Guide to the Human Genome
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Name: FAM76B Sequence: fasta or formatted (339aa) NCBI GI: 134288896
Description:

hypothetical protein LOC143684

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         16           2
 C cysteine            5.0         17           1
 D aspartate           2.9         10           1
 E glutamate           7.4         25           3
 F phenylalanine       2.4          8           1
 G glycine             3.8         13           2
 H histidine           5.6         19          10
 I isoleucine          3.5         12           2
 K lysine             13.0         44           3
 L leucine             8.0         27           2
 M methionine          1.2          4           1
 N asparagine          3.8         13           1
 P proline             3.5         12           2
 Q glutamine           8.8         30           2
 R arginine            4.1         14           2
 S serine             11.2         38           5
 T threonine           5.9         20           1
 V valine              2.4          8           1
 W tryptophan          0.6          2           1
 Y tyrosine            2.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC143684 
FAM76A                0.626   hypothetical protein LOC199870 isoform 3 
FAM76A                0.597   hypothetical protein LOC199870 isoform 1 
FAM76A                0.566   hypothetical protein LOC199870 isoform 4 
FAM76A                0.538   hypothetical protein LOC199870 isoform 2 
FAM76A                0.383   hypothetical protein LOC199870 isoform 5 
NUFIP2                0.043   nuclear fragile X mental retardation protein interac...
ERC2                  0.037   cytomatrix protein p110 
C10orf140             0.034   hypothetical protein LOC387640 
DLGAP3                0.034   discs, large (Drosophila) homolog-associated protei...
FOXB2                 0.034   forkhead box B2 
NR4A3                 0.031   nuclear receptor subfamily 4, group A, member 3 isof...
NR4A3                 0.031   nuclear receptor subfamily 4, group A, member 3 isof...
NR4A3                 0.031   nuclear receptor subfamily 4, group A, member 3 isof...
NR4A3                 0.031   nuclear receptor subfamily 4, group A, member 3 isof...
ARID1B                0.031   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.031   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.031   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
MEOX2                 0.030   mesenchyme homeobox 2 
FOXG1                 0.030   forkhead box G1 
DYRK1A                0.030   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.030   dual-specificity tyrosine-(Y)-phosphorylation regula...
CACNA1G               0.028   voltage-dependent calcium channel alpha 1G subunit i...
FUSSEL18              0.028   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.028   PREDICTED: functional smad suppressing element 18 [...
CACNA1G               0.028   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.028   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.028   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.028   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.028   voltage-dependent calcium channel alpha 1G subunit i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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