Guide to the Human Genome
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Name: FAM73A Sequence: fasta or formatted (632aa) NCBI GI: 38348384
Description:

hypothetical protein LOC374986

Referenced in:

Additional Conserved Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         53           2
 C cysteine            2.7         17           2
 D aspartate           5.7         36           2
 E glutamate           8.1         51           2
 F phenylalanine       5.2         33           2
 G glycine             4.7         30           2
 H histidine           2.5         16           2
 I isoleucine          4.9         31           2
 K lysine              5.9         37           3
 L leucine            11.2         71           2
 M methionine          2.2         14           1
 N asparagine          3.6         23           2
 P proline             2.7         17           2
 Q glutamine           3.3         21           2
 R arginine            4.9         31           2
 S serine             10.3         65           3
 T threonine           4.3         27           2
 V valine              5.4         34           2
 W tryptophan          1.4          9           1
 Y tyrosine            2.5         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC374986 
FAM73B                0.303   hypothetical protein LOC84895 
TNRC18                0.006   trinucleotide repeat containing 18 
PDE4A                 0.006   phosphodiesterase 4A isoform 3 
PDE4A                 0.006   phosphodiesterase 4A isoform 2 
PDE4A                 0.006   phosphodiesterase 4A isoform 1 
PDE4A                 0.006   phosphodiesterase 4A isoform 4 
STX16                 0.006   syntaxin 16 isoform a 
MYT1L                 0.006   myelin transcription factor 1-like 
STX16                 0.006   syntaxin 16 isoform d 
STX16                 0.006   syntaxin 16 isoform c 
STX16                 0.006   syntaxin 16 isoform b 
NFX1                  0.005   nuclear transcription factor, X-box binding 1 isofor...
LOC100133515          0.005   PREDICTED: hypothetical protein 
TPR                   0.004   nuclear pore complex-associated protein TPR 
MPP5                  0.004   membrane protein, palmitoylated 5 
LOC729815             0.004   PREDICTED: hypothetical protein 
CDK5RAP2              0.004   CDK5 regulatory subunit associated protein 2 isoform...
CDK5RAP2              0.004   CDK5 regulatory subunit associated protein 2 isoform...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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