Guide to the Human Genome
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Name: FOXP4 Sequence: fasta or formatted (667aa) NCBI GI: 29789367
Description:

forkhead box P4 isoform 2

Referenced in:

FOX Family

Other entries for this name:
alt prot [680aa] forkhead box P4 isoform 1
alt prot [678aa] forkhead box P4 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         58           3
 C cysteine            1.0          7           1
 D aspartate           3.1         21           2
 E glutamate           6.1         41           3
 F phenylalanine       2.2         15           1
 G glycine             7.0         47           3
 H histidine           2.8         19           2
 I isoleucine          1.3          9           1
 K lysine              3.3         22           2
 L leucine            11.1         74           2
 M methionine          2.5         17           2
 N asparagine          3.4         23           2
 P proline             9.7         65           2
 Q glutamine          10.8         72           4
 R arginine            4.2         28           3
 S serine             10.0         67           3
 T threonine           5.1         34           2
 V valine              4.8         32           2
 W tryptophan          0.7          5           1
 Y tyrosine            1.6         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   forkhead box P4 isoform 2 
FOXP4                 0.989   forkhead box P4 isoform 1 
FOXP4                 0.983   forkhead box P4 isoform 3 
FOXP2                 0.537   forkhead box P2 isoform I 
FOXP2                 0.510   forkhead box P2 isoform II 
FOXP1                 0.500   forkhead box P1 isoform 1 
FOXP2                 0.459   forkhead box P2 isoform III 
FOXP3                 0.148   forkhead box P3 isoform b 
FOXP3                 0.148   forkhead box P3 isoform a 
FOXK2                 0.053   forkhead box K2 
FOXA3                 0.049   forkhead box A3 
FOXK1                 0.049   forkhead box K1 
FOXF1                 0.048   forkhead box F1 
FOXJ1                 0.048   forkhead box J1 
FOXJ3                 0.048   forkhead box J3 
FOXC2                 0.048   forkhead box C2 
FOXG1                 0.048   forkhead box G1 
FOXO3                 0.047   forkhead box O3A 
FOXO3                 0.047   forkhead box O3A 
FOXD3                 0.047   forkhead box D3 
FOXJ2                 0.046   forkhead box J2 
FOXD1                 0.046   forkhead box D1 
FOXA2                 0.044   forkhead box A2 isoform 2 
FOXN3                 0.044   checkpoint suppressor 1 isoform 1 
FOXN3                 0.044   checkpoint suppressor 1 isoform 2 
FOXA2                 0.044   forkhead box A2 isoform 1 
FOXA1                 0.043   forkhead box A1 
FOXF2                 0.043   forkhead box F2 
FOXC1                 0.042   forkhead box C1 
LOC100131908          0.042   PREDICTED: similar to forkhead box O6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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