Guide to the Human Genome
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Name: MAFB Sequence: fasta or formatted (323aa) NCBI GI: 23308699
Description:

transcription factor MAFB

Referenced in:

Ets Family
Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         28           2
 C cysteine            1.2          4           1
 D aspartate           4.0         13           2
 E glutamate           6.8         22           1
 F phenylalanine       3.1         10           2
 G glycine             5.6         18           2
 H histidine           8.4         27           8
 I isoleucine          0.9          3           1
 K lysine              4.6         15           2
 L leucine             8.4         27           2
 M methionine          1.9          6           1
 N asparagine          2.8          9           1
 P proline             9.9         32           3
 Q glutamine           5.9         19           2
 R arginine            5.9         19           2
 S serine             10.5         34           2
 T threonine           4.3         14           1
 V valine              4.6         15           1
 W tryptophan          0.3          1           1
 Y tyrosine            2.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transcription factor MAFB 
MAF                   0.467   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.467   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
MAFA                  0.433   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
NRL                   0.262   neural retina leucine zipper 
MAFK                  0.139   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
MAFG                  0.131   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
MAFG                  0.131   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAFF                  0.125   transcription factor MAFF isoform a 
MAFF                  0.125   transcription factor MAFF isoform a 
MAFF                  0.125   transcription factor MAFF isoform a 
MAFF                  0.116   transcription factor MAFF isoform b 
CREB5                 0.060   cAMP responsive element binding protein 5 isoform de...
CREB5                 0.060   cAMP responsive element binding protein 5 isoform be...
CREB5                 0.060   cAMP responsive element binding protein 5 isoform ga...
CREB5                 0.060   cAMP responsive element binding protein 5 isoform al...
FOXG1                 0.054   forkhead box G1 
FOXB2                 0.052   forkhead box B2 
IQSEC1                0.049   IQ motif and Sec7 domain 1 isoform a 
PRR7                  0.043   proline rich 7 (synaptic) 
NLK                   0.042   nemo like kinase 
OTX1                  0.042   orthodenticle homeobox 1 
RBM33                 0.042   RNA binding motif protein 33 
C10orf140             0.042   hypothetical protein LOC387640 
NFE2                  0.039   nuclear factor, erythroid derived 2 isoform 1 
NFE2                  0.039   nuclear factor, erythroid derived 2 isoform 2 [Homo...
NUFIP2                0.039   nuclear fragile X mental retardation protein interac...
TBX1                  0.037   T-box 1 isoform C 
CDX2                  0.035   caudal type homeobox 2 
CBX4                  0.034   chromobox homolog 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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