Guide to the Human Genome
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Name: FAM73B Sequence: fasta or formatted (593aa) NCBI GI: 33300666
Description:

hypothetical protein LOC84895

Referenced in:

Additional Conserved Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         52           3
 C cysteine            1.2          7           1
 D aspartate           4.4         26           2
 E glutamate           8.1         48           2
 F phenylalanine       4.9         29           2
 G glycine             6.7         40           2
 H histidine           1.5          9           1
 I isoleucine          2.0         12           1
 K lysine              4.0         24           2
 L leucine            13.5         80           2
 M methionine          3.2         19           2
 N asparagine          1.7         10           1
 P proline             5.4         32           2
 Q glutamine           4.0         24           1
 R arginine            6.7         40           5
 S serine             10.3         61           3
 T threonine           5.1         30           2
 V valine              5.4         32           2
 W tryptophan          0.8          5           1
 Y tyrosine            2.2         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC84895 
FAM73A                0.330   hypothetical protein LOC374986 
NLRP3                 0.009   NLR family, pyrin domain containing 3 isoform a [Ho...
NLRP3                 0.009   NLR family, pyrin domain containing 3 isoform c [Ho...
NLRP3                 0.009   NLR family, pyrin domain containing 3 isoform a [Hom...
HUWE1                 0.009   HECT, UBA and WWE domain containing 1 
TNRC18                0.008   trinucleotide repeat containing 18 
CHD9                  0.008   chromodomain helicase DNA binding protein 9 
FOXN3                 0.008   checkpoint suppressor 1 isoform 1 
FOXN3                 0.008   checkpoint suppressor 1 isoform 2 
FLG                   0.007   filaggrin 
MCRS1                 0.007   microspherule protein 1 isoform 1 
MCRS1                 0.007   microspherule protein 1 isoform 2 
POLK                  0.006   DNA-directed DNA polymerase kappa 
PRDM2                 0.006   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.006   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.006   retinoblastoma protein-binding zinc finger protein i...
TP73                  0.006   tumor protein p73 isoform d 
AKAP12                0.006   A kinase (PRKA) anchor protein 12 isoform 1 
AKAP12                0.006   A kinase (PRKA) anchor protein 12 isoform 2 
RLIM                  0.005   ring finger protein, LIM domain interacting 
RLIM                  0.005   ring finger protein, LIM domain interacting 
ACACB                 0.005   acetyl-Coenzyme A carboxylase beta 
LRRFIP2               0.005   leucine rich repeat (in FLII) interacting protein 2 i...
AMOT                  0.005   angiomotin isoform 2 
AMOT                  0.005   angiomotin isoform 1 
PPFIA2                0.005   PTPRF interacting protein alpha 2 
NHSL2                 0.005   NHS-like 2 
NCOA3                 0.005   nuclear receptor coactivator 3 isoform a 
NCOA3                 0.005   nuclear receptor coactivator 3 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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