TRIM65 27128

Name: TRIM65	Sequence: fasta or formatted (517aa)		NCBI GI: 38679905
Description: tripartite motif-containing 65		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.9 41 2 C cysteine 4.8 25 1 D aspartate 4.1 21 1 E glutamate 7.0 36 2 F phenylalanine 2.7 14 1 G glycine 7.7 40 2 H histidine 3.1 16 2 I isoleucine 1.5 8 1 K lysine 1.9 10 1 L leucine 13.9 72 3 M methionine 0.4 2 1 N asparagine 1.7 9 1 P proline 8.3 43 2 Q glutamine 8.3 43 3 R arginine 7.9 41 2 S serine 5.6 29 2 T threonine 4.1 21 2 V valine 5.6 29 2 W tryptophan 1.9 10 2 Y tyrosine 1.4 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 65 TRIM7 0.107 tripartite motif-containing 7 isoform 1 TRIM25 0.099 tripartite motif-containing 25 TRIM11 0.098 tripartite motif-containing 11 TRIM58 0.095 tripartite motif-containing 58 TRIM39 0.085 tripartite motif-containing 39 isoform 1 TRIM17 0.085 tripartite motif-containing 17 isoform 1 TRIM17 0.085 tripartite motif-containing 17 isoform 1 TRIM75 0.083 tripartite motif-containing 75 TRIM39 0.082 tripartite motif-containing 39 isoform 2 TRIM27 0.079 ret finger protein TRIM4 0.079 tripartite motif protein TRIM4 isoform alpha TRIM4 0.077 tripartite motif protein TRIM4 isoform beta TRIM14 0.074 tripartite motif protein TRIM14 isoform alpha TRIM14 0.074 tripartite motif protein TRIM14 isoform alpha TRIM14 0.074 tripartite motif protein TRIM14 isoform alpha TRIM6 0.074 tripartite motif-containing 6 isoform 2 TRIM6 0.074 tripartite motif-containing 6 isoform 1 TRIM21 0.072 tripartite motif protein 21 TRIM62 0.071 tripartite motif-containing 62 TRIM7 0.071 tripartite motif-containing 7 isoform 4 TRIM17 0.070 tripartite motif-containing 17 isoform 3 TRIM10 0.068 tripartite motif-containing 10 isoform 1 TRIM69 0.068 tripartite motif-containing 69 isoform a TRIM68 0.065 ring finger protein 137 TRIM5 0.064 tripartite motif protein TRIM5 isoform delta TRIM5 0.064 tripartite motif protein TRIM5 isoform gamma TRIM17 0.063 tripartite motif-containing 17 isoform 2 TRIM34 0.062 tripartite motif protein 34 isoform 1 TRIM34 0.062 tripartite motif protein 34 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.