Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ACACB Sequence: fasta or formatted (2458aa) NCBI GI: 134142062
Description:

acetyl-Coenzyme A carboxylase beta

Referenced in:

Fatty Acid Synthesis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9        170           2
 C cysteine            1.4         35           1
 D aspartate           5.1        125           2
 E glutamate           7.2        177           2
 F phenylalanine       4.1        102           2
 G glycine             6.5        159           4
 H histidine           2.7         67           2
 I isoleucine          6.3        154           2
 K lysine              4.9        121           2
 L leucine             9.6        237           3
 M methionine          2.9         71           2
 N asparagine          3.7         91           4
 P proline             5.3        131           2
 Q glutamine           4.3        106           2
 R arginine            5.9        145           3
 S serine              6.7        165           3
 T threonine           4.9        121           3
 V valine              7.1        175           3
 W tryptophan          1.2         29           1
 Y tyrosine            3.1         77           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acetyl-Coenzyme A carboxylase beta 
ACACA                 0.716   acetyl-Coenzyme A carboxylase alpha isoform 2 
ACACA                 0.716   acetyl-Coenzyme A carboxylase alpha isoform 2 
ACACA                 0.716   acetyl-Coenzyme A carboxylase alpha isoform 1 
ACACA                 0.715   acetyl-Coenzyme A carboxylase alpha isoform 3 
ACACA                 0.714   acetyl-Coenzyme A carboxylase alpha isoform 4 
PCCA                  0.045   propionyl-Coenzyme A carboxylase, alpha polypeptide ...
PCCA                  0.045   propionyl-Coenzyme A carboxylase, alpha polypeptide...
MCCC1                 0.043   methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) pr...
PC                    0.039   pyruvate carboxylase precursor 
PC                    0.039   pyruvate carboxylase precursor 
PC                    0.039   pyruvate carboxylase precursor 
PCCB                  0.011   propionyl Coenzyme A carboxylase, beta polypeptide ...
CAD                   0.008   carbamoylphosphate synthetase 2/aspartate transcarba...
CPS1                  0.006   carbamoyl-phosphate synthetase 1 isoform c 
CPS1                  0.006   carbamoyl-phosphate synthetase 1 isoform a precurso...
CPS1                  0.006   carbamoyl-phosphate synthetase 1 isoform b precursor...
MCCC2                 0.005   methylcrotonoyl-Coenzyme A carboxylase 2 (beta) [Hom...
TCOF1                 0.004   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.004   Treacher Collins-Franceschetti syndrome 1 isoform b ...
TCOF1                 0.004   Treacher Collins-Franceschetti syndrome 1 isoform a ...
SYN2                  0.003   synapsin II isoform IIa 
SRRM2                 0.003   splicing coactivator subunit SRm300 
RIMKLA                0.003   ribosomal modification protein rimK-like family mem...
MUC4                  0.003   mucin 4 isoform a 
GPATCH1               0.003   G patch domain containing 1 
TBKBP1                0.003   TBK1 binding protein 1 
MADD                  0.003   MAP-kinase activating death domain-containing prote...
NOLC1                 0.003   nucleolar and coiled-body phosphoprotein 1 
BIN2                  0.003   bridging integrator 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press