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Search of human proteins with 32698884
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32698884 calcium binding protein 7 [Homo sapiens]
(215 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32698884 calcium binding protein 7 [Homo sapiens] 434 e-122
gi|63054822 calneuron 1 isoform 2 [Homo sapiens] 266 8e-72
gi|157743275 calneuron 1 isoform 1 [Homo sapiens] 266 8e-72
gi|11067753 calcium binding protein 5 [Homo sapiens] 91 1e-18
gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens] 87 1e-17
gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens] 87 1e-17
gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens] 85 4e-17
gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens] 85 4e-17
gi|58218968 calmodulin 3 [Homo sapiens] 83 2e-16
gi|4502549 calmodulin 2 [Homo sapiens] 83 2e-16
gi|5901912 calmodulin 1 [Homo sapiens] 83 2e-16
gi|21624641 calcium binding protein 4 [Homo sapiens] 83 2e-16
gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens] 82 3e-16
gi|4885111 calmodulin-like 3 [Homo sapiens] 79 4e-15
gi|4757902 caltractin [Homo sapiens] 73 2e-13
gi|4507617 fast skeletal muscle troponin C [Homo sapiens] 73 2e-13
gi|4757974 centrin 1 [Homo sapiens] 73 2e-13
gi|223278387 calmodulin-like 5 [Homo sapiens] 68 7e-12
gi|4507615 troponin C, slow [Homo sapiens] 59 2e-09
gi|50897266 calmodulin-like 6 [Homo sapiens] 59 4e-09
gi|46397403 centrin 3 [Homo sapiens] 58 5e-09
gi|4505303 smooth muscle and non-muscle myosin alkali light chai... 57 1e-08
gi|110227594 calmodulin-like 4 isoform 1 [Homo sapiens] 53 2e-07
gi|223718250 plastin 1 [Homo sapiens] 52 5e-07
gi|223718246 plastin 1 [Homo sapiens] 52 5e-07
gi|209862851 plastin 3 [Homo sapiens] 51 6e-07
gi|7549809 plastin 3 [Homo sapiens] 51 6e-07
gi|167614506 L-plastin [Homo sapiens] 51 8e-07
gi|221316729 EF-hand calcium binding domain 2 isoform b [Homo sa... 50 2e-06
gi|14150108 EF-hand calcium binding domain 2 isoform a [Homo sap... 50 2e-06
>gi|32698884 calcium binding protein 7 [Homo sapiens]
Length = 215
Score = 434 bits (1116), Expect = e-122
Identities = 215/215 (100%), Positives = 215/215 (100%)
Query: 1 MPFHPVTAALMYRGIYTVPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGT 60
MPFHPVTAALMYRGIYTVPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGT
Sbjct: 1 MPFHPVTAALMYRGIYTVPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGT 60
Query: 61 AMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEKFHGTDFDTVF 120
AMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEKFHGTDFDTVF
Sbjct: 61 AMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEKFHGTDFDTVF 120
Query: 121 WKCDMQKLTVDELKRLLYDTFCEHLSMKDIENIIMTEEESHLGTAEECPVDVETCSNQQI 180
WKCDMQKLTVDELKRLLYDTFCEHLSMKDIENIIMTEEESHLGTAEECPVDVETCSNQQI
Sbjct: 121 WKCDMQKLTVDELKRLLYDTFCEHLSMKDIENIIMTEEESHLGTAEECPVDVETCSNQQI 180
Query: 181 RQTCVRKSLICAFAIAFIISVMLIAANQVLRSGMK 215
RQTCVRKSLICAFAIAFIISVMLIAANQVLRSGMK
Sbjct: 181 RQTCVRKSLICAFAIAFIISVMLIAANQVLRSGMK 215
>gi|63054822 calneuron 1 isoform 2 [Homo sapiens]
Length = 219
Score = 266 bits (681), Expect = 8e-72
Identities = 138/219 (63%), Positives = 173/219 (78%), Gaps = 4/219 (1%)
Query: 1 MPFHPVTAALMYRGIYTVPNLLS---EQRPVDIPEDELEEIREAFKVFDRDGNGFISKQE 57
MPFH VTA L+Y+G Y +L + ++ +I +EL+EIREAF+V DRDGNGFISKQE
Sbjct: 1 MPFHHVTAGLLYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQE 60
Query: 58 LGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEKFHGTDFD 117
LG AMRSLGYMP+EVEL +I+QRLDMDGDGQVDF+EF+T+LGPKL +S + F G D
Sbjct: 61 LGMAMRSLGYMPSEVELAIIMQRLDMDGDGQVDFDEFMTILGPKLVSSEGRDGFLGNTID 120
Query: 118 TVFWKCDMQKLTVDELKRLLYDTFCEHLSMKDIENIIMTEEESHLGTAEECPVDVE-TCS 176
++FW+ DMQ++T++ELK +LY F +HL+MKDIENII+ EEES T+ C + E S
Sbjct: 121 SIFWQFDMQRITLEELKHILYHAFRDHLTMKDIENIIINEEESLNETSGNCQTEFEGVHS 180
Query: 177 NQQIRQTCVRKSLICAFAIAFIISVMLIAANQVLRSGMK 215
+Q RQTCVRKSLICAFA+AFIISVMLIAANQ+LRSGM+
Sbjct: 181 QKQNRQTCVRKSLICAFAMAFIISVMLIAANQILRSGME 219
>gi|157743275 calneuron 1 isoform 1 [Homo sapiens]
Length = 261
Score = 266 bits (681), Expect = 8e-72
Identities = 138/219 (63%), Positives = 173/219 (78%), Gaps = 4/219 (1%)
Query: 1 MPFHPVTAALMYRGIYTVPNLLS---EQRPVDIPEDELEEIREAFKVFDRDGNGFISKQE 57
MPFH VTA L+Y+G Y +L + ++ +I +EL+EIREAF+V DRDGNGFISKQE
Sbjct: 43 MPFHHVTAGLLYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQE 102
Query: 58 LGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEKFHGTDFD 117
LG AMRSLGYMP+EVEL +I+QRLDMDGDGQVDF+EF+T+LGPKL +S + F G D
Sbjct: 103 LGMAMRSLGYMPSEVELAIIMQRLDMDGDGQVDFDEFMTILGPKLVSSEGRDGFLGNTID 162
Query: 118 TVFWKCDMQKLTVDELKRLLYDTFCEHLSMKDIENIIMTEEESHLGTAEECPVDVE-TCS 176
++FW+ DMQ++T++ELK +LY F +HL+MKDIENII+ EEES T+ C + E S
Sbjct: 163 SIFWQFDMQRITLEELKHILYHAFRDHLTMKDIENIIINEEESLNETSGNCQTEFEGVHS 222
Query: 177 NQQIRQTCVRKSLICAFAIAFIISVMLIAANQVLRSGMK 215
+Q RQTCVRKSLICAFA+AFIISVMLIAANQ+LRSGM+
Sbjct: 223 QKQNRQTCVRKSLICAFAMAFIISVMLIAANQILRSGME 261
>gi|11067753 calcium binding protein 5 [Homo sapiens]
Length = 173
Score = 90.5 bits (223), Expect = 1e-18
Identities = 53/154 (34%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
Query: 15 IYTVPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVEL 74
I+ + +QR + +DE+EE+REAF FD+D +GFIS ++LG MR++GYMP E+EL
Sbjct: 10 IFLRKGIAEKQRERPLGQDEIEELREAFLEFDKDRDGFISCKDLGNLMRTMGYMPTEMEL 69
Query: 75 EVIIQRLDMDGDGQVDFEEFVTLLGPKL--STSGIPEKFHGTDFDTVFWKCDMQKLTVDE 132
+ Q++ M+ G+VDF++FV L+ PKL T+G+ D F ++T+ E
Sbjct: 70 IELGQQIRMNLGGRVDFDDFVELMTPKLLAETAGMIGVQEMRDAFKEFDTNGDGEITLVE 129
Query: 133 LKRLLYDTFCEHLSMKDIENIIMTEEESHLGTAE 166
L++ + E L+ ++I ++ + + GT +
Sbjct: 130 LQQAMQRLLGERLTPREISEVVREADVNGDGTVD 163
Score = 55.8 bits (133), Expect = 3e-08
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 35 LEEIREAFKVFDRDGNGFISKQELGTAM-RSLGYMPNEVELEVIIQRLDMDGDGQVDFEE 93
++E+R+AFK FD +G+G I+ EL AM R LG E+ +++ D++GDG VDFEE
Sbjct: 107 VQEMRDAFKEFDTNGDGEITLVELQQAMQRLLGERLTPREISEVVREADVNGDGTVDFEE 166
Query: 94 FVTLL 98
FV ++
Sbjct: 167 FVKMM 171
>gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens]
Length = 167
Score = 86.7 bits (213), Expect = 1e-17
Identities = 52/145 (35%), Positives = 86/145 (59%), Gaps = 12/145 (8%)
Query: 16 YTVPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELE 75
Y + NL + R + +E+EE+REAF+ FD+D +G+I+ ++LG MR++GYMP E+EL
Sbjct: 7 YPLRNLSRKDR--SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELI 64
Query: 76 VIIQRLDMDGDGQVDFEEFVTLLGPKLSTS-----GIPE-KFHGTDFDTVFWKCDMQKLT 129
+ Q+++M+ G VDF++FV L+GPKL G+ E + +FDT +++
Sbjct: 65 ELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDT----NGDGEIS 120
Query: 130 VDELKRLLYDTFCEHLSMKDIENII 154
EL+ + + +DIE II
Sbjct: 121 TSELREAMRKLLGHQVGHRDIEEII 145
Score = 63.2 bits (152), Expect = 2e-10
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSL-GYMPNEVELEVIIQRLDMDGDGQVDFEE 93
++E+R+AF+ FD +G+G IS EL AMR L G+ ++E II+ +D++GDG+VDFEE
Sbjct: 101 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 160
Query: 94 FVTLL 98
FV ++
Sbjct: 161 FVRMM 165
>gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens]
Length = 220
Score = 86.7 bits (213), Expect = 1e-17
Identities = 51/143 (35%), Positives = 85/143 (59%), Gaps = 7/143 (4%)
Query: 15 IYTVPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVEL 74
I+ P++ + Q ++ +E+EE++ AF+ FDRD +G+I +ELG MR+LGYMP E+EL
Sbjct: 60 IFLRPSIAATQLDRELRPEEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMEL 119
Query: 75 EVIIQRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEKFHGTDFDTVFWKCDMQ---KLTVD 131
I Q++ G+VDFE+FV L+GPKL + + + F + D +++V
Sbjct: 120 IEISQQI---SGGKVDFEDFVELMGPKL-LAETADMIGVRELRDAFREFDTNGDGRISVG 175
Query: 132 ELKRLLYDTFCEHLSMKDIENII 154
EL+ L E LS ++++ I+
Sbjct: 176 ELRAALKALLGERLSQREVDEIL 198
Score = 58.2 bits (139), Expect = 5e-09
Identities = 29/65 (44%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSL-GYMPNEVELEVIIQRLDMDGDGQVDFEE 93
+ E+R+AF+ FD +G+G IS EL A+++L G ++ E++ I+Q +D++GDG VDFEE
Sbjct: 154 VRELRDAFREFDTNGDGRISVGELRAALKALLGERLSQREVDEILQDVDLNGDGLVDFEE 213
Query: 94 FVTLL 98
FV ++
Sbjct: 214 FVRMM 218
>gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]
Length = 370
Score = 85.1 bits (209), Expect = 4e-17
Identities = 48/128 (37%), Positives = 79/128 (61%), Gaps = 10/128 (7%)
Query: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
+E+EE+REAF+ FD+D +G+I+ ++LG MR++GYMP E+EL + Q+++M+ G VDF+
Sbjct: 225 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 284
Query: 93 EFVTLLGPKLSTS-----GIPE-KFHGTDFDTVFWKCDMQKLTVDELKRLLYDTFCEHLS 146
+FV L+GPKL G+ E + +FDT +++ EL+ + +
Sbjct: 285 DFVELMGPKLLAETADMIGVKELRDAFREFDT----NGDGEISTSELREAMRKLLGHQVG 340
Query: 147 MKDIENII 154
+DIE II
Sbjct: 341 HRDIEEII 348
Score = 63.2 bits (152), Expect = 2e-10
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSL-GYMPNEVELEVIIQRLDMDGDGQVDFEE 93
++E+R+AF+ FD +G+G IS EL AMR L G+ ++E II+ +D++GDG+VDFEE
Sbjct: 304 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 363
Query: 94 FVTLL 98
FV ++
Sbjct: 364 FVRMM 368
>gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens]
Length = 227
Score = 85.1 bits (209), Expect = 4e-17
Identities = 48/128 (37%), Positives = 79/128 (61%), Gaps = 10/128 (7%)
Query: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
+E+EE+REAF+ FD+D +G+I+ ++LG MR++GYMP E+EL + Q+++M+ G VDF+
Sbjct: 82 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 141
Query: 93 EFVTLLGPKLSTS-----GIPE-KFHGTDFDTVFWKCDMQKLTVDELKRLLYDTFCEHLS 146
+FV L+GPKL G+ E + +FDT +++ EL+ + +
Sbjct: 142 DFVELMGPKLLAETADMIGVKELRDAFREFDT----NGDGEISTSELREAMRKLLGHQVG 197
Query: 147 MKDIENII 154
+DIE II
Sbjct: 198 HRDIEEII 205
Score = 63.2 bits (152), Expect = 2e-10
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSL-GYMPNEVELEVIIQRLDMDGDGQVDFEE 93
++E+R+AF+ FD +G+G IS EL AMR L G+ ++E II+ +D++GDG+VDFEE
Sbjct: 161 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 220
Query: 94 FVTLL 98
FV ++
Sbjct: 221 FVRMM 225
>gi|58218968 calmodulin 3 [Homo sapiens]
Length = 149
Score = 83.2 bits (204), Expect = 2e-16
Identities = 44/125 (35%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
+ E+++ E +EAF +FD+DG+G I+ +ELGT MRSLG P E EL+ +I +D DG+G +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 90 DFEEFVTLLGPKLSTSGIPEKFHGTDFDTVFWKCDMQKLTVDELKRLLYDTFCEHLSMKD 149
DF EF+T++ K+ + E+ + VF K ++ EL+ ++ E L+ ++
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIR--EAFRVFDKDGNGYISAAELRHVM-TNLGEKLTDEE 121
Query: 150 IENII 154
++ +I
Sbjct: 122 VDEMI 126
Score = 75.5 bits (184), Expect = 3e-14
Identities = 36/69 (52%), Positives = 50/69 (72%)
Query: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
D EEIREAF+VFD+DGNG+IS EL M +LG + E++ +I+ D+DGDGQV++E
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 93 EFVTLLGPK 101
EFV ++ K
Sbjct: 141 EFVQMMTAK 149
>gi|4502549 calmodulin 2 [Homo sapiens]
Length = 149
Score = 83.2 bits (204), Expect = 2e-16
Identities = 44/125 (35%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
+ E+++ E +EAF +FD+DG+G I+ +ELGT MRSLG P E EL+ +I +D DG+G +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 90 DFEEFVTLLGPKLSTSGIPEKFHGTDFDTVFWKCDMQKLTVDELKRLLYDTFCEHLSMKD 149
DF EF+T++ K+ + E+ + VF K ++ EL+ ++ E L+ ++
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIR--EAFRVFDKDGNGYISAAELRHVM-TNLGEKLTDEE 121
Query: 150 IENII 154
++ +I
Sbjct: 122 VDEMI 126
Score = 75.5 bits (184), Expect = 3e-14
Identities = 36/69 (52%), Positives = 50/69 (72%)
Query: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
D EEIREAF+VFD+DGNG+IS EL M +LG + E++ +I+ D+DGDGQV++E
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 93 EFVTLLGPK 101
EFV ++ K
Sbjct: 141 EFVQMMTAK 149
>gi|5901912 calmodulin 1 [Homo sapiens]
Length = 149
Score = 83.2 bits (204), Expect = 2e-16
Identities = 44/125 (35%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
+ E+++ E +EAF +FD+DG+G I+ +ELGT MRSLG P E EL+ +I +D DG+G +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 90 DFEEFVTLLGPKLSTSGIPEKFHGTDFDTVFWKCDMQKLTVDELKRLLYDTFCEHLSMKD 149
DF EF+T++ K+ + E+ + VF K ++ EL+ ++ E L+ ++
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIR--EAFRVFDKDGNGYISAAELRHVM-TNLGEKLTDEE 121
Query: 150 IENII 154
++ +I
Sbjct: 122 VDEMI 126
Score = 75.5 bits (184), Expect = 3e-14
Identities = 36/69 (52%), Positives = 50/69 (72%)
Query: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
D EEIREAF+VFD+DGNG+IS EL M +LG + E++ +I+ D+DGDGQV++E
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 93 EFVTLLGPK 101
EFV ++ K
Sbjct: 141 EFVQMMTAK 149
>gi|21624641 calcium binding protein 4 [Homo sapiens]
Length = 275
Score = 82.8 bits (203), Expect = 2e-16
Identities = 39/74 (52%), Positives = 55/74 (74%)
Query: 29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQ 88
++ +EL+E++ AF+ FD D +G+IS +ELG MR+LGYMP E+EL + Q + M G+
Sbjct: 125 ELGPEELDELQAAFEEFDTDRDGYISHRELGDCMRTLGYMPTEMELLEVSQHIKMRMGGR 184
Query: 89 VDFEEFVTLLGPKL 102
VDFEEFV L+GPKL
Sbjct: 185 VDFEEFVELIGPKL 198
Score = 50.8 bits (120), Expect = 8e-07
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSL-GYMPNEVELEVIIQRLDMDGDGQVDFEE 93
+ E+R AF+ FDRD +G I+ EL A+ +L G EL+ +++ +D++GDG VDF+E
Sbjct: 208 VRELRIAFREFDRDRDGRITVAELREAVPALLGEPLAGPELDEMLREVDLNGDGTVDFDE 267
Query: 94 FVTLL 98
FV +L
Sbjct: 268 FVMML 272
>gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens]
Length = 163
Score = 82.4 bits (202), Expect = 3e-16
Identities = 48/129 (37%), Positives = 78/129 (60%), Gaps = 7/129 (5%)
Query: 29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQ 88
++ +E+EE++ AF+ FDRD +G+I +ELG MR+LGYMP E+EL I Q++ G+
Sbjct: 17 ELRPEEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMELIEISQQI---SGGK 73
Query: 89 VDFEEFVTLLGPKLSTSGIPEKFHGTDFDTVFWKCDMQ---KLTVDELKRLLYDTFCEHL 145
VDFE+FV L+GPKL + + + F + D +++V EL+ L E L
Sbjct: 74 VDFEDFVELMGPKL-LAETADMIGVRELRDAFREFDTNGDGRISVGELRAALKALLGERL 132
Query: 146 SMKDIENII 154
S ++++ I+
Sbjct: 133 SQREVDEIL 141
Score = 58.2 bits (139), Expect = 5e-09
Identities = 29/65 (44%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSL-GYMPNEVELEVIIQRLDMDGDGQVDFEE 93
+ E+R+AF+ FD +G+G IS EL A+++L G ++ E++ I+Q +D++GDG VDFEE
Sbjct: 97 VRELRDAFREFDTNGDGRISVGELRAALKALLGERLSQREVDEILQDVDLNGDGLVDFEE 156
Query: 94 FVTLL 98
FV ++
Sbjct: 157 FVRMM 161
>gi|4885111 calmodulin-like 3 [Homo sapiens]
Length = 149
Score = 78.6 bits (192), Expect = 4e-15
Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
+ E+++ E +EAF +FD+DG+G I+ +ELGT MRSLG P E EL ++ +D DG+G V
Sbjct: 5 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTV 64
Query: 90 DFEEFVTLLGPKLSTSGIPEKFHGTDFDTVFWKCDMQKLTVDELKRLLYDTFCEHLSMKD 149
DF EF+ ++ K+ + E+ + VF K ++ EL+ ++ E LS ++
Sbjct: 65 DFPEFLGMMARKMKDTDNEEEIR--EAFRVFDKDGNGFVSAAELRHVM-TRLGEKLSDEE 121
Query: 150 IENII 154
++ +I
Sbjct: 122 VDEMI 126
Score = 74.7 bits (182), Expect = 5e-14
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
D EEIREAF+VFD+DGNGF+S EL M LG ++ E++ +I+ D DGDGQV++E
Sbjct: 81 DNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYE 140
Query: 93 EFVTLLGPK 101
EFV +L K
Sbjct: 141 EFVRVLVSK 149
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 73.2 bits (178), Expect = 2e-13
Identities = 42/139 (30%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQ 88
++ E++ +EIREAF +FD DG G I +EL AMR+LG+ P + E++ +I +D +G G+
Sbjct: 24 ELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGK 83
Query: 89 VDFEEFVTLLGPKLSTSGIPEKFHGTDFDTVFWKCDMQKLTVDELKRLLYDTFCEHLSMK 148
++F +F+T++ K+S E+ +F + K++ LKR+ + E+L+ +
Sbjct: 84 MNFGDFLTVMTQKMSEKDTKEEI--LKAFKLFDDDETGKISFKNLKRVAKE-LGENLTDE 140
Query: 149 DIENIIMTEEESHLGTAEE 167
+++ +I + G E
Sbjct: 141 ELQEMIDEADRDGDGEVSE 159
Score = 52.0 bits (123), Expect = 4e-07
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 32 EDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDF 91
+D EEI +AFK+FD D G IS + L + LG + EL+ +I D DGDG+V
Sbjct: 100 KDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSE 159
Query: 92 EEFVTLL 98
+EF+ ++
Sbjct: 160 QEFLRIM 166
>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
Length = 160
Score = 73.2 bits (178), Expect = 2e-13
Identities = 33/69 (47%), Positives = 47/69 (68%)
Query: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
+ E+ + E + AF +FD DG G IS +ELGT MR LG P + EL+ II+ +D DG G +
Sbjct: 12 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 71
Query: 90 DFEEFVTLL 98
DFEEF+ ++
Sbjct: 72 DFEEFLVMM 80
Score = 55.1 bits (131), Expect = 4e-08
Identities = 24/78 (30%), Positives = 46/78 (58%)
Query: 21 LLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQR 80
++ Q D EE+ E F++FDR+ +G+I +EL R+ G + E+E +++
Sbjct: 79 MMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVTDEEIESLMKD 138
Query: 81 LDMDGDGQVDFEEFVTLL 98
D + DG++DF+EF+ ++
Sbjct: 139 GDKNNDGRIDFDEFLKMM 156
>gi|4757974 centrin 1 [Homo sapiens]
Length = 172
Score = 73.2 bits (178), Expect = 2e-13
Identities = 41/139 (29%), Positives = 79/139 (56%), Gaps = 3/139 (2%)
Query: 29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQ 88
++ ED+ +E+REAF +FD DG+G I +EL AMR+LG+ P + E++ +I +D +G G+
Sbjct: 24 ELTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEVDREGTGK 83
Query: 89 VDFEEFVTLLGPKLSTSGIPEKFHGTDFDTVFWKCDMQKLTVDELKRLLYDTFCEHLSMK 148
+ F +F+ ++ K+S E+ +F + K++ LKR+ + E+L+ +
Sbjct: 84 ISFNDFLAVMTQKMSEKDTKEEI--LKAFRLFDDDETGKISFKNLKRVA-NELGENLTDE 140
Query: 149 DIENIIMTEEESHLGTAEE 167
+++ +I + G E
Sbjct: 141 ELQEMIDEADRDGDGEVNE 159
Score = 51.6 bits (122), Expect = 5e-07
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 32 EDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDF 91
+D EEI +AF++FD D G IS + L LG + EL+ +I D DGDG+V+
Sbjct: 100 KDTKEEILKAFRLFDDDETGKISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNE 159
Query: 92 EEFVTLL 98
EEF+ ++
Sbjct: 160 EEFLRIM 166
>gi|223278387 calmodulin-like 5 [Homo sapiens]
Length = 146
Score = 67.8 bits (164), Expect = 7e-12
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 12/110 (10%)
Query: 31 PEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVD 90
PE+E + ++AF D DGNG I+ QELG A+++ G +E +L +I +D DGDG++
Sbjct: 7 PEEEAQ-YKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDGDGEIS 65
Query: 91 FEEFVTLLGPKLSTSGIPEKFHGTDFDTVFWKCDMQ---KLTVDELKRLL 137
F+EF+T K + +G+ D F D +TVDEL+R +
Sbjct: 66 FQEFLT--AAKKARAGL------EDLQVAFRAFDQDGDGHITVDELRRAM 107
Score = 59.7 bits (143), Expect = 2e-09
Identities = 28/64 (43%), Positives = 44/64 (68%)
Query: 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEF 94
LE+++ AF+ FD+DG+G I+ EL AM LG + EL+ +I+ D+D DG+V++EEF
Sbjct: 80 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 139
Query: 95 VTLL 98
+L
Sbjct: 140 ARML 143
>gi|4507615 troponin C, slow [Homo sapiens]
Length = 161
Score = 59.3 bits (142), Expect = 2e-09
Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 5/137 (3%)
Query: 30 IPEDELEEIREAFKVFDRDG-NGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQ 88
+ E++ E + AF +F +G IS +ELG MR LG P EL+ +I +D DG G
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 89 VDFEEFVTLL--GPKLSTSGIPEKFHGTDFDTVFWKCDMQKLTVDELKRLLYDTFCEHLS 146
VDF+EF+ ++ K + G E+ +D +F K + +DELK +L T E ++
Sbjct: 72 VDFDEFLVMMVRCMKDDSKGKSEE-ELSDLFRMFDKNADGYIDLDELKIMLQAT-GETIT 129
Query: 147 MKDIENIIMTEEESHLG 163
DIE ++ ++++ G
Sbjct: 130 EDDIEELMKDGDKNNDG 146
Score = 46.6 bits (109), Expect = 2e-05
Identities = 18/63 (28%), Positives = 41/63 (65%)
Query: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFV 95
EE+ + F++FD++ +G+I EL +++ G E ++E +++ D + DG++D++EF+
Sbjct: 95 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Query: 96 TLL 98
+
Sbjct: 155 EFM 157
>gi|50897266 calmodulin-like 6 [Homo sapiens]
Length = 181
Score = 58.5 bits (140), Expect = 4e-09
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 32 EDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDF 91
+++ E+R AF+VFD++G G+I L + + G NEVE E +++ D DGD +D+
Sbjct: 106 QNQESELRAAFRVFDKEGKGYIDWNTLKYVLMNAGEPLNEVEAEQMMKEADKDGDRTIDY 165
Query: 92 EEFVTLL 98
EEFV ++
Sbjct: 166 EEFVAMM 172
Score = 44.3 bits (103), Expect = 8e-05
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
++++E + F++FD +GNG + EL M LG P + EL + + +D D G + +
Sbjct: 33 EQIKEYKGVFEMFDEEGNGEVKTGELEWLMSLLGINPTKSELASMAKDVDRDNKGFFNCD 92
Query: 93 EFVTLLG 99
F+ L+G
Sbjct: 93 GFLALMG 99
>gi|46397403 centrin 3 [Homo sapiens]
Length = 167
Score = 58.2 bits (139), Expect = 5e-09
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
+ D EEI +AFK+FD D +G IS + L R LG ++ EL +I+ D DGDG++
Sbjct: 95 LERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELRAMIEEFDKDGDGEI 154
Query: 90 DFEEFVTLL 98
+ EEF+ ++
Sbjct: 155 NQEEFIAIM 163
Score = 50.1 bits (118), Expect = 1e-06
Identities = 22/66 (33%), Positives = 43/66 (65%)
Query: 29 DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQ 88
++ E++ +EI++AF++FD D + I EL AMR+LG+ + ++ I++ D + G+
Sbjct: 21 ELSEEQKQEIKDAFELFDTDKDEAIDYHELKVAMRALGFDVKKADVLKILKDYDREATGK 80
Query: 89 VDFEEF 94
+ FE+F
Sbjct: 81 ITFEDF 86
>gi|4505303 smooth muscle and non-muscle myosin alkali light chain
6B [Homo sapiens]
Length = 208
Score = 57.0 bits (136), Expect = 1e-08
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Query: 28 VDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVII--QRLDMDG 85
++ +D+LEE +EAF++FDR G+G I + G MR+LG P E+ ++ + D
Sbjct: 59 IEFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELK 118
Query: 86 DGQVDFEEFVTLLGPKLSTSGIPEKFHGTDFDTVFWKCDMQKLTVDELKRLLYDTFCEHL 145
+VDFE F+ +L G + VF K K+ EL+ +L T E +
Sbjct: 119 SRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVL-TTLGEKM 177
Query: 146 SMKDIENIIMTEEESH 161
+ +++E ++ E+S+
Sbjct: 178 TEEEVETVLAGHEDSN 193
>gi|110227594 calmodulin-like 4 isoform 1 [Homo sapiens]
Length = 196
Score = 52.8 bits (125), Expect = 2e-07
Identities = 23/69 (33%), Positives = 42/69 (60%)
Query: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
+ +D++ E +E F ++D+ G I +L AMR LG P E++ +Q +DG+G++
Sbjct: 48 LSQDQINEYKECFSLYDKQQRGKIKATDLMVAMRCLGASPTPGEVQRHLQTHGIDGNGEL 107
Query: 90 DFEEFVTLL 98
DF F+T++
Sbjct: 108 DFSTFLTIM 116
Score = 38.5 bits (88), Expect = 0.004
Identities = 17/64 (26%), Positives = 37/64 (57%)
Query: 32 EDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDF 91
ED +EI A + D++ G++ +L + + SLG E++ + + D++ +G+V +
Sbjct: 123 EDPKKEILLAMLMVDKEKKGYVMASDLRSKLTSLGEKLTHKEVDDLFREADIEPNGKVKY 182
Query: 92 EEFV 95
+EF+
Sbjct: 183 DEFI 186
>gi|223718250 plastin 1 [Homo sapiens]
Length = 629
Score = 51.6 bits (122), Expect = 5e-07
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 24 EQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSL-----GYMPNEVELEVII 78
E I +ELEE++EAF D D +G++S EL + GY E+ +E I+
Sbjct: 2 ENSTTTISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREI-VEKIL 60
Query: 79 QRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEKF 111
D + DG++ FEEFV+L+ +L + I + F
Sbjct: 61 SVADSNKDGKISFEEFVSLM-QELKSKDISKTF 92
>gi|223718246 plastin 1 [Homo sapiens]
Length = 629
Score = 51.6 bits (122), Expect = 5e-07
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 24 EQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSL-----GYMPNEVELEVII 78
E I +ELEE++EAF D D +G++S EL + GY E+ +E I+
Sbjct: 2 ENSTTTISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREI-VEKIL 60
Query: 79 QRLDMDGDGQVDFEEFVTLLGPKLSTSGIPEKF 111
D + DG++ FEEFV+L+ +L + I + F
Sbjct: 61 SVADSNKDGKISFEEFVSLM-QELKSKDISKTF 92
>gi|209862851 plastin 3 [Homo sapiens]
Length = 630
Score = 51.2 bits (121), Expect = 6e-07
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 22 LSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRL 81
+ E I +DEL+E++EAF D + NGFI EL + ++ IIQ+L
Sbjct: 1 MDEMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKL 60
Query: 82 DMDG----DGQVDFEEFVTLLGPKLSTSGIPEKF 111
+DG DG++ F+EFV + ++ +S I + F
Sbjct: 61 MLDGDRNKDGKISFDEFVYIF-QEVKSSDIAKTF 93
>gi|7549809 plastin 3 [Homo sapiens]
Length = 630
Score = 51.2 bits (121), Expect = 6e-07
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 22 LSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRL 81
+ E I +DEL+E++EAF D + NGFI EL + ++ IIQ+L
Sbjct: 1 MDEMATTQISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKL 60
Query: 82 DMDG----DGQVDFEEFVTLLGPKLSTSGIPEKF 111
+DG DG++ F+EFV + ++ +S I + F
Sbjct: 61 MLDGDRNKDGKISFDEFVYIF-QEVKSSDIAKTF 93
>gi|167614506 L-plastin [Homo sapiens]
Length = 627
Score = 50.8 bits (120), Expect = 8e-07
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSL-----GYMPNEVELEVIIQRLDMD 84
+ ++E+ E+REAF D DGNG+IS EL ++ GY E+ E ++ D+D
Sbjct: 6 VSDEEMMELREAFAKVDTDGNGYISFNELNDLFKAACLPLPGYRVREI-TENLMATGDLD 64
Query: 85 GDGQVDFEEFVTLLGPKLST 104
DG++ F+EF+ + ST
Sbjct: 65 QDGRISFDEFIKIFHGLKST 84
>gi|221316729 EF-hand calcium binding domain 2 isoform b [Homo
sapiens]
Length = 133
Score = 49.7 bits (117), Expect = 2e-06
Identities = 24/64 (37%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRL-DMDGDGQVDFEEF 94
++I+EAF+VFD + N + +E+GT +RSLG P E EL +I + + + G + FE+F
Sbjct: 17 KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
Query: 95 VTLL 98
+ ++
Sbjct: 77 LPVM 80
>gi|14150108 EF-hand calcium binding domain 2 isoform a [Homo
sapiens]
Length = 162
Score = 49.7 bits (117), Expect = 2e-06
Identities = 24/64 (37%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRL-DMDGDGQVDFEEF 94
++I+EAF+VFD + N + +E+GT +RSLG P E EL +I + + + G + FE+F
Sbjct: 17 KKIKEAFEVFDHESNNTVDVREIGTIIRSLGCCPTEGELHDLIAEVEEEEPTGYIRFEKF 76
Query: 95 VTLL 98
+ ++
Sbjct: 77 LPVM 80
Score = 34.7 bits (78), Expect = 0.063
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 21 LLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQR 80
+L E++ IPED L AF+V D GF++K EL M G ++ E+E ++
Sbjct: 83 ILLERKYRPIPEDVL---LRAFEVLDSAKRGFLTKDELIKYMTEEGEPFSQEEMEEMLSA 139
Query: 81 LDMDGDGQVDFEEFVTLL 98
+++++++T++
Sbjct: 140 AIDPESNSINYKDYITMM 157
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,626,074
Number of Sequences: 37866
Number of extensions: 323774
Number of successful extensions: 1415
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 985
Number of HSP's gapped (non-prelim): 426
length of query: 215
length of database: 18,247,518
effective HSP length: 98
effective length of query: 117
effective length of database: 14,536,650
effective search space: 1700788050
effective search space used: 1700788050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.