LCP1 7027

Name: LCP1	Sequence: fasta or formatted (627aa)		NCBI GI: 167614506
Description: L-plastin		Referenced in: Cytoskeleton
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 43 2 C cysteine 1.6 10 1 D aspartate 6.4 40 2 E glutamate 7.8 49 3 F phenylalanine 3.2 20 1 G glycine 6.9 43 3 H histidine 1.3 8 1 I isoleucine 6.7 42 2 K lysine 7.2 45 3 L leucine 11.2 70 3 M methionine 2.7 17 2 N asparagine 8.0 50 2 P proline 3.8 24 2 Q glutamine 2.7 17 2 R arginine 4.6 29 2 S serine 5.1 32 3 T threonine 3.8 24 1 V valine 6.2 39 2 W tryptophan 1.3 8 1 Y tyrosine 2.7 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 L-plastin PLS3 0.813 plastin 3 PLS3 0.813 plastin 3 PLS1 0.760 plastin 1 PLS1 0.760 plastin 1 DST 0.041 dystonin isoform 4 DST 0.041 dystonin isoform 3 DST 0.041 dystonin isoform 2 DST 0.041 dystonin isoform 1 MACF1 0.038 microfilament and actin filament cross-linker protei... PLEC1 0.036 plectin 1 isoform 11 PLEC1 0.035 plectin 1 isoform 10 PLEC1 0.035 plectin 1 isoform 8 PLEC1 0.035 plectin 1 isoform 7 PLEC1 0.035 plectin 1 isoform 6 PLEC1 0.035 plectin 1 isoform 3 PLEC1 0.035 plectin 1 isoform 2 PLEC1 0.035 plectin 1 isoform 1 SPTB 0.033 spectrin beta isoform a SPTB 0.033 spectrin beta isoform b LOC652460 0.032 PREDICTED: similar to plectin 1, partial SPTBN1 0.029 spectrin, beta, non-erythrocytic 1 isoform 2 SPTBN1 0.029 spectrin, beta, non-erythrocytic 1 isoform 1 DMD 0.028 dystrophin Dp427c isoform DMD 0.028 dystrophin Dp427p1 isoform DMD 0.028 dystrophin Dp427m isoform ACTN4 0.027 actinin, alpha 4 SPTBN2 0.026 spectrin, beta, non-erythrocytic 2 UTRN 0.026 utrophin FLNB 0.025 filamin B, beta (actin binding protein 278) Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.