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Search of human proteins with 32454739
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32454739 tripartite motif-containing 3 [Homo sapiens]
(744 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32454739 tripartite motif-containing 3 [Homo sapiens] 1496 0.0
gi|32454737 tripartite motif-containing 3 [Homo sapiens] 1496 0.0
gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens] 1033 0.0
gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens] 1033 0.0
gi|84993742 tripartite motif-containing 71 [Homo sapiens] 321 1e-87
gi|224548921 tripartite motif-containing 45 isoform 1 [Homo sapi... 155 2e-37
gi|30794216 tripartite motif-containing 56 [Homo sapiens] 149 1e-35
gi|224548923 tripartite motif-containing 45 isoform 2 [Homo sapi... 138 2e-32
gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens] 105 1e-22
gi|74027251 tripartite motif-containing 33 protein isoform beta ... 91 3e-18
gi|74027249 tripartite motif-containing 33 protein isoform alpha... 91 3e-18
gi|19924163 muscle specific ring finger protein 1 [Homo sapiens] 90 9e-18
gi|27436877 tripartite motif-containing 59 [Homo sapiens] 89 2e-17
gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens] 88 3e-17
gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens] 88 3e-17
gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens] 88 3e-17
gi|38679905 tripartite motif-containing 65 [Homo sapiens] 87 7e-17
gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens] 87 7e-17
gi|47419911 transcriptional intermediary factor 1 alpha isoform ... 85 3e-16
gi|47419909 transcriptional intermediary factor 1 alpha isoform ... 85 3e-16
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 83 1e-15
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 83 1e-15
gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens] 82 1e-15
gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens] 81 3e-15
gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens] 81 3e-15
gi|47132521 ret finger protein 2 isoform 1 [Homo sapiens] 81 3e-15
gi|5032179 tripartite motif-containing 28 protein [Homo sapiens] 79 2e-14
gi|217035095 tripartite motif-containing 62 [Homo sapiens] 76 1e-13
gi|15208643 ADP-ribosylation factor domain protein 1 isoform gam... 74 4e-13
gi|15208641 ADP-ribosylation factor domain protein 1 isoform bet... 74 4e-13
>gi|32454739 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 1496 bits (3872), Expect = 0.0
Identities = 744/744 (100%), Positives = 744/744 (100%)
Query: 1 MAKREDSPGPEVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCP 60
MAKREDSPGPEVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCP
Sbjct: 1 MAKREDSPGPEVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCP 60
Query: 61 VCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEG 120
VCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEG
Sbjct: 61 VCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEG 120
Query: 121 KTMEFYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAI 180
KTMEFYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAI
Sbjct: 121 KTMEFYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAI 180
Query: 181 ALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDT 240
ALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDT
Sbjct: 181 ALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDT 240
Query: 241 LRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELVL 300
LRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELVL
Sbjct: 241 LRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELVL 300
Query: 301 EVDGLRRSVLNLGALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSA 360
EVDGLRRSVLNLGALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSA
Sbjct: 301 EVDGLRRSVLNLGALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSA 360
Query: 361 ELRAEITGPDGTRLPVPVVDHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPFRVRALR 420
ELRAEITGPDGTRLPVPVVDHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPFRVRALR
Sbjct: 361 ELRAEITGPDGTRLPVPVVDHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPFRVRALR 420
Query: 421 PGDLPPSPDDVKRRVKSPGGPGSHVRQKAVRRPSSMYSTGGKRKDNPIEDELVFRVGSRG 480
PGDLPPSPDDVKRRVKSPGGPGSHVRQKAVRRPSSMYSTGGKRKDNPIEDELVFRVGSRG
Sbjct: 421 PGDLPPSPDDVKRRVKSPGGPGSHVRQKAVRRPSSMYSTGGKRKDNPIEDELVFRVGSRG 480
Query: 481 REKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVA 540
REKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVA
Sbjct: 481 REKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVA 540
Query: 541 VDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVF 600
VDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVF
Sbjct: 541 VDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVF 600
Query: 601 TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFG 660
TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFG
Sbjct: 601 TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFG 660
Query: 661 SHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGPQGLA 720
SHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGPQGLA
Sbjct: 661 SHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGPQGLA 720
Query: 721 LTSDGHVVVADAGNHCFKAYRYLQ 744
LTSDGHVVVADAGNHCFKAYRYLQ
Sbjct: 721 LTSDGHVVVADAGNHCFKAYRYLQ 744
>gi|32454737 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 1496 bits (3872), Expect = 0.0
Identities = 744/744 (100%), Positives = 744/744 (100%)
Query: 1 MAKREDSPGPEVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCP 60
MAKREDSPGPEVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCP
Sbjct: 1 MAKREDSPGPEVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCP 60
Query: 61 VCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEG 120
VCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEG
Sbjct: 61 VCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEG 120
Query: 121 KTMEFYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAI 180
KTMEFYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAI
Sbjct: 121 KTMEFYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAI 180
Query: 181 ALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDT 240
ALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDT
Sbjct: 181 ALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDT 240
Query: 241 LRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELVL 300
LRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELVL
Sbjct: 241 LRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELVL 300
Query: 301 EVDGLRRSVLNLGALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSA 360
EVDGLRRSVLNLGALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSA
Sbjct: 301 EVDGLRRSVLNLGALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSA 360
Query: 361 ELRAEITGPDGTRLPVPVVDHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPFRVRALR 420
ELRAEITGPDGTRLPVPVVDHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPFRVRALR
Sbjct: 361 ELRAEITGPDGTRLPVPVVDHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPFRVRALR 420
Query: 421 PGDLPPSPDDVKRRVKSPGGPGSHVRQKAVRRPSSMYSTGGKRKDNPIEDELVFRVGSRG 480
PGDLPPSPDDVKRRVKSPGGPGSHVRQKAVRRPSSMYSTGGKRKDNPIEDELVFRVGSRG
Sbjct: 421 PGDLPPSPDDVKRRVKSPGGPGSHVRQKAVRRPSSMYSTGGKRKDNPIEDELVFRVGSRG 480
Query: 481 REKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVA 540
REKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVA
Sbjct: 481 REKGEFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVA 540
Query: 541 VDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVF 600
VDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVF
Sbjct: 541 VDTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVF 600
Query: 601 TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFG 660
TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFG
Sbjct: 601 TFQPNGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFG 660
Query: 661 SHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGPQGLA 720
SHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGPQGLA
Sbjct: 661 SHGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGPQGLA 720
Query: 721 LTSDGHVVVADAGNHCFKAYRYLQ 744
LTSDGHVVVADAGNHCFKAYRYLQ
Sbjct: 721 LTSDGHVVVADAGNHCFKAYRYLQ 744
>gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens]
Length = 744
Score = 1033 bits (2672), Expect = 0.0
Identities = 498/740 (67%), Positives = 609/740 (82%), Gaps = 7/740 (0%)
Query: 8 PGPEVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSI 67
P P V+ +DKQFL+CSICL+RY+ PKVLPCLHTFCERCLQNYIPA SLTLSCPVCRQTSI
Sbjct: 9 PSPVVRQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSI 68
Query: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDP---HPLSVVAGRPLSCPNHEGKTME 124
LPE+GV+ALQNNFFI++LM+ +Q+ P G++ E +V AG+PLSCPNH+G ME
Sbjct: 69 LPEKGVAALQNNFFITNLMDVLQRTP-GSNAEESSILETVTAVAAGKPLSCPNHDGNVME 127
Query: 125 FYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVG 184
FYC++CETAMC EC GEH EH TV L+DVVEQHKA+LQ QL+AV RLP++ +A+ +
Sbjct: 128 FYCQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLDAVNKRLPEIDSALQFIS 187
Query: 185 GISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQG 244
I QL +KA + I + F++L++ L RK L+ +LE G K KVLQSQLDTL QG
Sbjct: 188 EIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKVLQSQLDTLLQG 247
Query: 245 QEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELVLEVDG 304
QE I S +F QAL G+ EVLLV+K M E+L LA Q FP P EN QL+ ++E +G
Sbjct: 248 QESIKSCSNFTAQALNHGTETEVLLVKKQMSEKLNELADQDFPLHPRENDQLDFIVETEG 307
Query: 305 LRRSVLNLGALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSAELRA 364
L++S+ NLG +LTT+A A ETVATGEGLRQ ++GQP S+T+TTKDKDG L +TG+A L A
Sbjct: 308 LKKSIHNLGTILTTNAVASETVATGEGLRQTIIGQPMSVTITTKDKDGELCKTGNAYLTA 367
Query: 365 EITGPDGTRLPVPVVDHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPFRVRALRPGDL 424
E++ PDG+ ++D+KNGTYE +YT + EG+ LS+ LY Q +RGSPF+++ +R D+
Sbjct: 368 ELSTPDGSVADGEILDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKVIRSADV 427
Query: 425 PPSPDDVKRRVKSPGGPGSHVRQKAVRRPSSMYSTGGKRKDNPIEDELVFRVGSRGREKG 484
P+ + VKRRVKSPG HV+QKAV+RP+SMYSTG KRK+NPIED+L+FRVG++GR KG
Sbjct: 428 SPTTEGVKRRVKSPGS--GHVKQKAVKRPASMYSTG-KRKENPIEDDLIFRVGTKGRNKG 484
Query: 485 EFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTN 544
EFTNLQGV+A+++G+I++ADSNNQC+Q+FSN+GQFK RFG+RGRSPGQLQRPTGVAV +
Sbjct: 485 EFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPS 544
Query: 545 GDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQP 604
GDII+ADYDN+WVSIFS +GKFKTKIG+G+LMGPKGV+VDRNGHIIVVDNK+CCVF FQP
Sbjct: 545 GDIIIADYDNKWVSIFSSDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFIFQP 604
Query: 605 NGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGE 664
NGK+V RFG RG DR FAGPHF AVN+ NEI++TDFHNHSVKV++ +GEF+ KFGS+GE
Sbjct: 605 NGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGE 664
Query: 665 GNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGPQGLALTSD 724
GNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFD SGSFLSYINTSA+PLYGPQGLALTSD
Sbjct: 665 GNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSD 724
Query: 725 GHVVVADAGNHCFKAYRYLQ 744
GHVVVAD+GNHCFK YRYLQ
Sbjct: 725 GHVVVADSGNHCFKVYRYLQ 744
>gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens]
Length = 771
Score = 1033 bits (2672), Expect = 0.0
Identities = 498/740 (67%), Positives = 609/740 (82%), Gaps = 7/740 (0%)
Query: 8 PGPEVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSI 67
P P V+ +DKQFL+CSICL+RY+ PKVLPCLHTFCERCLQNYIPA SLTLSCPVCRQTSI
Sbjct: 36 PSPVVRQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSI 95
Query: 68 LPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDP---HPLSVVAGRPLSCPNHEGKTME 124
LPE+GV+ALQNNFFI++LM+ +Q+ P G++ E +V AG+PLSCPNH+G ME
Sbjct: 96 LPEKGVAALQNNFFITNLMDVLQRTP-GSNAEESSILETVTAVAAGKPLSCPNHDGNVME 154
Query: 125 FYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVG 184
FYC++CETAMC EC GEH EH TV L+DVVEQHKA+LQ QL+AV RLP++ +A+ +
Sbjct: 155 FYCQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLDAVNKRLPEIDSALQFIS 214
Query: 185 GISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQG 244
I QL +KA + I + F++L++ L RK L+ +LE G K KVLQSQLDTL QG
Sbjct: 215 EIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKVLQSQLDTLLQG 274
Query: 245 QEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELVLEVDG 304
QE I S +F QAL G+ EVLLV+K M E+L LA Q FP P EN QL+ ++E +G
Sbjct: 275 QESIKSCSNFTAQALNHGTETEVLLVKKQMSEKLNELADQDFPLHPRENDQLDFIVETEG 334
Query: 305 LRRSVLNLGALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSAELRA 364
L++S+ NLG +LTT+A A ETVATGEGLRQ ++GQP S+T+TTKDKDG L +TG+A L A
Sbjct: 335 LKKSIHNLGTILTTNAVASETVATGEGLRQTIIGQPMSVTITTKDKDGELCKTGNAYLTA 394
Query: 365 EITGPDGTRLPVPVVDHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPFRVRALRPGDL 424
E++ PDG+ ++D+KNGTYE +YT + EG+ LS+ LY Q +RGSPF+++ +R D+
Sbjct: 395 ELSTPDGSVADGEILDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKVIRSADV 454
Query: 425 PPSPDDVKRRVKSPGGPGSHVRQKAVRRPSSMYSTGGKRKDNPIEDELVFRVGSRGREKG 484
P+ + VKRRVKSPG HV+QKAV+RP+SMYSTG KRK+NPIED+L+FRVG++GR KG
Sbjct: 455 SPTTEGVKRRVKSPGS--GHVKQKAVKRPASMYSTG-KRKENPIEDDLIFRVGTKGRNKG 511
Query: 485 EFTNLQGVSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTN 544
EFTNLQGV+A+++G+I++ADSNNQC+Q+FSN+GQFK RFG+RGRSPGQLQRPTGVAV +
Sbjct: 512 EFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPS 571
Query: 545 GDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQP 604
GDII+ADYDN+WVSIFS +GKFKTKIG+G+LMGPKGV+VDRNGHIIVVDNK+CCVF FQP
Sbjct: 572 GDIIIADYDNKWVSIFSSDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFIFQP 631
Query: 605 NGKLVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGE 664
NGK+V RFG RG DR FAGPHF AVN+ NEI++TDFHNHSVKV++ +GEF+ KFGS+GE
Sbjct: 632 NGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGE 691
Query: 665 GNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGPQGLALTSD 724
GNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFD SGSFLSYINTSA+PLYGPQGLALTSD
Sbjct: 692 GNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSD 751
Query: 725 GHVVVADAGNHCFKAYRYLQ 744
GHVVVAD+GNHCFK YRYLQ
Sbjct: 752 GHVVVADSGNHCFKVYRYLQ 771
>gi|84993742 tripartite motif-containing 71 [Homo sapiens]
Length = 868
Score = 321 bits (823), Expect = 1e-87
Identities = 220/658 (33%), Positives = 322/658 (48%), Gaps = 54/658 (8%)
Query: 88 AMQQAPDGAHDPEDPHP-LSVVAGRPLSCPNHEGKTMEFYCEACETAMCGECRAGEHREH 146
A QQ G P P LSV R C +H+ + + YC+ C +C EC G H H
Sbjct: 250 AAQQLGLGPPFPGPPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPICRECTMGRHGGH 309
Query: 147 GTVLLRDVVEQHKA-ALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKAEALAQISAAF 205
+ L++ ++ +A +Q +A +GR + +I +++Q++ + +++ A
Sbjct: 310 SFIYLQEALQDSRALTIQLLADAQQGR-QAIQLSIEQAQTVAEQVEMKAKVVQSEVKAVT 368
Query: 206 EDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIGSSCSFAEQALRLGSAP 265
++AL++R+ L+ +E I K K L Q++ LRQ + S+ S +Q L G A
Sbjct: 369 ARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLESTISAVQQVLEEGRAL 428
Query: 266 EVLLVRKHMRERLAALAAQAFPERPHENAQLELVLEVDGLRRSVLNLGALLTTSATAHET 325
++LL R M ++ L +P E+ ++ L ++ + G +++ A A T
Sbjct: 429 DILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLAIKSFG-FVSSGAFAPLT 487
Query: 326 VATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSAELRAEITGPDGTRLPVPVVDHKNGT 385
ATG+GL++AL G+ AS TV D DG +G + A + GPDG V D +NGT
Sbjct: 488 KATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAEVSDQQNGT 547
Query: 386 YELVYTARTEGELLLSVLLYGQPVRGSPFRVRALRPGDLPPSPDDVKRRVKSPGGPGSHV 445
Y + Y + EGE L+SV L Q + SPF+V ++ G R G PG
Sbjct: 548 YVVSYRPQLEGEHLVSVTLCNQHIENSPFKV-VVKSG----------RSYVGIGLPG--- 593
Query: 446 RQKAVRRPSSMYSTGGKRKDNPIEDELVFRVGSRGREKGEFTNLQGVSAASSGRIVVADS 505
GS G G+ GVS G I+VAD
Sbjct: 594 ----------------------------LSFGSEGDSDGKLCRPWGVSVDKEGYIIVADR 625
Query: 506 NNQCIQVFSNEGQFKFRFGVRGRSPGQLQRPTGVAVDTNGDIIVADYDNRWVSIFSPEGK 565
+N IQVF G F +FG G PGQ RP GVA D + I+VAD DN + IF+ EG+
Sbjct: 626 SNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQ 685
Query: 566 FKTKIGA-----GRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNGKLVGRFGGRGATDR 620
F K G G+ P VAV+ G I+V D ++ + F P+G + ++G GA +
Sbjct: 686 FLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWK 745
Query: 621 HFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDSN 680
HF P VA N++ +VVTDF+NH + V D + GS G GNGQF P GVAVD
Sbjct: 746 HFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQE 805
Query: 681 GNIIVADWGNSRIQVFDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNH 735
G IIVAD N R+Q+F+S+GSFL + P G+A+T DG +VV D GN+
Sbjct: 806 GRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFGQMDRPSGIAITPDGMIVVVDFGNN 863
Score = 60.8 bits (146), Expect = 4e-09
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 624 GPHFVAVNNKNEIVVTDFHNHSVKV---YSADGEFLFKFGSHGEGNGQFNAPTGVAVDSN 680
G H V+V N+ + VK Y G FGS G+ +G+ P GV+VD
Sbjct: 558 GEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSDGKLCRPWGVSVDKE 617
Query: 681 GNIIVADWGNSRIQVFDSSGSFLSYINTSAE---PLYGPQGLALTSDGHVVVADAGNHCF 737
G IIVAD N+RIQVF G+F T P G+A + +VVAD NH
Sbjct: 618 GYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKDNHRI 677
Query: 738 KAYRY 742
+ + +
Sbjct: 678 QIFTF 682
Score = 52.4 bits (124), Expect = 2e-06
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 16/95 (16%)
Query: 34 VLPCLHTFCERCLQNY-IPA-------QSLTLSCPVCRQTSILPE-QGVSALQNN-FFIS 83
VLPCLH FC CL+ + +PA + L L CPVC Q +L E G+ AL ++ F +S
Sbjct: 58 VLPCLHAFCRPCLEAHRLPAAGGGAAGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLS 117
Query: 84 SLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNH 118
+L++A+ D +P P + AG P H
Sbjct: 118 NLLDAVVATAD------EPPPKNGRAGAPAGAGGH 146
>gi|224548921 tripartite motif-containing 45 isoform 1 [Homo
sapiens]
Length = 580
Score = 155 bits (391), Expect = 2e-37
Identities = 124/471 (26%), Positives = 189/471 (40%), Gaps = 72/471 (15%)
Query: 22 CSICLDRYQCPKVLPCLHTFCERCLQNYIP----------------------------AQ 53
C +CL ++ P++LPCLHT C CL+ P
Sbjct: 29 CPLCLGLFKAPRLLPCLHTVCTTCLEQLEPFSVVDIRGGDSDTSSEGSIFQELKPRSLQS 88
Query: 54 SLTLSCPVCRQTSILPEQGVSALQ------NNFFISSLMEAMQ----------------- 90
+ + CPVC LP GV AL N+ + SL Q
Sbjct: 89 QIGILCPVCDAQVDLPMGGVKALTIDHLAVNDVMLESLRGEGQGLVCDLCNDREVEKRCQ 148
Query: 91 ----------------QAPDGAHDPEDPHPLSVVA--GRPLSCPNHEGKTMEFYCEACET 132
Q H D L + G+P+ CP H + + +CE C+
Sbjct: 149 TCKANLCHFCCQAHRRQKKTTYHTMVDLKDLKGYSRIGKPILCPVHPAEELRLFCEFCDR 208
Query: 133 AMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQE 192
+C +C GEHREH +V+ +H ++ L+ + + L A+A + I+ LQ+
Sbjct: 209 PVCQDCVVGEHREHPCDFTSNVIHKHGDSVWELLKGTQPHVEALEEALAQIHIINSALQK 268
Query: 193 RKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIGSSC 252
R A + E +A+++ + L+ LE I K+ LQ Q L Q + +
Sbjct: 269 RVEAVAADVRTFSEGYIKAIEEHRDKLLKQLEDIRAQKENSLQLQKAQLEQLLADMRTGV 328
Query: 253 SFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELV-LEVDGLRRSVLN 311
F E L GS E+L+ ++ + ERL L + RP N ++ E G R
Sbjct: 329 EFTEHLLTSGSDLEILITKRVVVERLRKLNKVQYSTRPGVNDKIRFCPQEKAGQCRGYEI 388
Query: 312 LGALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSAELRAEITGPDG 371
G + T + V GE L +A Q AS T+ KD G ++ G ++ + D
Sbjct: 389 YGTINTKEVDPAKCVLQGEDLHRAREKQTASFTLLCKDAAGEIMGRGGDNVQVAVVPKDK 448
Query: 372 TRLPV--PVVDHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPFRVRALR 420
PV V D+K+GTY + YT + G + V + Q V+GSPF V R
Sbjct: 449 KDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTVMVRR 499
>gi|30794216 tripartite motif-containing 56 [Homo sapiens]
Length = 755
Score = 149 bits (375), Expect = 1e-35
Identities = 182/794 (22%), Positives = 298/794 (37%), Gaps = 119/794 (14%)
Query: 12 VQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSILPEQ 71
++ + FL C ICL++ + PK LPCLHT+C+ CL A + CP CR+T +P +
Sbjct: 11 LEALSSDFLACKICLEQLRAPKTLPCLHTYCQDCLAQL--ADGGRVRCPECRETVPVPPE 68
Query: 72 GVSALQNNFFISSLMEAM------------------------------------------ 89
GV++ + NFF++ L++ +
Sbjct: 69 GVASFKTNFFVNGLLDLVKARACGDLRAGKPACALCPLVGGTSTGGPATARCLDCADDLC 128
Query: 90 QQAPDGAHDPEDPHPLSVV------AG---------RPLSCPNHEGKTMEFYCEACETAM 134
Q DG H VV AG + CP H G+ + F C+ C +
Sbjct: 129 QACADGHRCTRQTHTHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFLCQPCSQLL 188
Query: 135 CGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQERK 194
C ECR H +H + L + V + L+ L V L +L AA + +L+E+
Sbjct: 189 CRECRLDPHLDHPCLPLAEAVRARRPGLEGLLAGVDNNLVELEAARRVEKEALARLREQA 248
Query: 195 AEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIGSSCSF 254
A Q+ A E + +AL +KQ ++ L A ++ + +L L ++ ++ +F
Sbjct: 249 ARVGTQVEEAAEGVLRALLAQKQEVLGQLRAHVEAAEEAARERLAELEGREQVARAAAAF 308
Query: 255 AEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELVLEVDGLRRSVLNLGA 314
A + L LG E+L + + +RL L Q P P L LE L +L+
Sbjct: 309 ARRVLSLGREAEILSLEGAIAQRLRQL--QGCPWAPGPAPCLLPQLE---LHPGLLDKNC 363
Query: 315 LLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSAELRAEITGPDGTRL 374
L + E +G + Q + + ++ + + R G + +A DG +
Sbjct: 364 HL-LRLSFEEQQPQKDGGKDGAGTQGGEESQSRREDEPKTERQGGVQPQA----GDGAQT 418
Query: 375 PVPVVDHKNGTYELVYTARTEGELLLSVLLYGQPVR-GSPFRVRALRPGDLPPSPDDVKR 433
P E T R EG L P G P R RP + K+
Sbjct: 419 P---------KEEKAQTTREEGAQTLEEDRAQTPHEDGGPQPHRGGRP--------NKKK 461
Query: 434 RVKSPGGPGSHVRQKAVRRPSSMYSTGGKRKDNPIEDELVFRVGSRGREKGE--FTNLQG 491
+ K R K++ R S + G + + +F R G+ + G
Sbjct: 462 KFKG--------RLKSISREPSP-ALGPNLDGSGLLPRPIFYCSFPTRMPGDKRSPRITG 512
Query: 492 VSAASSGRIVVADSNNQCIQVFSNEGQFKFRFGV-RGRSP---GQLQRPTGVAVDTNGDI 547
+ I+VAD N+ ++ FS G +K V G SP LQ + +
Sbjct: 513 LCPFGPREILVADEQNRALKRFSLNGDYKGTVPVPEGCSPCSVAALQSAVAFSASARLYL 572
Query: 548 IVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVAVDRNGHIIVVDNKSCCVFTFQPNGK 607
I + + +W S + L VAV GH+ V + G
Sbjct: 573 INPNGEVQWRRALSLS---QASHAVAALPSGDRVAVSVAGHVEV----------YNMEGS 619
Query: 608 LVGRFGGRGATDRHFAGPHFVAVNNKNEIVVTDFHNHSVKVYSADGEFLFKFGSHGEGNG 667
L RF G R F+ + + V +D+ +SV + G+ + ++ G
Sbjct: 620 LATRFIPGGKASRGLRALVFLTTSPQGHFVGSDWQQNSVVICDGLGQVVGEYKGPGLHGC 679
Query: 668 QFNAPTGVAVDSNGNIIVADWGNSRIQVFDSSGSFLSYINTSAEPLYGPQGLALTSDGHV 727
Q P V+VD G I + +++ + D GS L T+ L P+ + DG
Sbjct: 680 Q---PGSVSVDKKGYIFLTLREVNKVVILDPKGSLLGDFLTAYHGLEKPRVTTMV-DGRY 735
Query: 728 VVADAGNHCFKAYR 741
+V N +R
Sbjct: 736 LVVSLSNGTIHIFR 749
>gi|224548923 tripartite motif-containing 45 isoform 2 [Homo
sapiens]
Length = 562
Score = 138 bits (347), Expect = 2e-32
Identities = 117/470 (24%), Positives = 182/470 (38%), Gaps = 88/470 (18%)
Query: 22 CSICLDRYQCPKVLPCLHTFCERCLQNYIP----------------------------AQ 53
C +CL ++ P++LPCLHT C CL+ P
Sbjct: 29 CPLCLGLFKAPRLLPCLHTVCTTCLEQLEPFSVVDIRGGDSDTSSEGSIFQELKPRSLQS 88
Query: 54 SLTLSCPVCRQTSILPEQGVSALQ------NNFFISSLMEAMQ----------------- 90
+ + CPVC LP GV AL N+ + SL Q
Sbjct: 89 QIGILCPVCDAQVDLPMGGVKALTIDHLAVNDVMLESLRGEGQGLVCDLCNDREVEKRCQ 148
Query: 91 ----------------QAPDGAHDPEDPHPLSVVA--GRPLSCPNHEGKTMEFYCEACET 132
Q H D L + G+P+ CP H + + +CE C+
Sbjct: 149 TCKANLCHFCCQAHRRQKKTTYHTMVDLKDLKGYSRIGKPILCPVHPAEELRLFCEFCDR 208
Query: 133 AMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQE 192
+C +C GEHREH +V+ +H ++ L+ + + L A+A + I+ LQ+
Sbjct: 209 PVCQDCVVGEHREHPCDFTSNVIHKHGDSVWELLKGTQPHVEALEEALAQIHIINSALQK 268
Query: 193 RKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIGSSC 252
R A + E +A+++ + L+ LE I K+ LQ Q L Q + +
Sbjct: 269 RVEAVAADVRTFSEGYIKAIEEHRDKLLKQLEDIRAQKENSLQLQKAQLEQLLADMRTGV 328
Query: 253 SFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELVLEVDGLRRSVLNL 312
F E L GS E+L+ ++ + ERL L + RP N ++ +
Sbjct: 329 EFTEHLLTSGSDLEILITKRVVVERLRKLNKVQYSTRPGVNDKIRFCPQEK--------- 379
Query: 313 GALLTTSATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSAELRAEITGPDGT 372
+E L +A Q AS T+ KD G ++ G ++ + D
Sbjct: 380 ----AGQCRGYEIY----DLHRAREKQTASFTLLCKDAAGEIMGRGGDNVQVAVVPKDKK 431
Query: 373 RLPV--PVVDHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPFRVRALR 420
PV V D+K+GTY + YT + G + V + Q V+GSPF V R
Sbjct: 432 DSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTVMVRR 481
>gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens]
Length = 358
Score = 105 bits (263), Expect = 1e-22
Identities = 72/287 (25%), Positives = 129/287 (44%), Gaps = 28/287 (9%)
Query: 15 MDKQFLVCSICLDRYQCPKV-LPCLHTFCERCLQNYIPAQ--------SLTLS------C 59
++KQ L+C ICL+ + P V LPC H C +C + A S T+S C
Sbjct: 20 LEKQ-LICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRC 78
Query: 60 PVCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHE 119
P CR +L GV LQ N + ++++ +Q E PL A + L C HE
Sbjct: 79 PSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQ--------ESSRPLHSKAEQHLMCEEHE 130
Query: 120 GKTMEFYCEACETAMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSA 178
+ + YC +CE C C+ G H++ L + ++ K+ L + + ++ A
Sbjct: 131 EEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGNDRVQA 190
Query: 179 AIALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQL 238
I + + Q +++ ++ FE L L++RK L L+ + +++ LQ
Sbjct: 191 VITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGEL---LQALAREQEEKLQRVR 247
Query: 239 DTLRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQA 285
+RQ +H+ +S E A++ P++ L + +E + + A +
Sbjct: 248 GLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMS 294
>gi|74027251 tripartite motif-containing 33 protein isoform beta
[Homo sapiens]
Length = 1110
Score = 91.3 bits (225), Expect = 3e-18
Identities = 86/373 (23%), Positives = 150/373 (40%), Gaps = 62/373 (16%)
Query: 8 PGPEVQPMDKQFLVCSICLDRYQC-----PKVLPCLHTFCERCL-----QNYIPA----- 52
PGP +D C++C Q PK+LPCLH+FC RCL Q +P
Sbjct: 115 PGPPASLLD----TCAVCQQSLQSRREAEPKLLPCLHSFCLRCLPEPERQLSVPIPGGSN 170
Query: 53 ----QSLTLSCPVCRQ---------------TSILP-------EQGVSALQNN------- 79
Q + CPVCRQ TS P EQ ++ ++N
Sbjct: 171 GDIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSEAPSSSDEKSEQVCTSCEDNASAVGFC 230
Query: 80 -----FFISSLMEAMQQAP---DGAHDPEDPHPLSVVAG--RPLSCPNHEGKTMEFYCEA 129
+ + +EA Q+ D ++ SV A RP+ CP H+ + ++ +CE
Sbjct: 231 VECGEWLCKTCIEAHQRVKFTKDHLIRKKEDVSESVGASGQRPVFCPVHKQEQLKLFCET 290
Query: 130 CETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQ 189
C+ C +C+ EH+EH L + + K A++ L + + + A V ++
Sbjct: 291 CDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKLLEKKNYVHFAATQVQNRIKE 350
Query: 190 LQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIG 249
+ E +I A L + ++ ++L+ LE + +Q L Q + + +
Sbjct: 351 VNETNKRVEQEIKVAIFTLINEINKKGKSLLQQLENVTKERQMKLLQQQNDITGLSRQVK 410
Query: 250 SSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELVLEVDGLRRSV 309
+F A+ GS+ +L ++ + +L + P N + + ++V
Sbjct: 411 HVMNFTNWAIASGSSTALLYSKRLITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNV 470
Query: 310 LNLGALLTTSATA 322
+NLG L+ S A
Sbjct: 471 VNLGNLVIESKPA 483
>gi|74027249 tripartite motif-containing 33 protein isoform alpha
[Homo sapiens]
Length = 1127
Score = 91.3 bits (225), Expect = 3e-18
Identities = 86/373 (23%), Positives = 150/373 (40%), Gaps = 62/373 (16%)
Query: 8 PGPEVQPMDKQFLVCSICLDRYQC-----PKVLPCLHTFCERCL-----QNYIPA----- 52
PGP +D C++C Q PK+LPCLH+FC RCL Q +P
Sbjct: 115 PGPPASLLD----TCAVCQQSLQSRREAEPKLLPCLHSFCLRCLPEPERQLSVPIPGGSN 170
Query: 53 ----QSLTLSCPVCRQ---------------TSILP-------EQGVSALQNN------- 79
Q + CPVCRQ TS P EQ ++ ++N
Sbjct: 171 GDIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSEAPSSSDEKSEQVCTSCEDNASAVGFC 230
Query: 80 -----FFISSLMEAMQQAP---DGAHDPEDPHPLSVVAG--RPLSCPNHEGKTMEFYCEA 129
+ + +EA Q+ D ++ SV A RP+ CP H+ + ++ +CE
Sbjct: 231 VECGEWLCKTCIEAHQRVKFTKDHLIRKKEDVSESVGASGQRPVFCPVHKQEQLKLFCET 290
Query: 130 CETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQ 189
C+ C +C+ EH+EH L + + K A++ L + + + A V ++
Sbjct: 291 CDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKLLEKKNYVHFAATQVQNRIKE 350
Query: 190 LQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIG 249
+ E +I A L + ++ ++L+ LE + +Q L Q + + +
Sbjct: 351 VNETNKRVEQEIKVAIFTLINEINKKGKSLLQQLENVTKERQMKLLQQQNDITGLSRQVK 410
Query: 250 SSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELVLEVDGLRRSV 309
+F A+ GS+ +L ++ + +L + P N + + ++V
Sbjct: 411 HVMNFTNWAIASGSSTALLYSKRLITFQLRHILKARCDPVPAANGAIRFHCDPTFWAKNV 470
Query: 310 LNLGALLTTSATA 322
+NLG L+ S A
Sbjct: 471 VNLGNLVIESKPA 483
>gi|19924163 muscle specific ring finger protein 1 [Homo sapiens]
Length = 353
Score = 89.7 bits (221), Expect = 9e-18
Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 29/268 (10%)
Query: 9 GPEVQPMDKQFLVCSICLDRYQCPKV-LPCLHTFCERCLQNYIPA---------QSLTLS 58
G ++ ++KQ L+C ICL+ + P V LPC H C +C + A S+++S
Sbjct: 11 GNPMENLEKQ-LICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSVSMS 69
Query: 59 -----CPVCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPL 113
CP CR I+ GV LQ N + ++++ +Q + HP+
Sbjct: 70 GGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGSHPM-------- 121
Query: 114 SCPNHEGKTMEFYCEACETAMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVRGR 172
C HE + + YC CE C C+ G H+ L+ V + K L + +
Sbjct: 122 -CKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAG 180
Query: 173 LPQLSAAIALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQK 232
++ I + + +E + ++S F+ L L ++K L L+ I ++K
Sbjct: 181 NDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSEL---LQRITQEQEK 237
Query: 233 VLQSQLDTLRQGQEHIGSSCSFAEQALR 260
L ++Q QE + S E A++
Sbjct: 238 KLSFIEALIQQYQEQLDKSTKLVETAIQ 265
>gi|27436877 tripartite motif-containing 59 [Homo sapiens]
Length = 403
Score = 88.6 bits (218), Expect = 2e-17
Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 32/241 (13%)
Query: 20 LVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQS---------LTLSCPVCRQTSILPE 70
L C IC ++ P+VLPC HTFC CL+N + A + L CP CR + +
Sbjct: 8 LTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCRSITEIAP 67
Query: 71 QGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCEAC 130
G+ +L NF + +++E QQ + HP V +CP H + + YC
Sbjct: 68 TGIESLPVNFALRAIIEKYQQ---------EDHPDIV------TCPEHYRQPLNVYCLLD 112
Query: 131 ETAMCGEC-RAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGR----LPQLSAAIALVGG 185
+ +CG C G+H H L+ + K Q+ LE + L L +
Sbjct: 113 KKLVCGHCLTIGQHHGHPIDDLQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKLKEQKS 172
Query: 186 ISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQ 245
S+++ + EA+ Q F++L L+Q+K++ ++ L + + Q++ +++ +
Sbjct: 173 HSEKMIQGDKEAVLQY---FKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERMKEIR 229
Query: 246 E 246
E
Sbjct: 230 E 230
>gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens]
Length = 452
Score = 87.8 bits (216), Expect = 3e-17
Identities = 66/296 (22%), Positives = 129/296 (43%), Gaps = 33/296 (11%)
Query: 11 EVQPMD--KQFLVCSICLDRYQCPKV-LPCLHTFCERCLQN-------YIPAQSLT---- 56
E Q MD ++ L+C ICL+ + P V LPC H C +C + Y+P + T
Sbjct: 13 EQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMAS 72
Query: 57 ---LSCPVCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPL 113
CP CR +L GV LQ N + ++++ +Q D +P+
Sbjct: 73 GGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD---------QPM 123
Query: 114 SCPNHEGKTMEFYCEACETAMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVRGR 172
C HE + + YC CE C C+ G H++ L V ++ K+ L + + G
Sbjct: 124 -CEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGS 182
Query: 173 LPQLSAAIALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQK 232
++ I+ + + ++E + ++ F+ L L++RK + + I +++
Sbjct: 183 NDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMT---QVITRTQEE 239
Query: 233 VLQSQLDTLRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAAL--AAQAF 286
L+ +++ +H+ + E ++ PE+ + ++ + L + A++AF
Sbjct: 240 KLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAF 295
>gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]
Length = 548
Score = 87.8 bits (216), Expect = 3e-17
Identities = 66/296 (22%), Positives = 129/296 (43%), Gaps = 33/296 (11%)
Query: 11 EVQPMD--KQFLVCSICLDRYQCPKV-LPCLHTFCERCLQN-------YIPAQSLT---- 56
E Q MD ++ L+C ICL+ + P V LPC H C +C + Y+P + T
Sbjct: 13 EQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMAS 72
Query: 57 ---LSCPVCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPL 113
CP CR +L GV LQ N + ++++ +Q D +P+
Sbjct: 73 GGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD---------QPM 123
Query: 114 SCPNHEGKTMEFYCEACETAMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVRGR 172
C HE + + YC CE C C+ G H++ L V ++ K+ L + + G
Sbjct: 124 -CEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGS 182
Query: 173 LPQLSAAIALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQK 232
++ I+ + + ++E + ++ F+ L L++RK + + I +++
Sbjct: 183 NDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMT---QVITRTQEE 239
Query: 233 VLQSQLDTLRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAAL--AAQAF 286
L+ +++ +H+ + E ++ PE+ + ++ + L + A++AF
Sbjct: 240 KLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAF 295
>gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]
Length = 540
Score = 87.8 bits (216), Expect = 3e-17
Identities = 66/296 (22%), Positives = 129/296 (43%), Gaps = 33/296 (11%)
Query: 11 EVQPMD--KQFLVCSICLDRYQCPKV-LPCLHTFCERCLQN-------YIPAQSLT---- 56
E Q MD ++ L+C ICL+ + P V LPC H C +C + Y+P + T
Sbjct: 13 EQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGTTMAS 72
Query: 57 ---LSCPVCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPL 113
CP CR +L GV LQ N + ++++ +Q D +P+
Sbjct: 73 GGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSD---------QPM 123
Query: 114 SCPNHEGKTMEFYCEACETAMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVRGR 172
C HE + + YC CE C C+ G H++ L V ++ K+ L + + G
Sbjct: 124 -CEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGS 182
Query: 173 LPQLSAAIALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQK 232
++ I+ + + ++E + ++ F+ L L++RK + + I +++
Sbjct: 183 NDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMT---QVITRTQEE 239
Query: 233 VLQSQLDTLRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAAL--AAQAF 286
L+ +++ +H+ + E ++ PE+ + ++ + L + A++AF
Sbjct: 240 KLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAF 295
>gi|38679905 tripartite motif-containing 65 [Homo sapiens]
Length = 517
Score = 86.7 bits (213), Expect = 7e-17
Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 20 LVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSILPEQGVSALQNN 79
L C+ICL YQ P LPC H FC C++++ +CP CR+ P + L+ N
Sbjct: 10 LTCAICLGLYQDPVTLPCGHNFCGACIRDW--WDRCGKACPECRE----PFPDGAELRRN 63
Query: 80 FFISSLMEAMQQAPDGAHDP-EDPHPLSVVAGRPLSCPNHEGKTMEFYCEACETAMCGEC 138
+S ++E ++ P A DP DP P A R CP H G+ +E +C +C C
Sbjct: 64 VALSGVLEVVRAGP--ARDPGPDPGPGPDPAAR---CPRH-GRPLELFCRTEGRCVCSVC 117
Query: 139 RAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKAEAL 198
E R H LL + +A L+ LE + + Q + + S Q+Q
Sbjct: 118 TVRECRLHERALLDAERLKREAQLRASLEVTQQQATQAEGQLLELRKQSSQIQNSACILA 177
Query: 199 AQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHI 248
+ +S F L QAL+ + + +E AK + L D ++ + H+
Sbjct: 178 SWVSGKFSSLLQALEIQHTTALRSIEV---AKTQALAQARDEEQRLRVHL 224
>gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]
Length = 400
Score = 86.7 bits (213), Expect = 7e-17
Identities = 81/329 (24%), Positives = 134/329 (40%), Gaps = 70/329 (21%)
Query: 15 MDKQFLVCSICLDRYQCPKV-LPCLHTFCERCLQNYIPAQ--------SLTLS------C 59
++KQ L+C ICL+ + P V LPC H C +C + A S T+S C
Sbjct: 20 LEKQ-LICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRC 78
Query: 60 PVCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHE 119
P CR +L GV LQ N + ++++ +Q E PL A + L C HE
Sbjct: 79 PSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQ--------ESSRPLHSKAEQHLMCEEHE 130
Query: 120 GKTMEFYCEACETAMCGECRA-GEHREHGTVLLRDVVEQHK---AALQRQLEAVRGR--- 172
+ + YC +CE C C+ G H++ L + ++ K L +LE
Sbjct: 131 EEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKKQDLTLLPRLECSGTNTTY 190
Query: 173 ----LP------------------QLSAAIA-LVGG-------------ISQQLQERKAE 196
LP +LS IA LV G + Q +++
Sbjct: 191 CSLDLPSSSDPPILASQNTKIIDSELSDGIAMLVAGNDRVQAVITQMEEVCQTIEDNSRR 250
Query: 197 ALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIGSSCSFAE 256
++ FE L L++RK L L+ + +++ LQ +RQ +H+ +S E
Sbjct: 251 QKQLLNQRFESLCAVLEERKGEL---LQALAREQEEKLQRVRGLIRQYGDHLEASSKLVE 307
Query: 257 QALRLGSAPEVLLVRKHMRERLAALAAQA 285
A++ P++ L + +E + + A +
Sbjct: 308 SAIQSMEEPQMALYLQQAKELINKVGAMS 336
>gi|47419911 transcriptional intermediary factor 1 alpha isoform a
[Homo sapiens]
Length = 1050
Score = 84.7 bits (208), Expect = 3e-16
Identities = 79/377 (20%), Positives = 146/377 (38%), Gaps = 90/377 (23%)
Query: 22 CSICLDRYQ--CPKVLPCLHTFCERCL---QNYI--PAQSL------------------- 55
C++C Q PK+LPCLH+FC+RCL Q Y+ PA L
Sbjct: 56 CAVCHQNIQSRAPKLLPCLHSFCQRCLPAPQRYLMLPAPMLGSAETPPPVPAPGSPVSGS 115
Query: 56 --------TLSCPVCRQTSILPEQGVSALQNNFFI-------SSLMEAMQQAPDGAHDPE 100
+ CPVC Q E + +NFF+ SS +E Q D
Sbjct: 116 SPFATQVGVIRCPVCSQ-----ECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNA 170
Query: 101 D--------------------------------------PHPLSVVAGRPLSCPNHEGKT 122
+ P + V + RP+ CP H+ +
Sbjct: 171 EANGFCVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPFHKKEQ 230
Query: 123 MEFYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIAL 182
++ YCE C+ C +C+ EH+EH + + + K + + + + +
Sbjct: 231 LKLYCETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIDTLITKLMEKTKYIKFTGNQ 290
Query: 183 VGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETIC-GAKQKVLQSQLDT- 240
+ ++ + + + I A L + ++ +AL+ LE++ + K++Q Q +
Sbjct: 291 IQNRIIEVNQNQKQVEQDIKVAIFTLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVA 350
Query: 241 -LRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELV 299
L + EH+ F++ A+ GS+ +L ++ + RL L P N ++
Sbjct: 351 GLSKQLEHV---MHFSKWAVSSGSSTALLYSKRLITYRLRHLLRARCDASPVTNNTIQFH 407
Query: 300 LEVDGLRRSVLNLGALL 316
+ ++++NLG+L+
Sbjct: 408 CDPSFWAQNIINLGSLV 424
>gi|47419909 transcriptional intermediary factor 1 alpha isoform b
[Homo sapiens]
Length = 1016
Score = 84.7 bits (208), Expect = 3e-16
Identities = 79/377 (20%), Positives = 146/377 (38%), Gaps = 90/377 (23%)
Query: 22 CSICLDRYQ--CPKVLPCLHTFCERCL---QNYI--PAQSL------------------- 55
C++C Q PK+LPCLH+FC+RCL Q Y+ PA L
Sbjct: 56 CAVCHQNIQSRAPKLLPCLHSFCQRCLPAPQRYLMLPAPMLGSAETPPPVPAPGSPVSGS 115
Query: 56 --------TLSCPVCRQTSILPEQGVSALQNNFFI-------SSLMEAMQQAPDGAHDPE 100
+ CPVC Q E + +NFF+ SS +E Q D
Sbjct: 116 SPFATQVGVIRCPVCSQ-----ECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNA 170
Query: 101 D--------------------------------------PHPLSVVAGRPLSCPNHEGKT 122
+ P + V + RP+ CP H+ +
Sbjct: 171 EANGFCVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPFHKKEQ 230
Query: 123 MEFYCEACETAMCGECRAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIAL 182
++ YCE C+ C +C+ EH+EH + + + K + + + + +
Sbjct: 231 LKLYCETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIDTLITKLMEKTKYIKFTGNQ 290
Query: 183 VGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETIC-GAKQKVLQSQLDT- 240
+ ++ + + + I A L + ++ +AL+ LE++ + K++Q Q +
Sbjct: 291 IQNRIIEVNQNQKQVEQDIKVAIFTLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVA 350
Query: 241 -LRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQAFPERPHENAQLELV 299
L + EH+ F++ A+ GS+ +L ++ + RL L P N ++
Sbjct: 351 GLSKQLEHV---MHFSKWAVSSGSSTALLYSKRLITYRLRHLLRARCDASPVTNNTIQFH 407
Query: 300 LEVDGLRRSVLNLGALL 316
+ ++++NLG+L+
Sbjct: 408 CDPSFWAQNIINLGSLV 424
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 82.8 bits (203), Expect = 1e-15
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 22 CSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSILPEQGVSALQNNFF 81
CS+CL+ + P ++ C H FC+ C+ + CPVCR+TS +L+ N
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTS-----RYRSLRPNRQ 83
Query: 82 ISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCEACETAMCGECRAG 141
+ S++E +Q D CP H + + +C + A+C C
Sbjct: 84 LGSMVEIAKQLQAVKRKIRDES----------LCPQHH-EALSLFCYEDQEAVCLICAIS 132
Query: 142 E-HREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKAEALAQ 200
HR H V L D +++K LQ+ LE + +L +++ + +L+ Q
Sbjct: 133 HTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQ 192
Query: 201 ISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIG 249
I FE+L + L + +Q L+S LE +Q +LQ LR+ H+G
Sbjct: 193 ILREFEELHRRLDEEQQVLLSRLEE---EEQDILQ----RLRENAAHLG 234
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 82.8 bits (203), Expect = 1e-15
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 22 CSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSILPEQGVSALQNNFF 81
CS+CL+ + P ++ C H FC+ C+ + CPVCR+TS +L+ N
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTS-----RYRSLRPNRQ 83
Query: 82 ISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCEACETAMCGECRAG 141
+ S++E +Q D CP H + + +C + A+C C
Sbjct: 84 LGSMVEIAKQLQAVKRKIRDES----------LCPQHH-EALSLFCYEDQEAVCLICAIS 132
Query: 142 E-HREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKAEALAQ 200
HR H V L D +++K LQ+ LE + +L +++ + +L+ Q
Sbjct: 133 HTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEITRCKSSEEKKPGELKRLVESRRQQ 192
Query: 201 ISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIG 249
I FE+L + L + +Q L+S LE +Q +LQ LR+ H+G
Sbjct: 193 ILREFEELHRRLDEEQQVLLSRLEE---EEQDILQ----RLRENAAHLG 234
>gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens]
Length = 410
Score = 82.4 bits (202), Expect = 1e-15
Identities = 67/288 (23%), Positives = 124/288 (43%), Gaps = 29/288 (10%)
Query: 11 EVQPMDKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPA-------QSLTLSCPVCR 63
+V + ++ L C IC + P+VLPC H FC++CL+ + + CP CR
Sbjct: 2 DVMELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCR 61
Query: 64 QTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTM 123
+ + G+++LQ N+ + ++E + + + P+ C H G+ +
Sbjct: 62 KET--SATGINSLQVNYSLKGIVEKYNK-------------IKISPKMPV-CKGHLGQPL 105
Query: 124 EFYCEACETAMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVR--GRLPQLSAAI 180
+C +CG C GEH +H + D Q + A + ++ R LS
Sbjct: 106 NIFCLTDMQLICGICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLD 165
Query: 181 ALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDT 240
L + LQ ++ ++ FE L+ L Q+K ++SD ET+ A + +++
Sbjct: 166 TLETSKRKSLQLLTKDS-DKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINK 224
Query: 241 LRQGQEHIGSSCSFAEQALRLGSAPEVLLVR-KHMRERLAALAAQAFP 287
L + + + AE A + S P V L + + RE++ + P
Sbjct: 225 LNTILQEQRMAFNIAE-AFKDVSEPIVFLQQMQEFREKIKVIKETPLP 271
>gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 81.3 bits (199), Expect = 3e-15
Identities = 66/279 (23%), Positives = 119/279 (42%), Gaps = 29/279 (10%)
Query: 20 LVCSICLDRYQCPKVLPCLHTFCERCLQNYIPA-------QSLTLSCPVCRQTSILPEQG 72
L C IC + P+VLPC H FC++CL+ + + CP CR+ + G
Sbjct: 8 LTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKET--SATG 65
Query: 73 VSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCEACET 132
+++LQ N+ + ++E + + + P+ C H G+ + +C
Sbjct: 66 INSLQVNYSLKGIVEKYNK-------------IKISPKMPV-CKGHLGQPLNIFCLTDMQ 111
Query: 133 AMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVR--GRLPQLSAAIALVGGISQQ 189
+CG C GEH +H + D Q + A + ++ R LS L +
Sbjct: 112 LICGICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKS 171
Query: 190 LQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIG 249
LQ ++ ++ FE L+ L Q+K ++SD ET+ A + +++ L +
Sbjct: 172 LQLLTKDS-DKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQR 230
Query: 250 SSCSFAEQALRLGSAPEVLLVR-KHMRERLAALAAQAFP 287
+ + AE A + S P V L + + RE++ + P
Sbjct: 231 MAFNIAE-AFKDVSEPIVFLQQMQEFREKIKVIKETPLP 268
>gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 81.3 bits (199), Expect = 3e-15
Identities = 66/279 (23%), Positives = 119/279 (42%), Gaps = 29/279 (10%)
Query: 20 LVCSICLDRYQCPKVLPCLHTFCERCLQNYIPA-------QSLTLSCPVCRQTSILPEQG 72
L C IC + P+VLPC H FC++CL+ + + CP CR+ + G
Sbjct: 8 LTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKET--SATG 65
Query: 73 VSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCEACET 132
+++LQ N+ + ++E + + + P+ C H G+ + +C
Sbjct: 66 INSLQVNYSLKGIVEKYNK-------------IKISPKMPV-CKGHLGQPLNIFCLTDMQ 111
Query: 133 AMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVR--GRLPQLSAAIALVGGISQQ 189
+CG C GEH +H + D Q + A + ++ R LS L +
Sbjct: 112 LICGICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKS 171
Query: 190 LQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIG 249
LQ ++ ++ FE L+ L Q+K ++SD ET+ A + +++ L +
Sbjct: 172 LQLLTKDS-DKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQR 230
Query: 250 SSCSFAEQALRLGSAPEVLLVR-KHMRERLAALAAQAFP 287
+ + AE A + S P V L + + RE++ + P
Sbjct: 231 MAFNIAE-AFKDVSEPIVFLQQMQEFREKIKVIKETPLP 268
>gi|47132521 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 81.3 bits (199), Expect = 3e-15
Identities = 66/279 (23%), Positives = 119/279 (42%), Gaps = 29/279 (10%)
Query: 20 LVCSICLDRYQCPKVLPCLHTFCERCLQNYIPA-------QSLTLSCPVCRQTSILPEQG 72
L C IC + P+VLPC H FC++CL+ + + CP CR+ + G
Sbjct: 8 LTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKET--SATG 65
Query: 73 VSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCEACET 132
+++LQ N+ + ++E + + + P+ C H G+ + +C
Sbjct: 66 INSLQVNYSLKGIVEKYNK-------------IKISPKMPV-CKGHLGQPLNIFCLTDMQ 111
Query: 133 AMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVR--GRLPQLSAAIALVGGISQQ 189
+CG C GEH +H + D Q + A + ++ R LS L +
Sbjct: 112 LICGICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKS 171
Query: 190 LQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIG 249
LQ ++ ++ FE L+ L Q+K ++SD ET+ A + +++ L +
Sbjct: 172 LQLLTKDS-DKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQR 230
Query: 250 SSCSFAEQALRLGSAPEVLLVR-KHMRERLAALAAQAFP 287
+ + AE A + S P V L + + RE++ + P
Sbjct: 231 MAFNIAE-AFKDVSEPIVFLQQMQEFREKIKVIKETPLP 268
>gi|5032179 tripartite motif-containing 28 protein [Homo sapiens]
Length = 835
Score = 79.0 bits (193), Expect = 2e-14
Identities = 73/326 (22%), Positives = 125/326 (38%), Gaps = 60/326 (18%)
Query: 22 CSICLDRYQC---PKVLPCLHTFCERCLQNYIPA------------QSLTLSCPVCRQTS 66
C +C +R + P++LPCLH+ C CL PA + CPVC+Q
Sbjct: 65 CGVCRERLRPEREPRLLPCLHSACSACLGPAAPAAANSSGDGGAAGDGTVVDCPVCKQQC 124
Query: 67 ILPEQGVSALQNNFFISSLMEAMQQAPDG---AHDPEDPHPLS---VVAGRPLS------ 114
+ ++N F S +A A D ED P + V PL
Sbjct: 125 FSKD----IVENYFMRDSGSKAATDAQDANQCCTSCEDNAPATSYCVECSEPLCETCVEA 180
Query: 115 ----------------------------CPNHEGKTMEFYCEACETAMCGECRAGEHREH 146
C H+ + + +CE+C+T C +C+ H++H
Sbjct: 181 HQRVKYTKDHTVRSTGPAKSRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDH 240
Query: 147 GTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKAEALAQISAAFE 206
L D V + L ++ + + L + V +Q+ + + + A
Sbjct: 241 QYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAIL 300
Query: 207 DLEQALQQRKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIGSSCSFAEQALRLGSAPE 266
+ + L +R + LV+D + + +Q+ L+ Q T+ + Q+H FA AL +
Sbjct: 301 QIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNTA 360
Query: 267 VLLVRKHMRERL-AALAAQAFPERPH 291
+LL +K + +L AL P PH
Sbjct: 361 LLLSKKLIYFQLHRALKMIVDPVEPH 386
>gi|217035095 tripartite motif-containing 62 [Homo sapiens]
Length = 475
Score = 75.9 bits (185), Expect = 1e-13
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 30/241 (12%)
Query: 17 KQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSL--TLSCPVCRQTSILPEQGVS 74
K L+CSICL YQ P L C H FC RC+ + Q CP CR+T P
Sbjct: 6 KDELLCSICLSIYQDPVSLGCEHYFCRRCITEHWVRQEAQGARDCPECRRTFAEP----- 60
Query: 75 ALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCEACETAM 134
AL + +++++E P A ++ R + P ++ +C +
Sbjct: 61 ALAPSLKLANIVERYSSFPLDA----------ILNARRAARPCQAHDKVKLFCLTDRALL 110
Query: 135 CGEC-RAGEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQER 193
C C H +H + D ++ + L+ QL+A++ + + A+ L + +QL E
Sbjct: 111 CFFCDEPALHEQHQVTGIDDAFDELQRELKDQLQALQDSEREHTEALQL---LKRQLAET 167
Query: 194 KAEALA---QISAAFEDLEQALQQRKQALVSDLE-----TICGAKQKVLQSQLDTLRQGQ 245
K+ + I AFE L + L++R++A++ +LE T+ +QKV Q LR+ Q
Sbjct: 168 KSSTKSLRTTIGEAFERLHRLLRERQKAMLEELEADTARTLTDIEQKV-QRYSQQLRKVQ 226
Query: 246 E 246
E
Sbjct: 227 E 227
>gi|15208643 ADP-ribosylation factor domain protein 1 isoform gamma
[Homo sapiens]
Length = 546
Score = 74.3 bits (181), Expect = 4e-13
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 12/160 (7%)
Query: 20 LVCSICLDRY-----QCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSILPEQGVS 74
L C +C D + + P++L C HT C CL +P + CP RQ + L + GV
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTR-LPLHGRAIRCPFDRQVTDLGDSGVW 87
Query: 75 ALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCEACETAM 134
L+ NF + L+E +Q P G + + + + + C E YC C T +
Sbjct: 88 GLKKNFALLELLERLQNGPIGQYGAAE-ESIGISGESIIRCDEDEAHLASVYCTVCATHL 146
Query: 135 CGECRAGEH-----REHGTVLLRDVVEQHKAALQRQLEAV 169
C EC H +H V L D + Q Q+ A+
Sbjct: 147 CSECSQVTHSTKTLAKHRRVPLADKPHEKTMCSQHQVHAI 186
>gi|15208641 ADP-ribosylation factor domain protein 1 isoform beta
[Homo sapiens]
Length = 569
Score = 74.3 bits (181), Expect = 4e-13
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 12/160 (7%)
Query: 20 LVCSICLDRY-----QCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSILPEQGVS 74
L C +C D + + P++L C HT C CL +P + CP RQ + L + GV
Sbjct: 29 LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTR-LPLHGRAIRCPFDRQVTDLGDSGVW 87
Query: 75 ALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHEGKTMEFYCEACETAM 134
L+ NF + L+E +Q P G + + + + + C E YC C T +
Sbjct: 88 GLKKNFALLELLERLQNGPIGQYGAAE-ESIGISGESIIRCDEDEAHLASVYCTVCATHL 146
Query: 135 CGECRAGEH-----REHGTVLLRDVVEQHKAALQRQLEAV 169
C EC H +H V L D + Q Q+ A+
Sbjct: 147 CSECSQVTHSTKTLAKHRRVPLADKPHEKTMCSQHQVHAI 186
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,248,033
Number of Sequences: 37866
Number of extensions: 1495994
Number of successful extensions: 5525
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 247
Number of HSP's that attempted gapping in prelim test: 4541
Number of HSP's gapped (non-prelim): 866
length of query: 744
length of database: 18,247,518
effective HSP length: 110
effective length of query: 634
effective length of database: 14,082,258
effective search space: 8928151572
effective search space used: 8928151572
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.