Guide to the Human Genome
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Name: FAM19A4 Sequence: fasta or formatted (140aa) NCBI GI: 32698882
Description:

family with sequence similarity 19 (chemokine (C-C motif)-like), member A4

Referenced in:

Additional Brain Proteins

Other entries for this name:
alt mRNA [140aa] family with sequence similarity 19 (chemokine (C-C motif)-like), ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7          8           1
 C cysteine            9.3         13           2
 D aspartate           1.4          2           1
 E glutamate           4.3          6           2
 F phenylalanine       1.4          2           1
 G glycine             5.7          8           1
 H histidine           5.0          7           2
 I isoleucine          2.9          4           1
 K lysine              7.1         10           1
 L leucine             6.4          9           2
 M methionine          3.6          5           1
 N asparagine          2.9          4           1
 P proline             3.6          5           1
 Q glutamine           5.0          7           1
 R arginine            6.4          9           1
 S serine             10.0         14           2
 T threonine           5.0          7           2
 V valine             10.0         14           2
 W tryptophan          2.9          4           2
 Y tyrosine            1.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   family with sequence similarity 19 (chemokine (C-C m... 
FAM19A4               1.000   family with sequence similarity 19 (chemokine (C-C m...
FAM19A2               0.591   family with sequence similarity 19 (chemokine (C-C m...
FAM19A3               0.552   family with sequence similarity 19 (chemokine (C-C m...
FAM19A1               0.527   family with sequence similarity 19 (chemokine (C-C m...
FAM19A5               0.276   family with sequence similarity 19 (chemokine (C-C m...
FAM19A5               0.272   family with sequence similarity 19 (chemokine (C-C ...
FAM19A3               0.251   family with sequence similarity 19 (chemokine (C-C m...
FBN3                  0.025   fibrillin 3 precursor 
CELSR3                0.025   cadherin EGF LAG seven-pass G-type receptor 3 [Homo...
AGRN                  0.025   agrin 
THBS2                 0.022   thrombospondin 2 precursor 
THBS3                 0.022   thrombospondin 3 precursor 
DMRTB1                0.018   DMRT-like family B with proline-rich C-terminal, 1 [...
LTBP2                 0.018   latent transforming growth factor beta binding protei...
TNXB                  0.018   tenascin XB isoform 1 precursor 
THBS1                 0.014   thrombospondin 1 precursor 
CRB2                  0.014   crumbs homolog 2 
LOC100132934          0.011   PREDICTED: similar to hCG1644233 
LOC100132934          0.011   PREDICTED: similar to hCG1644233 
JAG2                  0.011   jagged 2 isoform b precursor 
JAG2                  0.011   jagged 2 isoform a precursor 
NOTCH1                0.011   notch1 preproprotein 
CRB1                  0.011   crumbs homolog 1 precursor 
LTBP4                 0.011   latent transforming growth factor beta binding prot...
LTBP4                 0.011   latent transforming growth factor beta binding prot...
LTBP4                 0.011   latent transforming growth factor beta binding prot...
NOTCH3                0.011   Notch homolog 3 
LRP1B                 0.007   low density lipoprotein-related protein 1B precursor...
NOTCH4                0.007   notch4 preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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