Guide to the Human Genome
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Search of human proteins with 31982943

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31982943 forkhead box P3 isoform a [Homo sapiens]
         (431 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31982943 forkhead box P3 isoform a [Homo sapiens]                  895   0.0  
gi|167466190 forkhead box P3 isoform b [Homo sapiens]                 805   0.0  
gi|18644886 forkhead box P1 isoform 1 [Homo sapiens]                  231   1e-60
gi|17017963 forkhead box P2 isoform I [Homo sapiens]                  221   1e-57
gi|22538413 forkhead box P2 isoform III [Homo sapiens]                221   1e-57
gi|149999352 forkhead box P2 isoform II [Homo sapiens]                221   1e-57
gi|29789367 forkhead box P4 isoform 2 [Homo sapiens]                  220   2e-57
gi|60498992 forkhead box P4 isoform 3 [Homo sapiens]                  218   6e-57
gi|60498989 forkhead box P4 isoform 1 [Homo sapiens]                  218   6e-57
gi|50345831 forkhead box J3 [Homo sapiens]                             85   1e-16
gi|8923842 forkhead box J2 [Homo sapiens]                              84   2e-16
gi|146232000 checkpoint suppressor 1 isoform 1 [Homo sapiens]          82   1e-15
gi|51093865 checkpoint suppressor 1 isoform 2 [Homo sapiens]           82   1e-15
gi|50301236 forkhead box J1 [Homo sapiens]                             82   1e-15
gi|4885237 forkhead box C2 [Homo sapiens]                              80   5e-15
gi|11386197 forkhead box E3 [Homo sapiens]                             79   6e-15
gi|22779860 forkhead box L1 [Homo sapiens]                             79   6e-15
gi|119395716 forkhead box C1 [Homo sapiens]                            79   1e-14
gi|208431824 forkhead box I3 [Homo sapiens]                            78   2e-14
gi|21618325 forkhead box E1 [Homo sapiens]                             77   2e-14
gi|32307177 forkhead box G1 [Homo sapiens]                             77   2e-14
gi|134142824 forkhead box D2 [Homo sapiens]                            77   3e-14
gi|12751477 forkhead box L2 [Homo sapiens]                             77   4e-14
gi|24497501 forkhead box A1 [Homo sapiens]                             76   5e-14
gi|31563338 forkhead box K2 [Homo sapiens]                             75   9e-14
gi|110735445 forkhead box F1 [Homo sapiens]                            75   1e-13
gi|195947376 forkhead box I2 [Homo sapiens]                            75   1e-13
gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]                   75   1e-13
gi|21618327 forkhead box I1 isoform a [Homo sapiens]                   75   1e-13
gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]                  75   1e-13

>gi|31982943 forkhead box P3 isoform a [Homo sapiens]
          Length = 431

 Score =  895 bits (2312), Expect = 0.0
 Identities = 431/431 (100%), Positives = 431/431 (100%)

Query: 1   MPNPRPGKPSAPSLALGPSPGASPSWRAAPKASDLLGARGPGGTFQGRDLRGGAHASSSS 60
           MPNPRPGKPSAPSLALGPSPGASPSWRAAPKASDLLGARGPGGTFQGRDLRGGAHASSSS
Sbjct: 1   MPNPRPGKPSAPSLALGPSPGASPSWRAAPKASDLLGARGPGGTFQGRDLRGGAHASSSS 60

Query: 61  LNPMPPSQLQLPTLPLVMVAPSGARLGPLPHLQALLQDRPHFMHQLSTVDAHARTPVLQV 120
           LNPMPPSQLQLPTLPLVMVAPSGARLGPLPHLQALLQDRPHFMHQLSTVDAHARTPVLQV
Sbjct: 61  LNPMPPSQLQLPTLPLVMVAPSGARLGPLPHLQALLQDRPHFMHQLSTVDAHARTPVLQV 120

Query: 121 HPLESPAMISLTPPTTATGVFSLKARPGLPPGINVASLEWVSREPALLCTFPNPSAPRKD 180
           HPLESPAMISLTPPTTATGVFSLKARPGLPPGINVASLEWVSREPALLCTFPNPSAPRKD
Sbjct: 121 HPLESPAMISLTPPTTATGVFSLKARPGLPPGINVASLEWVSREPALLCTFPNPSAPRKD 180

Query: 181 STLSAVPQSSYPLLANGVCKWPGCEKVFEEPEDFLKHCQADHLLDEKGRAQCLLQREMVQ 240
           STLSAVPQSSYPLLANGVCKWPGCEKVFEEPEDFLKHCQADHLLDEKGRAQCLLQREMVQ
Sbjct: 181 STLSAVPQSSYPLLANGVCKWPGCEKVFEEPEDFLKHCQADHLLDEKGRAQCLLQREMVQ 240

Query: 241 SLEQQLVLEKEKLSAMQAHLAGKMALTKASSVASSDKGSCCIVAAGSQGPVVPAWSGPRE 300
           SLEQQLVLEKEKLSAMQAHLAGKMALTKASSVASSDKGSCCIVAAGSQGPVVPAWSGPRE
Sbjct: 241 SLEQQLVLEKEKLSAMQAHLAGKMALTKASSVASSDKGSCCIVAAGSQGPVVPAWSGPRE 300

Query: 301 APDSLFAVRRHLWGSHGNSTFPEFLHNMDYFKFHNMRPPFTYATLIRWAILEAPEKQRTL 360
           APDSLFAVRRHLWGSHGNSTFPEFLHNMDYFKFHNMRPPFTYATLIRWAILEAPEKQRTL
Sbjct: 301 APDSLFAVRRHLWGSHGNSTFPEFLHNMDYFKFHNMRPPFTYATLIRWAILEAPEKQRTL 360

Query: 361 NEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFVRVESEKGAVWTVDELEFRKKRSQR 420
           NEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFVRVESEKGAVWTVDELEFRKKRSQR
Sbjct: 361 NEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFVRVESEKGAVWTVDELEFRKKRSQR 420

Query: 421 PSRCSNPTPGP 431
           PSRCSNPTPGP
Sbjct: 421 PSRCSNPTPGP 431


>gi|167466190 forkhead box P3 isoform b [Homo sapiens]
          Length = 396

 Score =  805 bits (2080), Expect = 0.0
 Identities = 396/431 (91%), Positives = 396/431 (91%), Gaps = 35/431 (8%)

Query: 1   MPNPRPGKPSAPSLALGPSPGASPSWRAAPKASDLLGARGPGGTFQGRDLRGGAHASSSS 60
           MPNPRPGKPSAPSLALGPSPGASPSWRAAPKASDLLGARGPGGTFQGRDLRGGAHASSSS
Sbjct: 1   MPNPRPGKPSAPSLALGPSPGASPSWRAAPKASDLLGARGPGGTFQGRDLRGGAHASSSS 60

Query: 61  LNPMPPSQLQLPTLPLVMVAPSGARLGPLPHLQALLQDRPHFMHQLSTVDAHARTPVLQV 120
           LNPMPPSQLQL                                   STVDAHARTPVLQV
Sbjct: 61  LNPMPPSQLQL-----------------------------------STVDAHARTPVLQV 85

Query: 121 HPLESPAMISLTPPTTATGVFSLKARPGLPPGINVASLEWVSREPALLCTFPNPSAPRKD 180
           HPLESPAMISLTPPTTATGVFSLKARPGLPPGINVASLEWVSREPALLCTFPNPSAPRKD
Sbjct: 86  HPLESPAMISLTPPTTATGVFSLKARPGLPPGINVASLEWVSREPALLCTFPNPSAPRKD 145

Query: 181 STLSAVPQSSYPLLANGVCKWPGCEKVFEEPEDFLKHCQADHLLDEKGRAQCLLQREMVQ 240
           STLSAVPQSSYPLLANGVCKWPGCEKVFEEPEDFLKHCQADHLLDEKGRAQCLLQREMVQ
Sbjct: 146 STLSAVPQSSYPLLANGVCKWPGCEKVFEEPEDFLKHCQADHLLDEKGRAQCLLQREMVQ 205

Query: 241 SLEQQLVLEKEKLSAMQAHLAGKMALTKASSVASSDKGSCCIVAAGSQGPVVPAWSGPRE 300
           SLEQQLVLEKEKLSAMQAHLAGKMALTKASSVASSDKGSCCIVAAGSQGPVVPAWSGPRE
Sbjct: 206 SLEQQLVLEKEKLSAMQAHLAGKMALTKASSVASSDKGSCCIVAAGSQGPVVPAWSGPRE 265

Query: 301 APDSLFAVRRHLWGSHGNSTFPEFLHNMDYFKFHNMRPPFTYATLIRWAILEAPEKQRTL 360
           APDSLFAVRRHLWGSHGNSTFPEFLHNMDYFKFHNMRPPFTYATLIRWAILEAPEKQRTL
Sbjct: 266 APDSLFAVRRHLWGSHGNSTFPEFLHNMDYFKFHNMRPPFTYATLIRWAILEAPEKQRTL 325

Query: 361 NEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFVRVESEKGAVWTVDELEFRKKRSQR 420
           NEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFVRVESEKGAVWTVDELEFRKKRSQR
Sbjct: 326 NEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFVRVESEKGAVWTVDELEFRKKRSQR 385

Query: 421 PSRCSNPTPGP 431
           PSRCSNPTPGP
Sbjct: 386 PSRCSNPTPGP 396


>gi|18644886 forkhead box P1 isoform 1 [Homo sapiens]
          Length = 677

 Score =  231 bits (588), Expect = 1e-60
 Identities = 125/271 (46%), Positives = 168/271 (61%), Gaps = 21/271 (7%)

Query: 177 PRKDSTLSAVPQSSYPLLANGVCKWPGCEKVFEEPEDFLKHCQADHLLDEKGRAQCLLQR 236
           P+++S        S+PL  +GVCKWPGCE V E+ + FLKH  ++H LD++  AQC +Q 
Sbjct: 286 PKRESLSHEEHPHSHPLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQM 345

Query: 237 EMVQSLEQQLVLEKEKLSAMQAHLAGKMALTKASSVASSDKGSCCIVAAGSQG------- 289
           ++VQ LE QL  +KE+L AM  HL  K    KA+    +   S  +  + S+        
Sbjct: 346 QVVQQLELQLAKDKERLQAMMTHLHVKSTEPKAAPQPLNLVSSVTLSKSASEASPQSLPH 405

Query: 290 -------PVVPAWSGPRE-APDSLFAV----RRHLWGSHGNSTFPEFLHNMDYFKFHNMR 337
                  P+ P   GP      S+  V    RR+    +   +  +   N +++K   +R
Sbjct: 406 TPTTPTAPLTPVTQGPSVITTTSMHTVGPIRRRYSDKYNVPISSADIAQNQEFYKNAEVR 465

Query: 338 PPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFVR 397
           PPFTYA+LIR AILE+PEKQ TLNEIY+WFTRMFA+FR + ATWKNA+RHNLSLHKCFVR
Sbjct: 466 PPFTYASLIRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVR 525

Query: 398 VESEKGAVWTVDELEFRKKRSQRPSRCSNPT 428
           VE+ KGAVWTVDE+EF+K+R Q+ S   NP+
Sbjct: 526 VENVKGAVWTVDEVEFQKRRPQKIS--GNPS 554


>gi|17017963 forkhead box P2 isoform I [Homo sapiens]
          Length = 715

 Score =  221 bits (563), Expect = 1e-57
 Identities = 119/261 (45%), Positives = 163/261 (62%), Gaps = 18/261 (6%)

Query: 178 RKDSTLSAVPQSSYPLLANGVCKWPGCEKVFEEPEDFLKHCQADHLLDEKGRAQCLLQRE 237
           R+DS+      +S+ L  +GVCKWPGCE + E+   FLKH   +H LD++  AQC +Q +
Sbjct: 327 RRDSSSHEETGASHTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQ 386

Query: 238 MVQSLEQQLVLEKEKLSAMQAHLAGKMALTKAS----SVASSDKGSCCIVAAGSQG---- 289
           +VQ LE QL  E+E+L AM  HL  + +  K S    ++ SS   S  ++    Q     
Sbjct: 387 VVQQLEIQLSKERERLQAMMTHLHMRPSEPKPSPKPLNLVSSVTMSKNMLETSPQSLPQT 446

Query: 290 ------PVVPAWSGPR----EAPDSLFAVRRHLWGSHGNSTFPEFLHNMDYFKFHNMRPP 339
                 PV P   GP      +  ++ A+RR     +      E   N +++K  ++RPP
Sbjct: 447 PTTPTAPVTPITQGPSVITPASVPNVGAIRRRHSDKYNIPMSSEIAPNYEFYKNADVRPP 506

Query: 340 FTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFVRVE 399
           FTYATLIR AI+E+ ++Q TLNEIY WFTR FA+FR + ATWKNA+RHNLSLHKCFVRVE
Sbjct: 507 FTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVE 566

Query: 400 SEKGAVWTVDELEFRKKRSQR 420
           + KGAVWTVDE+E++K+RSQ+
Sbjct: 567 NVKGAVWTVDEVEYQKRRSQK 587


>gi|22538413 forkhead box P2 isoform III [Homo sapiens]
          Length = 623

 Score =  221 bits (563), Expect = 1e-57
 Identities = 119/261 (45%), Positives = 163/261 (62%), Gaps = 18/261 (6%)

Query: 178 RKDSTLSAVPQSSYPLLANGVCKWPGCEKVFEEPEDFLKHCQADHLLDEKGRAQCLLQRE 237
           R+DS+      +S+ L  +GVCKWPGCE + E+   FLKH   +H LD++  AQC +Q +
Sbjct: 235 RRDSSSHEETGASHTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQ 294

Query: 238 MVQSLEQQLVLEKEKLSAMQAHLAGKMALTKAS----SVASSDKGSCCIVAAGSQG---- 289
           +VQ LE QL  E+E+L AM  HL  + +  K S    ++ SS   S  ++    Q     
Sbjct: 295 VVQQLEIQLSKERERLQAMMTHLHMRPSEPKPSPKPLNLVSSVTMSKNMLETSPQSLPQT 354

Query: 290 ------PVVPAWSGPR----EAPDSLFAVRRHLWGSHGNSTFPEFLHNMDYFKFHNMRPP 339
                 PV P   GP      +  ++ A+RR     +      E   N +++K  ++RPP
Sbjct: 355 PTTPTAPVTPITQGPSVITPASVPNVGAIRRRHSDKYNIPMSSEIAPNYEFYKNADVRPP 414

Query: 340 FTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFVRVE 399
           FTYATLIR AI+E+ ++Q TLNEIY WFTR FA+FR + ATWKNA+RHNLSLHKCFVRVE
Sbjct: 415 FTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVE 474

Query: 400 SEKGAVWTVDELEFRKKRSQR 420
           + KGAVWTVDE+E++K+RSQ+
Sbjct: 475 NVKGAVWTVDEVEYQKRRSQK 495


>gi|149999352 forkhead box P2 isoform II [Homo sapiens]
          Length = 740

 Score =  221 bits (563), Expect = 1e-57
 Identities = 119/261 (45%), Positives = 163/261 (62%), Gaps = 18/261 (6%)

Query: 178 RKDSTLSAVPQSSYPLLANGVCKWPGCEKVFEEPEDFLKHCQADHLLDEKGRAQCLLQRE 237
           R+DS+      +S+ L  +GVCKWPGCE + E+   FLKH   +H LD++  AQC +Q +
Sbjct: 352 RRDSSSHEETGASHTLYGHGVCKWPGCESICEDFGQFLKHLNNEHALDDRSTAQCRVQMQ 411

Query: 238 MVQSLEQQLVLEKEKLSAMQAHLAGKMALTKAS----SVASSDKGSCCIVAAGSQG---- 289
           +VQ LE QL  E+E+L AM  HL  + +  K S    ++ SS   S  ++    Q     
Sbjct: 412 VVQQLEIQLSKERERLQAMMTHLHMRPSEPKPSPKPLNLVSSVTMSKNMLETSPQSLPQT 471

Query: 290 ------PVVPAWSGPR----EAPDSLFAVRRHLWGSHGNSTFPEFLHNMDYFKFHNMRPP 339
                 PV P   GP      +  ++ A+RR     +      E   N +++K  ++RPP
Sbjct: 472 PTTPTAPVTPITQGPSVITPASVPNVGAIRRRHSDKYNIPMSSEIAPNYEFYKNADVRPP 531

Query: 340 FTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFVRVE 399
           FTYATLIR AI+E+ ++Q TLNEIY WFTR FA+FR + ATWKNA+RHNLSLHKCFVRVE
Sbjct: 532 FTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVE 591

Query: 400 SEKGAVWTVDELEFRKKRSQR 420
           + KGAVWTVDE+E++K+RSQ+
Sbjct: 592 NVKGAVWTVDEVEYQKRRSQK 612


>gi|29789367 forkhead box P4 isoform 2 [Homo sapiens]
          Length = 667

 Score =  220 bits (561), Expect = 2e-57
 Identities = 130/302 (43%), Positives = 177/302 (58%), Gaps = 21/302 (6%)

Query: 136 TATGVFSLKARPGLPPGINVASLEWVSREPALLCTFPNPSAPRKDSTLSAVPQSSYPLLA 195
           TA    S  A P + P ++  +L   + +P +L +       R+DS+       S+PL  
Sbjct: 254 TAATATSFAAPPKVSPPLSHHTLP--NGQPTVLTS-------RRDSSSHEETPGSHPLYG 304

Query: 196 NGVCKWPGCEKVFEEPEDFLKHCQADHLLDEKGRAQCLLQREMVQSLEQQLVLEKEKLSA 255
           +G CKWPGCE + E+   F+KH   +H LD++  AQC +Q ++VQ LE QL  E E+L A
Sbjct: 305 HGECKWPGCETLCEDLGQFIKHLNTEHALDDRSTAQCRVQMQVVQQLEIQLAKESERLQA 364

Query: 256 MQAHLAGKMALTKASS----VASSDKGSCCIV--AAGSQGPVVPAWSGPREAPDSLFA-- 307
           M AHL  + +  K  S    V+++D     +V     +  PV P    P     SL    
Sbjct: 365 MMAHLHMRPSEPKPFSQPVTVSAADSFPDGLVHPPTSAAAPVTPL-RPPGLGSASLHGGG 423

Query: 308 -VRRHLWGSHGNSTFPEFLHNMDYFKFHNMRPPFTYATLIRWAILEAPEKQRTLNEIYHW 366
             RR       +    E   N +++K  ++RPPFTYA+LIR AILE P++Q TLNEIY+W
Sbjct: 424 PARRRSSDKFCSPISSELAQNHEFYKNADVRPPFTYASLIRQAILETPDRQLTLNEIYNW 483

Query: 367 FTRMFAFFRNHPATWKNAIRHNLSLHKCFVRVESEKGAVWTVDELEFRKKRSQRPSRCSN 426
           FTRMFA+FR + ATWKNA+RHNLSLHKCFVRVE+ KGAVWTVDE E++K+R   P    +
Sbjct: 484 FTRMFAYFRRNTATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEREYQKRRP--PKMTGS 541

Query: 427 PT 428
           PT
Sbjct: 542 PT 543


>gi|60498992 forkhead box P4 isoform 3 [Homo sapiens]
          Length = 678

 Score =  218 bits (556), Expect = 6e-57
 Identities = 132/313 (42%), Positives = 177/313 (56%), Gaps = 31/313 (9%)

Query: 136 TATGVFSLKARPGLPPGINVASLEWVSREPALLCTFPNPSAPRKDSTLSAVPQSSYPLLA 195
           TA    S  A P + P ++  +L   + +P +L +       R+DS+       S+PL  
Sbjct: 253 TAATATSFAAPPKVSPPLSHHTLP--NGQPTVLTS-------RRDSSSHEETPGSHPLYG 303

Query: 196 NGVCKWPGCEKVFEEPEDFLKHCQADHLLDEKGRAQCLLQREMVQSLEQQLVLEKEKLSA 255
           +G CKWPGCE + E+   F+KH   +H LD++  AQC +Q ++VQ LE QL  E E+L A
Sbjct: 304 HGECKWPGCETLCEDLGQFIKHLNTEHALDDRSTAQCRVQMQVVQQLEIQLAKESERLQA 363

Query: 256 MQAHLAGKMALTKASSV------ASSDKGSCCIVAAGS--QGPVVPAWSGPREA----PD 303
           M AHL  + +  K  S        SS      + AA S   G V P  S         P 
Sbjct: 364 MMAHLHMRPSEPKPFSQPLNPVPGSSSFSKVTVSAADSFPDGLVHPPTSAAAPVTPLRPP 423

Query: 304 SLFAVRRHLWGSHGNSTFPEFL--------HNMDYFKFHNMRPPFTYATLIRWAILEAPE 355
            L +   H  G     +  +F          N +++K  ++RPPFTYA+LIR AILE P+
Sbjct: 424 GLGSASLHGGGPARRRSSDKFCSPISSELAQNHEFYKNADVRPPFTYASLIRQAILETPD 483

Query: 356 KQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFVRVESEKGAVWTVDELEFRK 415
           +Q TLNEIY+WFTRMFA+FR + ATWKNA+RHNLSLHKCFVRVE+ KGAVWTVDE E++K
Sbjct: 484 RQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEREYQK 543

Query: 416 KRSQRPSRCSNPT 428
           +R   P    +PT
Sbjct: 544 RRP--PKMTGSPT 554


>gi|60498989 forkhead box P4 isoform 1 [Homo sapiens]
          Length = 680

 Score =  218 bits (556), Expect = 6e-57
 Identities = 132/313 (42%), Positives = 177/313 (56%), Gaps = 31/313 (9%)

Query: 136 TATGVFSLKARPGLPPGINVASLEWVSREPALLCTFPNPSAPRKDSTLSAVPQSSYPLLA 195
           TA    S  A P + P ++  +L   + +P +L +       R+DS+       S+PL  
Sbjct: 255 TAATATSFAAPPKVSPPLSHHTLP--NGQPTVLTS-------RRDSSSHEETPGSHPLYG 305

Query: 196 NGVCKWPGCEKVFEEPEDFLKHCQADHLLDEKGRAQCLLQREMVQSLEQQLVLEKEKLSA 255
           +G CKWPGCE + E+   F+KH   +H LD++  AQC +Q ++VQ LE QL  E E+L A
Sbjct: 306 HGECKWPGCETLCEDLGQFIKHLNTEHALDDRSTAQCRVQMQVVQQLEIQLAKESERLQA 365

Query: 256 MQAHLAGKMALTKASSV------ASSDKGSCCIVAAGS--QGPVVPAWSGPREA----PD 303
           M AHL  + +  K  S        SS      + AA S   G V P  S         P 
Sbjct: 366 MMAHLHMRPSEPKPFSQPLNPVPGSSSFSKVTVSAADSFPDGLVHPPTSAAAPVTPLRPP 425

Query: 304 SLFAVRRHLWGSHGNSTFPEFL--------HNMDYFKFHNMRPPFTYATLIRWAILEAPE 355
            L +   H  G     +  +F          N +++K  ++RPPFTYA+LIR AILE P+
Sbjct: 426 GLGSASLHGGGPARRRSSDKFCSPISSELAQNHEFYKNADVRPPFTYASLIRQAILETPD 485

Query: 356 KQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFVRVESEKGAVWTVDELEFRK 415
           +Q TLNEIY+WFTRMFA+FR + ATWKNA+RHNLSLHKCFVRVE+ KGAVWTVDE E++K
Sbjct: 486 RQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEREYQK 545

Query: 416 KRSQRPSRCSNPT 428
           +R   P    +PT
Sbjct: 546 RRP--PKMTGSPT 556


>gi|50345831 forkhead box J3 [Homo sapiens]
          Length = 622

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 12/103 (11%)

Query: 337 RPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFV 396
           +PP++YA+LI +AI  +P+K+ TL+EIY W    F ++R   + WKN+IRHNLSL+KCF+
Sbjct: 78  KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFL 137

Query: 397 RV-----ESEKGAVWTVDE------LEFR-KKRSQRPSRCSNP 427
           +V     +  KG+ W +D       L  R KKR++   R S P
Sbjct: 138 KVPRSKDDPGKGSYWAIDTNPKEDVLPTRPKKRARSVERASTP 180


>gi|8923842 forkhead box J2 [Homo sapiens]
          Length = 574

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 7/114 (6%)

Query: 315 SHGNSTFPEFLHNMDYFKFH-NMRPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAF 373
           S G+ T P    + D    H + +P ++YATLI +AI  +P K+ TL+EIY W    F +
Sbjct: 43  SPGSPTDPNATLSKDEAAVHQDGKPRYSYATLITYAINSSPAKKMTLSEIYRWICDNFPY 102

Query: 374 FRNHPATWKNAIRHNLSLHKCFVRV-----ESEKGAVWTVDEL-EFRKKRSQRP 421
           ++N    WKN+IRHNLSL+KCF +V     +  KG+ WT+D   +  +KR   P
Sbjct: 103 YKNAGIGWKNSIRHNLSLNKCFRKVPRPRDDPGKGSYWTIDTCPDISRKRRHPP 156


>gi|146232000 checkpoint suppressor 1 isoform 1 [Homo sapiens]
          Length = 490

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 37/91 (40%), Positives = 59/91 (64%), Gaps = 7/91 (7%)

Query: 335 NMRPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKC 394
           N +PP++++ LI  AI ++P K+  + +IY+W    F +F N P  WKN++RHNLSL+KC
Sbjct: 112 NCKPPYSFSCLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTGWKNSVRHNLSLNKC 171

Query: 395 FVRVESE------KGAVWTVDELEFRKKRSQ 419
           F +V+ E      KG++W +D  E+R+   Q
Sbjct: 172 FKKVDKERSQSIGKGSLWCIDP-EYRQNLIQ 201


>gi|51093865 checkpoint suppressor 1 isoform 2 [Homo sapiens]
          Length = 468

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 37/91 (40%), Positives = 59/91 (64%), Gaps = 7/91 (7%)

Query: 335 NMRPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKC 394
           N +PP++++ LI  AI ++P K+  + +IY+W    F +F N P  WKN++RHNLSL+KC
Sbjct: 112 NCKPPYSFSCLIFMAIEDSPTKRLPVKDIYNWILEHFPYFANAPTGWKNSVRHNLSLNKC 171

Query: 395 FVRVESE------KGAVWTVDELEFRKKRSQ 419
           F +V+ E      KG++W +D  E+R+   Q
Sbjct: 172 FKKVDKERSQSIGKGSLWCIDP-EYRQNLIQ 201


>gi|50301236 forkhead box J1 [Homo sapiens]
          Length = 421

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 5/88 (5%)

Query: 327 NMDYFKFHNMRPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIR 386
           ++DY    +++PP++YATLI  A+  +   + TL+ IY W T  F +FR+   TW+N+IR
Sbjct: 111 DVDYATNPHVKPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQNSIR 170

Query: 387 HNLSLHKCFVRVESE-----KGAVWTVD 409
           HNLSL+KCF++V  E     KG  W +D
Sbjct: 171 HNLSLNKCFIKVPREKDEPGKGGFWRID 198


>gi|4885237 forkhead box C2 [Homo sapiens]
          Length = 501

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 13/131 (9%)

Query: 284 AAGSQGPVVPAWSGPREAPDSLFAVRRHLWGSHGNSTFPEFLHNMDYFKFHNMRPPFTYA 343
           AAGS G +         +P  +++     + +    ++  + H+        ++PP++Y 
Sbjct: 27  AAGSYGGMA--------SPMGVYSGHPEQYSAGMGRSYAPYHHHQPAAPKDLVKPPYSYI 78

Query: 344 TLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFVRVESE-- 401
            LI  AI  APEK+ TLN IY +    F F+R +   W+N+IRHNLSL++CFV+V  +  
Sbjct: 79  ALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDK 138

Query: 402 ---KGAVWTVD 409
              KG+ WT+D
Sbjct: 139 KPGKGSYWTLD 149


>gi|11386197 forkhead box E3 [Homo sapiens]
          Length = 319

 Score = 79.3 bits (194), Expect = 6e-15
 Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 19/113 (16%)

Query: 337 RPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFV 396
           +PP++Y  LI  A+  AP ++ TL  IY + T  FAF+R+ P  W+N+IRHNL+L+ CFV
Sbjct: 71  KPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRHNLTLNDCFV 130

Query: 397 RVESE-----KGAVWTVDE-----------LEFRK--KRSQRPSRCSNPTPGP 431
           +V  E     KG  WT+D            L  RK  KR++ P+  +   PGP
Sbjct: 131 KVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKRFKRAELPAHAA-AAPGP 182


>gi|22779860 forkhead box L1 [Homo sapiens]
          Length = 345

 Score = 79.3 bits (194), Expect = 6e-15
 Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 8/102 (7%)

Query: 337 RPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFV 396
           +PP++Y  LI  AI +APE++ TLN IY +    F F+ ++   W+N+IRHNLSL+ CFV
Sbjct: 49  KPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFV 108

Query: 397 RVESE-----KGAVWTVDE--LEFRKKRSQRPSRCSNPTPGP 431
           +V  E     KG+ WT+D   L+  +  + R  R   P PGP
Sbjct: 109 KVPREKGRPGKGSYWTLDPRCLDMFENGNYR-RRKRKPKPGP 149


>gi|119395716 forkhead box C1 [Homo sapiens]
          Length = 553

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 5/79 (6%)

Query: 336 MRPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCF 395
           ++PP++Y  LI  AI  AP+K+ TLN IY +    F F+R++   W+N+IRHNLSL++CF
Sbjct: 77  VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECF 136

Query: 396 VRVESE-----KGAVWTVD 409
           V+V  +     KG+ WT+D
Sbjct: 137 VKVPRDDKKPGKGSYWTLD 155


>gi|208431824 forkhead box I3 [Homo sapiens]
          Length = 420

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 43/104 (41%), Positives = 61/104 (58%), Gaps = 14/104 (13%)

Query: 336 MRPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCF 395
           +RPP++Y+ LI  AI  APE++ TL+ IY +    F F++   A W+N+IRHNLSL+ CF
Sbjct: 144 VRPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCF 203

Query: 396 VRVESE-----KGAVWTV--------DELEFRKKRSQRPSRCSN 426
            +V  +     KG  WT+        D   FR+KR +R S  SN
Sbjct: 204 KKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRR-SEASN 246


>gi|21618325 forkhead box E1 [Homo sapiens]
          Length = 373

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 5/78 (6%)

Query: 337 RPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFV 396
           +PP++Y  LI  AI  APE++ TL  IY + T  F F+R++P  W+N+IRHNL+L+ CF+
Sbjct: 53  KPPYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFL 112

Query: 397 RVESE-----KGAVWTVD 409
           ++  E     KG  W +D
Sbjct: 113 KIPREAGRPGKGNYWALD 130


>gi|32307177 forkhead box G1 [Homo sapiens]
          Length = 489

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 5/78 (6%)

Query: 337 RPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFV 396
           +PPF+Y  LI  AI ++PEK+ TLN IY +  + F ++R +   W+N+IRHNLSL+KCFV
Sbjct: 181 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFV 240

Query: 397 RV-----ESEKGAVWTVD 409
           +V     +  KG  W +D
Sbjct: 241 KVPRHYDDPGKGNYWMLD 258


>gi|134142824 forkhead box D2 [Homo sapiens]
          Length = 495

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 16/112 (14%)

Query: 336 MRPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCF 395
           ++PP++Y  LI  AIL++P+K+ TL+EI  + +  F ++R     W+N+IRHNLSL+ CF
Sbjct: 126 VKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCF 185

Query: 396 VRVESE-----KGAVWTVDE-----------LEFRKKRSQRPSRCSNPTPGP 431
           V++  E     KG  WT+D            L  RK+  ++P    +P P P
Sbjct: 186 VKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHP 237


>gi|12751477 forkhead box L2 [Homo sapiens]
          Length = 376

 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 8/103 (7%)

Query: 337 RPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFV 396
           +PP++Y  LI  AI E+ EK+ TL+ IY +    F F+  +   W+N+IRHNLSL++CF+
Sbjct: 54  KPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFI 113

Query: 397 RVESE-----KGAVWTVD---ELEFRKKRSQRPSRCSNPTPGP 431
           +V  E     KG  WT+D   E  F K   +R  R   P   P
Sbjct: 114 KVPREGGGERKGNYWTLDPACEDMFEKGNYRRRRRMKRPFRPP 156


>gi|24497501 forkhead box A1 [Homo sapiens]
          Length = 472

 Score = 76.3 bits (186), Expect = 5e-14
 Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 5/81 (6%)

Query: 333 FHNMRPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLH 392
           + + +PP++Y +LI  AI +AP K  TL+EIY W   +F ++R +   W+N+IRH+LS +
Sbjct: 166 YPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFN 225

Query: 393 KCFVRV-----ESEKGAVWTV 408
            CFV+V     +  KG+ WT+
Sbjct: 226 DCFVKVARSPDKPGKGSYWTL 246


>gi|31563338 forkhead box K2 [Homo sapiens]
          Length = 660

 Score = 75.5 bits (184), Expect = 9e-14
 Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 14/108 (12%)

Query: 337 RPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFV 396
           +PP++YA LI  AI  AP+KQ TLN IY   T+ + ++R     W+N+IRHNLSL++ F+
Sbjct: 258 KPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFI 317

Query: 397 RV-----ESEKGAVWTVD--------ELEFRKKRSQRPSRCSNPTPGP 431
           +V     E  KG+ W +D        E  FRK+R  R   C     GP
Sbjct: 318 KVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRR-PRGVPCFRTPLGP 364


>gi|110735445 forkhead box F1 [Homo sapiens]
          Length = 379

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 45/129 (34%), Positives = 64/129 (49%), Gaps = 29/129 (22%)

Query: 286 GSQGPVVPAWSGPREAPDSLFAVRRHLWGSHGNSTFPEFLHNMDYFKFHNMRPPFTYATL 345
           G    + PA SGP +A  +   +RR           PE             +PP++Y  L
Sbjct: 21  GGGAAMDPASSGPSKAKKTNAGIRR-----------PE-------------KPPYSYIAL 56

Query: 346 IRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCFVRV-----ES 400
           I  AI  +P K+ TL+EIY +    F FFR     WKN++RHNLSL++CF+++       
Sbjct: 57  IVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRP 116

Query: 401 EKGAVWTVD 409
            KG  WT+D
Sbjct: 117 GKGHYWTID 125


>gi|195947376 forkhead box I2 [Homo sapiens]
          Length = 318

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 13/98 (13%)

Query: 336 MRPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCF 395
           +RPP++Y+ LI  AI  AP ++ TL++IY +    F F++   A W+N+IRHNLSL+ CF
Sbjct: 101 VRPPYSYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCF 160

Query: 396 VRVESE-----KGAVWTV--------DELEFRKKRSQR 420
            +V  +     KG  WT+        D   FR+KR +R
Sbjct: 161 KKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRR 198


>gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]
          Length = 457

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 5/81 (6%)

Query: 333 FHNMRPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLH 392
           + + +PP++Y +LI  AI ++P K  TL+EIY W   +F F+R +   W+N+IRH+LS +
Sbjct: 155 YTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFN 214

Query: 393 KCFVRV-----ESEKGAVWTV 408
            CF++V     +  KG+ WT+
Sbjct: 215 DCFLKVPRSPDKPGKGSFWTL 235


>gi|21618327 forkhead box I1 isoform a [Homo sapiens]
          Length = 378

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 13/98 (13%)

Query: 336 MRPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCF 395
           +RPP++Y+ LI  AI  AP+K+ TL++IY +    F F+    A W+N+IRHNLSL+ CF
Sbjct: 122 VRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCF 181

Query: 396 VRVESE-----KGAVWTV--------DELEFRKKRSQR 420
            +V  +     KG  WT+        D   FR+KR ++
Sbjct: 182 KKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRK 219


>gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]
          Length = 463

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 5/81 (6%)

Query: 333 FHNMRPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLH 392
           + + +PP++Y +LI  AI ++P K  TL+EIY W   +F F+R +   W+N+IRH+LS +
Sbjct: 161 YTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFN 220

Query: 393 KCFVRV-----ESEKGAVWTV 408
            CF++V     +  KG+ WT+
Sbjct: 221 DCFLKVPRSPDKPGKGSFWTL 241


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,179,860
Number of Sequences: 37866
Number of extensions: 1164289
Number of successful extensions: 6792
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 208
Number of HSP's that attempted gapping in prelim test: 6150
Number of HSP's gapped (non-prelim): 791
length of query: 431
length of database: 18,247,518
effective HSP length: 105
effective length of query: 326
effective length of database: 14,271,588
effective search space: 4652537688
effective search space used: 4652537688
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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