Guide to the Human Genome
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Name: PHLDA1 Sequence: fasta or formatted (401aa) NCBI GI: 83977459
Description:

pleckstrin homology-like domain, family A, member 1

Referenced in:

Growth Hormone and Related Hormones

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         23           2
 C cysteine            2.2          9           2
 D aspartate           1.7          7           1
 E glutamate           5.5         22           2
 F phenylalanine       1.5          6           1
 G glycine             7.5         30           2
 H histidine           5.2         21           1
 I isoleucine          2.0          8           1
 K lysine              4.5         18           3
 L leucine             9.5         38           4
 M methionine          1.5          6           1
 N asparagine          1.2          5           1
 P proline            15.7         63           4
 Q glutamine          14.0         56          15
 R arginine            7.7         31           2
 S serine              6.2         25           2
 T threonine           2.2          9           1
 V valine              3.2         13           2
 W tryptophan          1.5          6           1
 Y tyrosine            1.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleckstrin homology-like domain, family A, member 1 ... 
PHLDA3                0.104   pleckstrin homology-like domain, family A, member 3 [...
PHLDA2                0.100   pleckstrin homology-like domain family A member 2 [Ho...
RBM33                 0.058   RNA binding motif protein 33 
BRD4                  0.058   bromodomain-containing protein 4 isoform long 
POU6F2                0.055   POU domain, class 6, transcription factor 2 
MYST3                 0.052   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.052   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.052   MYST histone acetyltransferase (monocytic leukemia)...
MED15                 0.050   mediator complex subunit 15 isoform b 
MED15                 0.048   mediator complex subunit 15 isoform a 
KPRP                  0.047   keratinocyte proline-rich protein 
CIZ1                  0.047   CDKN1A interacting zinc finger protein 1 isoform 1 ...
CIZ1                  0.047   CDKN1A interacting zinc finger protein 1 isoform 1 [...
HTT                   0.046   huntingtin 
DGKK                  0.046   diacylglycerol kinase kappa 
LOC100288473          0.044   PREDICTED: hypothetical protein XP_002343336 
FOXJ2                 0.044   forkhead box J2 
CREB5                 0.044   cAMP responsive element binding protein 5 isoform de...
CREB5                 0.044   cAMP responsive element binding protein 5 isoform be...
CREB5                 0.044   cAMP responsive element binding protein 5 isoform ga...
CREB5                 0.044   cAMP responsive element binding protein 5 isoform al...
PPP1R13L              0.043   protein phosphatase 1, regulatory subunit 13 like [...
PPP1R13L              0.043   protein phosphatase 1, regulatory subunit 13 like [H...
ARID1A                0.043   AT rich interactive domain 1A isoform a 
ARID1A                0.043   AT rich interactive domain 1A isoform b 
RERE                  0.043   atrophin-1 like protein isoform b 
RERE                  0.043   atrophin-1 like protein isoform a 
RERE                  0.043   atrophin-1 like protein isoform a 
EP400                 0.042   E1A binding protein p400 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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