CALN1 6389

Name: CALN1	Sequence: fasta or formatted (261aa)		NCBI GI: 157743275
Description: calneuron 1 isoform 1		Referenced in: Calmodulin and Calcium Neurons
Other entries for this name: alt prot [219aa] calneuron 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 14 2 C cysteine 1.1 3 1 D aspartate 6.1 16 1 E glutamate 10.3 27 3 F phenylalanine 5.0 13 1 G glycine 9.2 24 3 H histidine 2.3 6 2 I isoleucine 7.3 19 3 K lysine 4.2 11 2 L leucine 9.2 24 2 M methionine 5.0 13 1 N asparagine 4.6 12 1 P proline 3.8 10 2 Q glutamine 5.0 13 1 R arginine 5.4 14 1 S serine 6.9 18 2 T threonine 3.4 9 1 V valine 3.4 9 1 W tryptophan 0.8 2 1 Y tyrosine 1.5 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calneuron 1 isoform 1 CALN1 0.818 calneuron 1 isoform 2 CABP7 0.481 calcium binding protein 7 CABP1 0.136 calcium binding protein 1 isoform 3 CABP1 0.130 calcium binding protein 1 isoform 2 CABP1 0.130 calcium binding protein 1 isoform 1 CABP4 0.124 calcium binding protein 4 CABP5 0.124 calcium binding protein 5 CABP2 0.116 calcium binding protein 2 isoform 2 CABP2 0.114 calcium binding protein 2 isoform 1 CALM3 0.108 calmodulin 3 CALM2 0.108 calmodulin 2 CALM1 0.108 calmodulin 1 CALML3 0.106 calmodulin-like 3 TNNC2 0.094 fast skeletal muscle troponin C CETN2 0.090 caltractin CETN1 0.084 centrin 1 CALML5 0.078 calmodulin-like 5 TNNC1 0.068 troponin C, slow PVALB 0.058 parvalbumin LCP1 0.054 L-plastin PDCD6 0.054 programmed cell death 6 MYL6B 0.054 smooth muscle and non-muscle myosin alkali light chai... CALML6 0.052 calmodulin-like 6 CALML4 0.052 calmodulin-like 4 isoform 1 MYL12B 0.050 myosin regulatory light chain MRCL2 isoform B [Homo... CETN3 0.050 centrin 3 PLS3 0.050 plastin 3 PLS3 0.050 plastin 3 MYL12B 0.050 myosin regulatory light chain MRCL2 isoform A [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.