Guide to the Human Genome
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Name: MCRS1 Sequence: fasta or formatted (475aa) NCBI GI: 59799166
Description:

microspherule protein 1 isoform 2

Referenced in:

Additional Brain Proteins
Nucleus and Nucleolus

Other entries for this name:
alt prot [462aa] microspherule protein 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         38           2
 C cysteine            0.8          4           1
 D aspartate           6.3         30           2
 E glutamate           5.7         27           2
 F phenylalanine       2.7         13           2
 G glycine             5.7         27           2
 H histidine           1.5          7           1
 I isoleucine          4.4         21           1
 K lysine              7.6         36           3
 L leucine            11.4         54           3
 M methionine          1.9          9           1
 N asparagine          2.3         11           2
 P proline             5.1         24           2
 Q glutamine           6.1         29           1
 R arginine            7.8         37           2
 S serine              9.9         47           3
 T threonine           4.6         22           1
 V valine              5.5         26           2
 W tryptophan          1.3          6           1
 Y tyrosine            1.5          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   microspherule protein 1 isoform 2 
MCRS1                 0.964   microspherule protein 1 isoform 1 
CDKN2AIP              0.019   CDKN2A interacting protein 
SRRM2                 0.017   splicing coactivator subunit SRm300 
MUC12                 0.015   PREDICTED: mucin 12 
MUC12                 0.014   PREDICTED: mucin 12, cell surface associated 
LOC402360             0.014   PREDICTED: similar to hCG1742476 
LOC402360             0.014   PREDICTED: similar to hCG1742476 
LOC402360             0.014   PREDICTED: hypothetical protein LOC402360 
LOC100130716          0.013   PREDICTED: similar to mucin 11 
LOC100130716          0.013   PREDICTED: similar to Mucin-12 
TNRC18                0.013   trinucleotide repeat containing 18 
WAC                   0.013   WW domain-containing adapter with a coiled-coil regi...
MED1                  0.013   mediator complex subunit 1 
LOC100293608          0.012   PREDICTED: similar to HSPC088 
NOLC1                 0.012   nucleolar and coiled-body phosphoprotein 1 
SFRS4                 0.011   splicing factor, arginine/serine-rich 4 
LOC100288496          0.011   PREDICTED: hypothetical protein XP_002342747 
ATRX                  0.011   transcriptional regulator ATRX isoform 2 
ATRX                  0.011   transcriptional regulator ATRX isoform 1 
SCAF1                 0.011   SR-related CTD-associated factor 1 
IL16                  0.011   interleukin 16 isoform 2 
PALM                  0.011   paralemmin isoform 1 
PHOX2A                0.011   paired-like homeobox 2a 
FOXK1                 0.011   forkhead box K1 
TUB                   0.011   tubby isoform b 
TUB                   0.011   tubby isoform a 
RAPH1                 0.011   Ras association and pleckstrin homology domains 1 is...
BCL11B                0.010   B-cell CLL/lymphoma 11B isoform 1 
BCL11B                0.010   B-cell CLL/lymphoma 11B isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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