Guide to the Human Genome
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Name: TP73 Sequence: fasta or formatted (426aa) NCBI GI: 187829052
Description:

tumor protein p73 isoform d

Referenced in:

p53 Pathway

Other entries for this name:
alt prot [587aa] tumor protein p73 isoform b
alt prot [450aa] tumor protein p73 isoform c
alt prot [636aa] tumor protein p73 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         32           2
 C cysteine            1.6          7           1
 D aspartate           4.2         18           2
 E glutamate           5.2         22           1
 F phenylalanine       3.1         13           2
 G glycine             5.2         22           2
 H histidine           3.8         16           2
 I isoleucine          3.3         14           3
 K lysine              4.0         17           2
 L leucine             7.3         31           2
 M methionine          2.3         10           1
 N asparagine          3.1         13           2
 P proline            10.8         46           4
 Q glutamine           7.0         30           4
 R arginine            8.0         34           2
 S serine              8.0         34           2
 T threonine           5.4         23           2
 V valine              6.6         28           3
 W tryptophan          0.5          2           1
 Y tyrosine            3.3         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor protein p73 isoform d 
TP73                  0.811   tumor protein p73 isoform c 
TP73                  0.811   tumor protein p73 isoform b 
TP73                  0.779   tumor protein p73 isoform a 
TP63                  0.535   tumor protein p63 isoform 6 
TP63                  0.535   tumor protein p63 isoform 5 
TP63                  0.535   tumor protein p63 isoform 4 
TP63                  0.535   tumor protein p63 isoform 3 
TP63                  0.535   tumor protein p63 isoform 2 
TP63                  0.535   tumor protein p63 isoform 1 
TP53                  0.295   tumor protein p53 isoform a 
TP53                  0.295   tumor protein p53 isoform a 
TP53                  0.269   tumor protein p53 isoform b 
TP53                  0.269   tumor protein p53 isoform c 
TP53                  0.248   tumor protein p53 isoform d 
TP53                  0.222   tumor protein p53 isoform f 
TP53                  0.222   tumor protein p53 isoform e 
NCOR2                 0.022   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.022   nuclear receptor co-repressor 2 isoform 1 
MNT                   0.016   MAX binding protein 
POU6F2                0.015   POU domain, class 6, transcription factor 2 
MED15                 0.012   mediator complex subunit 15 isoform a 
MED15                 0.012   mediator complex subunit 15 isoform b 
TCERG1                0.012   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.012   transcription elongation regulator 1 isoform 1 [Homo...
MUC5AC                0.011   mucin 5AC 
TCF20                 0.011   transcription factor 20 isoform 2 
TCF20                 0.011   transcription factor 20 isoform 1 
MED12                 0.009   mediator complex subunit 12 
ZFHX3                 0.009   AT-binding transcription factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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