Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 32698730
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32698730 nuclear fragile X mental retardation protein
interacting protein 2 [Homo sapiens]
(695 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32698730 nuclear fragile X mental retardation protein interac... 1414 0.0
gi|59938776 cAMP responsive element binding protein 5 isoform de... 62 2e-09
gi|59938774 cAMP responsive element binding protein 5 isoform be... 62 2e-09
gi|59938772 cAMP responsive element binding protein 5 isoform ga... 62 2e-09
gi|59938770 cAMP responsive element binding protein 5 isoform al... 62 2e-09
gi|61966923 forkhead box B2 [Homo sapiens] 58 3e-08
gi|4504489 histidine-rich glycoprotein precursor [Homo sapiens] 57 4e-08
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 55 2e-07
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 55 2e-07
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 55 2e-07
gi|20070107 orthodenticle homeobox 1 [Homo sapiens] 55 3e-07
gi|134288896 hypothetical protein LOC143684 [Homo sapiens] 54 4e-07
gi|148762982 hypothetical protein LOC387640 [Homo sapiens] 54 6e-07
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 53 8e-07
gi|83977459 pleckstrin homology-like domain, family A, member 1 ... 52 2e-06
gi|110347455 Brn3b POU domain transcription factor [Homo sapiens] 51 4e-06
gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens] 49 1e-05
gi|38787904 BMP-2 inducible kinase isoform b [Homo sapiens] 49 1e-05
gi|27894361 nuclear receptor subfamily 4, group A, member 3 isof... 49 1e-05
gi|27894359 nuclear receptor subfamily 4, group A, member 3 isof... 49 1e-05
gi|27894357 nuclear receptor subfamily 4, group A, member 3 isof... 49 1e-05
gi|27894355 nuclear receptor subfamily 4, group A, member 3 isof... 49 1e-05
gi|18765752 dual-specificity tyrosine-(Y)-phosphorylation regula... 49 2e-05
gi|18765758 dual-specificity tyrosine-(Y)-phosphorylation regula... 49 2e-05
gi|32307177 forkhead box G1 [Homo sapiens] 49 2e-05
gi|153252201 solute carrier family 39 (zinc transporter), member... 48 3e-05
gi|171460948 TSC22 domain family, member 1 isoform 1 [Homo sapiens] 48 3e-05
gi|84105335 mesenchyme homeobox 2 [Homo sapiens] 48 3e-05
gi|166064029 angiomotin isoform 1 [Homo sapiens] 48 3e-05
gi|23308699 transcription factor MAFB [Homo sapiens] 47 5e-05
>gi|32698730 nuclear fragile X mental retardation protein
interacting protein 2 [Homo sapiens]
Length = 695
Score = 1414 bits (3659), Expect = 0.0
Identities = 695/695 (100%), Positives = 695/695 (100%)
Query: 1 MEEKPGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQH 60
MEEKPGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQH
Sbjct: 1 MEEKPGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQH 60
Query: 61 GAEGSPKAQPKPLKHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLSSDEATNPI 120
GAEGSPKAQPKPLKHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLSSDEATNPI
Sbjct: 61 GAEGSPKAQPKPLKHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLSSDEATNPI 120
Query: 121 SRVLNGNQQVVDTSLKQTVKANTFGKAGIKTKNFIQKNSMDKKNGKSYENKSGENQSVDK 180
SRVLNGNQQVVDTSLKQTVKANTFGKAGIKTKNFIQKNSMDKKNGKSYENKSGENQSVDK
Sbjct: 121 SRVLNGNQQVVDTSLKQTVKANTFGKAGIKTKNFIQKNSMDKKNGKSYENKSGENQSVDK 180
Query: 181 SDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGCENLNIV 240
SDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGCENLNIV
Sbjct: 181 SDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGCENLNIV 240
Query: 241 QDKIMQQETSVPTLKQGLETFKPDYSEQKGNRVDGSKPIWKYETGPGGTSRGKPAVGDML 300
QDKIMQQETSVPTLKQGLETFKPDYSEQKGNRVDGSKPIWKYETGPGGTSRGKPAVGDML
Sbjct: 241 QDKIMQQETSVPTLKQGLETFKPDYSEQKGNRVDGSKPIWKYETGPGGTSRGKPAVGDML 300
Query: 301 RKSSDSKPGVSSKKFDDRPKGKHASAVASKEDSWTLFKPPPVFPVDNSSAKIVPKISYAS 360
RKSSDSKPGVSSKKFDDRPKGKHASAVASKEDSWTLFKPPPVFPVDNSSAKIVPKISYAS
Sbjct: 301 RKSSDSKPGVSSKKFDDRPKGKHASAVASKEDSWTLFKPPPVFPVDNSSAKIVPKISYAS 360
Query: 361 KVKENLNKTIQNSSVSPTSSSSSSSSTGETQTQSSSRLSQVPMSALKSVTSANFSNGPVL 420
KVKENLNKTIQNSSVSPTSSSSSSSSTGETQTQSSSRLSQVPMSALKSVTSANFSNGPVL
Sbjct: 361 KVKENLNKTIQNSSVSPTSSSSSSSSTGETQTQSSSRLSQVPMSALKSVTSANFSNGPVL 420
Query: 421 AGTDGNVYPPGGQPLLTTAANTLTPISSGTDSVLQDMSLTSAAVEQIKTSLFIYPSNMQT 480
AGTDGNVYPPGGQPLLTTAANTLTPISSGTDSVLQDMSLTSAAVEQIKTSLFIYPSNMQT
Sbjct: 421 AGTDGNVYPPGGQPLLTTAANTLTPISSGTDSVLQDMSLTSAAVEQIKTSLFIYPSNMQT 480
Query: 481 MLLSTAQVDLPSQTDQQNLGDIFQNQWGLSFINEPSAGPETVTGKSSEHKVMEVTFQGEY 540
MLLSTAQVDLPSQTDQQNLGDIFQNQWGLSFINEPSAGPETVTGKSSEHKVMEVTFQGEY
Sbjct: 481 MLLSTAQVDLPSQTDQQNLGDIFQNQWGLSFINEPSAGPETVTGKSSEHKVMEVTFQGEY 540
Query: 541 PATLVSQGAEIIPSGTEHPVFPKAYELEKRTSPQVLGSILKSGTTSESGALSLEPSHIGD 600
PATLVSQGAEIIPSGTEHPVFPKAYELEKRTSPQVLGSILKSGTTSESGALSLEPSHIGD
Sbjct: 541 PATLVSQGAEIIPSGTEHPVFPKAYELEKRTSPQVLGSILKSGTTSESGALSLEPSHIGD 600
Query: 601 LQKADTSSQGALVFLSKDYEIESQNPLASPTNTLLGSAKEQRYQRGLERNDSWGSFDLRA 660
LQKADTSSQGALVFLSKDYEIESQNPLASPTNTLLGSAKEQRYQRGLERNDSWGSFDLRA
Sbjct: 601 LQKADTSSQGALVFLSKDYEIESQNPLASPTNTLLGSAKEQRYQRGLERNDSWGSFDLRA 660
Query: 661 AIVYHTKEMESIWNLQKQDPKRIITYNEAMDSPDQ 695
AIVYHTKEMESIWNLQKQDPKRIITYNEAMDSPDQ
Sbjct: 661 AIVYHTKEMESIWNLQKQDPKRIITYNEAMDSPDQ 695
>gi|59938776 cAMP responsive element binding protein 5 isoform delta
[Homo sapiens]
Length = 369
Score = 61.6 bits (148), Expect = 2e-09
Identities = 34/85 (40%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 5 PGQPQP-QHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQ-QPHQYLQHGA 62
P P P QH H HHPH P QQ PHHH +HSH H H HHQ PH L G
Sbjct: 147 PHHPYPHQHQHPAHHPHPQPHHQQNHPHHH------SHSHLHAHPAHHQTSPHPPLHTGN 200
Query: 63 EGSPKAQPKPLKHEQKHTLQQHQET 87
+ + P + + T+Q Q T
Sbjct: 201 QA--QVSPATQQMQPTQTIQPPQPT 223
Score = 58.9 bits (141), Expect = 2e-08
Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 16/89 (17%)
Query: 7 QPQPQHHHSHHHPH-------HHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQ 59
Q Q HHH H HPH HHP Q Q HH + +H NH HHH H H +
Sbjct: 127 QDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPA 186
Query: 60 HGAEGSPKAQPKPLKHEQKHTLQQHQETP 88
H + SP H HT Q Q +P
Sbjct: 187 H-HQTSP--------HPPLHTGNQAQVSP 206
Score = 52.4 bits (124), Expect = 1e-06
Identities = 42/167 (25%), Positives = 59/167 (35%), Gaps = 22/167 (13%)
Query: 1 MEEKPGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQH 60
M E G Q Q H H H H H Q Q PHH Y H H H HH H QPH H
Sbjct: 119 MMEMMGSRQDQTPHHHMHSHPH-QHQTLPPHHP-----YPHQHQHPAHHPHPQPHHQQNH 172
Query: 61 GAEGSPKAQPKPLKHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLSSDEATNPI 120
P H H H +T + GN + + + + + P
Sbjct: 173 ---------PHHHSHSHLHAHPAHHQTSPHPPLH---TGNQAQVSPATQQMQPTQTIQPP 220
Query: 121 SRVLNGNQQVVDTS----LKQTVKANTFGKAGIKTKNFIQKNSMDKK 163
++VVD ++ ++ N + K + S++KK
Sbjct: 221 QPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKK 267
>gi|59938774 cAMP responsive element binding protein 5 isoform beta
[Homo sapiens]
Length = 501
Score = 61.6 bits (148), Expect = 2e-09
Identities = 34/85 (40%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 5 PGQPQP-QHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQ-QPHQYLQHGA 62
P P P QH H HHPH P QQ PHHH +HSH H H HHQ PH L G
Sbjct: 279 PHHPYPHQHQHPAHHPHPQPHHQQNHPHHH------SHSHLHAHPAHHQTSPHPPLHTGN 332
Query: 63 EGSPKAQPKPLKHEQKHTLQQHQET 87
+ + P + + T+Q Q T
Sbjct: 333 QA--QVSPATQQMQPTQTIQPPQPT 355
Score = 58.9 bits (141), Expect = 2e-08
Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 16/89 (17%)
Query: 7 QPQPQHHHSHHHPH-------HHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQ 59
Q Q HHH H HPH HHP Q Q HH + +H NH HHH H H +
Sbjct: 259 QDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPA 318
Query: 60 HGAEGSPKAQPKPLKHEQKHTLQQHQETP 88
H + SP H HT Q Q +P
Sbjct: 319 H-HQTSP--------HPPLHTGNQAQVSP 338
Score = 52.4 bits (124), Expect = 1e-06
Identities = 42/167 (25%), Positives = 59/167 (35%), Gaps = 22/167 (13%)
Query: 1 MEEKPGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQH 60
M E G Q Q H H H H H Q Q PHH Y H H H HH H QPH H
Sbjct: 251 MMEMMGSRQDQTPHHHMHSHPH-QHQTLPPHHP-----YPHQHQHPAHHPHPQPHHQQNH 304
Query: 61 GAEGSPKAQPKPLKHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLSSDEATNPI 120
P H H H +T + GN + + + + + P
Sbjct: 305 ---------PHHHSHSHLHAHPAHHQTSPHPPLH---TGNQAQVSPATQQMQPTQTIQPP 352
Query: 121 SRVLNGNQQVVDTS----LKQTVKANTFGKAGIKTKNFIQKNSMDKK 163
++VVD ++ ++ N + K + S++KK
Sbjct: 353 QPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKK 399
>gi|59938772 cAMP responsive element binding protein 5 isoform gamma
[Homo sapiens]
Length = 475
Score = 61.6 bits (148), Expect = 2e-09
Identities = 34/85 (40%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 5 PGQPQP-QHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQ-QPHQYLQHGA 62
P P P QH H HHPH P QQ PHHH +HSH H H HHQ PH L G
Sbjct: 253 PHHPYPHQHQHPAHHPHPQPHHQQNHPHHH------SHSHLHAHPAHHQTSPHPPLHTGN 306
Query: 63 EGSPKAQPKPLKHEQKHTLQQHQET 87
+ + P + + T+Q Q T
Sbjct: 307 QA--QVSPATQQMQPTQTIQPPQPT 329
Score = 58.9 bits (141), Expect = 2e-08
Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 16/89 (17%)
Query: 7 QPQPQHHHSHHHPH-------HHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQ 59
Q Q HHH H HPH HHP Q Q HH + +H NH HHH H H +
Sbjct: 233 QDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPA 292
Query: 60 HGAEGSPKAQPKPLKHEQKHTLQQHQETP 88
H + SP H HT Q Q +P
Sbjct: 293 H-HQTSP--------HPPLHTGNQAQVSP 312
Score = 52.4 bits (124), Expect = 1e-06
Identities = 42/167 (25%), Positives = 59/167 (35%), Gaps = 22/167 (13%)
Query: 1 MEEKPGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQH 60
M E G Q Q H H H H H Q Q PHH Y H H H HH H QPH H
Sbjct: 225 MMEMMGSRQDQTPHHHMHSHPH-QHQTLPPHHP-----YPHQHQHPAHHPHPQPHHQQNH 278
Query: 61 GAEGSPKAQPKPLKHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLSSDEATNPI 120
P H H H +T + GN + + + + + P
Sbjct: 279 ---------PHHHSHSHLHAHPAHHQTSPHPPLH---TGNQAQVSPATQQMQPTQTIQPP 326
Query: 121 SRVLNGNQQVVDTS----LKQTVKANTFGKAGIKTKNFIQKNSMDKK 163
++VVD ++ ++ N + K + S++KK
Sbjct: 327 QPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKK 373
>gi|59938770 cAMP responsive element binding protein 5 isoform alpha
[Homo sapiens]
Length = 508
Score = 61.6 bits (148), Expect = 2e-09
Identities = 34/85 (40%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 5 PGQPQP-QHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQ-QPHQYLQHGA 62
P P P QH H HHPH P QQ PHHH +HSH H H HHQ PH L G
Sbjct: 286 PHHPYPHQHQHPAHHPHPQPHHQQNHPHHH------SHSHLHAHPAHHQTSPHPPLHTGN 339
Query: 63 EGSPKAQPKPLKHEQKHTLQQHQET 87
+ + P + + T+Q Q T
Sbjct: 340 QA--QVSPATQQMQPTQTIQPPQPT 362
Score = 58.9 bits (141), Expect = 2e-08
Identities = 33/89 (37%), Positives = 38/89 (42%), Gaps = 16/89 (17%)
Query: 7 QPQPQHHHSHHHPH-------HHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQ 59
Q Q HHH H HPH HHP Q Q HH + +H NH HHH H H +
Sbjct: 266 QDQTPHHHMHSHPHQHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNHPHHHSHSHLHAHPA 325
Query: 60 HGAEGSPKAQPKPLKHEQKHTLQQHQETP 88
H + SP H HT Q Q +P
Sbjct: 326 H-HQTSP--------HPPLHTGNQAQVSP 345
Score = 52.4 bits (124), Expect = 1e-06
Identities = 42/167 (25%), Positives = 59/167 (35%), Gaps = 22/167 (13%)
Query: 1 MEEKPGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQH 60
M E G Q Q H H H H H Q Q PHH Y H H H HH H QPH H
Sbjct: 258 MMEMMGSRQDQTPHHHMHSHPH-QHQTLPPHHP-----YPHQHQHPAHHPHPQPHHQQNH 311
Query: 61 GAEGSPKAQPKPLKHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLSSDEATNPI 120
P H H H +T + GN + + + + + P
Sbjct: 312 ---------PHHHSHSHLHAHPAHHQTSPHPPLH---TGNQAQVSPATQQMQPTQTIQPP 359
Query: 121 SRVLNGNQQVVDTS----LKQTVKANTFGKAGIKTKNFIQKNSMDKK 163
++VVD ++ ++ N + K + S++KK
Sbjct: 360 QPTGGRRRRVVDEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKK 406
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 57.8 bits (138), Expect = 3e-08
Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 23/103 (22%)
Query: 5 PGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHH--------QQPHQ 56
PG H H HHH H PHHHHH+ H+ HHHHHHH P
Sbjct: 128 PGAGPGGHLHPHHHHH---------PHHHHHH----HAAAHHHHHHHPPQPPPPPPPPPP 174
Query: 57 YLQHGAEGSPKAQPKPLKHEQKHTLQQ--HQETPKKKTGYGEL 97
++ H P P+P H QQ Q P++ + G++
Sbjct: 175 HMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQPQQPSHPGKM 217
>gi|4504489 histidine-rich glycoprotein precursor [Homo sapiens]
Length = 525
Score = 57.4 bits (137), Expect = 4e-08
Identities = 33/92 (35%), Positives = 39/92 (42%), Gaps = 20/92 (21%)
Query: 10 PQHHHSHH-HPH------HHPQQ---QQQQPHHHH---HYYFYNHSHNHHHHHHHQQPHQ 56
P HHSH HPH HHP + +Q PH HH H+ +H H HH H HH H
Sbjct: 351 PHKHHSHEQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHCHD 410
Query: 57 YLQHGAEGSPKAQPKPLKHEQKHTLQQHQETP 88
+ +G P P H Q H H P
Sbjct: 411 FQDYG-----PCDPPP--HNQGHCCHGHGPPP 435
Score = 36.2 bits (82), Expect = 0.11
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Query: 11 QHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHG 61
+H H+++ HP + HH H + + H H H HH H H+ HG
Sbjct: 339 RHSHNNNSSDLHPHK-----HHSHEQHPHGH-HPHAHHPHEHDTHRQHPHG 383
Score = 32.7 bits (73), Expect = 1.2
Identities = 23/89 (25%), Positives = 27/89 (30%), Gaps = 32/89 (35%)
Query: 4 KPGQPQPQHHHSHHHPHHHPQQQQQQPHHH-------------------HHYYF-----Y 39
KP + HH H H P ++ H H H F
Sbjct: 279 KPHGSRDHHHPHKPHEHGPPPPPDERDHSHGPPLPQGPPPLLPMSCSSCQHATFGTNGAQ 338
Query: 40 NHSHN--------HHHHHHHQQPHQYLQH 60
HSHN H HH H Q PH + H
Sbjct: 339 RHSHNNNSSDLHPHKHHSHEQHPHGHHPH 367
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 55.5 bits (132), Expect = 2e-07
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 23/82 (28%)
Query: 3 EKPGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGA 62
E P P Q HH HHH HHH HHH H H HHHH QQ +Q+ Q
Sbjct: 16 EAPAAPPHQQHHHHHHAHHH--------HHHAH-------HLHHHHALQQQLNQFQQQ-- 58
Query: 63 EGSPKAQPKPLKHEQKHTLQQH 84
Q + + +Q+ QQH
Sbjct: 59 ------QQQQQQQQQQQQQQQH 74
Score = 42.7 bits (99), Expect = 0.001
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Query: 30 PHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQPKPLKHEQKHTLQQHQETPK 89
PH HH H+HH HHHH H H A Q + + +Q+ QQ Q+
Sbjct: 22 PHQQHH-------HHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQH 74
Query: 90 KKTGYGELNGNAG 102
+ L G G
Sbjct: 75 PISNNNSLGGAGG 87
Score = 36.6 bits (83), Expect = 0.081
Identities = 19/68 (27%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Query: 12 HHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQPK 71
HHH+HH HHH QQQ H + L G+P QP
Sbjct: 36 HHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAP--QPG 93
Query: 72 PLKHEQKH 79
P + +H
Sbjct: 94 PDMEQPQH 101
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 55.5 bits (132), Expect = 2e-07
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 23/82 (28%)
Query: 3 EKPGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGA 62
E P P Q HH HHH HHH HHH H H HHHH QQ +Q+ Q
Sbjct: 16 EAPAAPPHQQHHHHHHAHHH--------HHHAH-------HLHHHHALQQQLNQFQQQ-- 58
Query: 63 EGSPKAQPKPLKHEQKHTLQQH 84
Q + + +Q+ QQH
Sbjct: 59 ------QQQQQQQQQQQQQQQH 74
Score = 42.7 bits (99), Expect = 0.001
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Query: 30 PHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQPKPLKHEQKHTLQQHQETPK 89
PH HH H+HH HHHH H H A Q + + +Q+ QQ Q+
Sbjct: 22 PHQQHH-------HHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQH 74
Query: 90 KKTGYGELNGNAG 102
+ L G G
Sbjct: 75 PISNNNSLGGAGG 87
Score = 36.6 bits (83), Expect = 0.081
Identities = 19/68 (27%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Query: 12 HHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQPK 71
HHH+HH HHH QQQ H + L G+P QP
Sbjct: 36 HHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAP--QPG 93
Query: 72 PLKHEQKH 79
P + +H
Sbjct: 94 PDMEQPQH 101
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 55.5 bits (132), Expect = 2e-07
Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 23/82 (28%)
Query: 3 EKPGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGA 62
E P P Q HH HHH HHH HHH H H HHHH QQ +Q+ Q
Sbjct: 16 EAPAAPPHQQHHHHHHAHHH--------HHHAH-------HLHHHHALQQQLNQFQQQ-- 58
Query: 63 EGSPKAQPKPLKHEQKHTLQQH 84
Q + + +Q+ QQH
Sbjct: 59 ------QQQQQQQQQQQQQQQH 74
Score = 42.7 bits (99), Expect = 0.001
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Query: 30 PHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQPKPLKHEQKHTLQQHQETPK 89
PH HH H+HH HHHH H H A Q + + +Q+ QQ Q+
Sbjct: 22 PHQQHH-------HHHHAHHHHHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQH 74
Query: 90 KKTGYGELNGNAG 102
+ L G G
Sbjct: 75 PISNNNSLGGAGG 87
Score = 36.6 bits (83), Expect = 0.081
Identities = 19/68 (27%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Query: 12 HHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQPK 71
HHH+HH HHH QQQ H + L G+P QP
Sbjct: 36 HHHAHHLHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQHPISNNNSLGGAGGGAP--QPG 93
Query: 72 PLKHEQKH 79
P + +H
Sbjct: 94 PDMEQPQH 101
>gi|20070107 orthodenticle homeobox 1 [Homo sapiens]
Length = 354
Score = 54.7 bits (130), Expect = 3e-07
Identities = 22/47 (46%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Query: 14 HSHHHPHH-HPQQQQQQPHHHHHYYFYNH------SHNHHHHHHHQQ 53
HSHHHPH P HHHH+ +H H+HHHHHHH Q
Sbjct: 256 HSHHHPHQLSPMAPSSMAGHHHHHPHAHHPLSQSSGHHHHHHHHHHQ 302
Score = 50.1 bits (118), Expect = 7e-06
Identities = 21/48 (43%), Positives = 21/48 (43%), Gaps = 11/48 (22%)
Query: 5 PGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQ 52
P P H HHHPH H Q HHH HHHHHHHQ
Sbjct: 266 PMAPSSMAGHHHHHPHAHHPLSQSSGHHH-----------HHHHHHHQ 302
>gi|134288896 hypothetical protein LOC143684 [Homo sapiens]
Length = 339
Score = 54.3 bits (129), Expect = 4e-07
Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 35/184 (19%)
Query: 14 HSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQPKPL 73
HS+ ++ Q P HHHH+ HHHHH H H + + SP+ +
Sbjct: 153 HSNSSSSSLTEKDQHHPKHHHHH--------HHHHHRHSSSHHKI---SNLSPEEEQGLW 201
Query: 74 KHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLSSD--------------EATNP 119
K K + ETPKKK +L + S N S+D E
Sbjct: 202 KQSHKSSATIQNETPKKKP---KLESKPSNGDSSSINQSADSGGTDNFVLISQLKEEVMS 258
Query: 120 ISRVLNGNQQVV---DTSLKQTVKANTFGKAGIKTKNFIQKNSMDKKNGKSYENKSGENQ 176
+ R+L Q + D L + + ++ ++TK NSM+K + ++ E +N+
Sbjct: 259 LKRLLQQRDQTILEKDKKLTELKADFQYQESNLRTK----MNSMEKAHKETVEQLQAKNR 314
Query: 177 SVDK 180
+ K
Sbjct: 315 ELLK 318
>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
Length = 908
Score = 53.5 bits (127), Expect = 6e-07
Identities = 35/144 (24%), Positives = 51/144 (35%), Gaps = 27/144 (18%)
Query: 8 PQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPH------------ 55
P P HHH HHH HHH + Q P H H HHH QPH
Sbjct: 334 PPPHHHHHHHHHHHHHHHRAQPPQQSH----------HPPHHHRPQPHLGSFPESCSSDS 383
Query: 56 ---QYLQHGAEGSPKAQPKPLKHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLS 112
Y H A S + ++ +E +++ E G+ + +
Sbjct: 384 ESSSYSDHAANDSDFGSSLSSSSNSVSSEEEEEEGEEEEEEEEEEGGSGASDSSEVSSEE 443
Query: 113 SDEATNPISRVLNGNQQVVDTSLK 136
D +T S +G+ QV S++
Sbjct: 444 EDSSTESDSS--SGSSQVSVQSIR 465
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 53.1 bits (126), Expect = 8e-07
Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 22/117 (18%)
Query: 3 EKPGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQP-------- 54
++P Q P H H P H P Q Q P H + H H+HHHHH P
Sbjct: 595 QQPQQQPPPQHQPPHQPPHQPPPQHQPPPQHPPQHPPQHQHHHHHHHLSVPPPPLMPMSQ 654
Query: 55 HQYLQHGAEGSPKA--------QPKPLKHE------QKHTLQQHQETPKKKTGYGEL 97
Q+ H P+A Q + L+H K +QQ Q T + + EL
Sbjct: 655 PQFRPHVQTAQPQASSSRMQCPQRQGLRHNTTSQNVSKRPMQQMQPTAPRNSNLREL 711
>gi|83977459 pleckstrin homology-like domain, family A, member 1
[Homo sapiens]
Length = 401
Score = 52.0 bits (123), Expect = 2e-06
Identities = 27/73 (36%), Positives = 32/73 (43%), Gaps = 11/73 (15%)
Query: 7 QPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSP 66
QPQPQ P PQ QQ P+ H H + ++H H+H H H H PHQ
Sbjct: 328 QPQPQSQ-PQPQPQPKPQPQQLHPYPHPHPHPHSHPHSHPHPHPHPHPHQI--------- 377
Query: 67 KAQPKPLKHEQKH 79
P P H Q H
Sbjct: 378 -PHPHPQPHSQPH 389
>gi|110347455 Brn3b POU domain transcription factor [Homo sapiens]
Length = 409
Score = 50.8 bits (120), Expect = 4e-06
Identities = 25/69 (36%), Positives = 28/69 (40%), Gaps = 19/69 (27%)
Query: 9 QPQHHHSHHHPHHHP------------------QQQQQQPHHHHHYYFYNHSHNHHHHHH 50
Q + HH HH PHH P P H H H+HHHHHH
Sbjct: 122 QSKSHH-HHPPHHSPFKPDATYHTMNTIPCTSAASSSSVPISHPSALAGTHHHHHHHHHH 180
Query: 51 HQQPHQYLQ 59
H QPHQ L+
Sbjct: 181 HHQPHQALE 189
>gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens]
Length = 1161
Score = 49.3 bits (116), Expect = 1e-05
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Query: 11 QHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYL---QHGAEGSPK 67
QH H H QQQQQQ +HHHHHHH Y+ QH +
Sbjct: 454 QHRHPHQQQQQQQQQQQQQQQQQQQQQQQQQQQHHHHHHHHLLQDAYMQQYQHATQQQQM 513
Query: 68 AQPKPLKH 75
Q + L H
Sbjct: 514 LQQQFLMH 521
Score = 47.8 bits (112), Expect = 3e-05
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 7 QPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQ----PHQYLQHGA 62
Q Q Q QQQQQQ HHHHH++ ++ + H QQ Q+L H
Sbjct: 464 QQQQQQQQQQQQQQQQQQQQQQQHHHHHHHHLLQDAYMQQYQHATQQQQMLQQQFLMHSV 523
Query: 63 EGSPKAQPKPLKHEQKHTLQQHQE 86
QP+P + + Q+Q+
Sbjct: 524 -----YQPQPSASQYPTMMPQYQQ 542
>gi|38787904 BMP-2 inducible kinase isoform b [Homo sapiens]
Length = 662
Score = 49.3 bits (116), Expect = 1e-05
Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Query: 11 QHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYL---QHGAEGSPK 67
QH H H QQQQQQ +HHHHHHH Y+ QH +
Sbjct: 454 QHRHPHQQQQQQQQQQQQQQQQQQQQQQQQQQQHHHHHHHHLLQDAYMQQYQHATQQQQM 513
Query: 68 AQPKPLKH 75
Q + L H
Sbjct: 514 LQQQFLMH 521
Score = 47.8 bits (112), Expect = 3e-05
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 7 QPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQ----PHQYLQHGA 62
Q Q Q QQQQQQ HHHHH++ ++ + H QQ Q+L H
Sbjct: 464 QQQQQQQQQQQQQQQQQQQQQQQHHHHHHHHLLQDAYMQQYQHATQQQQMLQQQFLMHSV 523
Query: 63 EGSPKAQPKPLKHEQKHTLQQHQE 86
QP+P + + Q+Q+
Sbjct: 524 -----YQPQPSASQYPTMMPQYQQ 542
>gi|27894361 nuclear receptor subfamily 4, group A, member 3 isoform
b [Homo sapiens]
Length = 637
Score = 49.3 bits (116), Expect = 1e-05
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 25 QQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQPKP 72
++ + P +HHH H H+HHHHHHHQQ HQ SP+ + P
Sbjct: 98 EEGRAPSYHHH-----HHHHHHHHHHHQQQHQQPSIPPASSPEDEVLP 140
Score = 43.5 bits (101), Expect = 7e-04
Identities = 17/30 (56%), Positives = 18/30 (60%)
Query: 1 MEEKPGQPQPQHHHSHHHPHHHPQQQQQQP 30
+EE HHH HHH HHH QQQ QQP
Sbjct: 97 VEEGRAPSYHHHHHHHHHHHHHHQQQHQQP 126
>gi|27894359 nuclear receptor subfamily 4, group A, member 3 isoform
c [Homo sapiens]
Length = 443
Score = 49.3 bits (116), Expect = 1e-05
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 25 QQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQPKP 72
++ + P +HHH H H+HHHHHHHQQ HQ SP+ + P
Sbjct: 87 EEGRAPSYHHH-----HHHHHHHHHHHQQQHQQPSIPPASSPEDEVLP 129
Score = 43.5 bits (101), Expect = 7e-04
Identities = 17/30 (56%), Positives = 18/30 (60%)
Query: 1 MEEKPGQPQPQHHHSHHHPHHHPQQQQQQP 30
+EE HHH HHH HHH QQQ QQP
Sbjct: 86 VEEGRAPSYHHHHHHHHHHHHHHQQQHQQP 115
>gi|27894357 nuclear receptor subfamily 4, group A, member 3 isoform
a [Homo sapiens]
Length = 626
Score = 49.3 bits (116), Expect = 1e-05
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 25 QQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQPKP 72
++ + P +HHH H H+HHHHHHHQQ HQ SP+ + P
Sbjct: 87 EEGRAPSYHHH-----HHHHHHHHHHHQQQHQQPSIPPASSPEDEVLP 129
Score = 43.5 bits (101), Expect = 7e-04
Identities = 17/30 (56%), Positives = 18/30 (60%)
Query: 1 MEEKPGQPQPQHHHSHHHPHHHPQQQQQQP 30
+EE HHH HHH HHH QQQ QQP
Sbjct: 86 VEEGRAPSYHHHHHHHHHHHHHHQQQHQQP 115
>gi|27894355 nuclear receptor subfamily 4, group A, member 3 isoform
a [Homo sapiens]
Length = 626
Score = 49.3 bits (116), Expect = 1e-05
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 25 QQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQPKP 72
++ + P +HHH H H+HHHHHHHQQ HQ SP+ + P
Sbjct: 87 EEGRAPSYHHH-----HHHHHHHHHHHQQQHQQPSIPPASSPEDEVLP 129
Score = 43.5 bits (101), Expect = 7e-04
Identities = 17/30 (56%), Positives = 18/30 (60%)
Query: 1 MEEKPGQPQPQHHHSHHHPHHHPQQQQQQP 30
+EE HHH HHH HHH QQQ QQP
Sbjct: 86 VEEGRAPSYHHHHHHHHHHHHHHQQQHQQP 115
>gi|18765752 dual-specificity tyrosine-(Y)-phosphorylation regulated
kinase 1A isoform 2 [Homo sapiens]
Length = 754
Score = 48.9 bits (115), Expect = 2e-05
Identities = 54/196 (27%), Positives = 72/196 (36%), Gaps = 42/196 (21%)
Query: 22 HPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQPKPLKHEQKHTL 81
H QQ HHHH ++H H+HHHHHHH Q Q L G P+ P
Sbjct: 581 HVAPQQNALHHHHGNSSHHHHHHHHHHHHHGQ--QAL--GNRTRPRVYNSPTNSSSTQDS 636
Query: 82 QQHQETPKKKTGYGELNGNAGEREISLKNLSSDEATNPISRVLNGNQQVVDTSLKQTVKA 141
+ G S+ +LSS ++ S GNQ + V A
Sbjct: 637 ME-----------------VGHSHHSMTSLSSSTTSSSTSSSSTGNQG-NQAYQNRPVAA 678
Query: 142 NTFGKAGIKTKNFIQKNSMDKKNGKSYENKSGENQSVDKSDTIPIPNGVVTNNSG---YI 198
NT +F Q +MD N Y N E P + N+G Y+
Sbjct: 679 NTL--------DFGQNGAMD-VNLTVYSNPRQETGIAGH------PTYQFSANTGPAHYM 723
Query: 199 TNGY--MGKGADNDGS 212
T G+ M +GAD + S
Sbjct: 724 TEGHLTMRQGADREES 739
>gi|18765758 dual-specificity tyrosine-(Y)-phosphorylation regulated
kinase 1A isoform 1 [Homo sapiens]
Length = 763
Score = 48.9 bits (115), Expect = 2e-05
Identities = 54/196 (27%), Positives = 72/196 (36%), Gaps = 42/196 (21%)
Query: 22 HPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQPKPLKHEQKHTL 81
H QQ HHHH ++H H+HHHHHHH Q Q L G P+ P
Sbjct: 590 HVAPQQNALHHHHGNSSHHHHHHHHHHHHHGQ--QAL--GNRTRPRVYNSPTNSSSTQDS 645
Query: 82 QQHQETPKKKTGYGELNGNAGEREISLKNLSSDEATNPISRVLNGNQQVVDTSLKQTVKA 141
+ G S+ +LSS ++ S GNQ + V A
Sbjct: 646 ME-----------------VGHSHHSMTSLSSSTTSSSTSSSSTGNQG-NQAYQNRPVAA 687
Query: 142 NTFGKAGIKTKNFIQKNSMDKKNGKSYENKSGENQSVDKSDTIPIPNGVVTNNSG---YI 198
NT +F Q +MD N Y N E P + N+G Y+
Sbjct: 688 NTL--------DFGQNGAMD-VNLTVYSNPRQETGIAGH------PTYQFSANTGPAHYM 732
Query: 199 TNGY--MGKGADNDGS 212
T G+ M +GAD + S
Sbjct: 733 TEGHLTMRQGADREES 748
>gi|32307177 forkhead box G1 [Homo sapiens]
Length = 489
Score = 48.9 bits (115), Expect = 2e-05
Identities = 27/68 (39%), Positives = 29/68 (42%), Gaps = 28/68 (41%)
Query: 12 HHHSH-HHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQP 70
HH SH HH HHPQ HHHH HHHHHHH P P QP
Sbjct: 33 HHASHGHHNSHHPQ------HHHH----------HHHHHHHPPP-----------PAPQP 65
Query: 71 KPLKHEQK 78
P +Q+
Sbjct: 66 PPPPQQQQ 73
Score = 41.2 bits (95), Expect = 0.003
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 10 PQHHHSHHHPHHHPQQQQQQP 30
PQHHH HHH HHHP QP
Sbjct: 45 PQHHHHHHHHHHHPPPPAPQP 65
Score = 30.4 bits (67), Expect = 5.8
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 5/29 (17%)
Query: 7 QPQPQHHHSHHH-----PHHHPQQQQQQP 30
Q HHH HHH P P QQQQP
Sbjct: 46 QHHHHHHHHHHHPPPPAPQPPPPPQQQQP 74
>gi|153252201 solute carrier family 39 (zinc transporter), member 6
isoform 1 [Homo sapiens]
Length = 755
Score = 48.1 bits (113), Expect = 3e-05
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 15/124 (12%)
Query: 12 HHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEGSPKAQPK 71
H H HH H H ++ H HH +HS + HH HH+ H A G K +
Sbjct: 94 HDHDHHSDHEHHSDHERHSDHEHHSDHEHHSDHDHHSHHN--------HAASGKNKRKAL 145
Query: 72 PLKHEQKHTLQQHQETPKKKTGYGELNGN--AGEREISLKNLSSDEATNPISRVLNGNQQ 129
H+ + P+ G G +G R + ++S+ E T+ + ++
Sbjct: 146 CPDHDS----DSSGKDPRNSQGKGAHRPEHASGRRNVK-DSVSASEVTSTVYNTVSEGTH 200
Query: 130 VVDT 133
++T
Sbjct: 201 FLET 204
Score = 43.5 bits (101), Expect = 7e-04
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 8 PQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQY 57
P+ + H H H Q HHHH Y+ H H+H +HH H +Y
Sbjct: 533 PRGCKNKCHSHFHDTLGQSDDLIHHHHDYHHILHHHHHQNHHPHSHSQRY 582
Score = 42.0 bits (97), Expect = 0.002
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 13 HHSHHHPH-----HHPQQQQQQPHHHHHYYFYNHSHNHHHHHHH 51
H H H H HH ++ H HH + ++ H+HH HH+H
Sbjct: 91 HIHHDHDHHSDHEHHSDHERHSDHEHHSDHEHHSDHDHHSHHNH 134
Score = 31.6 bits (70), Expect = 2.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 12 HHHSHHHPHHHPQQQQQQ 29
HHH +HHPH H Q+ ++
Sbjct: 568 HHHQNHHPHSHSQRYSRE 585
>gi|171460948 TSC22 domain family, member 1 isoform 1 [Homo sapiens]
Length = 1073
Score = 48.1 bits (113), Expect = 3e-05
Identities = 42/162 (25%), Positives = 58/162 (35%), Gaps = 14/162 (8%)
Query: 3 EKPGQPQP-QHHHSHHHPHHHPQQQ-----QQQPHHHHHYYFYNHSHNHHHHHHHQQPHQ 56
E PG P Q H H H PQQ PHH HH++ +H H+ H HHH
Sbjct: 184 ETPGAVSPNQPHLPQPHLPHLPQQNVVINGNAHPHHLHHHHQIHHGHHLQHGHHHPSHVA 243
Query: 57 YLQHGAEGSPKAQPKPLKHEQKHTLQQHQETPKKKTGYGELNGNAGEREISLKNLSSD-- 114
G P + P+ + T TP T +G+ +++ S+
Sbjct: 244 VASASITGGPPS--SPVSRKLSTTGSSDSITPVAPTSAVSSSGSPASVMTNMRAPSTTGG 301
Query: 115 ---EATNPISRVLNGNQQVVDTSLKQTVKANTFGKAGIKTKN 153
+ S V N N V S V ++ G I T N
Sbjct: 302 IGINSVTGTSTVNNVNITAVG-SFNPNVTSSMLGNVNISTSN 342
>gi|84105335 mesenchyme homeobox 2 [Homo sapiens]
Length = 304
Score = 47.8 bits (112), Expect = 3e-05
Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 7/34 (20%)
Query: 26 QQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQ 59
Q + HHHHH H+HHHHHH QQ HQ LQ
Sbjct: 63 QHHRGHHHHH-------HHHHHHHHQQQQHQALQ 89
Score = 40.4 bits (93), Expect = 0.006
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Query: 22 HPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGA 62
+P ++ HH H+HHHHHHH HQ QH A
Sbjct: 53 YPNEEGMFASQHHR------GHHHHHHHHHHHHHQQQQHQA 87
Score = 40.0 bits (92), Expect = 0.007
Identities = 14/18 (77%), Positives = 14/18 (77%)
Query: 12 HHHSHHHPHHHPQQQQQQ 29
HHH HHH HHH QQQQ Q
Sbjct: 69 HHHHHHHHHHHHQQQQHQ 86
Score = 38.9 bits (89), Expect = 0.016
Identities = 14/24 (58%), Positives = 15/24 (62%)
Query: 12 HHHSHHHPHHHPQQQQQQPHHHHH 35
HHH HHH HHH QQQ Q + H
Sbjct: 70 HHHHHHHHHHHQQQQHQALQTNWH 93
Score = 38.1 bits (87), Expect = 0.028
Identities = 13/17 (76%), Positives = 13/17 (76%)
Query: 12 HHHSHHHPHHHPQQQQQ 28
HHH HHH HHH QQQQ
Sbjct: 68 HHHHHHHHHHHHHQQQQ 84
Score = 35.0 bits (79), Expect = 0.23
Identities = 12/17 (70%), Positives = 12/17 (70%)
Query: 13 HHSHHHPHHHPQQQQQQ 29
HH HHH HHH QQQQ
Sbjct: 68 HHHHHHHHHHHHHQQQQ 84
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 47.8 bits (112), Expect = 3e-05
Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Query: 5 PGQPQPQHHHSHHHPHHHPQQQQQQPHHHHHYYFYNHSHNHHHHHHHQQPHQYLQHGAEG 64
P Q H+ P QQQQQQ HHHH+ HH QQP Q
Sbjct: 358 PNQAHQGDHYRLSQPGLSQQQQQQQQQHHHHH--------HHQQQQQQQPQQQPGEAYSA 409
Query: 65 SPKAQPKPLKHE 76
P+AQP ++
Sbjct: 410 MPRAQPSSASYQ 421
Score = 41.6 bits (96), Expect = 0.003
Identities = 18/29 (62%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 4 KPG--QPQPQHHHSHHHPHHHPQQQQQQP 30
+PG Q Q Q HHH HHH QQQQQQP
Sbjct: 371 QPGLSQQQQQQQQQHHHHHHHQQQQQQQP 399
Score = 39.7 bits (91), Expect = 0.010
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 1 MEEKPGQPQPQHHHSHHHPHHHPQQQQQQP 30
+ ++ Q Q QHHH HHH QQ QQQP
Sbjct: 374 LSQQQQQQQQQHHHHHHHQQQQQQQPQQQP 403
>gi|23308699 transcription factor MAFB [Homo sapiens]
Length = 323
Score = 47.4 bits (111), Expect = 5e-05
Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 15/81 (18%)
Query: 4 KPGQPQPQHHHSHHHPHHHPQQQQQQPHHHH--------HYYFYNHSHNHHHHHHH-QQP 54
+P Q +HHH HHH PH HH H H+H HHHHHH P
Sbjct: 119 QPLQSFDSFRGAHHHHHHH------HPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPP 172
Query: 55 HQYLQHGAEGSPKAQPKPLKH 75
A+ P + P P H
Sbjct: 173 PSSAASPAQQLPTSHPGPGPH 193
Score = 38.9 bits (89), Expect = 0.016
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 44 NHHHHHHHQQPHQYLQHGAEGSPKAQPKPLKHEQKHTLQQHQETP 88
+HHHHHHH PH H G+ A + H H HQ +P
Sbjct: 131 HHHHHHHHPHPH----HAYPGAGVAHDELGPHAHPHHHHHHQASP 171
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.124 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,890,393
Number of Sequences: 37866
Number of extensions: 1431826
Number of successful extensions: 13945
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 274
Number of HSP's that attempted gapping in prelim test: 7057
Number of HSP's gapped (non-prelim): 2979
length of query: 695
length of database: 18,247,518
effective HSP length: 109
effective length of query: 586
effective length of database: 14,120,124
effective search space: 8274392664
effective search space used: 8274392664
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.