Name: PLS1 | Sequence: fasta or formatted (629aa) | NCBI GI: 223718250 | |
Description: plastin 1
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Referenced in:
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Other entries for this name:
alt mRNA [629aa] plastin 1 | |||
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.7 42 1 C cysteine 1.1 7 1 D aspartate 5.9 37 2 E glutamate 7.9 50 3 F phenylalanine 3.0 19 1 G glycine 5.6 35 2 H histidine 1.4 9 1 I isoleucine 7.9 50 3 K lysine 8.1 51 3 L leucine 11.9 75 3 M methionine 2.4 15 1 N asparagine 8.4 53 3 P proline 3.8 24 2 Q glutamine 2.2 14 1 R arginine 3.2 20 2 S serine 7.3 46 2 T threonine 4.0 25 3 V valine 5.4 34 2 W tryptophan 1.3 8 1 Y tyrosine 2.4 15 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 plastin 1 PLS1 1.000 plastin 1 PLS3 0.785 plastin 3 PLS3 0.785 plastin 3 LCP1 0.767 L-plastin DST 0.038 dystonin isoform 4 DST 0.038 dystonin isoform 3 DST 0.038 dystonin isoform 2 DST 0.038 dystonin isoform 1 PLEC1 0.036 plectin 1 isoform 11 PLEC1 0.034 plectin 1 isoform 2 PLEC1 0.033 plectin 1 isoform 8 PLEC1 0.033 plectin 1 isoform 10 PLEC1 0.033 plectin 1 isoform 7 PLEC1 0.033 plectin 1 isoform 6 PLEC1 0.033 plectin 1 isoform 3 PLEC1 0.033 plectin 1 isoform 1 LOC652460 0.030 PREDICTED: similar to plectin 1, partial MACF1 0.029 microfilament and actin filament cross-linker protei... FLNA 0.029 filamin A, alpha isoform 2 FLNA 0.029 filamin A, alpha isoform 1 SPTB 0.029 spectrin beta isoform a SPTB 0.029 spectrin beta isoform b SYNE1 0.029 spectrin repeat containing, nuclear envelope 1 isof... ACTN4 0.026 actinin, alpha 4 FLNC 0.025 gamma filamin isoform b FLNC 0.025 gamma filamin isoform a SPTBN4 0.024 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... DMD 0.024 dystrophin Dp427c isoform DMD 0.024 dystrophin Dp427p1 isoformHuman BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.