Guide to the Human Genome
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Name: FOXE3 Sequence: fasta or formatted (319aa) NCBI GI: 11386197
Description:

forkhead box E3

Referenced in:

FOX Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            18.5         59           5
 C cysteine            1.3          4           2
 D aspartate           3.1         10           1
 E glutamate           4.1         13           2
 F phenylalanine       4.1         13           1
 G glycine             8.8         28           1
 H histidine           0.9          3           1
 I isoleucine          1.6          5           1
 K lysine              1.9          6           1
 L leucine            10.0         32           2
 M methionine          1.3          4           1
 N asparagine          2.2          7           1
 P proline            19.1         61           3
 Q glutamine           1.6          5           1
 R arginine            8.5         27           5
 S serine              5.0         16           1
 T threonine           1.9          6           1
 V valine              2.5          8           1
 W tryptophan          0.6          2           1
 Y tyrosine            3.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box E3 
FOXE1                 0.343   forkhead box E1 
FOXD2                 0.288   forkhead box D2 
FOXD1                 0.272   forkhead box D1 
FOXD4L1               0.249   forkhead box D4-like 1 
FOXD4L3               0.243   forkhead box D4-like 3 
FOXD4                 0.243   forkhead box D4 
FOXD4L2               0.243   forkhead box D4-like 2 
FOXD4L6               0.243   forkhead box D4-like 6 
FOXD4L4               0.243   forkhead box D4-like 4 
FOXC1                 0.241   forkhead box C1 
FOXD4L5               0.241   forkhead box D4-like 5 
FOXD3                 0.233   forkhead box D3 
FOXC2                 0.225   forkhead box C2 
FOXA3                 0.225   forkhead box A3 
FOXL2                 0.218   forkhead box L2 
FOXS1                 0.214   forkhead box S1 
FOXL1                 0.213   forkhead box L1 
FOXI2                 0.205   forkhead box I2 
FOXI3                 0.203   forkhead box I3 
FOXQ1                 0.200   forkhead box Q1 
FOXA1                 0.200   forkhead box A1 
FOXA2                 0.199   forkhead box A2 isoform 2 
FOXA2                 0.199   forkhead box A2 isoform 1 
FOXB1                 0.194   forkhead box B1 
FOXB2                 0.194   forkhead box B2 
FOXI1                 0.183   forkhead box I1 isoform a 
FOXF2                 0.180   forkhead box F2 
FOXF1                 0.178   forkhead box F1 
LOC651986             0.169   PREDICTED: similar to forkhead box L2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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