNGSIDSTDETSQIVE-------LQE 275

Query: 222 PLSEPESQRKEFAEKLESLLHRAYHLQEEFGSTFPADSMLLDLERTLMLPLTEGSLRLRA 281
            L +   +  +  E+L +L  R   +++E   T   D +  +   T        ++  + 
Sbjct: 276 LLEKQNYEMAQMKERLAALSSRVGEVEQE-AETARKDLIKTEEMNTKYQRDIREAMAQKE 334

Query: 282 DDEDSLTS-EDSFFSATELFESLQTGDYPIPLSRPAAAYEEALQLVKE 328
           D E+ +T+ E  + SA    ES    D    L    A  E  L+ ++E
Sbjct: 335 DMEERITTLEKRYLSAQR--ESTSIHDMNDKLENELANKEAILRQMEE 380


>gi|61966703 NHS-like 2 [Homo sapiens]
          Length = 709

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 12/70 (17%)

Query: 203 SGSTPMPRDGLRNPETASEPLSE------------PESQRKEFAEKLESLLHRAYHLQEE 250
           S S   P D + +PE A EP +E            P +++   A +  SL+H+   + EE
Sbjct: 469 SVSKSEPEDDIESPEYAEEPRAEEVFTLPERKTKPPVAEKPPVARRPPSLVHKPPSVPEE 528

Query: 251 FGSTFPADSM 260
           +  T P  +M
Sbjct: 529 YALTSPTLAM 538


>gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens]
          Length = 1424

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 4/72 (5%)

Query: 105 SSRRVQSPSSKSNDTLSGISSIEPSKHS--GSSHSVASMMAVNSSSPTAACSGLWDARGM 162
           SS  V SPS  S+ T  G+SS      S     H +   +  N +SP        +A G 
Sbjct: 649 SSVSVTSPSGVSSSTSGGVSSTSNMHGSLLQEKHRILHKLLQNGNSPAEVAKITAEATGK 708

Query: 163 EESLTTS--DGN 172
           + S  TS  DGN
Sbjct: 709 DTSSITSCGDGN 720


>gi|32307124 nuclear receptor coactivator 3 isoform b [Homo sapiens]
          Length = 1420

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 4/72 (5%)

Query: 105 SSRRVQSPSSKSNDTLSGISSIEPSKHS--GSSHSVASMMAVNSSSPTAACSGLWDARGM 162
           SS  V SPS  S+ T  G+SS      S     H +   +  N +SP        +A G 
Sbjct: 649 SSVSVTSPSGVSSSTSGGVSSTSNMHGSLLQEKHRILHKLLQNGNSPAEVAKITAEATGK 708

Query: 163 EESLTTS--DGN 172
           + S  TS  DGN
Sbjct: 709 DTSSITSCGDGN 720


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.132    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,053,576
Number of Sequences: 37866
Number of extensions: 990262
Number of successful extensions: 3606
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 3536
Number of HSP's gapped (non-prelim): 102
length of query: 593
length of database: 18,247,518
effective HSP length: 108
effective length of query: 485
effective length of database: 14,157,990
effective search space: 6866625150
effective search space used: 6866625150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.